National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A C D E F G H I K L M N P Q R S T V W Y
*     2                                        
-     366                                        
?                                              
A     15                                        
C     21                                        
D     22                                        
E     18                                        
F     24                                        
G     15                                        
H     12                                        
I     30                                        
K     15                                        
L     30                                        
M     3                                        
N     6                                        
P     21                                        
Q     18                                        
R     12                                        
S     27                                        
T     15                                        
V     36                                        
W     3                                        
Y     21                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Bulgaria 27894 A 15 15
1 Bulgaria 27895 T 15 15
2 Bulgaria 27896 G 15 15
3 Bulgaria 27897 A 15 15
4 Bulgaria 27898 A 15 15
5 Bulgaria 27899 A 15 15
6 Bulgaria 27900 T 15 15
7 Bulgaria 27901 T 15 15
8 Bulgaria 27902 T 15 15
9 Bulgaria 27903 C 15 15
10 Bulgaria 27904 T 15 15
11 Bulgaria 27905 T 15 15
12 Bulgaria 27906 G 15 15
13 Bulgaria 27907 T 15 15
14 Bulgaria 27908 T 15 15
15 Bulgaria 27909 T 15 15
16 Bulgaria 27910 T 15 15
17 Bulgaria 27911 C 15 15
18 Bulgaria 27912 T 15 15
19 Bulgaria 27913 T 15 15
20 Bulgaria 27914 A 15 15
21 Bulgaria 27915 G 15 15
22 Bulgaria 27916 G 15 15
23 Bulgaria 27917 A 15 15
24 Bulgaria 27918 A 15 15
25 Bulgaria 27919 T 15 15
26 Bulgaria 27920 C 15 15
27 Bulgaria 27921 A 15 15
28 Bulgaria 27922 T 15 15
29 Bulgaria 27923 C 15 15
30 Bulgaria 27924 A 15 15
31 Bulgaria 27925 C 15 15
32 Bulgaria 27926 A 15 15
33 Bulgaria 27927 A 15 15
34 Bulgaria 27928 C 15 15
35 Bulgaria 27929 T 15 15
36 Bulgaria 27930 G 15 15
37 Bulgaria 27931 T 15 15
38 Bulgaria 27932 A 15 15
39 Bulgaria 27933 G 15 15
40 Bulgaria 27934 C 15 15
41 Bulgaria 27935 T 15 15
42 Bulgaria 27936 G 15 15
43 Bulgaria 27937 C 15 15
44 Bulgaria 27938 A 15 15
45 Bulgaria 27939 T 15 15
46 Bulgaria 27940 T 15 15
47 Bulgaria 27941 T 15 15
48 Bulgaria 27942 C 15 15
49 Bulgaria 27943 A 15 15
50 Bulgaria 27944 C 15 15
51 Bulgaria 27945 C 15 15
52 Bulgaria 27946 A 15 15
53 Bulgaria 27947 A 15 15
54 Bulgaria 27948 G 15 15
55 Bulgaria 27949 A 15 15
56 Bulgaria 27950 A 15 15
57 Bulgaria 27951 T 15 15
58 Bulgaria 27952 G 15 15
59 Bulgaria 27953 T 15 15
60 Bulgaria 27954 A 15 15
61 Bulgaria 27955 G 15 15
62 Bulgaria 27956 T 15 15
63 Bulgaria 27957 T 15 15
64 Bulgaria 27958 T 15 15
65 Bulgaria 27959 A 15 15
66 Bulgaria 27960 C 15 15
67 Bulgaria 27961 A 15 15
68 Bulgaria 27962 G 15 15
69 Bulgaria 27963 T 15 15
70 Bulgaria 27964 C 15 15
71 Bulgaria 27965 A 15 15
72 Bulgaria 27966 T 15 15
73 Bulgaria 27967 G 15 15
74 Bulgaria 27968 T 15 15
75 Bulgaria 27969 A 15 15
76 Bulgaria 27970 C 15 15
77 Bulgaria 27971 T 15 15
78 Bulgaria 27972 C 15 15
79 Bulgaria 27973 A 15 15
80 Bulgaria 27974 A 15 15
81 Bulgaria 27975 C 15 15
82 Bulgaria 27976 A 15 15
83 Bulgaria 27977 T 15 15
84 Bulgaria 27978 C 15 15
85 Bulgaria 27979 A 15 15
86 Bulgaria 27980 A 15 15
87 Bulgaria 27981 C 15 15
88 Bulgaria 27982 C 15 15
89 Bulgaria 27983 A 15 15
90 Bulgaria 27984 T 15 15
91 Bulgaria 27985 A 15 15
92 Bulgaria 27986 T 15 15
93 Bulgaria 27987 G 15 15
94 Bulgaria 27988 T 15 15
95 Bulgaria 27989 A 15 15
96 Bulgaria 27990 G 15 15
97 Bulgaria 27991 T 15 15
98 Bulgaria 27992 T 15 15
99 Bulgaria 27993 G 15 15
100 Bulgaria 27994 A 15 15
101 Bulgaria 27995 T 15 15
102 Bulgaria 27996 G 15 15
103 Bulgaria 27997 A 15 15
104 Bulgaria 27998 C 15 15
105 Bulgaria 27999 C 15 15
106 Bulgaria 28000 C 15 15
107 Bulgaria 28001 G 15 15
108 Bulgaria 28002 T 15 15
109 Bulgaria 28003 G 15 15
110 Bulgaria 28004 T 15 15
111 Bulgaria 28005 C 15 15
112 Bulgaria 28006 C 15 15
113 Bulgaria 28007 T 15 15
114 Bulgaria 28008 A 15 15
115 Bulgaria 28009 T 15 15
116 Bulgaria 28010 T 15 15
117 Bulgaria 28011 C 15 15
118 Bulgaria 28012 A 15 15
119 Bulgaria 28013 C 15 15
120 Bulgaria 28014 T 15 15
121 Bulgaria 28015 T 15 15
122 Bulgaria 28016 C 15 15
123 Bulgaria 28017 T 15 15
124 Bulgaria 28018 A 15 15
125 Bulgaria 28019 T 15 15
126 Bulgaria 28020 T 15 15
127 Bulgaria 28021 C 15 15
128 Bulgaria 28022 T 15 15
129 Bulgaria 28023 A 15 15
130 Bulgaria 28024 A 15 15
131 Bulgaria 28025 A 15 15
132 Bulgaria 28026 T 15 15
133 Bulgaria 28027 G 15 15
134 Bulgaria 28028 G 15 15
135 Bulgaria 28029 T 15 15
136 Bulgaria 28030 A 15 15
137 Bulgaria 28031 T 15 15
138 Bulgaria 28032 A 15 15
139 Bulgaria 28033 T 15 15
140 Bulgaria 28034 T 15 15
141 Bulgaria 28035 A 15 15
142 Bulgaria 28036 G 15 15
143 Bulgaria 28037 A 15 15
144 Bulgaria 28038 G 15 15
145 Bulgaria 28039 T 15 15
146 Bulgaria 28040 A 15 15
147 Bulgaria 28041 G 15 15
148 Bulgaria 28042 G 15 15
149 Bulgaria 28043 A 15 15
150 Bulgaria 28044 G 15 15
151 Bulgaria 28045 C 15 15
152 Bulgaria 28046 T 15 15
153 Bulgaria 28047 A 15 15
154 Bulgaria 28048 G 15 15
155 Bulgaria 28049 A 15 15
156 Bulgaria 28050 A 15 15
157 Bulgaria 28051 A 15 15
158 Bulgaria 28052 A 15 15
159 Bulgaria 28053 T 15 15
160 Bulgaria 28054 C 15 15
161 Bulgaria 28055 A 15 15
162 Bulgaria 28056 G 15 15
163 Bulgaria 28057 C 15 15
164 Bulgaria 28058 A 15 15
165 Bulgaria 28059 C 15 15
166 Bulgaria 28060 C 15 15
167 Bulgaria 28061 T 15 15
168 Bulgaria 28062 T 15 15
169 Bulgaria 28063 T 15 15
170 Bulgaria 28064 A 15 15
171 Bulgaria 28065 A 15 15
172 Bulgaria 28066 T 15 15
173 Bulgaria 28067 T 15 15
174 Bulgaria 28068 G 15 15
175 Bulgaria 28069 A 15 15
176 Bulgaria 28070 A 15 15
177 Bulgaria 28071 T 15 15
178 Bulgaria 28072 T 15 15
179 Bulgaria 28073 G 15 15
180 Bulgaria 28074 T 15 15
181 Bulgaria 28075 G 15 15
182 Bulgaria 28076 C 15 15
183 Bulgaria 28077 G 15 15
184 Bulgaria 28078 T 15 15
185 Bulgaria 28079 G 15 15
186 Bulgaria 28080 G 15 15
187 Bulgaria 28081 A 15 15
188 Bulgaria 28082 T 15 15
189 Bulgaria 28083 G 15 15
190 Bulgaria 28084 A 15 15
191 Bulgaria 28085 G 15 15
192 Bulgaria 28086 G 15 15
193 Bulgaria 28087 C 15 15
194 Bulgaria 28088 T 15 15
195 Bulgaria 28089 G 15 15
196 Bulgaria 28090 G 15 15
197 Bulgaria 28091 T 15 15
198 Bulgaria 28092 T 15 15
199 Bulgaria 28093 C 15 15
200 Bulgaria 28094 T 15 15
201 Bulgaria 28095 A 15 15
202 Bulgaria 28096 A 15 15
203 Bulgaria 28097 A 15 15
204 Bulgaria 28098 T 15 15
205 Bulgaria 28099 C 15 15
206 Bulgaria 28100 A 15 15
207 Bulgaria 28101 C 15 15
208 Bulgaria 28102 C 15 15
209 Bulgaria 28103 C 15 15
210 Bulgaria 28104 A 15 15
211 Bulgaria 28105 T 15 15
212 Bulgaria 28106 T 15 15
213 Bulgaria 28107 C 15 15
214 Bulgaria 28108 A 15 15
215 Bulgaria 28109 G 15 15
216 Bulgaria 28110 T 15 15
217 Bulgaria 28111 A 15 15
218 Bulgaria 28112 C 15 15
219 Bulgaria 28113 A 15 15
220 Bulgaria 28114 T 15 15
221 Bulgaria 28115 C 15 15
222 Bulgaria 28116 G 15 15
223 Bulgaria 28117 A 15 15
224 Bulgaria 28118 T 15 15
225 Bulgaria 28119 A 15 15
226 Bulgaria 28120 T 15 15
227 Bulgaria 28121 C 15 15
228 Bulgaria 28122 G 15 15
229 Bulgaria 28123 G 15 15
230 Bulgaria 28124 T 15 15
231 Bulgaria 28125 A 15 15
232 Bulgaria 28126 A 15 15
233 Bulgaria 28127 T 15 15
234 Bulgaria 28128 T 15 15
235 Bulgaria 28129 A 15 15
236 Bulgaria 28130 T 15 15
237 Bulgaria 28131 A 15 15
238 Bulgaria 28132 C 15 15
239 Bulgaria 28133 A 15 15
240 Bulgaria 28134 G 15 15
241 Bulgaria 28135 T 15 15
242 Bulgaria 28136 T 15 15
243 Bulgaria 28137 T 15 15
244 Bulgaria 28138 C 15 15
245 Bulgaria 28139 C 15 15
246 Bulgaria 28140 T 15 15
247 Bulgaria 28141 G 15 15
248 Bulgaria 28142 T 15 15
249 Bulgaria 28143 T 15 15
250 Bulgaria 28144 T 15 15
251 Bulgaria 28145 A 15 15
252 Bulgaria 28146 C 15 15
253 Bulgaria 28147 C 15 15
254 Bulgaria 28148 T 15 15
255 Bulgaria 28149 T 15 15
256 Bulgaria 28150 T 15 15
257 Bulgaria 28151 T 15 15
258 Bulgaria 28152 A 15 15
259 Bulgaria 28153 C 15 15
260 Bulgaria 28154 A 15 15
261 Bulgaria 28155 A 15 15
262 Bulgaria 28156 T 15 15
263 Bulgaria 28157 T 15 15
264 Bulgaria 28158 A 15 15
265 Bulgaria 28159 A 15 15
266 Bulgaria 28160 T 15 15
267 Bulgaria 28161 T 15 15
268 Bulgaria 28162 G 15 15
269 Bulgaria 28163 C 15 15
270 Bulgaria 28164 C 15 15
271 Bulgaria 28165 A 15 15
272 Bulgaria 28166 G 15 15
273 Bulgaria 28167 G 15 15
274 Bulgaria 28168 A 15 15
275 Bulgaria 28169 A 15 15
276 Bulgaria 28170 C 15 15
277 Bulgaria 28171 C 15 15
278 Bulgaria 28172 T 15 15
279 Bulgaria 28173 A 15 15
280 Bulgaria 28174 A 15 15
281 Bulgaria 28175 A 15 15
282 Bulgaria 28176 T 15 15
283 Bulgaria 28177 T 15 15
284 Bulgaria 28178 G 15 15
285 Bulgaria 28179 G 15 15
286 Bulgaria 28180 G 15 15
287 Bulgaria 28181 T 15 15
288 Bulgaria 28182 A 15 15
289 Bulgaria 28183 G 15 15
290 Bulgaria 28184 T 15 15
291 Bulgaria 28185 C 15 15
292 Bulgaria 28186 T 15 15
293 Bulgaria 28187 T 15 15
294 Bulgaria 28188 G 15 15
295 Bulgaria 28189 T 15 15
296 Bulgaria 28190 A 15 15
297 Bulgaria 28191 G 15 15
298 Bulgaria 28192 T 15 15
299 Bulgaria 28193 G 15 15
300 Bulgaria 28194 C 15 15
301 Bulgaria 28195 G 15 15
302 Bulgaria 28196 T 15 15
303 Bulgaria 28197 T 15 15
304 Bulgaria 28198 G 15 15
305 Bulgaria 28199 T 15 15
306 Bulgaria 28200 T 15 15
307 Bulgaria 28201 C 15 15
308 Bulgaria 28202 G 15 15
309 Bulgaria 28203 T 15 15
310 Bulgaria 28204 T 15 15
311 Bulgaria 28205 C 15 15
312 Bulgaria 28206 T 15 15
313 Bulgaria 28207 A 15 15
314 Bulgaria 28208 T 15 15
315 Bulgaria 28209 G 15 15
316 Bulgaria 28210 A 15 15
317 Bulgaria 28211 A 15 15
318 Bulgaria 28212 G 15 15
319 Bulgaria 28213 A 15 15
320 Bulgaria 28214 C 15 15
321 Bulgaria 28215 T 15 15
322 Bulgaria 28216 T 15 15
323 Bulgaria 28217 T 15 15
324 Bulgaria 28218 T 15 15
325 Bulgaria 28219 T 15 15
326 Bulgaria 28220 A 15 15
327 Bulgaria 28221 G 15 15
328 Bulgaria 28222 A 15 15
329 Bulgaria 28223 G 15 15
330 Bulgaria 28224 T 15 15
331 Bulgaria 28225 A 15 15
332 Bulgaria 28226 T 15 15
333 Bulgaria 28227 C 15 15
334 Bulgaria 28228 A 15 15
335 Bulgaria 28229 T 15 15
336 Bulgaria 28230 G 15 15
337 Bulgaria 28231 A 15 15
338 Bulgaria 28232 C 15 15
339 Bulgaria 28233 G 15 15
340 Bulgaria 28234 T 15 15
341 Bulgaria 28235 T 15 15
342 Bulgaria 28236 C 15 15
343 Bulgaria 28237 G 15 15
344 Bulgaria 28238 T 15 15
345 Bulgaria 28239 G 15 15
346 Bulgaria 28240 T 15 15
347 Bulgaria 28241 T 15 15
348 Bulgaria 28242 G 15 15
349 Bulgaria 28243 T 15 15
350 Bulgaria 28244 T 15 15
351 Bulgaria 28245 T 15 15
352 Bulgaria 28246 T 15 15
353 Bulgaria 28247 A 15 15
354 Bulgaria 28248 G 15 15
355 Bulgaria 28249 A 15 15
356 Bulgaria 28250 T 15 15
357 Bulgaria 28251 T 15 15
358 Bulgaria 28252 T 15 15
359 Bulgaria 28253 C 15 15
360 Bulgaria 28254 A 15 15
361 Bulgaria 28255 T 15 15
362 Bulgaria 28256 C 15 15
363 Bulgaria 28257 T 15 15
364 Bulgaria 28258 A 15 15
365 Bulgaria 28259 A 15 15