National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A C D E F G H I K L M N P Q R S T V Y
*     3                                      
-     370                                      
?                                            
A     27                                      
C     18                                      
D     6                                      
E 1   24                                      
F     30                   1                  
G     12                                      
H     9                                      
I     25                                      
K     21                                      
L     45                                      
M     6                                      
N     6                                      
P     18                               1      
Q     15                                      
R     15                                      
S     21                                      
T     30               1                      
V     24         1                            
Y     15                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Hungary 27394 A 278 278
1 Hungary 27395 T 278 278
2 Hungary 27396 G 278 278
3 Hungary 27397 A 278 278
4 Hungary 27398 A 278 278
5 Hungary 27399 A 278 278
6 Hungary 27400 A 278 278
7 Hungary 27401 T 278 278
8 Hungary 27402 T 278 278
9 Hungary 27403 A 278 278
10 Hungary 27404 T 278 278
11 Hungary 27405 T 278 278
12 Hungary 27406 C 278 278
13 Hungary 27407 T 278 278
14 Hungary 27408 T 278 278
15 Hungary 27409 T C 278 240 Phe6Leu
16 Hungary 27410 T 278 278
17 Hungary 27411 C 278 278
18 Hungary 27412 T 278 278
19 Hungary 27413 T 278 278
20 Hungary 27414 G 278 278
21 Hungary 27415 G 278 278
22 Hungary 27416 C 278 278
23 Hungary 27417 A 278 278
24 Hungary 27418 C 278 278
25 Hungary 27419 T 278 278
26 Hungary 27420 G 278 278
27 Hungary 27421 A 278 278
28 Hungary 27422 T 278 278
29 Hungary 27423 A 278 278
30 Hungary 27424 A 278 278
31 Hungary 27425 C 278 278
32 Hungary 27426 A 278 278
33 Hungary 27427 C 278 278
34 Hungary 27428 T 278 278
35 Hungary 27429 C 278 278
36 Hungary 27430 G 278 278
37 Hungary 27431 C 278 278
38 Hungary 27432 T 278 278
39 Hungary 27433 A 278 278
40 Hungary 27434 C 278 278
41 Hungary 27435 T 278 278
42 Hungary 27436 T 278 278
43 Hungary 27437 G 278 278
44 Hungary 27438 T 278 278
45 Hungary 27439 G 278 278
46 Hungary 27440 A 278 278
47 Hungary 27441 G 278 278
48 Hungary 27442 C 278 278
49 Hungary 27443 T 278 278
50 Hungary 27444 T 278 278
51 Hungary 27445 T 278 278
52 Hungary 27446 A 278 278
53 Hungary 27447 T 278 278
54 Hungary 27448 C 278 278
55 Hungary 27449 A 278 278
56 Hungary 27450 C 278 278
57 Hungary 27451 T 278 278
58 Hungary 27452 A 278 278
59 Hungary 27453 C 278 278
60 Hungary 27454 C 278 278
61 Hungary 27455 A 278 278
62 Hungary 27456 A 278 278
63 Hungary 27457 G 278 278
64 Hungary 27458 A 278 278
65 Hungary 27459 G 278 278
66 Hungary 27460 T 278 278
67 Hungary 27461 G 278 278
68 Hungary 27462 T 278 278
69 Hungary 27463 G 278 278
70 Hungary 27464 T 278 278
71 Hungary 27465 T 278 278
72 Hungary 27466 A 278 278
73 Hungary 27467 G 278 278
74 Hungary 27468 A 278 278
75 Hungary 27469 G 278 278
76 Hungary 27470 G 278 278
77 Hungary 27471 T 278 278
78 Hungary 27472 A 278 278
79 Hungary 27473 C 278 278
80 Hungary 27474 A 278 278
81 Hungary 27475 A 278 278
82 Hungary 27476 C 278 278
83 Hungary 27477 A 278 278
84 Hungary 27478 G 278 278
85 Hungary 27479 T 278 278
86 Hungary 27480 A 278 278
87 Hungary 27481 C 278 278
88 Hungary 27482 T 278 278
89 Hungary 27483 T 278 278
90 Hungary 27484 T 278 278
91 Hungary 27485 T 278 277
92 Hungary 27486 A 278 277
93 Hungary 27487 A 278 278
94 Hungary 27488 A 278 278
95 Hungary 27489 A 278 278
96 Hungary 27490 G 278 278
97 Hungary 27491 A 278 278
98 Hungary 27492 A 278 278
99 Hungary 27493 C 278 278
100 Hungary 27494 C 278 278
101 Hungary 27495 T 278 278
102 Hungary 27496 T 278 278
103 Hungary 27497 G 278 278
104 Hungary 27498 C 278 278
105 Hungary 27499 T 278 278
106 Hungary 27500 C 278 278
107 Hungary 27501 T 278 278
108 Hungary 27502 T 278 278
109 Hungary 27503 C 278 278
110 Hungary 27504 T 278 278
111 Hungary 27505 G 278 278
112 Hungary 27506 G 278 278
113 Hungary 27507 A 278 278
114 Hungary 27508 A 278 278
115 Hungary 27509 C 278 278
116 Hungary 27510 A 278 278
117 Hungary 27511 T 278 278
118 Hungary 27512 A 277 277
119 Hungary 27513 C 277 277
120 Hungary 27514 G 277 277
121 Hungary 27515 A 277 277
122 Hungary 27516 G 277 277
123 Hungary 27517 G 277 277
124 Hungary 27518 G 277 277
125 Hungary 27519 C 277 277
126 Hungary 27520 A 277 277
127 Hungary 27521 A 277 277
128 Hungary 27522 T 277 277
129 Hungary 27523 T 277 277
130 Hungary 27524 C 277 277
131 Hungary 27525 A 277 277
132 Hungary 27526 C 277 277
133 Hungary 27527 C 277 277
134 Hungary 27528 A 277 277
135 Hungary 27529 T 277 277
136 Hungary 27530 T 277 277
137 Hungary 27531 T 277 277
138 Hungary 27532 C 277 277
139 Hungary 27533 A 277 277
140 Hungary 27534 T 277 277
141 Hungary 27535 C 277 277
142 Hungary 27536 C 277 277
143 Hungary 27537 T 277 277
144 Hungary 27538 C 277 277
145 Hungary 27539 T 277 277
146 Hungary 27540 A 277 277
147 Hungary 27541 G 277 277
148 Hungary 27542 C 277 277
149 Hungary 27543 T 277 277
150 Hungary 27544 G 277 277
151 Hungary 27545 A 277 277
152 Hungary 27546 T 277 277
153 Hungary 27547 A 277 277
154 Hungary 27548 A 277 277
155 Hungary 27549 C 277 277
156 Hungary 27550 A 277 277
157 Hungary 27551 A 277 277
158 Hungary 27552 A 277 277
159 Hungary 27553 T 277 277
160 Hungary 27554 T 277 277
161 Hungary 27555 T 277 277
162 Hungary 27556 G 277 277
163 Hungary 27557 C 277 277
164 Hungary 27558 A 277 277
165 Hungary 27559 C 277 277
166 Hungary 27560 T 277 277
167 Hungary 27561 G 277 277
168 Hungary 27562 A 277 277
169 Hungary 27563 C 277 277
170 Hungary 27564 T 277 277
171 Hungary 27565 T 277 277
172 Hungary 27566 G 277 277
173 Hungary 27567 C 277 277
174 Hungary 27568 T 277 277
175 Hungary 27569 T 277 277
176 Hungary 27570 T 277 277
177 Hungary 27571 A 277 277
178 Hungary 27572 G 277 277
179 Hungary 27573 C 277 277
180 Hungary 27574 A 277 277
181 Hungary 27575 C 277 277
182 Hungary 27576 T 277 277
183 Hungary 27577 C 277 277
184 Hungary 27578 A 277 277
185 Hungary 27579 A 277 277
186 Hungary 27580 T 277 277
187 Hungary 27581 T 277 277
188 Hungary 27582 T 277 277
189 Hungary 27583 G 277 277
190 Hungary 27584 C 277 277
191 Hungary 27585 T 277 277
192 Hungary 27586 T 277 277
193 Hungary 27587 T 277 277
194 Hungary 27588 T 277 277
195 Hungary 27589 G 277 277
196 Hungary 27590 C 277 277
197 Hungary 27591 T 277 277
198 Hungary 27592 T 277 277
199 Hungary 27593 G 277 277
200 Hungary 27594 T 277 277
201 Hungary 27595 C 277 277
202 Hungary 27596 C 277 277
203 Hungary 27597 T 277 277
204 Hungary 27598 G 277 277
205 Hungary 27599 A 277 277
206 Hungary 27600 C 277 277
207 Hungary 27601 G 277 277
208 Hungary 27602 G 277 277
209 Hungary 27603 C 277 277
210 Hungary 27604 G 277 277
211 Hungary 27605 T 277 277
212 Hungary 27606 A 277 277
213 Hungary 27607 A 277 277
214 Hungary 27608 A 277 277
215 Hungary 27609 A 277 277
216 Hungary 27610 C 277 277
217 Hungary 27611 A 277 277
218 Hungary 27612 C 277 277
219 Hungary 27613 G 277 277
220 Hungary 27614 T 277 277
221 Hungary 27615 C 277 277
222 Hungary 27616 T 277 277
223 Hungary 27617 A 277 277
224 Hungary 27618 T 277 277
225 Hungary 27619 C 277 277
226 Hungary 27620 A 277 277
227 Hungary 27621 G 277 277
228 Hungary 27622 T 277 277
229 Hungary 27623 T 277 277
230 Hungary 27624 A 277 277
231 Hungary 27625 C 277 277
232 Hungary 27626 G 277 277
233 Hungary 27627 T 277 277
234 Hungary 27628 G 277 277
235 Hungary 27629 C 277 277
236 Hungary 27630 C 277 277
237 Hungary 27631 A 277 277
238 Hungary 27632 G 277 277
239 Hungary 27633 A 277 277
240 Hungary 27634 T 277 277
241 Hungary 27635 C 277 277
242 Hungary 27636 A 277 277
243 Hungary 27637 G 277 277
244 Hungary 27638 T 277 277
245 Hungary 27639 T 277 277
246 Hungary 27640 T 277 277
247 Hungary 27641 C 277 277
248 Hungary 27642 A 277 277
249 Hungary 27643 C T 277 276 Pro84Ser
250 Hungary 27644 C 277 277
251 Hungary 27645 T 277 277
252 Hungary 27646 A 277 277
253 Hungary 27647 A 277 277
254 Hungary 27648 A 277 277
255 Hungary 27649 C 277 277
256 Hungary 27650 T 277 277
257 Hungary 27651 G 277 277
258 Hungary 27652 T 277 277
259 Hungary 27653 T 277 277
260 Hungary 27654 C 277 277
261 Hungary 27655 A 277 277
262 Hungary 27656 T 277 277
263 Hungary 27657 C 277 277
264 Hungary 27658 A 277 277
265 Hungary 27659 G 277 277
266 Hungary 27660 A 277 277
267 Hungary 27661 C 277 277
268 Hungary 27662 A 277 277
269 Hungary 27663 A 277 277
270 Hungary 27664 G 277 277
271 Hungary 27665 A 277 277
272 Hungary 27666 G 277 277
273 Hungary 27667 G 277 277
274 Hungary 27668 A 277 277
275 Hungary 27669 A 277 277
276 Hungary 27670 G T 277 276 Val93Phe
277 Hungary 27671 T 277 277
278 Hungary 27672 T 277 277
279 Hungary 27673 C 277 277
280 Hungary 27674 A 277 277
281 Hungary 27675 A 277 277
282 Hungary 27676 G 277 277
283 Hungary 27677 A 277 277
284 Hungary 27678 A 277 277
285 Hungary 27679 C 277 277
286 Hungary 27680 T 277 277
287 Hungary 27681 T 277 277
288 Hungary 27682 T 277 277
289 Hungary 27683 A 277 277
290 Hungary 27684 C 277 277
291 Hungary 27685 T 277 277
292 Hungary 27686 C 277 277
293 Hungary 27687 T 277 277
294 Hungary 27688 C 277 277
295 Hungary 27689 C 277 277
296 Hungary 27690 A 277 277
297 Hungary 27691 A 277 277
298 Hungary 27692 T 277 277
299 Hungary 27693 T 277 277
300 Hungary 27694 T 277 277
301 Hungary 27695 T 277 277
302 Hungary 27696 T 277 277
303 Hungary 27697 C 277 277
304 Hungary 27698 T 277 277
305 Hungary 27699 T 277 277
306 Hungary 27700 A 277 277
307 Hungary 27701 T 277 277
308 Hungary 27702 T 277 277
309 Hungary 27703 G 277 277
310 Hungary 27704 T 277 277
311 Hungary 27705 T 277 277
312 Hungary 27706 G 277 277
313 Hungary 27707 C 277 277
314 Hungary 27708 G 277 277
315 Hungary 27709 G 277 277
316 Hungary 27710 C 277 277
317 Hungary 27711 A 277 277
318 Hungary 27712 A 277 277
319 Hungary 27713 T 277 277
320 Hungary 27714 A 277 277
321 Hungary 27715 G 277 277
322 Hungary 27716 T 277 277
323 Hungary 27717 G 277 277
324 Hungary 27718 T 277 277
325 Hungary 27719 T 277 277
326 Hungary 27720 T 277 277
327 Hungary 27721 A 277 277
328 Hungary 27722 T 277 277
329 Hungary 27723 A 277 277
330 Hungary 27724 A 277 277
331 Hungary 27725 C 277 277
332 Hungary 27726 A 277 277
333 Hungary 27727 C 277 277
334 Hungary 27728 T 277 277
335 Hungary 27729 T 277 277
336 Hungary 27730 T 277 277
337 Hungary 27731 G 277 277
338 Hungary 27732 C 277 277
339 Hungary 27733 T 277 277
340 Hungary 27734 T 277 277
341 Hungary 27735 C 277 277
342 Hungary 27736 A 277 277
343 Hungary 27737 C 277 277
344 Hungary 27738 A 277 277
345 Hungary 27739 C 277 277
346 Hungary 27740 T 277 277
347 Hungary 27741 C 277 277
348 Hungary 27742 A 277 277
349 Hungary 27743 A 277 277
350 Hungary 27744 A 277 277
351 Hungary 27745 A 277 277
352 Hungary 27746 G 277 277
353 Hungary 27747 A 277 277
354 Hungary 27748 A 277 277
355 Hungary 27749 A 277 277
356 Hungary 27750 G 277 277
357 Hungary 27751 A 277 277
358 Hungary 27752 C T 277 276 Thr120Ile
359 Hungary 27753 A 277 277
360 Hungary 27754 G T 277 273 Glu121*
361 Hungary 27755 A 277 277
362 Hungary 27756 A 277 277
363 Hungary 27757 T 277 277
364 Hungary 27758 G 277 277
365 Hungary 27759 A 277 277