National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A C D E F G H I K L M N P Q R S T V Y
*     3                                      
-     370                                      
?                                            
A     27                                      
C     18                                      
D     6                                      
E     24                                      
F     30                                      
G     12                                      
H     9                                      
I     25                                      
K     21                                      
L     45                                      
M     6                                      
N     6                                      
P     18                                      
Q     15                                      
R     15                                      
S     21                                      
T     30                                      
V     24                                      
Y     15                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Suriname 27394 A 71 71
1 Suriname 27395 T 71 71
2 Suriname 27396 G 71 71
3 Suriname 27397 A 71 71
4 Suriname 27398 A 71 71
5 Suriname 27399 A 71 71
6 Suriname 27400 A 71 71
7 Suriname 27401 T 71 71
8 Suriname 27402 T 71 71
9 Suriname 27403 A 71 71
10 Suriname 27404 T 71 71
11 Suriname 27405 T 71 71
12 Suriname 27406 C 71 71
13 Suriname 27407 T 71 71
14 Suriname 27408 T 71 71
15 Suriname 27409 T 71 71
16 Suriname 27410 T 71 71
17 Suriname 27411 C 71 71
18 Suriname 27412 T 71 71
19 Suriname 27413 T 71 71
20 Suriname 27414 G 71 71
21 Suriname 27415 G 71 71
22 Suriname 27416 C 71 71
23 Suriname 27417 A 71 71
24 Suriname 27418 C 71 71
25 Suriname 27419 T 71 71
26 Suriname 27420 G 71 71
27 Suriname 27421 A 71 71
28 Suriname 27422 T 71 71
29 Suriname 27423 A 71 71
30 Suriname 27424 A 71 71
31 Suriname 27425 C 71 71
32 Suriname 27426 A 71 71
33 Suriname 27427 C 71 71
34 Suriname 27428 T 71 71
35 Suriname 27429 C 71 71
36 Suriname 27430 G 71 71
37 Suriname 27431 C 71 71
38 Suriname 27432 T 71 71
39 Suriname 27433 A 71 71
40 Suriname 27434 C 71 71
41 Suriname 27435 T 71 71
42 Suriname 27436 T 71 71
43 Suriname 27437 G 71 71
44 Suriname 27438 T 71 71
45 Suriname 27439 G 71 71
46 Suriname 27440 A 71 71
47 Suriname 27441 G 71 71
48 Suriname 27442 C 71 71
49 Suriname 27443 T 71 71
50 Suriname 27444 T 71 71
51 Suriname 27445 T 71 71
52 Suriname 27446 A 71 71
53 Suriname 27447 T 71 71
54 Suriname 27448 C 71 71
55 Suriname 27449 A 71 71
56 Suriname 27450 C 71 71
57 Suriname 27451 T 71 71
58 Suriname 27452 A 71 71
59 Suriname 27453 C 71 71
60 Suriname 27454 C 71 71
61 Suriname 27455 A 71 71
62 Suriname 27456 A 71 71
63 Suriname 27457 G 71 71
64 Suriname 27458 A 71 71
65 Suriname 27459 G 71 71
66 Suriname 27460 T 71 71
67 Suriname 27461 G 71 71
68 Suriname 27462 T 71 71
69 Suriname 27463 G 71 71
70 Suriname 27464 T 71 71
71 Suriname 27465 T 71 71
72 Suriname 27466 A 71 71
73 Suriname 27467 G 71 71
74 Suriname 27468 A 71 71
75 Suriname 27469 G 71 71
76 Suriname 27470 G 71 71
77 Suriname 27471 T 71 71
78 Suriname 27472 A 71 71
79 Suriname 27473 C 71 71
80 Suriname 27474 A 71 71
81 Suriname 27475 A 71 71
82 Suriname 27476 C 71 71
83 Suriname 27477 A 71 71
84 Suriname 27478 G 71 71
85 Suriname 27479 T 71 71
86 Suriname 27480 A 71 71
87 Suriname 27481 C 71 71
88 Suriname 27482 T 71 71
89 Suriname 27483 T 71 71
90 Suriname 27484 T 71 71
91 Suriname 27485 T 71 71
92 Suriname 27486 A 71 71
93 Suriname 27487 A 71 71
94 Suriname 27488 A 71 71
95 Suriname 27489 A 71 71
96 Suriname 27490 G 71 71
97 Suriname 27491 A 71 71
98 Suriname 27492 A 71 71
99 Suriname 27493 C 71 71
100 Suriname 27494 C 71 71
101 Suriname 27495 T 71 71
102 Suriname 27496 T 71 71
103 Suriname 27497 G 71 71
104 Suriname 27498 C 71 71
105 Suriname 27499 T 71 71
106 Suriname 27500 C 71 71
107 Suriname 27501 T 71 71
108 Suriname 27502 T 71 71
109 Suriname 27503 C 71 71
110 Suriname 27504 T 71 71
111 Suriname 27505 G 71 71
112 Suriname 27506 G 71 71
113 Suriname 27507 A 71 71
114 Suriname 27508 A 71 71
115 Suriname 27509 C 71 71
116 Suriname 27510 A 71 71
117 Suriname 27511 T 71 71
118 Suriname 27512 A 71 71
119 Suriname 27513 C 71 71
120 Suriname 27514 G 71 71
121 Suriname 27515 A 71 71
122 Suriname 27516 G 71 71
123 Suriname 27517 G 71 71
124 Suriname 27518 G 71 71
125 Suriname 27519 C 71 71
126 Suriname 27520 A 71 71
127 Suriname 27521 A 71 71
128 Suriname 27522 T 71 71
129 Suriname 27523 T 71 71
130 Suriname 27524 C 71 71
131 Suriname 27525 A 71 71
132 Suriname 27526 C 71 71
133 Suriname 27527 C 71 71
134 Suriname 27528 A 71 71
135 Suriname 27529 T 71 71
136 Suriname 27530 T 71 71
137 Suriname 27531 T 71 71
138 Suriname 27532 C 71 71
139 Suriname 27533 A 71 71
140 Suriname 27534 T 71 71
141 Suriname 27535 C 71 71
142 Suriname 27536 C 71 71
143 Suriname 27537 T 71 71
144 Suriname 27538 C 71 71
145 Suriname 27539 T 71 71
146 Suriname 27540 A 71 71
147 Suriname 27541 G 71 71
148 Suriname 27542 C 71 71
149 Suriname 27543 T 71 71
150 Suriname 27544 G 71 71
151 Suriname 27545 A 71 71
152 Suriname 27546 T 71 71
153 Suriname 27547 A 71 71
154 Suriname 27548 A 71 71
155 Suriname 27549 C 71 71
156 Suriname 27550 A 71 71
157 Suriname 27551 A 71 71
158 Suriname 27552 A 71 71
159 Suriname 27553 T 71 71
160 Suriname 27554 T 71 71
161 Suriname 27555 T 71 71
162 Suriname 27556 G 71 71
163 Suriname 27557 C 71 71
164 Suriname 27558 A 71 71
165 Suriname 27559 C 71 71
166 Suriname 27560 T 71 71
167 Suriname 27561 G 71 71
168 Suriname 27562 A 71 71
169 Suriname 27563 C 71 71
170 Suriname 27564 T 71 71
171 Suriname 27565 T 71 71
172 Suriname 27566 G 71 71
173 Suriname 27567 C 71 71
174 Suriname 27568 T 71 71
175 Suriname 27569 T 71 71
176 Suriname 27570 T 71 71
177 Suriname 27571 A 71 71
178 Suriname 27572 G 71 71
179 Suriname 27573 C 71 71
180 Suriname 27574 A 71 71
181 Suriname 27575 C 71 71
182 Suriname 27576 T 71 71
183 Suriname 27577 C 71 71
184 Suriname 27578 A 71 71
185 Suriname 27579 A 71 71
186 Suriname 27580 T 71 71
187 Suriname 27581 T 71 71
188 Suriname 27582 T 71 71
189 Suriname 27583 G 71 71
190 Suriname 27584 C 71 71
191 Suriname 27585 T 71 71
192 Suriname 27586 T 71 71
193 Suriname 27587 T 71 71
194 Suriname 27588 T 71 71
195 Suriname 27589 G 71 71
196 Suriname 27590 C 71 71
197 Suriname 27591 T 71 71
198 Suriname 27592 T 71 71
199 Suriname 27593 G 71 71
200 Suriname 27594 T 71 71
201 Suriname 27595 C 71 71
202 Suriname 27596 C 71 71
203 Suriname 27597 T 71 71
204 Suriname 27598 G 71 71
205 Suriname 27599 A 71 71
206 Suriname 27600 C 71 71
207 Suriname 27601 G 71 71
208 Suriname 27602 G 71 71
209 Suriname 27603 C 71 71
210 Suriname 27604 G 71 71
211 Suriname 27605 T 71 71
212 Suriname 27606 A 71 71
213 Suriname 27607 A 71 71
214 Suriname 27608 A 71 71
215 Suriname 27609 A 71 71
216 Suriname 27610 C 71 71
217 Suriname 27611 A 71 71
218 Suriname 27612 C 71 71
219 Suriname 27613 G 71 71
220 Suriname 27614 T 71 71
221 Suriname 27615 C 71 71
222 Suriname 27616 T 71 71
223 Suriname 27617 A 71 71
224 Suriname 27618 T 71 71
225 Suriname 27619 C 71 71
226 Suriname 27620 A 71 71
227 Suriname 27621 G 71 71
228 Suriname 27622 T 71 71
229 Suriname 27623 T 71 71
230 Suriname 27624 A 71 71
231 Suriname 27625 C 71 71
232 Suriname 27626 G 71 71
233 Suriname 27627 T 71 71
234 Suriname 27628 G 71 71
235 Suriname 27629 C 71 71
236 Suriname 27630 C 71 71
237 Suriname 27631 A 71 71
238 Suriname 27632 G 71 71
239 Suriname 27633 A 71 71
240 Suriname 27634 T 71 71
241 Suriname 27635 C 71 71
242 Suriname 27636 A 71 71
243 Suriname 27637 G 71 71
244 Suriname 27638 T 71 71
245 Suriname 27639 T 71 71
246 Suriname 27640 T 71 71
247 Suriname 27641 C 71 71
248 Suriname 27642 A 71 71
249 Suriname 27643 C 71 71
250 Suriname 27644 C 71 71
251 Suriname 27645 T 71 71
252 Suriname 27646 A 71 71
253 Suriname 27647 A 71 71
254 Suriname 27648 A 71 71
255 Suriname 27649 C 71 71
256 Suriname 27650 T 71 71
257 Suriname 27651 G 71 71
258 Suriname 27652 T 71 71
259 Suriname 27653 T 71 71
260 Suriname 27654 C 71 71
261 Suriname 27655 A 71 71
262 Suriname 27656 T 71 71
263 Suriname 27657 C 71 71
264 Suriname 27658 A 71 71
265 Suriname 27659 G 71 71
266 Suriname 27660 A 71 71
267 Suriname 27661 C 71 71
268 Suriname 27662 A 71 71
269 Suriname 27663 A 71 71
270 Suriname 27664 G 71 71
271 Suriname 27665 A 71 71
272 Suriname 27666 G 71 71
273 Suriname 27667 G 71 71
274 Suriname 27668 A 71 71
275 Suriname 27669 A 71 71
276 Suriname 27670 G 71 71
277 Suriname 27671 T 71 71
278 Suriname 27672 T 71 71
279 Suriname 27673 C 71 71
280 Suriname 27674 A 71 71
281 Suriname 27675 A 71 71
282 Suriname 27676 G 71 71
283 Suriname 27677 A 71 71
284 Suriname 27678 A 71 71
285 Suriname 27679 C 71 71
286 Suriname 27680 T 71 71
287 Suriname 27681 T 71 71
288 Suriname 27682 T 71 71
289 Suriname 27683 A 71 71
290 Suriname 27684 C 71 71
291 Suriname 27685 T 71 71
292 Suriname 27686 C 71 71
293 Suriname 27687 T 71 71
294 Suriname 27688 C 71 71
295 Suriname 27689 C 71 71
296 Suriname 27690 A 71 71
297 Suriname 27691 A 71 71
298 Suriname 27692 T 71 71
299 Suriname 27693 T 71 71
300 Suriname 27694 T 71 71
301 Suriname 27695 T 71 71
302 Suriname 27696 T 71 71
303 Suriname 27697 C 71 71
304 Suriname 27698 T 71 71
305 Suriname 27699 T 71 71
306 Suriname 27700 A 71 71
307 Suriname 27701 T 71 71
308 Suriname 27702 T 71 71
309 Suriname 27703 G 71 71
310 Suriname 27704 T 71 71
311 Suriname 27705 T 71 71
312 Suriname 27706 G 71 71
313 Suriname 27707 C 71 71
314 Suriname 27708 G 71 71
315 Suriname 27709 G 71 71
316 Suriname 27710 C 71 71
317 Suriname 27711 A 71 71
318 Suriname 27712 A 71 71
319 Suriname 27713 T 71 71
320 Suriname 27714 A 71 71
321 Suriname 27715 G 71 71
322 Suriname 27716 T 71 71
323 Suriname 27717 G 71 71
324 Suriname 27718 T 71 71
325 Suriname 27719 T 71 71
326 Suriname 27720 T 71 71
327 Suriname 27721 A 71 71
328 Suriname 27722 T 71 71
329 Suriname 27723 A 71 71
330 Suriname 27724 A 71 71
331 Suriname 27725 C 71 71
332 Suriname 27726 A 71 71
333 Suriname 27727 C 71 71
334 Suriname 27728 T 71 71
335 Suriname 27729 T 71 71
336 Suriname 27730 T 71 71
337 Suriname 27731 G 71 71
338 Suriname 27732 C 71 71
339 Suriname 27733 T 71 71
340 Suriname 27734 T 71 71
341 Suriname 27735 C 71 71
342 Suriname 27736 A 71 71
343 Suriname 27737 C 71 71
344 Suriname 27738 A 71 71
345 Suriname 27739 C 71 71
346 Suriname 27740 T 71 71
347 Suriname 27741 C 71 71
348 Suriname 27742 A 71 71
349 Suriname 27743 A 71 71
350 Suriname 27744 A 71 71
351 Suriname 27745 A 71 71
352 Suriname 27746 G 71 71
353 Suriname 27747 A 71 71
354 Suriname 27748 A 71 71
355 Suriname 27749 A 71 71
356 Suriname 27750 G 71 71
357 Suriname 27751 A 71 71
358 Suriname 27752 C 71 71
359 Suriname 27753 A 71 71
360 Suriname 27754 G 71 71
361 Suriname 27755 A 71 71
362 Suriname 27756 A 71 71
363 Suriname 27757 T 71 71
364 Suriname 27758 G 71 71
365 Suriname 27759 A 71 71