National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A C D E F G H I K L M N P Q R S T V Y
*     3                                      
-     370                                      
?                                            
A     27                                      
C     18                                      
D     6                                      
E     24                                      
F     30                                      
G     12                                      
H     9                                      
I     25                                      
K     21                                      
L     45                                      
M     6                                      
N     6                                      
P     18                                      
Q     15                                      
R     15                                      
S     21                                      
T     30                                      
V     24                                      
Y     15                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Kazakhstan 27394 A 53 53
1 Kazakhstan 27395 T 53 53
2 Kazakhstan 27396 G 53 53
3 Kazakhstan 27397 A 53 53
4 Kazakhstan 27398 A 53 53
5 Kazakhstan 27399 A 53 53
6 Kazakhstan 27400 A 53 53
7 Kazakhstan 27401 T 53 53
8 Kazakhstan 27402 T 53 53
9 Kazakhstan 27403 A 53 53
10 Kazakhstan 27404 T 53 53
11 Kazakhstan 27405 T 53 53
12 Kazakhstan 27406 C 53 53
13 Kazakhstan 27407 T 53 53
14 Kazakhstan 27408 T 53 53
15 Kazakhstan 27409 T 53 53
16 Kazakhstan 27410 T 53 53
17 Kazakhstan 27411 C 53 53
18 Kazakhstan 27412 T 53 53
19 Kazakhstan 27413 T 53 53
20 Kazakhstan 27414 G 53 53
21 Kazakhstan 27415 G 53 53
22 Kazakhstan 27416 C 53 53
23 Kazakhstan 27417 A 53 53
24 Kazakhstan 27418 C 53 53
25 Kazakhstan 27419 T 53 53
26 Kazakhstan 27420 G 53 53
27 Kazakhstan 27421 A 53 53
28 Kazakhstan 27422 T 53 53
29 Kazakhstan 27423 A 53 53
30 Kazakhstan 27424 A 53 53
31 Kazakhstan 27425 C 53 53
32 Kazakhstan 27426 A 53 53
33 Kazakhstan 27427 C 53 53
34 Kazakhstan 27428 T 53 53
35 Kazakhstan 27429 C 53 53
36 Kazakhstan 27430 G 53 53
37 Kazakhstan 27431 C 53 53
38 Kazakhstan 27432 T 53 53
39 Kazakhstan 27433 A 53 53
40 Kazakhstan 27434 C 53 53
41 Kazakhstan 27435 T 53 53
42 Kazakhstan 27436 T 53 53
43 Kazakhstan 27437 G 53 53
44 Kazakhstan 27438 T 53 53
45 Kazakhstan 27439 G 53 53
46 Kazakhstan 27440 A 53 53
47 Kazakhstan 27441 G 53 53
48 Kazakhstan 27442 C 53 53
49 Kazakhstan 27443 T 53 53
50 Kazakhstan 27444 T 53 53
51 Kazakhstan 27445 T 53 53
52 Kazakhstan 27446 A 53 53
53 Kazakhstan 27447 T 53 53
54 Kazakhstan 27448 C 53 53
55 Kazakhstan 27449 A 53 53
56 Kazakhstan 27450 C 53 53
57 Kazakhstan 27451 T 53 53
58 Kazakhstan 27452 A 53 53
59 Kazakhstan 27453 C 53 53
60 Kazakhstan 27454 C 53 53
61 Kazakhstan 27455 A 53 53
62 Kazakhstan 27456 A 53 53
63 Kazakhstan 27457 G 53 53
64 Kazakhstan 27458 A 53 53
65 Kazakhstan 27459 G 53 53
66 Kazakhstan 27460 T 53 53
67 Kazakhstan 27461 G 53 53
68 Kazakhstan 27462 T 53 53
69 Kazakhstan 27463 G 53 53
70 Kazakhstan 27464 T 53 53
71 Kazakhstan 27465 T 53 53
72 Kazakhstan 27466 A 53 53
73 Kazakhstan 27467 G 53 53
74 Kazakhstan 27468 A 53 53
75 Kazakhstan 27469 G 53 53
76 Kazakhstan 27470 G 53 53
77 Kazakhstan 27471 T 53 53
78 Kazakhstan 27472 A 53 53
79 Kazakhstan 27473 C 53 53
80 Kazakhstan 27474 A 53 53
81 Kazakhstan 27475 A 53 53
82 Kazakhstan 27476 C 53 53
83 Kazakhstan 27477 A 53 53
84 Kazakhstan 27478 G 53 53
85 Kazakhstan 27479 T 53 53
86 Kazakhstan 27480 A 53 53
87 Kazakhstan 27481 C 53 53
88 Kazakhstan 27482 T 53 53
89 Kazakhstan 27483 T 53 53
90 Kazakhstan 27484 T 53 53
91 Kazakhstan 27485 T 53 53
92 Kazakhstan 27486 A 53 53
93 Kazakhstan 27487 A 53 53
94 Kazakhstan 27488 A 53 53
95 Kazakhstan 27489 A 53 53
96 Kazakhstan 27490 G 53 53
97 Kazakhstan 27491 A 53 53
98 Kazakhstan 27492 A 53 53
99 Kazakhstan 27493 C 53 53
100 Kazakhstan 27494 C 53 53
101 Kazakhstan 27495 T 53 53
102 Kazakhstan 27496 T 53 53
103 Kazakhstan 27497 G 53 53
104 Kazakhstan 27498 C 53 53
105 Kazakhstan 27499 T 53 53
106 Kazakhstan 27500 C 53 53
107 Kazakhstan 27501 T 53 53
108 Kazakhstan 27502 T 53 53
109 Kazakhstan 27503 C 53 53
110 Kazakhstan 27504 T 53 53
111 Kazakhstan 27505 G 53 53
112 Kazakhstan 27506 G 53 53
113 Kazakhstan 27507 A 53 53
114 Kazakhstan 27508 A 53 53
115 Kazakhstan 27509 C 53 53
116 Kazakhstan 27510 A 53 53
117 Kazakhstan 27511 T 53 53
118 Kazakhstan 27512 A 53 53
119 Kazakhstan 27513 C 53 53
120 Kazakhstan 27514 G 53 53
121 Kazakhstan 27515 A 53 53
122 Kazakhstan 27516 G 53 53
123 Kazakhstan 27517 G 53 53
124 Kazakhstan 27518 G 53 53
125 Kazakhstan 27519 C 53 53
126 Kazakhstan 27520 A 53 53
127 Kazakhstan 27521 A 53 53
128 Kazakhstan 27522 T 53 53
129 Kazakhstan 27523 T 53 53
130 Kazakhstan 27524 C 53 53
131 Kazakhstan 27525 A 53 53
132 Kazakhstan 27526 C 53 53
133 Kazakhstan 27527 C 53 53
134 Kazakhstan 27528 A 53 53
135 Kazakhstan 27529 T 53 53
136 Kazakhstan 27530 T 53 53
137 Kazakhstan 27531 T 53 53
138 Kazakhstan 27532 C 53 53
139 Kazakhstan 27533 A 53 53
140 Kazakhstan 27534 T 53 53
141 Kazakhstan 27535 C 53 53
142 Kazakhstan 27536 C 53 53
143 Kazakhstan 27537 T 53 53
144 Kazakhstan 27538 C 53 53
145 Kazakhstan 27539 T 53 53
146 Kazakhstan 27540 A 53 53
147 Kazakhstan 27541 G 53 53
148 Kazakhstan 27542 C 53 53
149 Kazakhstan 27543 T 53 53
150 Kazakhstan 27544 G 53 53
151 Kazakhstan 27545 A 53 53
152 Kazakhstan 27546 T 53 53
153 Kazakhstan 27547 A 53 53
154 Kazakhstan 27548 A 53 53
155 Kazakhstan 27549 C 53 53
156 Kazakhstan 27550 A 53 53
157 Kazakhstan 27551 A 53 53
158 Kazakhstan 27552 A 53 53
159 Kazakhstan 27553 T 53 53
160 Kazakhstan 27554 T 53 53
161 Kazakhstan 27555 T 53 53
162 Kazakhstan 27556 G 53 53
163 Kazakhstan 27557 C 53 53
164 Kazakhstan 27558 A 53 53
165 Kazakhstan 27559 C 53 53
166 Kazakhstan 27560 T 53 53
167 Kazakhstan 27561 G 53 53
168 Kazakhstan 27562 A 53 53
169 Kazakhstan 27563 C 53 53
170 Kazakhstan 27564 T 53 53
171 Kazakhstan 27565 T 53 53
172 Kazakhstan 27566 G 53 53
173 Kazakhstan 27567 C 53 53
174 Kazakhstan 27568 T 53 53
175 Kazakhstan 27569 T 53 53
176 Kazakhstan 27570 T 53 53
177 Kazakhstan 27571 A 53 53
178 Kazakhstan 27572 G 53 53
179 Kazakhstan 27573 C 53 53
180 Kazakhstan 27574 A 53 53
181 Kazakhstan 27575 C 53 53
182 Kazakhstan 27576 T 53 53
183 Kazakhstan 27577 C 53 53
184 Kazakhstan 27578 A 53 53
185 Kazakhstan 27579 A 53 53
186 Kazakhstan 27580 T 53 53
187 Kazakhstan 27581 T 53 53
188 Kazakhstan 27582 T 53 53
189 Kazakhstan 27583 G 53 53
190 Kazakhstan 27584 C 53 53
191 Kazakhstan 27585 T 53 53
192 Kazakhstan 27586 T 53 53
193 Kazakhstan 27587 T 53 53
194 Kazakhstan 27588 T 53 53
195 Kazakhstan 27589 G 53 53
196 Kazakhstan 27590 C 53 53
197 Kazakhstan 27591 T 53 53
198 Kazakhstan 27592 T 53 53
199 Kazakhstan 27593 G 53 53
200 Kazakhstan 27594 T 53 53
201 Kazakhstan 27595 C 53 53
202 Kazakhstan 27596 C 53 53
203 Kazakhstan 27597 T 53 53
204 Kazakhstan 27598 G 53 53
205 Kazakhstan 27599 A 53 53
206 Kazakhstan 27600 C 53 53
207 Kazakhstan 27601 G 53 53
208 Kazakhstan 27602 G 53 53
209 Kazakhstan 27603 C 53 53
210 Kazakhstan 27604 G 53 53
211 Kazakhstan 27605 T 53 53
212 Kazakhstan 27606 A 53 53
213 Kazakhstan 27607 A 53 53
214 Kazakhstan 27608 A 53 53
215 Kazakhstan 27609 A 53 53
216 Kazakhstan 27610 C 53 53
217 Kazakhstan 27611 A 53 53
218 Kazakhstan 27612 C 53 53
219 Kazakhstan 27613 G 53 53
220 Kazakhstan 27614 T 53 53
221 Kazakhstan 27615 C 53 53
222 Kazakhstan 27616 T 53 53
223 Kazakhstan 27617 A 53 53
224 Kazakhstan 27618 T 53 53
225 Kazakhstan 27619 C 53 53
226 Kazakhstan 27620 A 53 53
227 Kazakhstan 27621 G 53 53
228 Kazakhstan 27622 T 53 53
229 Kazakhstan 27623 T 53 53
230 Kazakhstan 27624 A 53 53
231 Kazakhstan 27625 C 53 53
232 Kazakhstan 27626 G 53 53
233 Kazakhstan 27627 T 53 53
234 Kazakhstan 27628 G 53 53
235 Kazakhstan 27629 C 53 53
236 Kazakhstan 27630 C 53 53
237 Kazakhstan 27631 A 53 53
238 Kazakhstan 27632 G 53 53
239 Kazakhstan 27633 A 53 53
240 Kazakhstan 27634 T 53 53
241 Kazakhstan 27635 C 53 53
242 Kazakhstan 27636 A 53 53
243 Kazakhstan 27637 G 53 53
244 Kazakhstan 27638 T 53 53
245 Kazakhstan 27639 T 53 53
246 Kazakhstan 27640 T 53 53
247 Kazakhstan 27641 C 53 53
248 Kazakhstan 27642 A 53 53
249 Kazakhstan 27643 C 53 53
250 Kazakhstan 27644 C 53 53
251 Kazakhstan 27645 T 53 53
252 Kazakhstan 27646 A 53 53
253 Kazakhstan 27647 A 53 53
254 Kazakhstan 27648 A 53 53
255 Kazakhstan 27649 C 53 53
256 Kazakhstan 27650 T 53 53
257 Kazakhstan 27651 G 53 53
258 Kazakhstan 27652 T 53 53
259 Kazakhstan 27653 T 53 53
260 Kazakhstan 27654 C 53 53
261 Kazakhstan 27655 A 53 53
262 Kazakhstan 27656 T 53 53
263 Kazakhstan 27657 C 53 53
264 Kazakhstan 27658 A 53 53
265 Kazakhstan 27659 G 53 53
266 Kazakhstan 27660 A 53 53
267 Kazakhstan 27661 C 53 53
268 Kazakhstan 27662 A 53 53
269 Kazakhstan 27663 A 53 53
270 Kazakhstan 27664 G 53 53
271 Kazakhstan 27665 A 53 53
272 Kazakhstan 27666 G 53 53
273 Kazakhstan 27667 G 53 53
274 Kazakhstan 27668 A 53 53
275 Kazakhstan 27669 A 53 53
276 Kazakhstan 27670 G 53 53
277 Kazakhstan 27671 T 53 53
278 Kazakhstan 27672 T 53 53
279 Kazakhstan 27673 C 53 53
280 Kazakhstan 27674 A 53 53
281 Kazakhstan 27675 A 53 53
282 Kazakhstan 27676 G 53 53
283 Kazakhstan 27677 A 53 53
284 Kazakhstan 27678 A 53 53
285 Kazakhstan 27679 C 53 53
286 Kazakhstan 27680 T 53 53
287 Kazakhstan 27681 T 53 53
288 Kazakhstan 27682 T 53 53
289 Kazakhstan 27683 A 53 53
290 Kazakhstan 27684 C 53 53
291 Kazakhstan 27685 T 53 53
292 Kazakhstan 27686 C 53 53
293 Kazakhstan 27687 T 53 53
294 Kazakhstan 27688 C 53 53
295 Kazakhstan 27689 C 53 53
296 Kazakhstan 27690 A 53 53
297 Kazakhstan 27691 A 53 53
298 Kazakhstan 27692 T 53 53
299 Kazakhstan 27693 T 53 53
300 Kazakhstan 27694 T 53 53
301 Kazakhstan 27695 T 53 53
302 Kazakhstan 27696 T 53 53
303 Kazakhstan 27697 C 53 53
304 Kazakhstan 27698 T 53 53
305 Kazakhstan 27699 T 53 53
306 Kazakhstan 27700 A 53 53
307 Kazakhstan 27701 T 53 53
308 Kazakhstan 27702 T 53 53
309 Kazakhstan 27703 G 53 53
310 Kazakhstan 27704 T 53 53
311 Kazakhstan 27705 T 53 53
312 Kazakhstan 27706 G 53 53
313 Kazakhstan 27707 C 53 53
314 Kazakhstan 27708 G 53 53
315 Kazakhstan 27709 G 53 53
316 Kazakhstan 27710 C 53 53
317 Kazakhstan 27711 A 53 53
318 Kazakhstan 27712 A 53 53
319 Kazakhstan 27713 T 53 53
320 Kazakhstan 27714 A 53 53
321 Kazakhstan 27715 G 53 53
322 Kazakhstan 27716 T 53 53
323 Kazakhstan 27717 G 53 53
324 Kazakhstan 27718 T 53 53
325 Kazakhstan 27719 T 53 53
326 Kazakhstan 27720 T 53 53
327 Kazakhstan 27721 A 53 53
328 Kazakhstan 27722 T 53 53
329 Kazakhstan 27723 A 53 53
330 Kazakhstan 27724 A 53 53
331 Kazakhstan 27725 C 53 53
332 Kazakhstan 27726 A 53 53
333 Kazakhstan 27727 C 53 53
334 Kazakhstan 27728 T 53 53
335 Kazakhstan 27729 T 53 53
336 Kazakhstan 27730 T 53 53
337 Kazakhstan 27731 G 53 53
338 Kazakhstan 27732 C 53 53
339 Kazakhstan 27733 T 53 53
340 Kazakhstan 27734 T 53 53
341 Kazakhstan 27735 C 53 53
342 Kazakhstan 27736 A 53 53
343 Kazakhstan 27737 C 53 53
344 Kazakhstan 27738 A 53 53
345 Kazakhstan 27739 C 53 53
346 Kazakhstan 27740 T 53 53
347 Kazakhstan 27741 C 53 53
348 Kazakhstan 27742 A 53 53
349 Kazakhstan 27743 A 53 53
350 Kazakhstan 27744 A 53 53
351 Kazakhstan 27745 A 53 53
352 Kazakhstan 27746 G 53 53
353 Kazakhstan 27747 A 53 53
354 Kazakhstan 27748 A 53 53
355 Kazakhstan 27749 A 53 53
356 Kazakhstan 27750 G 53 53
357 Kazakhstan 27751 A 53 53
358 Kazakhstan 27752 C 53 53
359 Kazakhstan 27753 A 53 53
360 Kazakhstan 27754 G 53 53
361 Kazakhstan 27755 A 53 53
362 Kazakhstan 27756 A 53 53
363 Kazakhstan 27757 T 53 53
364 Kazakhstan 27758 G 53 53
365 Kazakhstan 27759 A 53 53