Alavi S. M. 2022. Bioeconomy: a new economic paradigm in the era of global challenges and complexities. IJBio, 6(11): 1-25

Alavi S. M. 2022. Transition to bioeconomy. Paper presented as invited speaker at the the 22^nd National and 10^th International Congress on Biology, 31 August to 2 September 2022, Shahrekord University, Shahrekord, IRAN

Alavi S. M. 2022. Biology: the science that will be the origin of the wealth of nations. Paper presented as invited speaker at the the 22^nd National and 10^th International Congress on Biology, 31 August to 2 September 2022, Shahrekord University, Shahrekord, IRAN

Alavi S. M., Habibi-Rezaei M. 2022. Bioecinomy: an impending economic Revolution but not a political one. Name-ye-Oloom-e Paye, 4: 32-60

Kazemzadeh-Beneh H., Samsampoor D., Safarnejad M. R. and Alavi S. M. 2022. Optimizing purification processes of recombinant outer membrane protein (OMP) of Candidatus Liberibacter asiaticus causing agent of citrus greening. Agricultural Biotechnology Journal 14 (1), 175-196. DOI: 10.22103/jab.2022.18684.1361

Raeisi H., Safarnejad M. R., Alavi S. M., Farrokhi N., Elahinia S. A. 2022. Transient expression of an scFvG8 antibody in plants and characterization of its effects on the virulence factor pthA of Xanthomonas citri subsp. Citri. Transgenic Res., doi: 10.1007/s11248-022-00301-1.

Kazemzadeh-Beneh H., Samsampoor D., Safarnejad M. R. and Alavi S. M. 2022. Solubilization abd refolding techniques to attain Candidatus Liberibacter asiaticus OMP protein from inclusion bodies. Plant Cell Biotechnology and Molecular Biology 23(5&6):15-25; 2022

Javid P., Behzadi S., Farrokhi N., Bakhtiarizadeh M. R., Alavi S. M., Ranjbar M. S. Evaluation of Hsp70 gene expression in coral reef (Acropora downingi (Wallace, 1999) in response to heat stress. 2021. 11(1): 36-44

Darvishi N., Alavi S. M. and Hijazi Hachem M. 2021. CRISPR- mediated Mutation in Cinnamoyl- CoA Reductase 4 (CsCCR4), in Allohexaploid Oilseed Crop Camelina sativa, Revealed Its Pivotal Role in Resistance against Sclerotinia sclerotiorum. Iran. J. Biotechnol. 19 (4): e2768, https://doi. 10.30498/ijb.2021.230722.2768

Ansari S., Mousavi A., Safarnejad M. R., Farrokhi N., Alavi S. M., Schillberg S., Nölke G. 2021. Selection and characterization of two monoclonal antibodies specific for the Aspergillus flavus major antigenic cell wall protein Aflmp1. Fungal Biology, https://doi.org/10.1016/j.funbio.2021.03.004.

Bahari A., Alavi S. M., Saberi E., Azadvar M. and Shams-Bakhsh M. 2021. Seasonal variation of Candidatus Liberibacter asiaticus population in Citrus trees in southeast of Iran. Eur J Plant Pathol, https://doi.org/10.1007/s10658-021-02202-1

Darvishi N., Sabri M. and Alavi S. M. 2020. Toward evaluation of the monolignol biosynthesis gene network with contemplation on the role of cinnamoyl coA reductase (CCR) gene family in camelina sativa. Agricultural Biotechnology Journal 12 (4): 101-124. DOI: 10.22103/jab.2020.16043.1245

Javid P., Farrokhi N., Behzadi S., Bakhtiarizadeh M. R., Alavi S. M., Ranjbar M. S. 2020. Genetic Variation in Response to Global Warming in a Coral Reef Species, Porites lobate. Avicenna J Environ Health Eng. 7 (1): 29-34

Hooshmand S. A., Zarei Ghobadi M., Hooshmand S. E., Aminzadeh Jamalkandi S., Alavi S. M., Masoudi‑Nejad A. 2020. A multimodal deep learning-based drug repurposing approach for treatment of COVID-19. Molecular Diversity, https://doi.org/10.1007/s11030-020-10144-9

Hooshmand S. A., Aminzadeh Jamalkandi S., Alavi S. M., Masoudi‑Nejad A. 2020. Distinguishing drug/non‑drug‑like small molecules in drug discovery using deep belief network. Molecular Diversity, https://doi.org/10.1007/s11030-020-10065-7

Moravej R., Alavi S. M., Azin M., Salmanian A. 2020. Production and physicochemical characterization of xanthan gum by native lactose consuming isolates of Xanthomonas citri subsp. Citri. The Ukrainian Biochemical Journal, 92 (1): 92-102. DO  - 10.15407/ubj92.01.092

Moravej R., Alavi S. M., Azin M., Salmanian A. 2019. Production of Xanthan Gum by the Native Strain of Xanthmonas Citri in Whey Medium and Evaluation of its Physicochemical Properties. Biological Journal of Microorganism, 8 (30): 69-79.

Raeisi H., Safarnejad M. R., Alavi S. M., Farrokhi N., Elahinia S. A., Safarpour H., Sharifian F. 2019. Development and molecular analyses of Xanthomonas pthA specific scFv recombinant monoclonal antibodies JCP. 8 (4) :417-429, URL: http://journals.modares.ac.ir/article-3-33200-en.html

Raeisi H., Safarnejad M. R., Alavi S. M., Elahinia S. A., Farrokhi N. 2019. Applying the pthA effector protein of Xanthomonas citri subsp. citri for production of specific antibodies and its application for detection of infected plants. Journal of Plant Pathology 102 (3): https://doi.10.1007/s42161-019-00385-5

Saeinia A. H., Taghizadeh M. and Alavi S. M. 2019. Investigating Dynamic Properties of Residues of Warfarin-Azapropazone Binding Site in Human Serum Albumin. Journal of Health and Biomedical Informatics: 6 (3): 255-263

Raeisi H., Safarnejad M. R., Alavi S. M., Elahinia S. A., Farrokhi N. 2018. Production of polyclonal phages harbouring antibody fragment genes against Xanthomonas citri subsp. citri using phage display technology. Applied Entomology and Phytopathology 85 (2): 10.22092/JAEP.2017.115980.1194., 265 - 276

Saberi E., Alavi S. M., and Safaie N. 2018. Diversity and characterization of Candidatus Liberibacter asiaticus strains causing huanglongbing disease in Iran, based on two prophage loci. J Phytopathol. 00: 1–10.

Behzadi F., Darouie S., Alavi S. M., Shariati P., Singh G., Dolatshahi-Pirouz A. and A. Arpanaei. 2018. Stability and Antimicrobial Activity of Nisin-Loaded Mesoporous Silica Nanoparticles: A Game-Changer in the War against Maleficent Microbes. J. Agric. Food Chem. 66. 10.1021/acs.jafc.7b05492.

Soheilivand S., Mousavi A., Safarnejad M. R., Farrokhi N., Mardi M., Tohidfar M. and S. M. Alavi. 2018. Factors Affecting Successful Ex vitro Microgragfting of Sour Lime (Citrus aurantifolia) in Order to Rescue Rootless Shoots. Iranian Journal of Horticultural Science, accepted for publication.

Rasoulnia A., Alavi S. M., Askari H., Farrokhi N. and Soltani Najafabadi M. 2018. Effect of Xanthomonas citri subsp. citri infection on chlorophyll pigment content, chlorophyll fluorescence and proteins change in Citrus aurantifolia. Journal of Agricultural Science and Technology, 20 (3): 571-582

Gholami D., Aminzadeh S., Alavi S. M., Kazemipour N. and Ghoroghi A. 2018. Compariison of antibiiottiics and bacteriocins antibacterial activity on Xanthomonas citri subsp. citri. Iranian Journal of Fisheries Sciences, 17, 1: 162-178.

Soheilivand S., Mousavi A., Safarnejad M. R., Farrokhi N., Mardi M., Tohidfar M. and S. M. Alavi. 2017. Imposed starvation for in vitro maintenance and high regeneration of elite key lime (Citrus aurantifolia). The Journal of Horticultural Science and Biotechnology, DOI: 0.1080/14620316.2017.1415702

Saberi E., Alavi S. M., Safaie N and Moslemkhany C. 2017. Bacterial pathogens associated with citrus Huanglongbing-like symptoms in southern Iran. J. Crop Prot., 6 (1): 99-113.

Jalali A., Alavi S. M. and Sangtarash M. H. 2017. Comparative genomic analysis of wide and narrow host range strains of Xanthomonas citri subsp. citri, showing differences in the genetic content of their pathogenicity and virulence factors. Australasian Plant Pathol, 46(1): 49-61, DOI 10.1007/s13313-016-0462-z

Bahari A, Alavi S. M., Shams-Bakhsh M. and Saberi E. 2016. First report of a 16SrII group related phytoplasma associated with witches' broom of Cupressus sempervirens var. horizontalis in Iran. New Disease Reports 34, 21.

Kazemzadeh S., Farrokhi N., Aminzadeh S., Alavi S. M., Sarpele A. and Mamarabadi M. 2015. Antimicrobial effects of Trichoderma harzianum crude extract and its efficacy in biocontrol. Journal of cellular and Molecular Research, 28 (1): 107-114

Gholami D., Goodarzi T., Aminzadeh S., Alavi S. M., Kazemipour N. and Farrokhi N. 2015. Bacterial Secretome Analysis in Hunt for Novel Bacteriocins with Ability to Control Xanthomonas citri subsp. citri. Iranian Journal of Biotechnology, 13 (3): 10-19.

Pruvost O., Goodarzi T., Boyer K., Soltaninejad H., Escalon A., Alavi S. M., Javegny S., Boyer C., Cottyn B., Gagnevin L. and Vernière C. 2015. Genetic structure analysis of strains causing citrus canker in Iran reveals the presence of two different lineages of Xanthomonas citri pv. citri pathotype A*. Plant pathology, 64 (4): 776–784

Kazemzadeh S., Farrokhi N., Aminzadeh S., Alavi S. M., Sarpelleh A. and Mamarabadi M. 2015. Antimicrobial effects of Trichoderma harzianum crude extract and its efficacy in biocontrol. Journal of Cellular and Molecular Researches, 28 (1), 107-114.

Mokhtari M., Safarnejad M. R., Alavi S. M., and Torkmanzehi A. 2015. Isolation, expression and protein production of an effector gene in Xanthomonas citri pv. citri, causative agent of citrus canker disease. Journal of Agriculture Biotechnology, 7 (2): 155-170.

Kazemzadeh S., Farrokhi N., Aminzadeh S., Alavi S. M., Masoodi A., Mamarabadi M. and Goodarzi T. 2014. Biocontrol of causative agent of citrus canker disease using antimicrobial substances produced by Aspergillus awamori K-03. Biological Journal of Microorganism, 11, 91-98

Hasabi V., Askari H., Alavi S. M., Goodarzi T., Soltani Najafabadi M. and Zamanizadeh H. 2014. Inhibitory impacts of plant nutritional compounds on Xanthomonas citri subsp. citri, the causal agent of bacterial canker of citrus. Journal of Plant Pathology 96 (2), 369-375.

Hasabi V., Askari H., Alavi S. M., and Soltani Najafabadi M. 2014. In Vitro and In Vivo Antibacterial Activity of Some Organic and Inorganic Salts against Asiatic Citrus Canker Agent Xanthomonas citri subsp. citri. Turkish Journal of Agriculture - Food Science and Technology, 2(6): 296-300

Hasabi V., Askari H., Alavi S. M., and Zamanizadeh H. 2014. Effect of amino acid application on induced resistance against citrus canker disease in lime plants. Journal of Plant Protection Research, 54 (2): 144-149

Patpour M., Nazari K., Ogbonnaya F., Alavi .S. M., and Mousavi A. 2014. Identification and evaluation of resistance to dominant races of stem rust in Iranian wheat cultivars. Seed and Plant Improvement Journal, 30 (1) 133-154.

Gholami D., Aminzadeh S., Alavi S. M., Kazemipour N., Valizadeh J. and Goodarzi T. 2014. Identification and studying of Enterobacter sp. DGH3 antibacterial activity. Iranian Journal of Biology, 27 (2): 269-276

Gholami D., Aminzadeh S., Alavi S. M., Goodarzi T., Kazemipour N. and Valizadeh J. 2014. Isolation and Identification of the first indigenous bacterial strain against Xanthomonas citri subsp. citri, causal agent of citrus canker disease. Iranian Journal of Biology, 27 (1): 111-118

Hasabi V., Askari H., Alavi S. M., Soltani Najafabadi M. and Zamanizadeh H. 2013.The effect of amino acid Methionine on β- 1,3 glucanase gene expression and activity of effective enzymes in induced resistance to citrus canker disease in lime. Plant Protection Journal, 6 (1): 149-161

Rasoulnia A., Alavi S. M., Askari H., Farrokhi N. and Soltani Najafabadi M. 2013. Antioxidant activity and lipid peroxidation in response to citrus canker bacterial infection. International Journal of Farming and Allied Sciences, 2 (24): 1179-1184

Patpour M., Nazari K., Ogbonnaya F., Alavi .S. M., and Mousavi A. 2014. Phenotypic and molecular characterization of resistance to stem rust in wheat cultivars and advanced breeding lines from Iran and Syria. Crop Breeding journal, 4 (1): 1-14

Samadlouie H., Hamidi-Esfahani Z., Alavi S. M., and Varastegani B. 2014. Expression analysis for genes involved in arachidonic acid biosynthesis in Mortierella alpina CBS 754.68. Brazilian Journal of Microbiology 45 (2): 439-445

Ezzati-Tabizi R., Talaei-Hassanloui R., Farrokhi N., Hossininaveh V. and S. M. Alavi. 2013. Haemolymph Phenoloxidase Activity of Larval Plodia interpunctella and Galleria mellonella in Response to Beauveria Bassiana and Pseudomonas Fluorescens. IJAIR, 2 (2): 217-220

Ezzati-Tabrizi R., Farrokhi N., Talaei-Hassanloui R., Alavi S. M., Hosseininaveh V. 2013. Insect Inducible Antimicrobial Peptides and Their Applications. Current Protein and Peptide Science, 14, 698-710

Kafil M., Bandani A. R., Kaltenpoth M., Goldansaz S. H., Alavi S. M. 2013. Role of symbiotic bacteria in the growth and development of the Sunn pest, Eurygaster integriceps. Journal of Insect Science 13 (99), 1-12.

Ramezani A., Alavi S. M., Salmanian A., and Jafari M. 2013. The screening of xanthomonas lactose – positive strains among bacterial populations of citrus canker disease isolated from Iran. BJM. 2 (6) :19-30

Ramezani A., jafari M., Goodarzi T., Alavi S. M., Salmanian A. H., Azin M. 2013. Lactose consuming strains of Xanthomonas citri subsp. citri (Xcc) insight into the emergence of natural field resources for xanthan gum production. World Journal of Microbiology and Biotechnology, 30 (5): 1511-1517.

Samadlouie H., Hamidi Z., Alavi S. M., Sahari M. A. and Abbasi S. 2013. Investigation of Metabolism of Mortierella alpina in optimal condition for oil and arachidonic acid production Using Response Surface Methodology (RSM). Iranian Journal of Food Sciences and Technology, 45 (11): 85-96.

Parchami N., Mozdoori N., Alavi S. M. and Askari H. 2013. Analyses of Iranian Xcici A*-type strain of citrus bacterial canker disease. Iranian journal of Agronomy and Plant Breeding, 9 (3): ???

Roohani R., Soltani Najafabadi M., Alavi S.M., Farrokhi N. and Shamsbakhsh M. 2012. Transcript analysis of some pathogenicity-related elements in an Iranian A* isolate of Xanthomonas citri subsp. citri. J. Crop Prot. 1 (4): 337-347

Mozdoori N., Parchami N., Kazemipour N., Alavi S. M. and Valizadeh J. 2012. Assessment of Secretome Sample Preparation from A*-type Strains of Xanthomonas citri subsp. citri for Two-dimensional Electrophoresis. Journal of Progress in Biological Sciences. 2 (1): 87-94

Samadlouie H., Hamidi-Esfahani Z., Alavi S. M., Soltani-Najafabadi M., Sahari M. A. and Abbasi S. 2012. Statistical approach to optimization of fermentative production of oil and arachidonic acid from Mortierella alpine CBS 754.68. African Journal of Microbiology Research. 6 (7): 1559-1567

Alavi S. M., Sanjari S., Durand F., Brin C., Manceau C. and S. Poussier. 2008. Assessment of the genetic diversity of Xanthomonas axonopodis pv. phaseoli and Xanthomonas fuscans subsp. Fuscans as a basis to identify putative pathogenicity genes and a type III secretion system of the SPI-1 family by multiple suppretion subtractive hybridization. Applied and Environmental Microbiology, 74 (10), 3295-3301

Alavi S. M., Poussier S., and C. Manceau. 2007. Characterization of ISXax1, a novel insertion sequence restricted to Xanthomonas axonopodis pv. phaseoli (variants fuscans and non-fuscans) and Xanthomonas axonopodis pv. vesicatoria. Applied and Environmental Microbiology. 73 (5). 1678-1682

Behzadi F., Arpanaei A., Alavi S. M., Shariati P., and Esmaeilnejad-Aharanjani P. 2015. Preparation and study of antibacterial properties of nisin-loaded mesoporous silica nanoparticles. 1th International and 9^th national biotechnology congress of Islamic republic of iran, 24-26 May, Tehran, Iran

Ramezani M., Farrokhi N., Safarnejad R., Alavi S. M., and Gharanjik S. 2015. Transient expression of aptamer to prevent symptom of canker. 1th International and 9^th national biotechnology congress of Islamic republic of iran, 24-26 May, Tehran, Iran

Ramezani M., Farrokhi N., Safarnejad R., Alavi S. M., and Gharanjik S. 2015. Affinity of pthA protein with Aptamer. 1th International and 9^th national biotechnology congress of Islamic republic of iran, 24-26 May, Tehran, Iran

Riahi P., Nasoodian Shalchi F., Zare B., Alavi S. M., Farrokhi N., and Aminzadeh S. 2015. Cloning and Molecular Confirmation of Lipase gene from Xanthomonas citri Subsp. citri. 1th International and 9^th national biotechnology congress of Islamic republic of iran, 24-26 May, Tehran, Iran

Saberi E., Alavi S. M., Safaie N., Moslemkhany C., and Shariaty V. 2015. Simultaneous detection of three destructive prokaryotic pathogens of citrus by multiplex nested PCR assay. 1th International and 9^th national biotechnology congress of Islamic republic of iran, 24-26 May, Tehran, Iran

Saberi E., Alavi S. M., Azadvar M., and Bahari A. 2015. DNA Extraction Protocol for detection of Huanglongbing, a destructive and new emergence of citrus disease in Iran. 1th International and 9^th national biotechnology congress of Islamic republic of iran, 24-26 May, Tehran, Iran

Saberi E., Alavi S. M., Safaie N., Moslemkhany C., Shariaty V. and Azadvar M. 2015. Population Structures of ‘Candidatus Liberibacter asiaticus’ In Southern Iran. 1th International and 9^th national biotechnology congress of Islamic republic of iran, 24-26 May, Tehran, Iran

Soheilivand S., Safarnegad M. R., Mousavi A., Alavi S. M., Mardi M., Farrokhi N. and Tohidfar M. 2015. Optimization of micrografting of Mexican lime in vitro derived rootless shoots on in vivo rootstock. 1th International and 9^th national biotechnology congress of Islamic republic of iran, 24-26 May, Tehran, Iran

Soheilivand S., Mousavi A., Safarnegad M. R., Farrokhi N., Alavi S. M., Mardi M., and Tohidfar M. 2015. Gene transferring to Mexican lime explants (Citrus aurantifolia L.) using bar selectable marker. 1th International and 9th national biotechnology congress of Islamic republic of iran, 24-26 May, Tehran, Iran

Esmaeilnejad-Ahranjani P., Arpanaei A., Alavi S. M., and Behzadi F. 2014. Improvement of Lysozyme Antibacterial Characteristics by Covalent Immobilization onto Mesoporous Silica Nanoparticles. 2nd International Conference on Nanotechnology, 9-11 July, Istanbul, Turkey.

Kazemzadeh S., Farrokhi N., Alavi S. M., and SoltaniNajafabadi M. 2012. Bioinformatic comparison of bacterial antimicrobial peptides. 4^th bioinformatic congress, 6-7 Nov., Tehran, Iran.

Soheilivand S., Mousavi A., Safarnegad M. R., Tohidfar M., Mardi M., Farrokhi N., Alavi S. M. and Shahmirzaie M. 2012. Introduction of a simple and rapid method for micropropagatiom of lime (Citrus aurantifolia) by means of tissue culture. The 17^th National and 5^th international Biology Conference, 5-7 Sep., Kerman, Iran.

Kazemzadeh S., Farrokhi N., Aminzadeh S., Alavi S. M., Mamarabadi M. and Gharanjik S. 2012. Isolation, detection and study of antagonistic effect of some fungi crud extracts against Xanthomonas citri subsp. citri. 3^rd Iranian Agricultural Biotechnology Congress, 3-5 Sep., Mashad, Iran.

Soheilivand S., Safarnegad M. R., Mousavi A., Mardi M., Farrokhi N., Alavi S. M. Tohidfar M., and Shahmirzaie M. 2012. Study on clusters of nucleic acid and amino acid sequences which are similar to IMP of WBDL. The 17^th National and 5^th international Biology Conference, 5-7 Sep., Kerman, Iran.

Kazemzadeh S., Farrokhi N., Aminzadeh S., Alavi S. M., Goodarzi T. Mamarabadi M. and Gharanjik S. 2012. Isolation, detection and study of antagonistic effect of some fungal extracts on Xanthomonas citri subsp. citri, causal agent of citrus bacterial canker disease. The 3rd Iranian Agricultural Biotechnology Congress, 3‐5 Sep., Mashad, Iran

Kafil M., Alavi S. M., and Bandani Ali R. 2012. Molecular Identification of ovary symbiont of Sunn pest, Puton (Hemiptera: Scutelleridae)Eurygaster integriceps. 20^th Iranian Plant Protection Congress, 25-28 August, Shiraz, Iran.

Kafil M., Alavi S. M., and Bandani Ali R. 2012. Gut bacteria of the Sunn pest, Eurygaster integriceps Puton (Hemiptera: Scutelleridae). 6^th European Hemiptera Congress, 25-29 June, Blagoevgrad, Bulgaria.

Kafil M., Bandani Ali R. and Alavi S. M. 2012. Eurygaster integriceps Puton (Hemiptera: Scutelleridae) symbiotic bacteria affect its growth and development. 6^th European Hemiptera Congress, 25-29 June, Blagoevgrad, Bulgaria.

Gholami D., Aminzadeh S., Kazemipour N., Valizadeh J., Alavi S. M. and Emruzi Z. 2012. Isolation and purification of protein and peptide from gel polyacrylamide. 12^th Iranian Genetic Congress, 22-24 May, Tehran, Iran

Gholami D., Aminzadeh S., Kazemipour N., Alavi S. M. and Emruzi Z. 2012. Recognition testing for a novel bacteriocin produced by native serratia marcescens DGH1. 1^st Biotechnology World Congress, 14-15 Feb., Dubai, UAE.

Parchami N., Mozdoori N., Goodarzi T., Alavi S. M., Askari H., and Kazemipour N. 2011. Proteomap of an Iranian strains of Xanthomonas citri subsp. citri A*-type. The 7^th National Biotechnology congress of Iran. 12-14 Sep. Tehran, Iran

Ramezani A., Alavi S. M. Salmanian, A. H. and Soudi M. R. 2011. Screening and Isolation of lactose-consuming strains of Xanthomonas citri subsp. citri to use in whey containing medium. The 7^th National Biotechnology congress of Iran. 12-14 Sep. Tehran, Iran

Tavallaei, M., Noroozi P., ..., Alavi S. M., Alavi S., …, and HashemiSohi H. 2011. Evaluation and analysis of biotechnology status in Iran. The 7^th National Biotechnology congress of Iran. 12-14 Sep. Tehran, Iran

Rohani R., SoltaniNajafabadi M., Alavi S. M. and Shamsbakhsh M. 2011. In vivo gene expression analysis of Xanthomonas citri subsp. citri causative agent of bacterial citrus canker disease. The 2^nd National Biology Congress of Researchers, 4-7 March., Tehran, Iran

Soltaninejad H., Parchami N., Alavi S. M. and A. Ghasemi. 2011. Analysis of genetic diversity among Iranian strains of Xanthomonas citri subsp. citri, causal agent of bacterial citrus canker, using rep-PCR molecular markers. The 2^nd National Biology Congress of Researchers, 4-7 March., Tehran, Iran

Rohani R., SoltaniNajafabadi M., Alavi S. M. and Shamsbakhsh M. 2011. Quantitative expression of genes involved in pathogenicity of Xanthomonas citri subsp. citri in response to host plant cells. The 2^nd National Conference of Applied Microbiology, 16-17 Feb., Tehran, Iran

Soltaninejad H., Parchami N., Alavi S. M. and A. Ghasemi. 2010. A narrow genetic variation is detectable among Iranian strains of Xanthomonas citri subsp. citri, causal agent of bacterial citrus canker. 12th International Conference of Plant Pathogenic Bacteria, June 7th-11th, La Reunion, France

Najme Mozdoori , Neda Parchami , Nasrin Kazemipour and S. M. Alavi. 2010. Differentially expressed of secreted proteins of the phytopathogenic bacterium Xanthomonas citri pv. citri in interaction with host plant extract. The third Iranian proteomics congress, 26-27 May, Tehran, Iran

Alavi S. M., et al. 2009. Epidemiological survey and population structure of Xanthomonas citri pv. citri, causal agent of citrus bacterial canker disease. International Workshop on Pathogens that affect agriculture productivity. 1-2 October, Santiago-Chile

Alavi S. M., Irani S. and A. Ghasemi. 2009. Genetic diversity investigation among Iranian strains of Xanthomonas citri pv. citri, causal agent of Asiatic citrus canker disease. The 6^th National Biotechnology Congress of Iran. 13-14 August, Tehran-Iran

Alavi S. M., Sanjari S., Brin C., Manceau C. and S. Poussier. 2007. Identification of virulence and host specificity gene candidates in Xanthomonas axonopodis pathovar phaseoli by using suppression subtractive hybridizations. Poster presented in 13^th International congress on Molecular Plant-Microbe Interaction, July 21-28, Sorrento-Italy

Alavi S. M., Sanjari S., Poussier S., and C. Manceau. 2007. Pathogenicity and host specific molecular determinants of Xanthomonas axonopodis pv. phaseoli and its fuscans variant. Proceedings of 5^th National Biotechnology Congress of Iran. P 119.

Alavi S. M., Poussier S., and C. Manceau. 2005. Characterization of a specific insertion sequence element within Xanthomonas axonopodis pathovar phaseoli and study of its role in pathovar phaseoli/Phaseolus sp. Interaction. Poster presented in the XII international congress on Molecular Plant Microbe Interaction, Merida, Mexico

Alavi S. M., Poussier S., and C. Manceau. 2005. Genetic characterization of Xanthomonas axonopodis pv. phaseoli responsible of common bacterial blight of bean. 5^th International Seed Health Symposium, Angers, France.

Alavi S. M., Poussier S., and C. Manceau. 2005. ISXax1, a new specific insertion sequence in Xanthomonas axonopodis pv. phaseoli casual agent of common bacterial blight of bean (Phaseolus vulgaris L.). Poster presented in the 5^th national plants-microbe interaction meeting, Toulouse, France

Alavi S. M., Poussier S., and C. Manceau. 2004. Genetic characterization of Xanthomonas axonopodis pv. phaseoli casual agent of common bacterial blight of bean (Phaseolus vulgaris L.). Poster presented in the 6^th plants-bacteria meeting. Aussois, France

Alavi S. M., Fakhre Tabatabaei S. M., KhoshKholgh Sima N. A., and M. Shahriari. 2001. Molecular classification of Iranian wild wheat genotypes by using of RAPD markers. Proceeding of the second national congress of biotechnology. Vol. 1, pp: 208-213, Karaj, IRAN

Shahriari M., Nankali A., Alavi S. M., and B. Ghareyazie. 2001. Genetic diversity of Iranian olive (Olea uropaea) germplasme using RAPD markers. Proceeding of the second national congress of biotechnology, Vol. 1, pp: 227-232

Alavi S. M., Paknyat H., Nematzadeh G. A., and B. Ghareyazie. 2000. Linkage Determination between RAPD markers and gelatinization temperature (GT) gene in rice (Oryza sativa L.). Proceeding of the first national congress of biotechnology, Vol. 1, pp: 157-164

Malboobi M. A., Alavi S. M. and B. Ghareyazie. 1999. Biotechnology, a world ongoing technology. International Workshop on Genetic engineering,IROST, Tehran, IRAN

• علوی س. م.، حبیبی رضایی م. 1400. اقتصاد زیستی، انقلابی فراگیر از جنس اقتصادی و نه از گونه سیاسی. نامه علوم‌پایه، شماره 4، 60-32
• رییسی ح.، صفرنژاد م. ر.، علوی س. م.، الهی‌نیا س. ع.، و فرخی ن. 1396. تولید فاژهای پلی‏کلونال حاوی قطعات ژنی آنتی بادی اختصاصی باکتری Xanthomonas citri subsp. citri با استفاده از فن‏آوری نمایش فاژی. شناسه دیجیتال (DOI): 10.22092/jaep.2017.115980.1194
• رسول‌نیا ع.، علوی س. م.، عسکری ح.، فرخی ن.، و سلطانی نجف‌آبادی م. 1396. مطالعه پروتئوم آپوپلاستی لیموترش با استفاده از الکتروفورز دوبعدی در پاسخ به بیماری شانکر باکتریایی. ژنتيک نوين، دوره دوازدهم، شماره 2، 194-185
• عرب ف.، آزادوار م. و علوی س. م. ارزیابی درون شیشه ای واکنش ارقام و بیوتیپ های مختلف لیمو ترش در برابر جدایه های بومی عامل شانکر مرکبات. اولین همايش ملي کشاورزی، محیط زيست و امنیت غذایي. اسفندماه 1393، دانشگاه جیرفت، جیرفت، ایران.
• عرب ف.، آزادوار م. و علوی س. م. ارزیابی درون شیشه ای واکنش ژنوتیپ های مختلف لیموترش نسبت به باکتری عامل شانکر مرکبات. بیست و یکمین کنگره گیاهپزشکی ایران. 4-1 شهریور ماه 1393، دانشگاه ارومیه، ارومیه، ایران.
• روحانی ر.، گودرزی ط.، سلطانی نژاد ح. و علوی س. م. 1392. بررسی تنوع ژنتیکی و مکانیزم بیماریزایی باکتری (Xanthomonas citri subsp. citri (Xcici عامل شانکر باکتریایی مرکبات به لحاظ الزامات پدافندی در برابر تهدیدات بیولوژیک احتمالی. همایش ملی پدافند غیر عامل در بخش کشاورزی. شناسه مقاله: NCPDA01-0123