National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A C D E F G H I K L M N P Q R S T V Y
*     3                                      
-     370                                      
?                                            
A     27                                      
C     18                                      
D     6                                      
E     24                                      
F     30                                      
G     12                                      
H     9                                      
I     25                                      
K     21                                      
L     45                                      
M     6                                      
N     6                                      
P     18                                      
Q     15                                      
R     15                                      
S     21                                      
T     30                                      
V     24                                      
Y     15                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Republic_of_Congo 27394 A 11 11
1 Republic_of_Congo 27395 T 11 11
2 Republic_of_Congo 27396 G 11 11
3 Republic_of_Congo 27397 A 11 11
4 Republic_of_Congo 27398 A 11 11
5 Republic_of_Congo 27399 A 11 11
6 Republic_of_Congo 27400 A 11 11
7 Republic_of_Congo 27401 T 11 11
8 Republic_of_Congo 27402 T 11 11
9 Republic_of_Congo 27403 A 11 11
10 Republic_of_Congo 27404 T 11 11
11 Republic_of_Congo 27405 T 11 11
12 Republic_of_Congo 27406 C 11 11
13 Republic_of_Congo 27407 T 11 11
14 Republic_of_Congo 27408 T 11 11
15 Republic_of_Congo 27409 T 11 11
16 Republic_of_Congo 27410 T 11 11
17 Republic_of_Congo 27411 C 11 11
18 Republic_of_Congo 27412 T 11 11
19 Republic_of_Congo 27413 T 11 11
20 Republic_of_Congo 27414 G 11 11
21 Republic_of_Congo 27415 G 11 11
22 Republic_of_Congo 27416 C 11 11
23 Republic_of_Congo 27417 A 11 11
24 Republic_of_Congo 27418 C 11 11
25 Republic_of_Congo 27419 T 11 11
26 Republic_of_Congo 27420 G 11 11
27 Republic_of_Congo 27421 A 11 11
28 Republic_of_Congo 27422 T 11 11
29 Republic_of_Congo 27423 A 11 11
30 Republic_of_Congo 27424 A 11 11
31 Republic_of_Congo 27425 C 11 11
32 Republic_of_Congo 27426 A 11 11
33 Republic_of_Congo 27427 C 11 11
34 Republic_of_Congo 27428 T 11 11
35 Republic_of_Congo 27429 C 11 11
36 Republic_of_Congo 27430 G 11 11
37 Republic_of_Congo 27431 C 11 11
38 Republic_of_Congo 27432 T 11 11
39 Republic_of_Congo 27433 A 11 11
40 Republic_of_Congo 27434 C 11 11
41 Republic_of_Congo 27435 T 11 11
42 Republic_of_Congo 27436 T 11 11
43 Republic_of_Congo 27437 G 11 11
44 Republic_of_Congo 27438 T 11 11
45 Republic_of_Congo 27439 G 11 11
46 Republic_of_Congo 27440 A 11 11
47 Republic_of_Congo 27441 G 11 11
48 Republic_of_Congo 27442 C 11 11
49 Republic_of_Congo 27443 T 11 11
50 Republic_of_Congo 27444 T 11 11
51 Republic_of_Congo 27445 T 11 11
52 Republic_of_Congo 27446 A 11 11
53 Republic_of_Congo 27447 T 11 11
54 Republic_of_Congo 27448 C 11 11
55 Republic_of_Congo 27449 A 11 11
56 Republic_of_Congo 27450 C 11 11
57 Republic_of_Congo 27451 T 11 11
58 Republic_of_Congo 27452 A 11 11
59 Republic_of_Congo 27453 C 11 11
60 Republic_of_Congo 27454 C 11 11
61 Republic_of_Congo 27455 A 11 11
62 Republic_of_Congo 27456 A 11 11
63 Republic_of_Congo 27457 G 11 11
64 Republic_of_Congo 27458 A 11 11
65 Republic_of_Congo 27459 G 11 11
66 Republic_of_Congo 27460 T 11 11
67 Republic_of_Congo 27461 G 11 11
68 Republic_of_Congo 27462 T 11 11
69 Republic_of_Congo 27463 G 11 11
70 Republic_of_Congo 27464 T 11 11
71 Republic_of_Congo 27465 T 11 11
72 Republic_of_Congo 27466 A 11 11
73 Republic_of_Congo 27467 G 11 11
74 Republic_of_Congo 27468 A 11 11
75 Republic_of_Congo 27469 G 11 11
76 Republic_of_Congo 27470 G 11 11
77 Republic_of_Congo 27471 T 11 11
78 Republic_of_Congo 27472 A 11 11
79 Republic_of_Congo 27473 C 11 11
80 Republic_of_Congo 27474 A 11 11
81 Republic_of_Congo 27475 A 11 11
82 Republic_of_Congo 27476 C 11 11
83 Republic_of_Congo 27477 A 11 11
84 Republic_of_Congo 27478 G 11 11
85 Republic_of_Congo 27479 T 11 11
86 Republic_of_Congo 27480 A 11 11
87 Republic_of_Congo 27481 C 11 11
88 Republic_of_Congo 27482 T 11 11
89 Republic_of_Congo 27483 T 11 11
90 Republic_of_Congo 27484 T 11 11
91 Republic_of_Congo 27485 T 11 11
92 Republic_of_Congo 27486 A 11 11
93 Republic_of_Congo 27487 A 11 11
94 Republic_of_Congo 27488 A 11 11
95 Republic_of_Congo 27489 A 11 11
96 Republic_of_Congo 27490 G 11 11
97 Republic_of_Congo 27491 A 11 11
98 Republic_of_Congo 27492 A 11 11
99 Republic_of_Congo 27493 C 11 11
100 Republic_of_Congo 27494 C 11 11
101 Republic_of_Congo 27495 T 11 11
102 Republic_of_Congo 27496 T 11 11
103 Republic_of_Congo 27497 G 11 11
104 Republic_of_Congo 27498 C 11 11
105 Republic_of_Congo 27499 T 11 11
106 Republic_of_Congo 27500 C 11 11
107 Republic_of_Congo 27501 T 11 11
108 Republic_of_Congo 27502 T 11 11
109 Republic_of_Congo 27503 C 11 11
110 Republic_of_Congo 27504 T 11 11
111 Republic_of_Congo 27505 G 11 11
112 Republic_of_Congo 27506 G 11 11
113 Republic_of_Congo 27507 A 11 11
114 Republic_of_Congo 27508 A 11 11
115 Republic_of_Congo 27509 C 11 11
116 Republic_of_Congo 27510 A 11 11
117 Republic_of_Congo 27511 T 11 11
118 Republic_of_Congo 27512 A 11 11
119 Republic_of_Congo 27513 C 11 11
120 Republic_of_Congo 27514 G 11 11
121 Republic_of_Congo 27515 A 11 11
122 Republic_of_Congo 27516 G 11 11
123 Republic_of_Congo 27517 G 11 11
124 Republic_of_Congo 27518 G 11 11
125 Republic_of_Congo 27519 C 11 11
126 Republic_of_Congo 27520 A 11 11
127 Republic_of_Congo 27521 A 11 11
128 Republic_of_Congo 27522 T 11 11
129 Republic_of_Congo 27523 T 11 11
130 Republic_of_Congo 27524 C 11 11
131 Republic_of_Congo 27525 A 11 11
132 Republic_of_Congo 27526 C 11 11
133 Republic_of_Congo 27527 C 11 11
134 Republic_of_Congo 27528 A 11 11
135 Republic_of_Congo 27529 T 11 11
136 Republic_of_Congo 27530 T 11 11
137 Republic_of_Congo 27531 T 11 11
138 Republic_of_Congo 27532 C 11 11
139 Republic_of_Congo 27533 A 11 11
140 Republic_of_Congo 27534 T 11 11
141 Republic_of_Congo 27535 C 11 11
142 Republic_of_Congo 27536 C 11 11
143 Republic_of_Congo 27537 T 11 11
144 Republic_of_Congo 27538 C 11 11
145 Republic_of_Congo 27539 T 11 11
146 Republic_of_Congo 27540 A 11 11
147 Republic_of_Congo 27541 G 11 11
148 Republic_of_Congo 27542 C 11 11
149 Republic_of_Congo 27543 T 11 11
150 Republic_of_Congo 27544 G 11 11
151 Republic_of_Congo 27545 A 11 11
152 Republic_of_Congo 27546 T 11 11
153 Republic_of_Congo 27547 A 11 11
154 Republic_of_Congo 27548 A 11 11
155 Republic_of_Congo 27549 C 11 11
156 Republic_of_Congo 27550 A 11 11
157 Republic_of_Congo 27551 A 11 11
158 Republic_of_Congo 27552 A 11 11
159 Republic_of_Congo 27553 T 11 11
160 Republic_of_Congo 27554 T 11 11
161 Republic_of_Congo 27555 T 11 11
162 Republic_of_Congo 27556 G 11 11
163 Republic_of_Congo 27557 C 11 11
164 Republic_of_Congo 27558 A 11 11
165 Republic_of_Congo 27559 C 11 11
166 Republic_of_Congo 27560 T 11 11
167 Republic_of_Congo 27561 G 11 11
168 Republic_of_Congo 27562 A 11 11
169 Republic_of_Congo 27563 C 11 11
170 Republic_of_Congo 27564 T 11 11
171 Republic_of_Congo 27565 T 11 11
172 Republic_of_Congo 27566 G 11 11
173 Republic_of_Congo 27567 C 11 11
174 Republic_of_Congo 27568 T 11 11
175 Republic_of_Congo 27569 T 11 11
176 Republic_of_Congo 27570 T 11 11
177 Republic_of_Congo 27571 A 11 11
178 Republic_of_Congo 27572 G 11 11
179 Republic_of_Congo 27573 C 11 11
180 Republic_of_Congo 27574 A 11 11
181 Republic_of_Congo 27575 C 11 11
182 Republic_of_Congo 27576 T 11 11
183 Republic_of_Congo 27577 C 11 11
184 Republic_of_Congo 27578 A 11 11
185 Republic_of_Congo 27579 A 11 11
186 Republic_of_Congo 27580 T 11 11
187 Republic_of_Congo 27581 T 11 11
188 Republic_of_Congo 27582 T 11 11
189 Republic_of_Congo 27583 G 11 11
190 Republic_of_Congo 27584 C 11 11
191 Republic_of_Congo 27585 T 11 11
192 Republic_of_Congo 27586 T 11 11
193 Republic_of_Congo 27587 T 11 11
194 Republic_of_Congo 27588 T 11 11
195 Republic_of_Congo 27589 G 11 11
196 Republic_of_Congo 27590 C 11 11
197 Republic_of_Congo 27591 T 11 11
198 Republic_of_Congo 27592 T 11 11
199 Republic_of_Congo 27593 G 11 11
200 Republic_of_Congo 27594 T 11 11
201 Republic_of_Congo 27595 C 11 11
202 Republic_of_Congo 27596 C 11 11
203 Republic_of_Congo 27597 T 11 11
204 Republic_of_Congo 27598 G 11 11
205 Republic_of_Congo 27599 A 11 11
206 Republic_of_Congo 27600 C 11 11
207 Republic_of_Congo 27601 G 11 11
208 Republic_of_Congo 27602 G 11 11
209 Republic_of_Congo 27603 C 11 11
210 Republic_of_Congo 27604 G 11 11
211 Republic_of_Congo 27605 T 11 11
212 Republic_of_Congo 27606 A 11 11
213 Republic_of_Congo 27607 A 11 11
214 Republic_of_Congo 27608 A 11 11
215 Republic_of_Congo 27609 A 11 11
216 Republic_of_Congo 27610 C 11 11
217 Republic_of_Congo 27611 A 11 11
218 Republic_of_Congo 27612 C 11 11
219 Republic_of_Congo 27613 G 11 11
220 Republic_of_Congo 27614 T 11 11
221 Republic_of_Congo 27615 C 11 11
222 Republic_of_Congo 27616 T 11 11
223 Republic_of_Congo 27617 A 11 11
224 Republic_of_Congo 27618 T 11 11
225 Republic_of_Congo 27619 C 11 11
226 Republic_of_Congo 27620 A 11 11
227 Republic_of_Congo 27621 G 11 11
228 Republic_of_Congo 27622 T 11 11
229 Republic_of_Congo 27623 T 11 11
230 Republic_of_Congo 27624 A 11 11
231 Republic_of_Congo 27625 C 11 11
232 Republic_of_Congo 27626 G 11 11
233 Republic_of_Congo 27627 T 11 11
234 Republic_of_Congo 27628 G 11 11
235 Republic_of_Congo 27629 C 11 11
236 Republic_of_Congo 27630 C 11 11
237 Republic_of_Congo 27631 A 11 11
238 Republic_of_Congo 27632 G 11 11
239 Republic_of_Congo 27633 A 11 11
240 Republic_of_Congo 27634 T 11 11
241 Republic_of_Congo 27635 C 11 11
242 Republic_of_Congo 27636 A 11 11
243 Republic_of_Congo 27637 G 11 11
244 Republic_of_Congo 27638 T 11 11
245 Republic_of_Congo 27639 T 11 11
246 Republic_of_Congo 27640 T 11 11
247 Republic_of_Congo 27641 C 11 11
248 Republic_of_Congo 27642 A 11 11
249 Republic_of_Congo 27643 C 11 11
250 Republic_of_Congo 27644 C 11 11
251 Republic_of_Congo 27645 T 11 11
252 Republic_of_Congo 27646 A 11 11
253 Republic_of_Congo 27647 A 11 11
254 Republic_of_Congo 27648 A 11 11
255 Republic_of_Congo 27649 C 11 11
256 Republic_of_Congo 27650 T 11 11
257 Republic_of_Congo 27651 G 11 11
258 Republic_of_Congo 27652 T 11 11
259 Republic_of_Congo 27653 T 11 11
260 Republic_of_Congo 27654 C 11 11
261 Republic_of_Congo 27655 A 11 11
262 Republic_of_Congo 27656 T 11 11
263 Republic_of_Congo 27657 C 11 11
264 Republic_of_Congo 27658 A 11 11
265 Republic_of_Congo 27659 G 11 11
266 Republic_of_Congo 27660 A 11 11
267 Republic_of_Congo 27661 C 11 11
268 Republic_of_Congo 27662 A 11 11
269 Republic_of_Congo 27663 A 11 11
270 Republic_of_Congo 27664 G 11 11
271 Republic_of_Congo 27665 A 11 11
272 Republic_of_Congo 27666 G 11 11
273 Republic_of_Congo 27667 G 11 11
274 Republic_of_Congo 27668 A 11 11
275 Republic_of_Congo 27669 A 11 11
276 Republic_of_Congo 27670 G 11 11
277 Republic_of_Congo 27671 T 11 11
278 Republic_of_Congo 27672 T 11 11
279 Republic_of_Congo 27673 C 11 11
280 Republic_of_Congo 27674 A 11 11
281 Republic_of_Congo 27675 A 11 11
282 Republic_of_Congo 27676 G 11 11
283 Republic_of_Congo 27677 A 11 11
284 Republic_of_Congo 27678 A 11 11
285 Republic_of_Congo 27679 C 11 11
286 Republic_of_Congo 27680 T 11 11
287 Republic_of_Congo 27681 T 11 11
288 Republic_of_Congo 27682 T 11 11
289 Republic_of_Congo 27683 A 11 11
290 Republic_of_Congo 27684 C 11 11
291 Republic_of_Congo 27685 T 11 11
292 Republic_of_Congo 27686 C 11 11
293 Republic_of_Congo 27687 T 11 11
294 Republic_of_Congo 27688 C 11 11
295 Republic_of_Congo 27689 C 11 11
296 Republic_of_Congo 27690 A 11 11
297 Republic_of_Congo 27691 A 11 11
298 Republic_of_Congo 27692 T 11 11
299 Republic_of_Congo 27693 T 11 11
300 Republic_of_Congo 27694 T 11 11
301 Republic_of_Congo 27695 T 11 11
302 Republic_of_Congo 27696 T 11 11
303 Republic_of_Congo 27697 C 11 11
304 Republic_of_Congo 27698 T 11 11
305 Republic_of_Congo 27699 T 11 11
306 Republic_of_Congo 27700 A 11 11
307 Republic_of_Congo 27701 T 11 11
308 Republic_of_Congo 27702 T 11 11
309 Republic_of_Congo 27703 G 11 11
310 Republic_of_Congo 27704 T 11 11
311 Republic_of_Congo 27705 T 11 11
312 Republic_of_Congo 27706 G 11 11
313 Republic_of_Congo 27707 C 11 11
314 Republic_of_Congo 27708 G 11 11
315 Republic_of_Congo 27709 G 11 11
316 Republic_of_Congo 27710 C 11 11
317 Republic_of_Congo 27711 A 11 11
318 Republic_of_Congo 27712 A 11 11
319 Republic_of_Congo 27713 T 11 11
320 Republic_of_Congo 27714 A 11 11
321 Republic_of_Congo 27715 G 11 11
322 Republic_of_Congo 27716 T 11 11
323 Republic_of_Congo 27717 G 11 11
324 Republic_of_Congo 27718 T 11 11
325 Republic_of_Congo 27719 T 11 11
326 Republic_of_Congo 27720 T 11 11
327 Republic_of_Congo 27721 A 11 11
328 Republic_of_Congo 27722 T 11 11
329 Republic_of_Congo 27723 A 11 11
330 Republic_of_Congo 27724 A 11 11
331 Republic_of_Congo 27725 C 11 11
332 Republic_of_Congo 27726 A 11 11
333 Republic_of_Congo 27727 C 11 11
334 Republic_of_Congo 27728 T 11 11
335 Republic_of_Congo 27729 T 11 11
336 Republic_of_Congo 27730 T 11 11
337 Republic_of_Congo 27731 G 11 11
338 Republic_of_Congo 27732 C 11 11
339 Republic_of_Congo 27733 T 11 11
340 Republic_of_Congo 27734 T 11 11
341 Republic_of_Congo 27735 C 11 11
342 Republic_of_Congo 27736 A 11 11
343 Republic_of_Congo 27737 C 11 11
344 Republic_of_Congo 27738 A 11 11
345 Republic_of_Congo 27739 C 11 11
346 Republic_of_Congo 27740 T 11 11
347 Republic_of_Congo 27741 C 11 11
348 Republic_of_Congo 27742 A 11 11
349 Republic_of_Congo 27743 A 11 11
350 Republic_of_Congo 27744 A 11 11
351 Republic_of_Congo 27745 A 11 11
352 Republic_of_Congo 27746 G 11 11
353 Republic_of_Congo 27747 A 11 11
354 Republic_of_Congo 27748 A 11 11
355 Republic_of_Congo 27749 A 11 11
356 Republic_of_Congo 27750 G 11 11
357 Republic_of_Congo 27751 A 11 11
358 Republic_of_Congo 27752 C 11 11
359 Republic_of_Congo 27753 A 11 11
360 Republic_of_Congo 27754 G 11 11
361 Republic_of_Congo 27755 A 11 11
362 Republic_of_Congo 27756 A 11 11
363 Republic_of_Congo 27757 T 11 11
364 Republic_of_Congo 27758 G 11 11
365 Republic_of_Congo 27759 A 11 11