National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A C D E F G H I K L M N P Q R S T V W Y
*     2                                        
-     366                                        
?                                              
A     15                                        
C     21                                        
D     22                                        
E     18                                        
F     24                                        
G     15                                        
H     12                                        
I     30                                        
K     15                                        
L     30                                        
M     3                                        
N     6                                        
P     21                                        
Q     18                                        
R     12                                        
S     27                                        
T     15                                        
V     36                                        
W     3                                        
Y     21                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Uzbekistan 27894 A <*> 2 2
1 Uzbekistan 27895 T <*> 2 2
2 Uzbekistan 27896 G <*> 2 2
3 Uzbekistan 27897 A <*> 2 2
4 Uzbekistan 27898 A <*> 2 2
5 Uzbekistan 27899 A <*> 2 2
6 Uzbekistan 27900 T <*> 2 2
7 Uzbekistan 27901 T <*> 2 2
8 Uzbekistan 27902 T <*> 2 2
9 Uzbekistan 27903 C <*> 2 2
10 Uzbekistan 27904 T <*> 2 2
11 Uzbekistan 27905 T <*> 2 2
12 Uzbekistan 27906 G <*> 2 2
13 Uzbekistan 27907 T <*> 2 2
14 Uzbekistan 27908 T <*> 2 2
15 Uzbekistan 27909 T <*> 2 2
16 Uzbekistan 27910 T <*> 2 2
17 Uzbekistan 27911 C <*> 2 2
18 Uzbekistan 27912 T <*> 2 2
19 Uzbekistan 27913 T <*> 2 2
20 Uzbekistan 27914 A <*> 2 2
21 Uzbekistan 27915 G <*> 2 2
22 Uzbekistan 27916 G <*> 2 2
23 Uzbekistan 27917 A <*> 2 2
24 Uzbekistan 27918 A <*> 2 2
25 Uzbekistan 27919 T <*> 2 2
26 Uzbekistan 27920 C <*> 2 2
27 Uzbekistan 27921 A <*> 2 2
28 Uzbekistan 27922 T <*> 2 2
29 Uzbekistan 27923 C <*> 2 2
30 Uzbekistan 27924 A <*> 2 2
31 Uzbekistan 27925 C <*> 2 2
32 Uzbekistan 27926 A <*> 2 2
33 Uzbekistan 27927 A <*> 2 2
34 Uzbekistan 27928 C <*> 2 2
35 Uzbekistan 27929 T <*> 2 2
36 Uzbekistan 27930 G <*> 2 2
37 Uzbekistan 27931 T <*> 2 2
38 Uzbekistan 27932 A <*> 2 2
39 Uzbekistan 27933 G <*> 2 2
40 Uzbekistan 27934 C <*> 2 2
41 Uzbekistan 27935 T <*> 2 2
42 Uzbekistan 27936 G <*> 2 2
43 Uzbekistan 27937 C <*> 2 2
44 Uzbekistan 27938 A <*> 2 2
45 Uzbekistan 27939 T <*> 2 2
46 Uzbekistan 27940 T <*> 2 2
47 Uzbekistan 27941 T <*> 2 2
48 Uzbekistan 27942 C <*> 2 2
49 Uzbekistan 27943 A <*> 2 2
50 Uzbekistan 27944 C <*> 2 2
51 Uzbekistan 27945 C <*> 2 2
52 Uzbekistan 27946 A <*> 2 2
53 Uzbekistan 27947 A <*> 2 2
54 Uzbekistan 27948 G <*> 2 2
55 Uzbekistan 27949 A <*> 2 2
56 Uzbekistan 27950 A <*> 2 2
57 Uzbekistan 27951 T <*> 2 2
58 Uzbekistan 27952 G <*> 2 2
59 Uzbekistan 27953 T <*> 2 2
60 Uzbekistan 27954 A <*> 2 2
61 Uzbekistan 27955 G <*> 2 2
62 Uzbekistan 27956 T <*> 2 2
63 Uzbekistan 27957 T <*> 2 2
64 Uzbekistan 27958 T <*> 2 2
65 Uzbekistan 27959 A <*> 2 2
66 Uzbekistan 27960 C <*> 2 2
67 Uzbekistan 27961 A <*> 2 2
68 Uzbekistan 27962 G <*> 2 2
69 Uzbekistan 27963 T <*> 2 2
70 Uzbekistan 27964 C <*> 2 2
71 Uzbekistan 27965 A <*> 2 2
72 Uzbekistan 27966 T <*> 2 2
73 Uzbekistan 27967 G <*> 2 2
74 Uzbekistan 27968 T <*> 2 2
75 Uzbekistan 27969 A <*> 2 2
76 Uzbekistan 27970 C <*> 2 2
77 Uzbekistan 27971 T <*> 2 2
78 Uzbekistan 27972 C <*> 2 2
79 Uzbekistan 27973 A <*> 2 2
80 Uzbekistan 27974 A <*> 2 2
81 Uzbekistan 27975 C <*> 2 2
82 Uzbekistan 27976 A <*> 2 2
83 Uzbekistan 27977 T <*> 2 2
84 Uzbekistan 27978 C <*> 2 2
85 Uzbekistan 27979 A <*> 2 2
86 Uzbekistan 27980 A <*> 2 2
87 Uzbekistan 27981 C <*> 2 2
88 Uzbekistan 27982 C <*> 2 2
89 Uzbekistan 27983 A <*> 2 2
90 Uzbekistan 27984 T <*> 2 2
91 Uzbekistan 27985 A <*> 2 2
92 Uzbekistan 27986 T <*> 2 2
93 Uzbekistan 27987 G <*> 2 2
94 Uzbekistan 27988 T <*> 2 2
95 Uzbekistan 27989 A <*> 2 2
96 Uzbekistan 27990 G <*> 2 2
97 Uzbekistan 27991 T <*> 2 2
98 Uzbekistan 27992 T <*> 2 2
99 Uzbekistan 27993 G <*> 2 2
100 Uzbekistan 27994 A <*> 2 2
101 Uzbekistan 27995 T <*> 2 2
102 Uzbekistan 27996 G <*> 2 2
103 Uzbekistan 27997 A <*> 2 2
104 Uzbekistan 27998 C <*> 2 2
105 Uzbekistan 27999 C <*> 2 2
106 Uzbekistan 28000 C <*> 2 2
107 Uzbekistan 28001 G <*> 2 2
108 Uzbekistan 28002 T <*> 2 2
109 Uzbekistan 28003 G <*> 2 2
110 Uzbekistan 28004 T <*> 2 2
111 Uzbekistan 28005 C <*> 2 2
112 Uzbekistan 28006 C <*> 2 2
113 Uzbekistan 28007 T <*> 2 2
114 Uzbekistan 28008 A <*> 2 2
115 Uzbekistan 28009 T <*> 2 2
116 Uzbekistan 28010 T <*> 2 2
117 Uzbekistan 28011 C <*> 2 2
118 Uzbekistan 28012 A <*> 2 2
119 Uzbekistan 28013 C <*> 2 2
120 Uzbekistan 28014 T <*> 2 2
121 Uzbekistan 28015 T <*> 2 2
122 Uzbekistan 28016 C <*> 2 2
123 Uzbekistan 28017 T <*> 2 2
124 Uzbekistan 28018 A <*> 2 2
125 Uzbekistan 28019 T <*> 2 2
126 Uzbekistan 28020 T <*> 2 2
127 Uzbekistan 28021 C <*> 2 2
128 Uzbekistan 28022 T <*> 2 2
129 Uzbekistan 28023 A <*> 2 2
130 Uzbekistan 28024 A <*> 2 2
131 Uzbekistan 28025 A <*> 2 2
132 Uzbekistan 28026 T <*> 2 2
133 Uzbekistan 28027 G <*> 2 2
134 Uzbekistan 28028 G <*> 2 2
135 Uzbekistan 28029 T <*> 2 2
136 Uzbekistan 28030 A <*> 2 2
137 Uzbekistan 28031 T <*> 2 2
138 Uzbekistan 28032 A <*> 2 2
139 Uzbekistan 28033 T <*> 2 2
140 Uzbekistan 28034 T <*> 2 2
141 Uzbekistan 28035 A <*> 2 2
142 Uzbekistan 28036 G <*> 2 2
143 Uzbekistan 28037 A <*> 2 2
144 Uzbekistan 28038 G <*> 2 2
145 Uzbekistan 28039 T <*> 2 2
146 Uzbekistan 28040 A <*> 2 2
147 Uzbekistan 28041 G <*> 2 2
148 Uzbekistan 28042 G <*> 2 2
149 Uzbekistan 28043 A <*> 2 2
150 Uzbekistan 28044 G <*> 2 2
151 Uzbekistan 28045 C <*> 2 2
152 Uzbekistan 28046 T <*> 2 2
153 Uzbekistan 28047 A <*> 2 2
154 Uzbekistan 28048 G <*> 2 2
155 Uzbekistan 28049 A <*> 2 2
156 Uzbekistan 28050 A <*> 2 2
157 Uzbekistan 28051 A <*> 2 2
158 Uzbekistan 28052 A <*> 2 2
159 Uzbekistan 28053 T <*> 2 2
160 Uzbekistan 28054 C <*> 2 2
161 Uzbekistan 28055 A <*> 2 2
162 Uzbekistan 28056 G <*> 2 2
163 Uzbekistan 28057 C <*> 2 2
164 Uzbekistan 28058 A <*> 2 2
165 Uzbekistan 28059 C <*> 2 2
166 Uzbekistan 28060 C <*> 2 2
167 Uzbekistan 28061 T <*> 2 2
168 Uzbekistan 28062 T <*> 2 2
169 Uzbekistan 28063 T <*> 2 2
170 Uzbekistan 28064 A <*> 2 2
171 Uzbekistan 28065 A <*> 2 2
172 Uzbekistan 28066 T <*> 2 2
173 Uzbekistan 28067 T <*> 2 2
174 Uzbekistan 28068 G <*> 2 2
175 Uzbekistan 28069 A <*> 2 2
176 Uzbekistan 28070 A <*> 2 2
177 Uzbekistan 28071 T <*> 2 2
178 Uzbekistan 28072 T <*> 2 2
179 Uzbekistan 28073 G <*> 2 2
180 Uzbekistan 28074 T <*> 2 2
181 Uzbekistan 28075 G <*> 2 2
182 Uzbekistan 28076 C <*> 2 2
183 Uzbekistan 28077 G <*> 2 2
184 Uzbekistan 28078 T <*> 2 2
185 Uzbekistan 28079 G <*> 2 2
186 Uzbekistan 28080 G <*> 2 2
187 Uzbekistan 28081 A <*> 2 2
188 Uzbekistan 28082 T <*> 2 2
189 Uzbekistan 28083 G <*> 2 2
190 Uzbekistan 28084 A <*> 2 2
191 Uzbekistan 28085 G <*> 2 2
192 Uzbekistan 28086 G <*> 2 2
193 Uzbekistan 28087 C <*> 2 2
194 Uzbekistan 28088 T <*> 2 2
195 Uzbekistan 28089 G <*> 2 2
196 Uzbekistan 28090 G <*> 2 2
197 Uzbekistan 28091 T <*> 2 2
198 Uzbekistan 28092 T <*> 2 2
199 Uzbekistan 28093 C <*> 2 2
200 Uzbekistan 28094 T <*> 2 2
201 Uzbekistan 28095 A <*> 2 2
202 Uzbekistan 28096 A <*> 2 2
203 Uzbekistan 28097 A <*> 2 2
204 Uzbekistan 28098 T <*> 2 2
205 Uzbekistan 28099 C <*> 2 2
206 Uzbekistan 28100 A <*> 2 2
207 Uzbekistan 28101 C <*> 2 2
208 Uzbekistan 28102 C <*> 2 2
209 Uzbekistan 28103 C <*> 2 2
210 Uzbekistan 28104 A <*> 2 2
211 Uzbekistan 28105 T <*> 2 2
212 Uzbekistan 28106 T <*> 2 2
213 Uzbekistan 28107 C <*> 2 2
214 Uzbekistan 28108 A <*> 2 2
215 Uzbekistan 28109 G <*> 2 2
216 Uzbekistan 28110 T <*> 2 2
217 Uzbekistan 28111 A <*> 2 2
218 Uzbekistan 28112 C <*> 2 2
219 Uzbekistan 28113 A <*> 2 2
220 Uzbekistan 28114 T <*> 2 2
221 Uzbekistan 28115 C <*> 2 2
222 Uzbekistan 28116 G <*> 2 2
223 Uzbekistan 28117 A <*> 2 2
224 Uzbekistan 28118 T <*> 2 2
225 Uzbekistan 28119 A <*> 2 2
226 Uzbekistan 28120 T <*> 2 2
227 Uzbekistan 28121 C <*> 2 2
228 Uzbekistan 28122 G <*> 2 2
229 Uzbekistan 28123 G <*> 2 2
230 Uzbekistan 28124 T <*> 2 2
231 Uzbekistan 28125 A <*> 2 2
232 Uzbekistan 28126 A <*> 2 2
233 Uzbekistan 28127 T <*> 2 2
234 Uzbekistan 28128 T <*> 2 2
235 Uzbekistan 28129 A <*> 2 2
236 Uzbekistan 28130 T <*> 2 2
237 Uzbekistan 28131 A <*> 2 2
238 Uzbekistan 28132 C <*> 2 2
239 Uzbekistan 28133 A <*> 2 2
240 Uzbekistan 28134 G <*> 2 2
241 Uzbekistan 28135 T <*> 2 2
242 Uzbekistan 28136 T <*> 2 2
243 Uzbekistan 28137 T <*> 2 2
244 Uzbekistan 28138 C <*> 2 2
245 Uzbekistan 28139 C <*> 2 2
246 Uzbekistan 28140 T <*> 2 2
247 Uzbekistan 28141 G <*> 2 2
248 Uzbekistan 28142 T <*> 2 2
249 Uzbekistan 28143 T <*> 2 2
250 Uzbekistan 28144 T <*> 2 2
251 Uzbekistan 28145 A <*> 2 2
252 Uzbekistan 28146 C <*> 2 2
253 Uzbekistan 28147 C <*> 2 2
254 Uzbekistan 28148 T <*> 2 2
255 Uzbekistan 28149 T <*> 2 2
256 Uzbekistan 28150 T <*> 2 2
257 Uzbekistan 28151 T <*> 2 2
258 Uzbekistan 28152 A <*> 2 2
259 Uzbekistan 28153 C <*> 2 2
260 Uzbekistan 28154 A <*> 2 2
261 Uzbekistan 28155 A <*> 2 2
262 Uzbekistan 28156 T <*> 2 2
263 Uzbekistan 28157 T <*> 2 2
264 Uzbekistan 28158 A <*> 2 2
265 Uzbekistan 28159 A <*> 2 2
266 Uzbekistan 28160 T <*> 2 2
267 Uzbekistan 28161 T <*> 2 2
268 Uzbekistan 28162 G <*> 2 2
269 Uzbekistan 28163 C <*> 2 2
270 Uzbekistan 28164 C <*> 2 2
271 Uzbekistan 28165 A <*> 2 2
272 Uzbekistan 28166 G <*> 2 2
273 Uzbekistan 28167 G <*> 2 2
274 Uzbekistan 28168 A <*> 2 2
275 Uzbekistan 28169 A <*> 2 2
276 Uzbekistan 28170 C <*> 2 2
277 Uzbekistan 28171 C <*> 2 2
278 Uzbekistan 28172 T <*> 2 2
279 Uzbekistan 28173 A <*> 2 2
280 Uzbekistan 28174 A <*> 2 2
281 Uzbekistan 28175 A <*> 2 2
282 Uzbekistan 28176 T <*> 2 2
283 Uzbekistan 28177 T <*> 2 2
284 Uzbekistan 28178 G <*> 2 2
285 Uzbekistan 28179 G <*> 2 2
286 Uzbekistan 28180 G <*> 2 2
287 Uzbekistan 28181 T <*> 2 2
288 Uzbekistan 28182 A <*> 2 2
289 Uzbekistan 28183 G <*> 2 2
290 Uzbekistan 28184 T <*> 2 2
291 Uzbekistan 28185 C <*> 2 2
292 Uzbekistan 28186 T <*> 2 2
293 Uzbekistan 28187 T <*> 2 2
294 Uzbekistan 28188 G <*> 2 2
295 Uzbekistan 28189 T <*> 2 2
296 Uzbekistan 28190 A <*> 2 2
297 Uzbekistan 28191 G <*> 2 2
298 Uzbekistan 28192 T <*> 2 2
299 Uzbekistan 28193 G <*> 2 2
300 Uzbekistan 28194 C <*> 2 2
301 Uzbekistan 28195 G <*> 2 2
302 Uzbekistan 28196 T <*> 2 2
303 Uzbekistan 28197 T <*> 2 2
304 Uzbekistan 28198 G <*> 2 2
305 Uzbekistan 28199 T <*> 2 2
306 Uzbekistan 28200 T <*> 2 2
307 Uzbekistan 28201 C <*> 2 2
308 Uzbekistan 28202 G <*> 2 2
309 Uzbekistan 28203 T <*> 2 2
310 Uzbekistan 28204 T <*> 2 2
311 Uzbekistan 28205 C <*> 2 2
312 Uzbekistan 28206 T <*> 2 2
313 Uzbekistan 28207 A <*> 2 2
314 Uzbekistan 28208 T <*> 2 2
315 Uzbekistan 28209 G <*> 2 2
316 Uzbekistan 28210 A <*> 2 2
317 Uzbekistan 28211 A <*> 2 2
318 Uzbekistan 28212 G <*> 2 2
319 Uzbekistan 28213 A <*> 2 2
320 Uzbekistan 28214 C <*> 2 2
321 Uzbekistan 28215 T <*> 2 2
322 Uzbekistan 28216 T <*> 2 2
323 Uzbekistan 28217 T <*> 2 2
324 Uzbekistan 28218 T <*> 2 2
325 Uzbekistan 28219 T <*> 2 2
326 Uzbekistan 28220 A <*> 2 2
327 Uzbekistan 28221 G <*> 2 2
328 Uzbekistan 28222 A <*> 2 2
329 Uzbekistan 28223 G <*> 2 2
330 Uzbekistan 28224 T <*> 2 2
331 Uzbekistan 28225 A <*> 2 2
332 Uzbekistan 28226 T <*> 2 2
333 Uzbekistan 28227 C <*> 2 2
334 Uzbekistan 28228 A <*> 2 2
335 Uzbekistan 28229 T <*> 2 2
336 Uzbekistan 28230 G <*> 2 2
337 Uzbekistan 28231 A <*> 2 2
338 Uzbekistan 28232 C <*> 2 2
339 Uzbekistan 28233 G <*> 2 2
340 Uzbekistan 28234 T <*> 2 2
341 Uzbekistan 28235 T <*> 2 2
342 Uzbekistan 28236 C <*> 2 2
343 Uzbekistan 28237 G <*> 2 2
344 Uzbekistan 28238 T <*> 2 2
345 Uzbekistan 28239 G <*> 2 2
346 Uzbekistan 28240 T <*> 2 2
347 Uzbekistan 28241 T <*> 2 2
348 Uzbekistan 28242 G <*> 2 2
349 Uzbekistan 28243 T <*> 2 2
350 Uzbekistan 28244 T <*> 2 2
351 Uzbekistan 28245 T <*> 2 2
352 Uzbekistan 28246 T <*> 2 2
353 Uzbekistan 28247 A <*> 2 2
354 Uzbekistan 28248 G <*> 2 2
355 Uzbekistan 28249 A <*> 2 2
356 Uzbekistan 28250 T <*> 2 2
357 Uzbekistan 28251 T <*> 2 2
358 Uzbekistan 28252 T <*> 2 2
359 Uzbekistan 28253 C <*> 2 2
360 Uzbekistan 28254 A <*> 2 2
361 Uzbekistan 28255 T <*> 2 2
362 Uzbekistan 28256 C <*> 2 2
363 Uzbekistan 28257 T <*> 2 2
364 Uzbekistan 28258 A <*> 2 2
365 Uzbekistan 28259 A <*> 2 2