National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A C D E F G H I K L M N P Q R S T V W Y
*     2                                        
-     366                                        
?                                              
A     15                                        
C     21                                        
D     22                                        
E     18     1                                  
F     24                                        
G     15                                        
H     12                                        
I     30                                        
K     15                                        
L     30                                        
M     3                                        
N     6                                        
P     21                                        
Q     18                                        
R     12                                        
S     27                                        
T     15                                        
V     36                                        
W     3                                        
Y     21                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Republic_of_Congo 27894 A 11 11
1 Republic_of_Congo 27895 T 11 11
2 Republic_of_Congo 27896 G 11 11
3 Republic_of_Congo 27897 A 11 11
4 Republic_of_Congo 27898 A 11 11
5 Republic_of_Congo 27899 A 11 11
6 Republic_of_Congo 27900 T 11 11
7 Republic_of_Congo 27901 T 11 11
8 Republic_of_Congo 27902 T 11 11
9 Republic_of_Congo 27903 C 11 11
10 Republic_of_Congo 27904 T 11 11
11 Republic_of_Congo 27905 T 11 11
12 Republic_of_Congo 27906 G 11 11
13 Republic_of_Congo 27907 T 11 11
14 Republic_of_Congo 27908 T 11 11
15 Republic_of_Congo 27909 T 11 11
16 Republic_of_Congo 27910 T 11 11
17 Republic_of_Congo 27911 C 11 11
18 Republic_of_Congo 27912 T 11 11
19 Republic_of_Congo 27913 T 11 11
20 Republic_of_Congo 27914 A 11 11
21 Republic_of_Congo 27915 G 11 11
22 Republic_of_Congo 27916 G 11 11
23 Republic_of_Congo 27917 A 11 11
24 Republic_of_Congo 27918 A 11 11
25 Republic_of_Congo 27919 T 11 11
26 Republic_of_Congo 27920 C 11 11
27 Republic_of_Congo 27921 A 11 11
28 Republic_of_Congo 27922 T 11 11
29 Republic_of_Congo 27923 C 11 11
30 Republic_of_Congo 27924 A 11 11
31 Republic_of_Congo 27925 C 11 11
32 Republic_of_Congo 27926 A 11 11
33 Republic_of_Congo 27927 A 11 11
34 Republic_of_Congo 27928 C 11 11
35 Republic_of_Congo 27929 T 11 11
36 Republic_of_Congo 27930 G 11 11
37 Republic_of_Congo 27931 T 11 11
38 Republic_of_Congo 27932 A 11 11
39 Republic_of_Congo 27933 G 11 11
40 Republic_of_Congo 27934 C 11 11
41 Republic_of_Congo 27935 T 11 11
42 Republic_of_Congo 27936 G 11 11
43 Republic_of_Congo 27937 C 11 11
44 Republic_of_Congo 27938 A 11 11
45 Republic_of_Congo 27939 T 11 11
46 Republic_of_Congo 27940 T 11 11
47 Republic_of_Congo 27941 T 11 11
48 Republic_of_Congo 27942 C 11 11
49 Republic_of_Congo 27943 A 11 11
50 Republic_of_Congo 27944 C 11 11
51 Republic_of_Congo 27945 C 11 11
52 Republic_of_Congo 27946 A 11 11
53 Republic_of_Congo 27947 A 11 11
54 Republic_of_Congo 27948 G 11 11
55 Republic_of_Congo 27949 A 11 11
56 Republic_of_Congo 27950 A C 11 10 Glu19Asp
57 Republic_of_Congo 27951 T 11 11
58 Republic_of_Congo 27952 G 11 11
59 Republic_of_Congo 27953 T 11 11
60 Republic_of_Congo 27954 A 11 11
61 Republic_of_Congo 27955 G 11 11
62 Republic_of_Congo 27956 T 11 11
63 Republic_of_Congo 27957 T 11 11
64 Republic_of_Congo 27958 T 11 11
65 Republic_of_Congo 27959 A 11 11
66 Republic_of_Congo 27960 C 11 11
67 Republic_of_Congo 27961 A 11 11
68 Republic_of_Congo 27962 G 11 11
69 Republic_of_Congo 27963 T 11 11
70 Republic_of_Congo 27964 C 11 11
71 Republic_of_Congo 27965 A 11 11
72 Republic_of_Congo 27966 T 11 11
73 Republic_of_Congo 27967 G 11 11
74 Republic_of_Congo 27968 T 11 11
75 Republic_of_Congo 27969 A 11 11
76 Republic_of_Congo 27970 C 11 11
77 Republic_of_Congo 27971 T 11 11
78 Republic_of_Congo 27972 C 11 11
79 Republic_of_Congo 27973 A 11 11
80 Republic_of_Congo 27974 A 11 11
81 Republic_of_Congo 27975 C 11 11
82 Republic_of_Congo 27976 A 11 11
83 Republic_of_Congo 27977 T 11 11
84 Republic_of_Congo 27978 C 11 11
85 Republic_of_Congo 27979 A 11 11
86 Republic_of_Congo 27980 A 11 11
87 Republic_of_Congo 27981 C 11 11
88 Republic_of_Congo 27982 C 11 11
89 Republic_of_Congo 27983 A 11 11
90 Republic_of_Congo 27984 T 11 11
91 Republic_of_Congo 27985 A 11 11
92 Republic_of_Congo 27986 T 11 11
93 Republic_of_Congo 27987 G 11 11
94 Republic_of_Congo 27988 T 11 11
95 Republic_of_Congo 27989 A 11 11
96 Republic_of_Congo 27990 G 11 11
97 Republic_of_Congo 27991 T 11 11
98 Republic_of_Congo 27992 T 11 11
99 Republic_of_Congo 27993 G 11 11
100 Republic_of_Congo 27994 A 11 11
101 Republic_of_Congo 27995 T 11 11
102 Republic_of_Congo 27996 G 11 11
103 Republic_of_Congo 27997 A 11 11
104 Republic_of_Congo 27998 C 11 11
105 Republic_of_Congo 27999 C 11 11
106 Republic_of_Congo 28000 C 11 11
107 Republic_of_Congo 28001 G 11 11
108 Republic_of_Congo 28002 T 11 11
109 Republic_of_Congo 28003 G 11 11
110 Republic_of_Congo 28004 T 11 11
111 Republic_of_Congo 28005 C 11 11
112 Republic_of_Congo 28006 C 11 11
113 Republic_of_Congo 28007 T 11 11
114 Republic_of_Congo 28008 A 11 11
115 Republic_of_Congo 28009 T 11 11
116 Republic_of_Congo 28010 T 11 11
117 Republic_of_Congo 28011 C 11 11
118 Republic_of_Congo 28012 A 11 11
119 Republic_of_Congo 28013 C 11 11
120 Republic_of_Congo 28014 T 11 11
121 Republic_of_Congo 28015 T 11 11
122 Republic_of_Congo 28016 C 11 11
123 Republic_of_Congo 28017 T 11 11
124 Republic_of_Congo 28018 A 11 11
125 Republic_of_Congo 28019 T 11 11
126 Republic_of_Congo 28020 T 11 11
127 Republic_of_Congo 28021 C 11 11
128 Republic_of_Congo 28022 T 11 11
129 Republic_of_Congo 28023 A 11 11
130 Republic_of_Congo 28024 A 11 11
131 Republic_of_Congo 28025 A 11 11
132 Republic_of_Congo 28026 T 11 11
133 Republic_of_Congo 28027 G 11 11
134 Republic_of_Congo 28028 G 11 11
135 Republic_of_Congo 28029 T 11 11
136 Republic_of_Congo 28030 A 11 11
137 Republic_of_Congo 28031 T 11 11
138 Republic_of_Congo 28032 A 11 11
139 Republic_of_Congo 28033 T 11 11
140 Republic_of_Congo 28034 T 11 11
141 Republic_of_Congo 28035 A 11 11
142 Republic_of_Congo 28036 G 11 11
143 Republic_of_Congo 28037 A 11 11
144 Republic_of_Congo 28038 G 11 11
145 Republic_of_Congo 28039 T 11 11
146 Republic_of_Congo 28040 A 11 11
147 Republic_of_Congo 28041 G 11 11
148 Republic_of_Congo 28042 G 11 11
149 Republic_of_Congo 28043 A 11 11
150 Republic_of_Congo 28044 G 11 11
151 Republic_of_Congo 28045 C 11 11
152 Republic_of_Congo 28046 T 11 11
153 Republic_of_Congo 28047 A 11 11
154 Republic_of_Congo 28048 G 11 11
155 Republic_of_Congo 28049 A 11 11
156 Republic_of_Congo 28050 A 11 11
157 Republic_of_Congo 28051 A 11 11
158 Republic_of_Congo 28052 A 11 11
159 Republic_of_Congo 28053 T 11 11
160 Republic_of_Congo 28054 C 11 11
161 Republic_of_Congo 28055 A 11 11
162 Republic_of_Congo 28056 G 11 11
163 Republic_of_Congo 28057 C 11 11
164 Republic_of_Congo 28058 A 11 11
165 Republic_of_Congo 28059 C 11 11
166 Republic_of_Congo 28060 C 11 11
167 Republic_of_Congo 28061 T 11 11
168 Republic_of_Congo 28062 T 11 11
169 Republic_of_Congo 28063 T 11 11
170 Republic_of_Congo 28064 A 11 11
171 Republic_of_Congo 28065 A 11 11
172 Republic_of_Congo 28066 T 11 11
173 Republic_of_Congo 28067 T 11 11
174 Republic_of_Congo 28068 G 11 11
175 Republic_of_Congo 28069 A 11 11
176 Republic_of_Congo 28070 A 11 11
177 Republic_of_Congo 28071 T 11 11
178 Republic_of_Congo 28072 T 11 11
179 Republic_of_Congo 28073 G 11 11
180 Republic_of_Congo 28074 T 11 11
181 Republic_of_Congo 28075 G 11 11
182 Republic_of_Congo 28076 C 11 11
183 Republic_of_Congo 28077 G 11 11
184 Republic_of_Congo 28078 T 11 11
185 Republic_of_Congo 28079 G 11 11
186 Republic_of_Congo 28080 G 11 11
187 Republic_of_Congo 28081 A 11 11
188 Republic_of_Congo 28082 T 11 11
189 Republic_of_Congo 28083 G 11 11
190 Republic_of_Congo 28084 A 11 11
191 Republic_of_Congo 28085 G 11 11
192 Republic_of_Congo 28086 G 11 11
193 Republic_of_Congo 28087 C 11 11
194 Republic_of_Congo 28088 T 11 11
195 Republic_of_Congo 28089 G 11 11
196 Republic_of_Congo 28090 G 11 11
197 Republic_of_Congo 28091 T 11 11
198 Republic_of_Congo 28092 T 11 11
199 Republic_of_Congo 28093 C 11 11
200 Republic_of_Congo 28094 T 11 11
201 Republic_of_Congo 28095 A 11 11
202 Republic_of_Congo 28096 A 11 11
203 Republic_of_Congo 28097 A 11 11
204 Republic_of_Congo 28098 T 11 11
205 Republic_of_Congo 28099 C 11 11
206 Republic_of_Congo 28100 A 11 11
207 Republic_of_Congo 28101 C 11 11
208 Republic_of_Congo 28102 C 11 11
209 Republic_of_Congo 28103 C 11 11
210 Republic_of_Congo 28104 A 11 11
211 Republic_of_Congo 28105 T 11 11
212 Republic_of_Congo 28106 T 11 11
213 Republic_of_Congo 28107 C 11 11
214 Republic_of_Congo 28108 A 11 11
215 Republic_of_Congo 28109 G 11 11
216 Republic_of_Congo 28110 T 11 11
217 Republic_of_Congo 28111 A 11 11
218 Republic_of_Congo 28112 C 11 11
219 Republic_of_Congo 28113 A 11 11
220 Republic_of_Congo 28114 T 11 11
221 Republic_of_Congo 28115 C 11 11
222 Republic_of_Congo 28116 G 11 11
223 Republic_of_Congo 28117 A 11 11
224 Republic_of_Congo 28118 T 11 11
225 Republic_of_Congo 28119 A 11 11
226 Republic_of_Congo 28120 T 11 11
227 Republic_of_Congo 28121 C 11 11
228 Republic_of_Congo 28122 G 11 11
229 Republic_of_Congo 28123 G 11 11
230 Republic_of_Congo 28124 T 11 11
231 Republic_of_Congo 28125 A 11 11
232 Republic_of_Congo 28126 A 11 11
233 Republic_of_Congo 28127 T 11 11
234 Republic_of_Congo 28128 T 11 11
235 Republic_of_Congo 28129 A 11 11
236 Republic_of_Congo 28130 T 11 11
237 Republic_of_Congo 28131 A 11 11
238 Republic_of_Congo 28132 C 11 11
239 Republic_of_Congo 28133 A 11 11
240 Republic_of_Congo 28134 G 11 11
241 Republic_of_Congo 28135 T 11 11
242 Republic_of_Congo 28136 T 11 11
243 Republic_of_Congo 28137 T 11 11
244 Republic_of_Congo 28138 C 11 11
245 Republic_of_Congo 28139 C 11 11
246 Republic_of_Congo 28140 T 11 11
247 Republic_of_Congo 28141 G 11 11
248 Republic_of_Congo 28142 T 11 11
249 Republic_of_Congo 28143 T 11 11
250 Republic_of_Congo 28144 T 11 11
251 Republic_of_Congo 28145 A 11 11
252 Republic_of_Congo 28146 C 11 11
253 Republic_of_Congo 28147 C 11 11
254 Republic_of_Congo 28148 T 11 11
255 Republic_of_Congo 28149 T 11 11
256 Republic_of_Congo 28150 T 11 11
257 Republic_of_Congo 28151 T 11 11
258 Republic_of_Congo 28152 A 11 11
259 Republic_of_Congo 28153 C 11 11
260 Republic_of_Congo 28154 A 11 11
261 Republic_of_Congo 28155 A 11 11
262 Republic_of_Congo 28156 T 11 11
263 Republic_of_Congo 28157 T 11 11
264 Republic_of_Congo 28158 A 11 11
265 Republic_of_Congo 28159 A 11 11
266 Republic_of_Congo 28160 T 11 11
267 Republic_of_Congo 28161 T 11 11
268 Republic_of_Congo 28162 G 11 11
269 Republic_of_Congo 28163 C 11 11
270 Republic_of_Congo 28164 C 11 11
271 Republic_of_Congo 28165 A 11 11
272 Republic_of_Congo 28166 G 11 11
273 Republic_of_Congo 28167 G 11 11
274 Republic_of_Congo 28168 A 11 11
275 Republic_of_Congo 28169 A 11 11
276 Republic_of_Congo 28170 C 11 11
277 Republic_of_Congo 28171 C 11 11
278 Republic_of_Congo 28172 T 11 11
279 Republic_of_Congo 28173 A 11 11
280 Republic_of_Congo 28174 A 11 11
281 Republic_of_Congo 28175 A 11 11
282 Republic_of_Congo 28176 T 11 11
283 Republic_of_Congo 28177 T 11 11
284 Republic_of_Congo 28178 G 11 11
285 Republic_of_Congo 28179 G 11 11
286 Republic_of_Congo 28180 G 11 11
287 Republic_of_Congo 28181 T 11 11
288 Republic_of_Congo 28182 A 11 11
289 Republic_of_Congo 28183 G 11 11
290 Republic_of_Congo 28184 T 11 11
291 Republic_of_Congo 28185 C 11 11
292 Republic_of_Congo 28186 T 11 11
293 Republic_of_Congo 28187 T 11 11
294 Republic_of_Congo 28188 G 11 11
295 Republic_of_Congo 28189 T 11 11
296 Republic_of_Congo 28190 A 11 11
297 Republic_of_Congo 28191 G 11 11
298 Republic_of_Congo 28192 T 11 11
299 Republic_of_Congo 28193 G 11 11
300 Republic_of_Congo 28194 C 11 11
301 Republic_of_Congo 28195 G 11 11
302 Republic_of_Congo 28196 T 11 11
303 Republic_of_Congo 28197 T 11 11
304 Republic_of_Congo 28198 G 11 11
305 Republic_of_Congo 28199 T 11 11
306 Republic_of_Congo 28200 T 11 11
307 Republic_of_Congo 28201 C 11 11
308 Republic_of_Congo 28202 G 11 11
309 Republic_of_Congo 28203 T 11 11
310 Republic_of_Congo 28204 T 11 11
311 Republic_of_Congo 28205 C 11 11
312 Republic_of_Congo 28206 T 11 11
313 Republic_of_Congo 28207 A 11 11
314 Republic_of_Congo 28208 T 11 11
315 Republic_of_Congo 28209 G 11 11
316 Republic_of_Congo 28210 A 11 11
317 Republic_of_Congo 28211 A 11 11
318 Republic_of_Congo 28212 G 11 11
319 Republic_of_Congo 28213 A 11 11
320 Republic_of_Congo 28214 C 11 11
321 Republic_of_Congo 28215 T 11 11
322 Republic_of_Congo 28216 T 11 11
323 Republic_of_Congo 28217 T 11 11
324 Republic_of_Congo 28218 T 11 11
325 Republic_of_Congo 28219 T 11 11
326 Republic_of_Congo 28220 A 11 11
327 Republic_of_Congo 28221 G 11 11
328 Republic_of_Congo 28222 A 11 11
329 Republic_of_Congo 28223 G 11 11
330 Republic_of_Congo 28224 T 11 11
331 Republic_of_Congo 28225 A 11 11
332 Republic_of_Congo 28226 T 11 11
333 Republic_of_Congo 28227 C 11 11
334 Republic_of_Congo 28228 A 11 11
335 Republic_of_Congo 28229 T 11 11
336 Republic_of_Congo 28230 G 11 11
337 Republic_of_Congo 28231 A 11 11
338 Republic_of_Congo 28232 C 11 11
339 Republic_of_Congo 28233 G 11 11
340 Republic_of_Congo 28234 T 11 11
341 Republic_of_Congo 28235 T 11 11
342 Republic_of_Congo 28236 C 11 11
343 Republic_of_Congo 28237 G 11 11
344 Republic_of_Congo 28238 T 11 11
345 Republic_of_Congo 28239 G 11 11
346 Republic_of_Congo 28240 T 11 11
347 Republic_of_Congo 28241 T 11 11
348 Republic_of_Congo 28242 G 11 11
349 Republic_of_Congo 28243 T 11 11
350 Republic_of_Congo 28244 T 11 11
351 Republic_of_Congo 28245 T 11 11
352 Republic_of_Congo 28246 T 11 11
353 Republic_of_Congo 28247 A 11 11
354 Republic_of_Congo 28248 G 11 11
355 Republic_of_Congo 28249 A 11 11
356 Republic_of_Congo 28250 T 11 11
357 Republic_of_Congo 28251 T 11 11
358 Republic_of_Congo 28252 T 11 11
359 Republic_of_Congo 28253 C 11 11
360 Republic_of_Congo 28254 A 11 11
361 Republic_of_Congo 28255 T 11 11
362 Republic_of_Congo 28256 C 11 11
363 Republic_of_Congo 28257 T 11 11
364 Republic_of_Congo 28258 A 11 11
365 Republic_of_Congo 28259 A 11 11