National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
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Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A C D E F G H I K L M N P Q R S T V Y
*     3                                      
-     370                                      
?                                            
A     27 1                                    
C     18                                      
D     6                       1              
E     24                                      
F     30                   1                  
G     12                                      
H     9                                      
I     25                                      
K     21                                      
L     45                                      
M     6                                      
N     6                                      
P     18                                      
Q     15                                      
R     15                                      
S     21                                      
T     30                                      
V     24         1                            
Y     15                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 North_Macedonia 27394 A 82 82
1 North_Macedonia 27395 T 82 82
2 North_Macedonia 27396 G 82 82
3 North_Macedonia 27397 A 82 82
4 North_Macedonia 27398 A 82 82
5 North_Macedonia 27399 A 82 82
6 North_Macedonia 27400 A 82 82
7 North_Macedonia 27401 T 82 82
8 North_Macedonia 27402 T 82 82
9 North_Macedonia 27403 A 82 82
10 North_Macedonia 27404 T 82 82
11 North_Macedonia 27405 T 82 82
12 North_Macedonia 27406 C 82 82
13 North_Macedonia 27407 T 82 82
14 North_Macedonia 27408 T 82 82
15 North_Macedonia 27409 T 82 82
16 North_Macedonia 27410 T 82 82
17 North_Macedonia 27411 C 82 82
18 North_Macedonia 27412 T 82 82
19 North_Macedonia 27413 T 82 82
20 North_Macedonia 27414 G 82 82
21 North_Macedonia 27415 G 82 82
22 North_Macedonia 27416 C 82 82
23 North_Macedonia 27417 A 82 82
24 North_Macedonia 27418 C 82 82
25 North_Macedonia 27419 T 82 82
26 North_Macedonia 27420 G 82 82
27 North_Macedonia 27421 A 82 82
28 North_Macedonia 27422 T 82 82
29 North_Macedonia 27423 A 82 82
30 North_Macedonia 27424 A 82 82
31 North_Macedonia 27425 C 82 82
32 North_Macedonia 27426 A 82 82
33 North_Macedonia 27427 C 82 82
34 North_Macedonia 27428 T 82 82
35 North_Macedonia 27429 C 82 82
36 North_Macedonia 27430 G 82 82
37 North_Macedonia 27431 C 82 82
38 North_Macedonia 27432 T 82 82
39 North_Macedonia 27433 A 82 82
40 North_Macedonia 27434 C 82 82
41 North_Macedonia 27435 T 82 82
42 North_Macedonia 27436 T 82 82
43 North_Macedonia 27437 G 82 82
44 North_Macedonia 27438 T 82 82
45 North_Macedonia 27439 G 82 82
46 North_Macedonia 27440 A 82 82
47 North_Macedonia 27441 G 82 82
48 North_Macedonia 27442 C 82 82
49 North_Macedonia 27443 T 82 82
50 North_Macedonia 27444 T 82 82
51 North_Macedonia 27445 T 82 82
52 North_Macedonia 27446 A 82 82
53 North_Macedonia 27447 T 82 82
54 North_Macedonia 27448 C 82 82
55 North_Macedonia 27449 A 82 82
56 North_Macedonia 27450 C 82 82
57 North_Macedonia 27451 T 82 82
58 North_Macedonia 27452 A 82 82
59 North_Macedonia 27453 C 82 82
60 North_Macedonia 27454 C 82 82
61 North_Macedonia 27455 A 82 82
62 North_Macedonia 27456 A 82 82
63 North_Macedonia 27457 G 82 82
64 North_Macedonia 27458 A 82 82
65 North_Macedonia 27459 G 82 82
66 North_Macedonia 27460 T 82 82
67 North_Macedonia 27461 G 82 82
68 North_Macedonia 27462 T 82 82
69 North_Macedonia 27463 G T 82 81 Val24Phe
70 North_Macedonia 27464 T 82 82
71 North_Macedonia 27465 T 82 82
72 North_Macedonia 27466 A 82 82
73 North_Macedonia 27467 G 82 82
74 North_Macedonia 27468 A 82 82
75 North_Macedonia 27469 G 82 82
76 North_Macedonia 27470 G 82 82
77 North_Macedonia 27471 T 82 82
78 North_Macedonia 27472 A 82 82
79 North_Macedonia 27473 C 82 82
80 North_Macedonia 27474 A 82 82
81 North_Macedonia 27475 A 82 82
82 North_Macedonia 27476 C 82 82
83 North_Macedonia 27477 A 82 82
84 North_Macedonia 27478 G 82 82
85 North_Macedonia 27479 T 82 82
86 North_Macedonia 27480 A 82 82
87 North_Macedonia 27481 C 82 82
88 North_Macedonia 27482 T 82 82
89 North_Macedonia 27483 T 82 82
90 North_Macedonia 27484 T 82 82
91 North_Macedonia 27485 T 82 82
92 North_Macedonia 27486 A 82 82
93 North_Macedonia 27487 A 82 82
94 North_Macedonia 27488 A 82 82
95 North_Macedonia 27489 A 82 82
96 North_Macedonia 27490 G 82 82
97 North_Macedonia 27491 A 82 82
98 North_Macedonia 27492 A 82 82
99 North_Macedonia 27493 C 82 82
100 North_Macedonia 27494 C 82 82
101 North_Macedonia 27495 T 82 82
102 North_Macedonia 27496 T 82 82
103 North_Macedonia 27497 G 82 82
104 North_Macedonia 27498 C 82 82
105 North_Macedonia 27499 T 82 82
106 North_Macedonia 27500 C 82 82
107 North_Macedonia 27501 T 82 82
108 North_Macedonia 27502 T 82 82
109 North_Macedonia 27503 C 82 82
110 North_Macedonia 27504 T 82 82
111 North_Macedonia 27505 G 82 82
112 North_Macedonia 27506 G 82 82
113 North_Macedonia 27507 A 82 82
114 North_Macedonia 27508 A 82 82
115 North_Macedonia 27509 C 82 82
116 North_Macedonia 27510 A 82 82
117 North_Macedonia 27511 T 82 82
118 North_Macedonia 27512 A 82 82
119 North_Macedonia 27513 C 82 82
120 North_Macedonia 27514 G 82 82
121 North_Macedonia 27515 A 82 82
122 North_Macedonia 27516 G 82 82
123 North_Macedonia 27517 G 82 82
124 North_Macedonia 27518 G 82 82
125 North_Macedonia 27519 C 82 82
126 North_Macedonia 27520 A 82 82
127 North_Macedonia 27521 A 82 82
128 North_Macedonia 27522 T 82 82
129 North_Macedonia 27523 T 82 82
130 North_Macedonia 27524 C 82 82
131 North_Macedonia 27525 A 82 82
132 North_Macedonia 27526 C 82 82
133 North_Macedonia 27527 C 82 82
134 North_Macedonia 27528 A 82 82
135 North_Macedonia 27529 T 82 82
136 North_Macedonia 27530 T 82 82
137 North_Macedonia 27531 T 82 82
138 North_Macedonia 27532 C 82 82
139 North_Macedonia 27533 A 82 82
140 North_Macedonia 27534 T 82 82
141 North_Macedonia 27535 C 82 82
142 North_Macedonia 27536 C 82 82
143 North_Macedonia 27537 T 82 82
144 North_Macedonia 27538 C 82 82
145 North_Macedonia 27539 T 82 82
146 North_Macedonia 27540 A 82 82
147 North_Macedonia 27541 G 82 82
148 North_Macedonia 27542 C 82 82
149 North_Macedonia 27543 T 82 82
150 North_Macedonia 27544 G 82 82
151 North_Macedonia 27545 A 82 82
152 North_Macedonia 27546 T 82 82
153 North_Macedonia 27547 A 82 82
154 North_Macedonia 27548 A 82 82
155 North_Macedonia 27549 C 82 82
156 North_Macedonia 27550 A 82 82
157 North_Macedonia 27551 A 82 82
158 North_Macedonia 27552 A 82 82
159 North_Macedonia 27553 T 82 82
160 North_Macedonia 27554 T 82 82
161 North_Macedonia 27555 T 82 82
162 North_Macedonia 27556 G 82 82
163 North_Macedonia 27557 C 82 82
164 North_Macedonia 27558 A 82 82
165 North_Macedonia 27559 C 82 82
166 North_Macedonia 27560 T 82 82
167 North_Macedonia 27561 G 82 82
168 North_Macedonia 27562 A 82 82
169 North_Macedonia 27563 C 82 82
170 North_Macedonia 27564 T 82 82
171 North_Macedonia 27565 T 82 82
172 North_Macedonia 27566 G 82 82
173 North_Macedonia 27567 C 82 82
174 North_Macedonia 27568 T 82 82
175 North_Macedonia 27569 T 82 82
176 North_Macedonia 27570 T 82 82
177 North_Macedonia 27571 A 82 82
178 North_Macedonia 27572 G 82 82
179 North_Macedonia 27573 C 82 82
180 North_Macedonia 27574 A 82 82
181 North_Macedonia 27575 C 82 82
182 North_Macedonia 27576 T 82 82
183 North_Macedonia 27577 C 82 82
184 North_Macedonia 27578 A 82 82
185 North_Macedonia 27579 A 82 82
186 North_Macedonia 27580 T 82 82
187 North_Macedonia 27581 T 82 82
188 North_Macedonia 27582 T A 82 80 Phe63Leu
189 North_Macedonia 27583 G 82 82
190 North_Macedonia 27584 C 82 82
191 North_Macedonia 27585 T 82 82
192 North_Macedonia 27586 T 82 82
193 North_Macedonia 27587 T 82 82
194 North_Macedonia 27588 T 82 82
195 North_Macedonia 27589 G 82 82
196 North_Macedonia 27590 C 82 82
197 North_Macedonia 27591 T G 82 78 Ala66Ala
198 North_Macedonia 27592 T 82 82
199 North_Macedonia 27593 G 82 82
200 North_Macedonia 27594 T 82 82
201 North_Macedonia 27595 C 82 82
202 North_Macedonia 27596 C 82 82
203 North_Macedonia 27597 T 82 82
204 North_Macedonia 27598 G A 82 81 Asp69Asn
205 North_Macedonia 27599 A 82 82
206 North_Macedonia 27600 C 82 82
207 North_Macedonia 27601 G 82 82
208 North_Macedonia 27602 G 82 82
209 North_Macedonia 27603 C 82 82
210 North_Macedonia 27604 G 82 82
211 North_Macedonia 27605 T 82 82
212 North_Macedonia 27606 A 82 82
213 North_Macedonia 27607 A 82 82
214 North_Macedonia 27608 A 82 82
215 North_Macedonia 27609 A 82 82
216 North_Macedonia 27610 C 82 82
217 North_Macedonia 27611 A 82 82
218 North_Macedonia 27612 C 82 82
219 North_Macedonia 27613 G 82 82
220 North_Macedonia 27614 T 82 82
221 North_Macedonia 27615 C 82 82
222 North_Macedonia 27616 T 82 82
223 North_Macedonia 27617 A 82 82
224 North_Macedonia 27618 T 82 82
225 North_Macedonia 27619 C 82 82
226 North_Macedonia 27620 A 82 82
227 North_Macedonia 27621 G 82 82
228 North_Macedonia 27622 T 82 82
229 North_Macedonia 27623 T 82 82
230 North_Macedonia 27624 A 82 82
231 North_Macedonia 27625 C 82 82
232 North_Macedonia 27626 G 82 82
233 North_Macedonia 27627 T 82 82
234 North_Macedonia 27628 G 82 82
235 North_Macedonia 27629 C 82 82
236 North_Macedonia 27630 C 82 82
237 North_Macedonia 27631 A 82 82
238 North_Macedonia 27632 G 82 82
239 North_Macedonia 27633 A 82 82
240 North_Macedonia 27634 T 82 82
241 North_Macedonia 27635 C 82 82
242 North_Macedonia 27636 A 82 82
243 North_Macedonia 27637 G 82 82
244 North_Macedonia 27638 T 82 82
245 North_Macedonia 27639 T 82 82
246 North_Macedonia 27640 T 82 82
247 North_Macedonia 27641 C 82 82
248 North_Macedonia 27642 A 82 82
249 North_Macedonia 27643 C 82 82
250 North_Macedonia 27644 C 82 82
251 North_Macedonia 27645 T 82 82
252 North_Macedonia 27646 A 82 82
253 North_Macedonia 27647 A 82 82
254 North_Macedonia 27648 A 82 82
255 North_Macedonia 27649 C 82 82
256 North_Macedonia 27650 T 82 82
257 North_Macedonia 27651 G 82 82
258 North_Macedonia 27652 T 82 82
259 North_Macedonia 27653 T 82 82
260 North_Macedonia 27654 C 82 82
261 North_Macedonia 27655 A 82 82
262 North_Macedonia 27656 T 82 82
263 North_Macedonia 27657 C 82 82
264 North_Macedonia 27658 A 82 82
265 North_Macedonia 27659 G 82 82
266 North_Macedonia 27660 A 82 82
267 North_Macedonia 27661 C 82 82
268 North_Macedonia 27662 A 82 82
269 North_Macedonia 27663 A 82 82
270 North_Macedonia 27664 G 82 82
271 North_Macedonia 27665 A 82 82
272 North_Macedonia 27666 G 82 82
273 North_Macedonia 27667 G 82 82
274 North_Macedonia 27668 A 82 82
275 North_Macedonia 27669 A 82 82
276 North_Macedonia 27670 G 82 82
277 North_Macedonia 27671 T 82 82
278 North_Macedonia 27672 T 82 82
279 North_Macedonia 27673 C 82 82
280 North_Macedonia 27674 A 82 82
281 North_Macedonia 27675 A 82 82
282 North_Macedonia 27676 G 82 82
283 North_Macedonia 27677 A 82 82
284 North_Macedonia 27678 A 82 82
285 North_Macedonia 27679 C 82 82
286 North_Macedonia 27680 T 82 82
287 North_Macedonia 27681 T 82 82
288 North_Macedonia 27682 T 82 82
289 North_Macedonia 27683 A 82 82
290 North_Macedonia 27684 C 82 82
291 North_Macedonia 27685 T 82 82
292 North_Macedonia 27686 C 82 82
293 North_Macedonia 27687 T 82 82
294 North_Macedonia 27688 C 82 82
295 North_Macedonia 27689 C 82 82
296 North_Macedonia 27690 A 82 82
297 North_Macedonia 27691 A 82 82
298 North_Macedonia 27692 T 82 82
299 North_Macedonia 27693 T 82 82
300 North_Macedonia 27694 T 82 82
301 North_Macedonia 27695 T 82 82
302 North_Macedonia 27696 T 82 82
303 North_Macedonia 27697 C 82 82
304 North_Macedonia 27698 T 82 82
305 North_Macedonia 27699 T 82 82
306 North_Macedonia 27700 A 82 82
307 North_Macedonia 27701 T 82 82
308 North_Macedonia 27702 T 82 82
309 North_Macedonia 27703 G 82 82
310 North_Macedonia 27704 T 82 82
311 North_Macedonia 27705 T 82 82
312 North_Macedonia 27706 G 82 82
313 North_Macedonia 27707 C 82 82
314 North_Macedonia 27708 G 82 82
315 North_Macedonia 27709 G 82 82
316 North_Macedonia 27710 C 82 82
317 North_Macedonia 27711 A 82 82
318 North_Macedonia 27712 A 82 82
319 North_Macedonia 27713 T 82 82
320 North_Macedonia 27714 A 82 82
321 North_Macedonia 27715 G 82 82
322 North_Macedonia 27716 T 82 82
323 North_Macedonia 27717 G 82 82
324 North_Macedonia 27718 T 82 82
325 North_Macedonia 27719 T 82 82
326 North_Macedonia 27720 T 82 82
327 North_Macedonia 27721 A 82 82
328 North_Macedonia 27722 T 82 82
329 North_Macedonia 27723 A 82 82
330 North_Macedonia 27724 A 82 82
331 North_Macedonia 27725 C 82 82
332 North_Macedonia 27726 A 82 82
333 North_Macedonia 27727 C 82 82
334 North_Macedonia 27728 T 82 82
335 North_Macedonia 27729 T 82 82
336 North_Macedonia 27730 T 82 82
337 North_Macedonia 27731 G 82 82
338 North_Macedonia 27732 C 82 82
339 North_Macedonia 27733 T 82 82
340 North_Macedonia 27734 T 82 82
341 North_Macedonia 27735 C 82 82
342 North_Macedonia 27736 A 82 82
343 North_Macedonia 27737 C 82 82
344 North_Macedonia 27738 A 82 82
345 North_Macedonia 27739 C 82 82
346 North_Macedonia 27740 T 82 82
347 North_Macedonia 27741 C 82 82
348 North_Macedonia 27742 A 82 82
349 North_Macedonia 27743 A 82 82
350 North_Macedonia 27744 A 82 82
351 North_Macedonia 27745 A 82 82
352 North_Macedonia 27746 G 82 82
353 North_Macedonia 27747 A 82 82
354 North_Macedonia 27748 A 82 82
355 North_Macedonia 27749 A 82 82
356 North_Macedonia 27750 G 82 82
357 North_Macedonia 27751 A 82 82
358 North_Macedonia 27752 C 82 82
359 North_Macedonia 27753 A 82 82
360 North_Macedonia 27754 G 82 82
361 North_Macedonia 27755 A 82 82
362 North_Macedonia 27756 A 82 82
363 North_Macedonia 27757 T 82 82
364 North_Macedonia 27758 G 82 82
365 North_Macedonia 27759 A 82 82