National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A C D E F G H I K L M N P Q R S T V Y
*     3                                      
-     370                                      
?                                            
A     27                                      
C     18                                      
D     6                                      
E     24                                      
F     30                                      
G     12                                      
H     9                                      
I     25                                      
K     21                                      
L     45                                      
M     6                                      
N     6                                      
P     18                                      
Q     15                                      
R     15                                      
S     21                                      
T     30               1                      
V     24                                      
Y     15                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Uzbekistan 27394 A <*> 2 2
1 Uzbekistan 27395 T <*> 2 2
2 Uzbekistan 27396 G <*> 2 2
3 Uzbekistan 27397 A <*> 2 2
4 Uzbekistan 27398 A <*> 2 2
5 Uzbekistan 27399 A <*> 2 2
6 Uzbekistan 27400 A <*> 2 2
7 Uzbekistan 27401 T <*> 2 2
8 Uzbekistan 27402 T <*> 2 2
9 Uzbekistan 27403 A <*> 2 2
10 Uzbekistan 27404 T <*> 2 2
11 Uzbekistan 27405 T <*> 2 2
12 Uzbekistan 27406 C <*> 2 2
13 Uzbekistan 27407 T <*> 2 2
14 Uzbekistan 27408 T <*> 2 2
15 Uzbekistan 27409 T <*> 2 2
16 Uzbekistan 27410 T <*> 2 2
17 Uzbekistan 27411 C <*> 2 2
18 Uzbekistan 27412 T <*> 2 2
19 Uzbekistan 27413 T <*> 2 2
20 Uzbekistan 27414 G <*> 2 2
21 Uzbekistan 27415 G <*> 2 2
22 Uzbekistan 27416 C <*> 2 2
23 Uzbekistan 27417 A <*> 2 2
24 Uzbekistan 27418 C <*> 2 2
25 Uzbekistan 27419 T <*> 2 2
26 Uzbekistan 27420 G <*> 2 2
27 Uzbekistan 27421 A <*> 2 2
28 Uzbekistan 27422 T <*> 2 2
29 Uzbekistan 27423 A <*> 2 2
30 Uzbekistan 27424 A <*> 2 2
31 Uzbekistan 27425 C <*> 2 2
32 Uzbekistan 27426 A <*> 2 2
33 Uzbekistan 27427 C <*> 2 2
34 Uzbekistan 27428 T <*> 2 2
35 Uzbekistan 27429 C <*> 2 2
36 Uzbekistan 27430 G <*> 2 2
37 Uzbekistan 27431 C <*> 2 2
38 Uzbekistan 27432 T <*> 2 2
39 Uzbekistan 27433 A <*> 2 2
40 Uzbekistan 27434 C T,<*> 2 1 p.Thr14Ile
41 Uzbekistan 27435 T <*> 2 2
42 Uzbekistan 27436 T <*> 2 2
43 Uzbekistan 27437 G <*> 2 2
44 Uzbekistan 27438 T <*> 2 2
45 Uzbekistan 27439 G <*> 2 2
46 Uzbekistan 27440 A <*> 2 2
47 Uzbekistan 27441 G <*> 2 2
48 Uzbekistan 27442 C <*> 2 2
49 Uzbekistan 27443 T <*> 2 2
50 Uzbekistan 27444 T <*> 2 2
51 Uzbekistan 27445 T <*> 2 2
52 Uzbekistan 27446 A <*> 2 2
53 Uzbekistan 27447 T <*> 2 2
54 Uzbekistan 27448 C <*> 2 2
55 Uzbekistan 27449 A <*> 2 2
56 Uzbekistan 27450 C <*> 2 2
57 Uzbekistan 27451 T <*> 2 2
58 Uzbekistan 27452 A <*> 2 2
59 Uzbekistan 27453 C <*> 2 2
60 Uzbekistan 27454 C <*> 2 2
61 Uzbekistan 27455 A <*> 2 2
62 Uzbekistan 27456 A <*> 2 2
63 Uzbekistan 27457 G <*> 2 2
64 Uzbekistan 27458 A <*> 2 2
65 Uzbekistan 27459 G <*> 2 2
66 Uzbekistan 27460 T <*> 2 2
67 Uzbekistan 27461 G <*> 2 2
68 Uzbekistan 27462 T <*> 2 2
69 Uzbekistan 27463 G <*> 2 2
70 Uzbekistan 27464 T <*> 2 2
71 Uzbekistan 27465 T <*> 2 2
72 Uzbekistan 27466 A <*> 2 2
73 Uzbekistan 27467 G <*> 2 2
74 Uzbekistan 27468 A <*> 2 2
75 Uzbekistan 27469 G <*> 2 2
76 Uzbekistan 27470 G <*> 2 2
77 Uzbekistan 27471 T <*> 2 2
78 Uzbekistan 27472 A <*> 2 2
79 Uzbekistan 27473 C <*> 2 2
80 Uzbekistan 27474 A <*> 2 2
81 Uzbekistan 27475 A <*> 2 2
82 Uzbekistan 27476 C <*> 2 2
83 Uzbekistan 27477 A <*> 2 2
84 Uzbekistan 27478 G <*> 2 2
85 Uzbekistan 27479 T <*> 2 2
86 Uzbekistan 27480 A <*> 2 2
87 Uzbekistan 27481 C <*> 2 2
88 Uzbekistan 27482 T <*> 2 2
89 Uzbekistan 27483 T <*> 2 2
90 Uzbekistan 27484 T <*> 2 2
91 Uzbekistan 27485 T <*> 2 2
92 Uzbekistan 27486 A <*> 2 2
93 Uzbekistan 27487 A <*> 2 2
94 Uzbekistan 27488 A <*> 2 2
95 Uzbekistan 27489 A <*> 2 2
96 Uzbekistan 27490 G <*> 2 2
97 Uzbekistan 27491 A <*> 2 2
98 Uzbekistan 27492 A <*> 2 2
99 Uzbekistan 27493 C <*> 2 2
100 Uzbekistan 27494 C <*> 2 2
101 Uzbekistan 27495 T <*> 2 2
102 Uzbekistan 27496 T <*> 2 2
103 Uzbekistan 27497 G <*> 2 2
104 Uzbekistan 27498 C <*> 2 2
105 Uzbekistan 27499 T <*> 2 2
106 Uzbekistan 27500 C <*> 2 2
107 Uzbekistan 27501 T <*> 2 2
108 Uzbekistan 27502 T <*> 2 2
109 Uzbekistan 27503 C <*> 2 2
110 Uzbekistan 27504 T <*> 2 2
111 Uzbekistan 27505 G <*> 2 2
112 Uzbekistan 27506 G <*> 2 2
113 Uzbekistan 27507 A <*> 2 2
114 Uzbekistan 27508 A <*> 2 2
115 Uzbekistan 27509 C <*> 2 2
116 Uzbekistan 27510 A <*> 2 2
117 Uzbekistan 27511 T <*> 2 2
118 Uzbekistan 27512 A <*> 2 2
119 Uzbekistan 27513 C <*> 2 2
120 Uzbekistan 27514 G <*> 2 2
121 Uzbekistan 27515 A <*> 2 2
122 Uzbekistan 27516 G <*> 2 2
123 Uzbekistan 27517 G <*> 2 2
124 Uzbekistan 27518 G <*> 2 2
125 Uzbekistan 27519 C <*> 2 2
126 Uzbekistan 27520 A <*> 2 2
127 Uzbekistan 27521 A <*> 2 2
128 Uzbekistan 27522 T <*> 2 2
129 Uzbekistan 27523 T <*> 2 2
130 Uzbekistan 27524 C <*> 2 2
131 Uzbekistan 27525 A <*> 2 2
132 Uzbekistan 27526 C <*> 2 2
133 Uzbekistan 27527 C <*> 2 2
134 Uzbekistan 27528 A <*> 2 2
135 Uzbekistan 27529 T <*> 2 2
136 Uzbekistan 27530 T <*> 2 2
137 Uzbekistan 27531 T <*> 2 2
138 Uzbekistan 27532 C <*> 2 2
139 Uzbekistan 27533 A <*> 2 2
140 Uzbekistan 27534 T <*> 2 2
141 Uzbekistan 27535 C <*> 2 2
142 Uzbekistan 27536 C <*> 2 2
143 Uzbekistan 27537 T <*> 2 2
144 Uzbekistan 27538 C <*> 2 2
145 Uzbekistan 27539 T <*> 2 2
146 Uzbekistan 27540 A <*> 2 2
147 Uzbekistan 27541 G <*> 2 2
148 Uzbekistan 27542 C <*> 2 2
149 Uzbekistan 27543 T <*> 2 2
150 Uzbekistan 27544 G <*> 2 2
151 Uzbekistan 27545 A <*> 2 2
152 Uzbekistan 27546 T <*> 2 2
153 Uzbekistan 27547 A <*> 2 2
154 Uzbekistan 27548 A <*> 2 2
155 Uzbekistan 27549 C <*> 2 2
156 Uzbekistan 27550 A <*> 2 2
157 Uzbekistan 27551 A <*> 2 2
158 Uzbekistan 27552 A <*> 2 2
159 Uzbekistan 27553 T <*> 2 2
160 Uzbekistan 27554 T <*> 2 2
161 Uzbekistan 27555 T <*> 2 2
162 Uzbekistan 27556 G <*> 2 2
163 Uzbekistan 27557 C <*> 2 2
164 Uzbekistan 27558 A <*> 2 2
165 Uzbekistan 27559 C <*> 2 2
166 Uzbekistan 27560 T <*> 2 2
167 Uzbekistan 27561 G <*> 2 2
168 Uzbekistan 27562 A <*> 2 2
169 Uzbekistan 27563 C <*> 2 2
170 Uzbekistan 27564 T <*> 2 2
171 Uzbekistan 27565 T <*> 2 2
172 Uzbekistan 27566 G <*> 2 2
173 Uzbekistan 27567 C <*> 2 2
174 Uzbekistan 27568 T <*> 2 2
175 Uzbekistan 27569 T <*> 2 2
176 Uzbekistan 27570 T <*> 2 2
177 Uzbekistan 27571 A <*> 2 2
178 Uzbekistan 27572 G <*> 2 2
179 Uzbekistan 27573 C <*> 2 2
180 Uzbekistan 27574 A <*> 2 2
181 Uzbekistan 27575 C <*> 2 2
182 Uzbekistan 27576 T <*> 2 2
183 Uzbekistan 27577 C <*> 2 2
184 Uzbekistan 27578 A <*> 2 2
185 Uzbekistan 27579 A <*> 2 2
186 Uzbekistan 27580 T <*> 2 2
187 Uzbekistan 27581 T <*> 2 2
188 Uzbekistan 27582 T <*> 2 2
189 Uzbekistan 27583 G <*> 2 2
190 Uzbekistan 27584 C <*> 2 2
191 Uzbekistan 27585 T <*> 2 2
192 Uzbekistan 27586 T <*> 2 2
193 Uzbekistan 27587 T <*> 2 2
194 Uzbekistan 27588 T <*> 2 2
195 Uzbekistan 27589 G <*> 2 2
196 Uzbekistan 27590 C <*> 2 2
197 Uzbekistan 27591 T <*> 2 2
198 Uzbekistan 27592 T <*> 2 2
199 Uzbekistan 27593 G <*> 2 2
200 Uzbekistan 27594 T <*> 2 2
201 Uzbekistan 27595 C <*> 2 2
202 Uzbekistan 27596 C <*> 2 2
203 Uzbekistan 27597 T <*> 2 2
204 Uzbekistan 27598 G <*> 2 2
205 Uzbekistan 27599 A <*> 2 2
206 Uzbekistan 27600 C <*> 2 2
207 Uzbekistan 27601 G <*> 2 2
208 Uzbekistan 27602 G <*> 2 2
209 Uzbekistan 27603 C <*> 2 2
210 Uzbekistan 27604 G <*> 2 2
211 Uzbekistan 27605 T <*> 2 2
212 Uzbekistan 27606 A <*> 2 2
213 Uzbekistan 27607 A <*> 2 2
214 Uzbekistan 27608 A <*> 2 2
215 Uzbekistan 27609 A <*> 2 2
216 Uzbekistan 27610 C <*> 2 2
217 Uzbekistan 27611 A <*> 2 2
218 Uzbekistan 27612 C <*> 2 2
219 Uzbekistan 27613 G <*> 2 2
220 Uzbekistan 27614 T <*> 2 2
221 Uzbekistan 27615 C <*> 2 2
222 Uzbekistan 27616 T <*> 2 2
223 Uzbekistan 27617 A <*> 2 2
224 Uzbekistan 27618 T <*> 2 2
225 Uzbekistan 27619 C <*> 2 2
226 Uzbekistan 27620 A <*> 2 2
227 Uzbekistan 27621 G <*> 2 2
228 Uzbekistan 27622 T <*> 2 2
229 Uzbekistan 27623 T <*> 2 2
230 Uzbekistan 27624 A <*> 2 2
231 Uzbekistan 27625 C <*> 2 2
232 Uzbekistan 27626 G <*> 2 2
233 Uzbekistan 27627 T <*> 2 2
234 Uzbekistan 27628 G <*> 2 2
235 Uzbekistan 27629 C <*> 2 2
236 Uzbekistan 27630 C <*> 2 2
237 Uzbekistan 27631 A <*> 2 2
238 Uzbekistan 27632 G <*> 2 2
239 Uzbekistan 27633 A <*> 2 2
240 Uzbekistan 27634 T <*> 2 2
241 Uzbekistan 27635 C <*> 2 2
242 Uzbekistan 27636 A <*> 2 2
243 Uzbekistan 27637 G <*> 2 2
244 Uzbekistan 27638 T <*> 2 2
245 Uzbekistan 27639 T <*> 2 2
246 Uzbekistan 27640 T <*> 2 2
247 Uzbekistan 27641 C <*> 2 2
248 Uzbekistan 27642 A <*> 2 2
249 Uzbekistan 27643 C <*> 2 2
250 Uzbekistan 27644 C <*> 2 2
251 Uzbekistan 27645 T <*> 2 2
252 Uzbekistan 27646 A <*> 2 2
253 Uzbekistan 27647 A <*> 2 2
254 Uzbekistan 27648 A <*> 2 2
255 Uzbekistan 27649 C <*> 2 2
256 Uzbekistan 27650 T <*> 2 2
257 Uzbekistan 27651 G <*> 2 2
258 Uzbekistan 27652 T <*> 2 2
259 Uzbekistan 27653 T <*> 2 2
260 Uzbekistan 27654 C <*> 2 2
261 Uzbekistan 27655 A <*> 2 2
262 Uzbekistan 27656 T <*> 2 2
263 Uzbekistan 27657 C <*> 2 2
264 Uzbekistan 27658 A <*> 2 2
265 Uzbekistan 27659 G <*> 2 2
266 Uzbekistan 27660 A <*> 2 2
267 Uzbekistan 27661 C <*> 2 2
268 Uzbekistan 27662 A <*> 2 2
269 Uzbekistan 27663 A <*> 2 2
270 Uzbekistan 27664 G <*> 2 2
271 Uzbekistan 27665 A <*> 2 2
272 Uzbekistan 27666 G <*> 2 2
273 Uzbekistan 27667 G <*> 2 2
274 Uzbekistan 27668 A <*> 2 2
275 Uzbekistan 27669 A <*> 2 2
276 Uzbekistan 27670 G <*> 2 2
277 Uzbekistan 27671 T <*> 2 2
278 Uzbekistan 27672 T <*> 2 2
279 Uzbekistan 27673 C <*> 2 2
280 Uzbekistan 27674 A <*> 2 2
281 Uzbekistan 27675 A <*> 2 2
282 Uzbekistan 27676 G <*> 2 2
283 Uzbekistan 27677 A <*> 2 2
284 Uzbekistan 27678 A <*> 2 2
285 Uzbekistan 27679 C <*> 2 2
286 Uzbekistan 27680 T <*> 2 2
287 Uzbekistan 27681 T <*> 2 2
288 Uzbekistan 27682 T <*> 2 2
289 Uzbekistan 27683 A <*> 2 2
290 Uzbekistan 27684 C <*> 2 2
291 Uzbekistan 27685 T <*> 2 2
292 Uzbekistan 27686 C <*> 2 2
293 Uzbekistan 27687 T <*> 2 2
294 Uzbekistan 27688 C <*> 2 2
295 Uzbekistan 27689 C <*> 2 2
296 Uzbekistan 27690 A <*> 2 2
297 Uzbekistan 27691 A <*> 2 2
298 Uzbekistan 27692 T <*> 2 2
299 Uzbekistan 27693 T <*> 2 2
300 Uzbekistan 27694 T <*> 2 2
301 Uzbekistan 27695 T <*> 2 2
302 Uzbekistan 27696 T <*> 2 2
303 Uzbekistan 27697 C <*> 2 2
304 Uzbekistan 27698 T <*> 2 2
305 Uzbekistan 27699 T <*> 2 2
306 Uzbekistan 27700 A <*> 2 2
307 Uzbekistan 27701 T <*> 2 2
308 Uzbekistan 27702 T <*> 2 2
309 Uzbekistan 27703 G <*> 2 2
310 Uzbekistan 27704 T <*> 2 2
311 Uzbekistan 27705 T <*> 2 2
312 Uzbekistan 27706 G <*> 2 2
313 Uzbekistan 27707 C <*> 2 2
314 Uzbekistan 27708 G <*> 2 2
315 Uzbekistan 27709 G <*> 2 2
316 Uzbekistan 27710 C <*> 2 2
317 Uzbekistan 27711 A <*> 2 2
318 Uzbekistan 27712 A <*> 2 2
319 Uzbekistan 27713 T <*> 2 2
320 Uzbekistan 27714 A <*> 2 2
321 Uzbekistan 27715 G <*> 2 2
322 Uzbekistan 27716 T <*> 2 2
323 Uzbekistan 27717 G <*> 2 2
324 Uzbekistan 27718 T <*> 2 2
325 Uzbekistan 27719 T <*> 2 2
326 Uzbekistan 27720 T <*> 2 2
327 Uzbekistan 27721 A <*> 2 2
328 Uzbekistan 27722 T <*> 2 2
329 Uzbekistan 27723 A <*> 2 2
330 Uzbekistan 27724 A <*> 2 2
331 Uzbekistan 27725 C <*> 2 2
332 Uzbekistan 27726 A <*> 2 2
333 Uzbekistan 27727 C <*> 2 2
334 Uzbekistan 27728 T <*> 2 2
335 Uzbekistan 27729 T <*> 2 2
336 Uzbekistan 27730 T <*> 2 2
337 Uzbekistan 27731 G <*> 2 2
338 Uzbekistan 27732 C <*> 2 2
339 Uzbekistan 27733 T <*> 2 2
340 Uzbekistan 27734 T <*> 2 2
341 Uzbekistan 27735 C <*> 2 2
342 Uzbekistan 27736 A <*> 2 2
343 Uzbekistan 27737 C <*> 2 2
344 Uzbekistan 27738 A <*> 2 2
345 Uzbekistan 27739 C <*> 2 2
346 Uzbekistan 27740 T <*> 2 2
347 Uzbekistan 27741 C <*> 2 2
348 Uzbekistan 27742 A <*> 2 2
349 Uzbekistan 27743 A <*> 2 2
350 Uzbekistan 27744 A <*> 2 2
351 Uzbekistan 27745 A <*> 2 2
352 Uzbekistan 27746 G <*> 2 2
353 Uzbekistan 27747 A <*> 2 2
354 Uzbekistan 27748 A <*> 2 2
355 Uzbekistan 27749 A <*> 2 2
356 Uzbekistan 27750 G <*> 2 2
357 Uzbekistan 27751 A <*> 2 2
358 Uzbekistan 27752 C <*> 2 2
359 Uzbekistan 27753 A <*> 2 2
360 Uzbekistan 27754 G <*> 2 2
361 Uzbekistan 27755 A <*> 2 2
362 Uzbekistan 27756 A <*> 2 2 p.Met1fs
363 Uzbekistan 27757 T <*> 2 2 p.Met1fs
364 Uzbekistan 27758 G <*> 2 2 p.Met1fs
365 Uzbekistan 27759 A <*> 2 2 p.Ter122delins??????