Mehdi Mohammadi, Mansour  Shahedi, Faezeh Ahrari, Mostafa Mostafavi,  Zohreh Habibi, and Maryam Yousefi, Isocyanide-based multi-component reactions for carrier-free and carrier-bound covalent immobilization of enzymes. Nature Protocols. (2023) 1-17

Mansour Shahedi, Niloofar Omidi, Zohreh Habibi, Behrouz Notash, Mehdi Mohammadi, Biocatalytic stereoselective synthesis of pyrrolidine-2,3-diones containing all-carbon quaternary stereocenters, Organic and Biomolecular Chemistry, (2023) 21(13), 2742–2747

Negin Neissari, Mansour Shahedi, Zohreh Habibi, Hossein Bavandi, Mehdi Mohammadi, Biocatalytic synthesis of oxadiazole thioethers and evaluation of their antitumor activity, Organic and Biomolecular Chemistry, (2023) 21(23), 4846–4853

Kazem Mahmoudzadeh, Zohreh Habibi, Maryam Yousefi, Mostafa Mostafavi, Mehdi Mohammadi, Peptiligase, an enzyme for efficient chemo-enzymatic synthesis of aviptadil, International Journal of Biological Macromolecules, (2023), 127089

Faezeh Ahrari, Maryam Yousefi, Zohreh Habibi, Mehdi Mohammadi,  (2023): Cross-linked lipase particles with improved activity; application of a non-toxic linker for cross-linking. LWT - Food Science and Technology, (2023) 173, 114371.

Mansour Shahedi, Rozina Shahani, Zohreh Habibi, Maryam Yousefi,   Jasper Brask, Arash Minai-Tehrani, Fatemeh Yazdi Samadi, and Mehdi Mohammadi, Diarylation of thiazolo pyrimidins by laccase and their in vitro evaluation as antitumor agents. Scientific reports, (2022) 12:22326-22338

Narges Alikhani, Mansour Shahedi, Zohreh Habibi, Maryam Yousefi Sabriyeh Ghasemi, Mehdi Mohammadi, A multi-component approach for co-immobilization of lipases on silica-coated magnetic nanoparticles: improving biodiesel production from waste cooking oil, Bioprocess and Biosystems Engineering, (2022) 1-18.

Mohamad Reza Safarpoor Moguei, Zohreh Habibi, Mansour Shahedi, Maryam Yousefi, Abouzar Alimoradi, Sepideh Mobini, Mehdi Mohammadi, Immobilization of Thermomyces lanuginosus lipase through isocyanide-based multi component reaction on multi-walled carbon nanotube: application for kinetic resolution of rac-ibuprofen, Biotechnology Reports 35 (2022) e00759.                 

Hosein Bavandi, Mansour Shahedi, Zohreh Habibi, Maryam Yousefi, Jasper Brask, Mehdi Mohammadi, Biocatalytic decarboxylative Michael addition for synthesis of 1, 4-benzoxazinone derivatives, Scientific reports 12 (2022) 1-10.

Faezeh Moosavi, Faezeh Ahrari, Gholamreza Ahmadian, Mehdi Mohammadi, Sortase-mediated immobilization of Candida Antarctica lipase B (CalB) on grapheme oxide; comparison with chemical approach, Biotechnology Reports, 34 (2022) e00733.

Yalda Amini, Mansour Shahedi, Zohreh Habibi, Maryam Yousefi, Maryam Ashjari, Mehdi Mohammadi, A multi-component reaction for covalent immobilization of lipases on amine-functionalized magnetic nanoparticles: production of biodiesel from waste cooking oil, Bioresources and Bioprocessing 60 (2022).

Soha Parsafar, Farhang Aliakbari, Sepide Fatemi, Zahra Najarzadeh, Hamdam Hourfar, Mehdi Mohammadi, Dina Morshedi, Insights into the biological activity and inhibitory mechanism of skullcapflavone II against α-synuclein aggregation and its mediated cytotoxicity, International Journal of Biological Macromolecules, 209 (2022) 426-440.

Faezeh Ahrari, Maryam Yousefi , Zohreh Habibi, Mehdi Mohammadi, Application of Undecanedicarboxylic acid to prepare cross-linked enzymes (CLEs) of Rhizomucor miehei lipase (RML); selective enrichment of polyunsaturated fatty acids, Molecular Catalysis, Volume 520 (2022) 112172.

M Ashjari, M Garmroodi, F Ahrari, M Yousefi, M Mohammadi, Soluble enzyme cross-linking via multi-component reactions: a new generation of cross-linked enzymes, Chem. Comm., 56 (2021) 9683-9686.

G Daneshvari, A.R Yousefi, M Mohammadi, S Banibairami, P  Shariati, A  Rahdar, G.Z Kyzas, Controlled-release Formulations of Trifluralin Herbicide by Interfacial Polymerization as a Tool for Environmental Hazards, Biointerface Research in Applied Chemistry, 11 (2021) 13866 – 13877.

M Shahedi, Z Habibi, M Yousefi, J Brask, M Mohammadi, Improvement of biodiesel production from palm oil by co-immobilization of Thermomyces lanuginosa lipase and Candida antarctica lipase B: Optimization using response surface methodology, International Journal of Biological Macromolecules,  170 (2021) 490-502.

M Yousefi, M Marciello, JM Guisan, G Fernandez-Lorente, M Mohammadi, Fine modulation of the catalytic properties of Rhizomucor miehei lipase driven by different immobilization strategies for the selective hydrolysis of fish oil, Molecules 25 (2020), 545.

S Parsafar, Z Nayeri, F Aliakbari, F Shahi, M Mohammadi, D Morshedi, Multiple neuroprotective features of Scutellaria pinnatifida–derived small molecule, Heliyon, (2020) e04737.

E Memari, A Maghsoudi, F Yazdian, M Yousefi, M Mohammadi, Synthesis of PHB-co-PEI nanoparticles as gene carriers for miR-128-encoding plasmid delivery to U87 glioblastoma cells. Colloids and Surfaces A: Physicochemical and Engineering Aspects, 599 (2020)  124898.

M Ashjari, M Garmroodi, F Amiri Asl, M Emampour, M Yousefi, M Pourmohammadi Lish, Zh Habibi, M Mohammadi, Application of multi-component reaction for covalent immobilization of two lipases on aldehyde-functionalized magnetic nanoparticles; production of biodiesel from waste cooking oil, Process Biochemistry, 90 (2020) 156-167.

H Ahmadi, Z Nayeri, Z Minuchehr, F Sabouni, M Mohammadi, Betanin purification from red beetroots and evaluation of its anti-oxidant and anti-inflammatory activity on LPS-activated microglial cells, Plos one, (2020) e0233088.

Sadeghi Z, Maleki P, Shahabi F,  Bondarkhilli S A M, Masoumi M, Taheri M, Mohammadi M, Raheb J, Surface modification of superparamagnetic iron oxide (SPION) and comparison of cytotoxicity effect of mPEG2000-PEI-SPION and mPEG750-PEI-SPION on the human embryonic carcinoma stem cell, NTERA2 cell line, Human Antibodies, 28 (2020) 159-167.

Davaeifar S, Modarresi MH, Mohammadi M,  Hashemi E, Shafiei M, Maleki H, Vali H, Shahbani Zahiri H, Synthesizing, Characterizing, and Toxicity Evaluating of Phycocyanin-ZnO Nanorod Composites: A Back toward cleaner Approaches, Colloids Surf B Biointerfaces, 175 (2019) 221-230.

Shahedi M, Habibi Z, Yousefi M, Mohammadi M, Co-immobilization of Rhizomucor miehei lipase and Candida antarctica Lipase B and Optimization of biocatalytic biodiesel production from palm oil using response surface methodology, Renewable energy, 141(2019) 847-857.

Z Sadeghi, P Maleki, SAM Bondarkhilli, M Mohammadi, J Raheb, Dataset on cytotoxicity effect of polyethylenimine-functionalized graphene oxide nanoparticles on the human embryonic carcinoma stem cell, NTERA2 cell line, Data in brief 26 (2019) 104487.

Salami F, Habibi Z, Yousefi M, Mohammadi M, Covalent immobilization of laccase by one pot three component reaction and its application for textile dye degradation, International Journal of Biological Macromolecules, 120 (2018), 144-151.

M Mohammadi, A Ramazani, M Garmroodi, M Yousefi, A Yazdi, Resolution of Ibuprofen Enantiomers by Rhizomucor miehei Lipase (RML) Immobilized via Physical and Covalent Attachment, Modares Journal of Biotechnology 10 (2019) 351-361.

Mohammadi M, Habibi Z, Gandomkar S, Yousefi M, A novel approach for bioconjugation of Rhizomucor miehei lipase (RML) onto aminefunctionalized supports; Application for enantioselective resolution of rac-ibuprofen, International Journal of Biological Macromolecules, 117 (2018) 523–531.

Qafari SM, Ahmadian G, Mohammadi M, One-step purification and oriented attachment of Protein A on silica and graphene oxide nanoparticles using sortase-mediated immobilization, RSC Adv., 7 (2017) 56006-56015.

Khodaei S, Ghaedmohammadi S, Mohammadi M, Rigi G, Zadmard R, Ahmadian G, Covalent immobilization of protein A on chitosan and aldehyde double-branched chitosan as biocompatible carriers for IgG purification, Journal of Chromatographic Science, 2018, 1-8.

Mohammadi M, As’habi MA, Salehi P, Yousefi M, Nazari M, Brask J, Immobilization of laccase on epoxy-functionalized silica and its application in biodegradation of phenolic compounds, International Journal of Biological Macromolecules, 109 (2018) 443-447.

Babaki M, Habibi Z, Yousefi M,, Mohammadi M, Process optimization for biodiesel production from waste cooking oil using multi-enzyme systems through response surface methodology, Renewable Energy, 105 (2017), 465–472.

Mehrasbi MR, Mohammadi J, Mohammadi M, Peida M, Covalent immobilization of Candida antarctica lipase on core-shell magnetic nanoparticles for production of biodiesel from waste cooking oil, Renewable Energy, 101 (2017) 593-602.

Mohammadi M, Ashjari M, Garmroodi M, Yousefi M, Karkhane AA, The use of isocyanide-based multicomponent reaction for covalent immobilization of Rhizomucor miehei lipase on multiwall carbon nanotubes and graphene nanosheets

RSC Advances, 6 (2016), 72275-72285

Mohammadi M, Gandomkar S, Habibi Z, Yousefi M, One pot three-component reaction for covalent immobilization of enzymes: application of immobilized lipases for kinetic resolution of rac-ibuprofen, RSC Advances, 6 (2016), 52838-52849.

Babaki M, Yousefi M, Habibi Z, Mohammadi M, Yousefi P, Mohammadi J, Enzymatic production of biodiesel using lipases immobilized on silica nanoparticles as highly reusable biocatalysts: effect of water, t-butanol and blue silica gel contents, Renewable Energy, 91(2016) 196-206

Garmroodi M, Mohammadi M, Ramazani A, Ashjari M, Yousefi M, Mohammadi J, Sabour B, Covalent binding of hyper-activated Rhizomucor miehei lipase on hetero-functionalized siliceous supports, International Journal of Biological Macromolecules, 86 (2016) 208–215.

Gandomkar S, Habibi Z, Mohammadi M, Maryam Yousefi, Masoomeh Salimi, S.Enantioselective resolution of racemic ibuprofen esters using different lipases immobilized on epoxy-functionalized silica, Biocatalysis and Agricultural Biotechnology, 4 (2015) 550-554.

Ashjari M, Mohammadi M, Badri R, Selective concentration of eicosapentaenoic acid and docosahexaenoic acid from fish oil with vimmobilized/stabilized preparations of Rhizopus oryzae lipase, Journal of Molecular Catalysis B: Enzymatic, 122 (2015) 147-155.

Babaki M, Yousefi M, Habibi Z, Mohammadi M, Brask J, Effect of water, organic solvent and adsorbent contents on production of biodiesel fuel from canola oil catalyzed by various lipases immobilized on epoxy-functionalized silica as low cost biocatalyst, Journal of Molecular Catalysis B: Enzymatic, 120 (2015) 93-99.

Yousefi M, Habibi Z, Mohammadi M, Nazari S, Momeni M, Lipase-catalysed addition of pyrrolidine to chalcone and benzylidene malonate derivatives, Chemistry of natural compounds, 51 (2015) 861-864.

Babaki M. Yousefi M, Habibi Z, Brask J, Mohammadi M, Preparation of highly reusable biocatalysts by immobilization of lipases on epoxy-functionalized silica for production of biodiesel from canola oil, Biochemical Engineering Journal 101 (2015) 23–31

Mohammadi M, Ashjari M, Dezvarei Sh, Yousefi M, Babaki M, Mohammadi J, Rapid and high-density covalent immobilization of Rhizomucor miehei lipase using a multi component reaction: application in biodiesel production, RSC Advances 5 (2015) 32698-32705.

Ashjari M, Mohammadi M, Badri R,Chemical amination of Rhizopus oryzae lipase for multipoint covalentimmobilization on epoxy-functionalized supports: Modulation ofstability and selectivity, Journal of Molecular Catalysis B: Enzymatic 115 (2015) 128–134.

Mohammadi M, Habibi Z, Dezvarei Sh, Yousefi M, Selective enrichment of polyunsaturated fatty acids by hydrolysis of fish oil using immobilized and stabilized Rhizomucor miehei lipase preparations, Food and bioproduct processing, 9 4 ( 2 0 1 5 ) 414–421.

Mohammadi M, Habibi Z, Dezvarei Sh, Yousefi M, Ashjari M, Samadi S. Improvement of the stability and selectivity of Rhizomucor miehei lipase immobilized on silica nanoparticles: Selective hydrolysis of fish oil using immobilized preparations, Process Biochemistry 49 (2014) 1314-1323

Yousefi M, Mohammadi M, Habibi Z, Enantioselective resolution of racemic ibuprofen esters using different lipases immobilized on octyl sepharose, Journal of Molecular Catalysis B: Enzymatic 104 (2014) 87–94.

Habibi Z, Mohammadi M, Yousefi M. Enzymatic hydrolysis of racemic ibuprofen esters using Rhizomucor miehei lipase immobilized on different supports, Process Biochemistry 48 (2013) 669.

Habibi Z, Yousefi M, Ghanian S, Mohammadi M, Ghasemi S, Biotransformation of progesterone by Absidia griseolla var. igachii and Rhizomucor pusillus, Steroids 77 (2012) 1446.

Mohammadi M, Yousefi M, Habibi Z, Dastan D, Chemical composition and antioxidant activity of the essential oil of Petasites Albus  from Iran: A good natural source of Euparin, Natural Product Research, 26 (2012) 291.

Mohammadi M, Ghavidel M, Habibi Z, Ashabi MA, Chemical composition of the essential oil of Haussknechtia elymaitica Bioss. from Iran: A good natural source for trans-asaron, Natural Product Research, 26 (2012) 1229.  

Yousefi M, Mohammadi M, Habibi Z, Cheraghi Z, Nitrile biotransformation by whole cells of Aspergillus sp. PTCC 5266, Biocatalysis and Biotransformation, 29 (2011) 54.

Yousefi M, Mohammadi M, Habibi Z, Disulphides in the volatile oil of Ferula behboudiana  Rech. f. & Esfand, Natural Product Research, 25 (2011) 1629.

Yousefi M, Mohammadi M, Habibi Z, Shafiee A, Biotransformation of Progesterone by Acremonium chrysogenum and Absidia griseolla var. igachii, Biocatalysis and Biotransformation, 28 (2010) 259.

Mohammadi M, Yousefi M, Habibi Z, Highly enantioselective bioreduction of prochiral ketones by stem and germinated plant of Brassica oleracea variety italic, Biocatalysis and Biotransformation, 29 (2011) 328.

Najafabadi RE, Mohammadi M, Yousefi M, Habibi Z, Chemical Composition and Antibacterial Activity of Essential Oils from Flowers, Seeds and Stems of Heracleum rechingeri (Manden) from Iran, Journal of Essential Oil-Bearing Plants, 14 (2011) 746.

Habibi Z, Hassan ZM, Noori Sh, Mozafari V, Yoosefi M, Mohammadi M, Hassani L, Interaction  of salvigenin with DNA, Daneshvar medicine journal (in Persian),  12 (2011) 1-9.

Yousefi M, Mohammadi M, Habibi Z, Shafiee A, Two new coumarins from the chloroform extract of Angelica urumiensis from Iran, Chem. Pharm. Bull. 54 (2010) 546.

Yousefi M, Mohammadi M, Habibi Z, Shafiee A, New polysulfanes from aerial parts of Ferula behboudiana Rech. f. & Esfand, Natural Product Research, 24 (2010) 1352.

Noori S, Hassan ZM, Mohammadi M, Habibi Z, Sohrabi N, Bayanolhagh S, Sclareol modulates the Treg intra-tumoral infiltrated cell and inhibits tumor growth in vivo, Cellular Immunology 263 (2010) 148.

Mohammadi M, Yousefi M, Habibi Z, Rahmati S, Imanzadeh G, Volatile constituents of Salvia ceratophylla L. and Salvia indica L. from Iran, Journal of Essential Oil-Bearing Plants, 13 (2010) 774.

Habibi Z, Eshaghi R, Mohammadi M, Yousefi M, Chemical composition and antibacterial activity of essential oil of Heracleum rechingeri (manden) from Iran, Natural Product Research, 24 (2010) 1013.

Hosseini SH, Mohammadi M, Spectroscopic, thermal and crystal structure properties of 4-nitro-4'-[N-ethyl-N-(2-hydroxyethyl)-amino]azobenzene acrylate dye, world applied science journal, 10 (2010) 138.

Mohammadi M, Yousefi M, Habibi Z, Essential oils from stem and leaves of Angelica urumiensis (Mozaffarian) from Iran. Natural Product Research, 24 (2010) 1347.

Habibi Z, Yousefi M, Mohammadi M, Eftekhar F, Biniyaz T, Rustaiyan A, The chemical composition and antibacterial activity of the volatile oils from Artemisia turcomanica Gand, Chemistry of Natural Compounds, 46 (2010) 819.

Hosseini SH, Mohammadi M, Preparation and characterization of new poly-pyrrole having side chain liquid crystalline moieties, Materials Science and Engineering C Materials for Biological Applications, 29 (2009) 1503.

PATENTS

A resin for simple purification of His-tagged proteins (Iranian Patent Organization, Patent Number: IR.81226).

A resin for purification of GST-tagged proteins (Iranian Patent Organization, Patent Number: IR.92813).

A method for the effective purification of Betanin from red beetroots (Iranian Patent Organization, Patent Number: IR.98562)