National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
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Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A C D E F G H I K L M N P Q R S T V Y
*     3                                      
-     370                                      
?                                            
A     27                                   1  
C     18                                      
D     6                                      
E     24                                      
F     30                                      
G     12                                      
H     9                                      
I     25                                      
K     21                                      
L     45                                      
M     6                                      
N     6                                      
P     18                                      
Q     15                                      
R     15                                      
S     21                                      
T     30                                      
V     24                                      
Y     15                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Dominican_Republic 27394 A 8 8
1 Dominican_Republic 27395 T 8 8
2 Dominican_Republic 27396 G 8 8
3 Dominican_Republic 27397 A 8 8
4 Dominican_Republic 27398 A 8 8
5 Dominican_Republic 27399 A 8 8
6 Dominican_Republic 27400 A 8 8
7 Dominican_Republic 27401 T 8 8
8 Dominican_Republic 27402 T 8 8
9 Dominican_Republic 27403 A 8 8
10 Dominican_Republic 27404 T 8 8
11 Dominican_Republic 27405 T 8 8
12 Dominican_Republic 27406 C 8 8
13 Dominican_Republic 27407 T 8 8
14 Dominican_Republic 27408 T 8 8
15 Dominican_Republic 27409 T 8 8
16 Dominican_Republic 27410 T 8 8
17 Dominican_Republic 27411 C 8 8
18 Dominican_Republic 27412 T 8 8
19 Dominican_Republic 27413 T 8 8
20 Dominican_Republic 27414 G 8 8
21 Dominican_Republic 27415 G 8 8
22 Dominican_Republic 27416 C 8 8
23 Dominican_Republic 27417 A 8 8
24 Dominican_Republic 27418 C 8 8
25 Dominican_Republic 27419 T 8 8
26 Dominican_Republic 27420 G 8 8
27 Dominican_Republic 27421 A 8 8
28 Dominican_Republic 27422 T 8 8
29 Dominican_Republic 27423 A 8 8
30 Dominican_Republic 27424 A 8 8
31 Dominican_Republic 27425 C 8 8
32 Dominican_Republic 27426 A 8 8
33 Dominican_Republic 27427 C 8 8
34 Dominican_Republic 27428 T 8 8
35 Dominican_Republic 27429 C 8 8
36 Dominican_Republic 27430 G 8 8
37 Dominican_Republic 27431 C 8 8
38 Dominican_Republic 27432 T 8 8
39 Dominican_Republic 27433 A 8 8
40 Dominican_Republic 27434 C 8 8
41 Dominican_Republic 27435 T 8 8
42 Dominican_Republic 27436 T 8 8
43 Dominican_Republic 27437 G 8 8
44 Dominican_Republic 27438 T 8 8
45 Dominican_Republic 27439 G 8 8
46 Dominican_Republic 27440 A 8 8
47 Dominican_Republic 27441 G 8 8
48 Dominican_Republic 27442 C 8 8
49 Dominican_Republic 27443 T 8 8
50 Dominican_Republic 27444 T 8 8
51 Dominican_Republic 27445 T 8 8
52 Dominican_Republic 27446 A 8 8
53 Dominican_Republic 27447 T 8 8
54 Dominican_Republic 27448 C 8 8
55 Dominican_Republic 27449 A 8 8
56 Dominican_Republic 27450 C 8 8
57 Dominican_Republic 27451 T 8 8
58 Dominican_Republic 27452 A 8 8
59 Dominican_Republic 27453 C 8 8
60 Dominican_Republic 27454 C 8 8
61 Dominican_Republic 27455 A 8 8
62 Dominican_Republic 27456 A 8 8
63 Dominican_Republic 27457 G 8 8
64 Dominican_Republic 27458 A 8 8
65 Dominican_Republic 27459 G 8 8
66 Dominican_Republic 27460 T 8 8
67 Dominican_Republic 27461 G 8 8
68 Dominican_Republic 27462 T 8 8
69 Dominican_Republic 27463 G 8 8
70 Dominican_Republic 27464 T 8 8
71 Dominican_Republic 27465 T 8 8
72 Dominican_Republic 27466 A 8 8
73 Dominican_Republic 27467 G 8 8
74 Dominican_Republic 27468 A 8 8
75 Dominican_Republic 27469 G 8 8
76 Dominican_Republic 27470 G 8 8
77 Dominican_Republic 27471 T 8 8
78 Dominican_Republic 27472 A 8 8
79 Dominican_Republic 27473 C 8 8
80 Dominican_Republic 27474 A 8 8
81 Dominican_Republic 27475 A 8 8
82 Dominican_Republic 27476 C 8 8
83 Dominican_Republic 27477 A 8 8
84 Dominican_Republic 27478 G 8 8
85 Dominican_Republic 27479 T 8 8
86 Dominican_Republic 27480 A 8 8
87 Dominican_Republic 27481 C 8 8
88 Dominican_Republic 27482 T 8 8
89 Dominican_Republic 27483 T 8 8
90 Dominican_Republic 27484 T 8 8
91 Dominican_Republic 27485 T 8 8
92 Dominican_Republic 27486 A 8 8
93 Dominican_Republic 27487 A 8 8
94 Dominican_Republic 27488 A 8 8
95 Dominican_Republic 27489 A 8 8
96 Dominican_Republic 27490 G 8 8
97 Dominican_Republic 27491 A 8 8
98 Dominican_Republic 27492 A 8 8
99 Dominican_Republic 27493 C 8 8
100 Dominican_Republic 27494 C 8 8
101 Dominican_Republic 27495 T 8 8
102 Dominican_Republic 27496 T 8 8
103 Dominican_Republic 27497 G 8 8
104 Dominican_Republic 27498 C 8 8
105 Dominican_Republic 27499 T 8 8
106 Dominican_Republic 27500 C 8 8
107 Dominican_Republic 27501 T 8 8
108 Dominican_Republic 27502 T 8 8
109 Dominican_Republic 27503 C 8 8
110 Dominican_Republic 27504 T 8 8
111 Dominican_Republic 27505 G 8 8
112 Dominican_Republic 27506 G 8 8
113 Dominican_Republic 27507 A 8 8
114 Dominican_Republic 27508 A 8 8
115 Dominican_Republic 27509 C 8 8
116 Dominican_Republic 27510 A 8 8
117 Dominican_Republic 27511 T 8 8
118 Dominican_Republic 27512 A 8 8
119 Dominican_Republic 27513 C 8 8
120 Dominican_Republic 27514 G 8 8
121 Dominican_Republic 27515 A 8 8
122 Dominican_Republic 27516 G 8 8
123 Dominican_Republic 27517 G 8 8
124 Dominican_Republic 27518 G 8 8
125 Dominican_Republic 27519 C 8 8
126 Dominican_Republic 27520 A 8 8
127 Dominican_Republic 27521 A 8 8
128 Dominican_Republic 27522 T 8 8
129 Dominican_Republic 27523 T 8 8
130 Dominican_Republic 27524 C 8 8
131 Dominican_Republic 27525 A 8 8
132 Dominican_Republic 27526 C 8 8
133 Dominican_Republic 27527 C 8 8
134 Dominican_Republic 27528 A 8 8
135 Dominican_Republic 27529 T 8 8
136 Dominican_Republic 27530 T 8 8
137 Dominican_Republic 27531 T 8 8
138 Dominican_Republic 27532 C 8 8
139 Dominican_Republic 27533 A 8 8
140 Dominican_Republic 27534 T 8 8
141 Dominican_Republic 27535 C 8 8
142 Dominican_Republic 27536 C 8 8
143 Dominican_Republic 27537 T 8 8
144 Dominican_Republic 27538 C 8 8
145 Dominican_Republic 27539 T 8 8
146 Dominican_Republic 27540 A 8 8
147 Dominican_Republic 27541 G 8 8
148 Dominican_Republic 27542 C 8 8
149 Dominican_Republic 27543 T 8 8
150 Dominican_Republic 27544 G 8 8
151 Dominican_Republic 27545 A 8 8
152 Dominican_Republic 27546 T 8 8
153 Dominican_Republic 27547 A 8 8
154 Dominican_Republic 27548 A 8 8
155 Dominican_Republic 27549 C 8 8
156 Dominican_Republic 27550 A 8 8
157 Dominican_Republic 27551 A 8 8
158 Dominican_Republic 27552 A 8 8
159 Dominican_Republic 27553 T 8 8
160 Dominican_Republic 27554 T 8 8
161 Dominican_Republic 27555 T 8 8
162 Dominican_Republic 27556 G 8 8
163 Dominican_Republic 27557 C 8 8
164 Dominican_Republic 27558 A 8 8
165 Dominican_Republic 27559 C 8 8
166 Dominican_Republic 27560 T 8 8
167 Dominican_Republic 27561 G 8 8
168 Dominican_Republic 27562 A 8 8
169 Dominican_Republic 27563 C 8 8
170 Dominican_Republic 27564 T 8 8
171 Dominican_Republic 27565 T 8 8
172 Dominican_Republic 27566 G 8 8
173 Dominican_Republic 27567 C 8 8
174 Dominican_Republic 27568 T 8 8
175 Dominican_Republic 27569 T 8 8
176 Dominican_Republic 27570 T 8 8
177 Dominican_Republic 27571 A 8 8
178 Dominican_Republic 27572 G 8 8
179 Dominican_Republic 27573 C 8 8
180 Dominican_Republic 27574 A 8 8
181 Dominican_Republic 27575 C 8 8
182 Dominican_Republic 27576 T 8 8
183 Dominican_Republic 27577 C 8 8
184 Dominican_Republic 27578 A 8 8
185 Dominican_Republic 27579 A 8 8
186 Dominican_Republic 27580 T 8 8
187 Dominican_Republic 27581 T 8 8
188 Dominican_Republic 27582 T 8 8
189 Dominican_Republic 27583 G 8 8
190 Dominican_Republic 27584 C 8 8
191 Dominican_Republic 27585 T 8 8
192 Dominican_Republic 27586 T 8 8
193 Dominican_Republic 27587 T 8 8
194 Dominican_Republic 27588 T 8 8
195 Dominican_Republic 27589 G 8 8
196 Dominican_Republic 27590 C 8 8
197 Dominican_Republic 27591 T 8 8
198 Dominican_Republic 27592 T 8 8
199 Dominican_Republic 27593 G 8 8
200 Dominican_Republic 27594 T 8 8
201 Dominican_Republic 27595 C 8 8
202 Dominican_Republic 27596 C 8 8
203 Dominican_Republic 27597 T 8 8
204 Dominican_Republic 27598 G 8 8
205 Dominican_Republic 27599 A 8 8
206 Dominican_Republic 27600 C 8 8
207 Dominican_Republic 27601 G 8 8
208 Dominican_Republic 27602 G 8 8
209 Dominican_Republic 27603 C 8 8
210 Dominican_Republic 27604 G 8 8
211 Dominican_Republic 27605 T 8 8
212 Dominican_Republic 27606 A 8 8
213 Dominican_Republic 27607 A 8 8
214 Dominican_Republic 27608 A 8 8
215 Dominican_Republic 27609 A 8 8
216 Dominican_Republic 27610 C 8 8
217 Dominican_Republic 27611 A 8 8
218 Dominican_Republic 27612 C 8 8
219 Dominican_Republic 27613 G 8 8
220 Dominican_Republic 27614 T 8 8
221 Dominican_Republic 27615 C 8 8
222 Dominican_Republic 27616 T 8 8
223 Dominican_Republic 27617 A 8 8
224 Dominican_Republic 27618 T 8 8
225 Dominican_Republic 27619 C 8 8
226 Dominican_Republic 27620 A 8 8
227 Dominican_Republic 27621 G 8 8
228 Dominican_Republic 27622 T 8 8
229 Dominican_Republic 27623 T 8 8
230 Dominican_Republic 27624 A 8 8
231 Dominican_Republic 27625 C 8 8
232 Dominican_Republic 27626 G 8 8
233 Dominican_Republic 27627 T 8 8
234 Dominican_Republic 27628 G 8 8
235 Dominican_Republic 27629 C 8 8
236 Dominican_Republic 27630 C 8 8
237 Dominican_Republic 27631 A 8 8
238 Dominican_Republic 27632 G 8 8
239 Dominican_Republic 27633 A 8 8
240 Dominican_Republic 27634 T 8 8
241 Dominican_Republic 27635 C 8 8
242 Dominican_Republic 27636 A 8 8
243 Dominican_Republic 27637 G 8 8
244 Dominican_Republic 27638 T 8 8
245 Dominican_Republic 27639 T 8 8
246 Dominican_Republic 27640 T 8 8
247 Dominican_Republic 27641 C 8 8
248 Dominican_Republic 27642 A 8 8
249 Dominican_Republic 27643 C 8 8
250 Dominican_Republic 27644 C 8 8
251 Dominican_Republic 27645 T 8 8
252 Dominican_Republic 27646 A 8 8
253 Dominican_Republic 27647 A 8 8
254 Dominican_Republic 27648 A 8 8
255 Dominican_Republic 27649 C 8 8
256 Dominican_Republic 27650 T 8 8
257 Dominican_Republic 27651 G 8 8
258 Dominican_Republic 27652 T 8 8
259 Dominican_Republic 27653 T 8 8
260 Dominican_Republic 27654 C 8 8
261 Dominican_Republic 27655 A 8 8
262 Dominican_Republic 27656 T 8 8
263 Dominican_Republic 27657 C 8 8
264 Dominican_Republic 27658 A 8 8
265 Dominican_Republic 27659 G 8 8
266 Dominican_Republic 27660 A 8 8
267 Dominican_Republic 27661 C 8 8
268 Dominican_Republic 27662 A 8 8
269 Dominican_Republic 27663 A 8 8
270 Dominican_Republic 27664 G 8 8
271 Dominican_Republic 27665 A 8 8
272 Dominican_Republic 27666 G 8 8
273 Dominican_Republic 27667 G 8 8
274 Dominican_Republic 27668 A 8 8
275 Dominican_Republic 27669 A 8 8
276 Dominican_Republic 27670 G 8 8
277 Dominican_Republic 27671 T 8 8
278 Dominican_Republic 27672 T 8 8
279 Dominican_Republic 27673 C 8 8
280 Dominican_Republic 27674 A 8 8
281 Dominican_Republic 27675 A 8 8
282 Dominican_Republic 27676 G 8 8
283 Dominican_Republic 27677 A 8 8
284 Dominican_Republic 27678 A 8 8
285 Dominican_Republic 27679 C 8 8
286 Dominican_Republic 27680 T 8 8
287 Dominican_Republic 27681 T 8 8
288 Dominican_Republic 27682 T 8 8
289 Dominican_Republic 27683 A 8 8
290 Dominican_Republic 27684 C 8 8
291 Dominican_Republic 27685 T 8 8
292 Dominican_Republic 27686 C 8 8
293 Dominican_Republic 27687 T 8 8
294 Dominican_Republic 27688 C 8 8
295 Dominican_Republic 27689 C 8 8
296 Dominican_Republic 27690 A 8 8
297 Dominican_Republic 27691 A 8 7
298 Dominican_Republic 27692 T 8 7
299 Dominican_Republic 27693 T 8 7
300 Dominican_Republic 27694 T 8 7
301 Dominican_Republic 27695 T 8 7
302 Dominican_Republic 27696 T 8 7
303 Dominican_Republic 27697 C 8 7
304 Dominican_Republic 27698 T 8 7
305 Dominican_Republic 27699 T 8 7
306 Dominican_Republic 27700 A 8 7
307 Dominican_Republic 27701 T 8 7
308 Dominican_Republic 27702 T 8 8
309 Dominican_Republic 27703 G 8 8
310 Dominican_Republic 27704 T 8 8
311 Dominican_Republic 27705 T 8 8
312 Dominican_Republic 27706 G 8 8
313 Dominican_Republic 27707 C T 8 7 Ala105Val
314 Dominican_Republic 27708 G 8 8
315 Dominican_Republic 27709 G 8 8
316 Dominican_Republic 27710 C 8 8
317 Dominican_Republic 27711 A 8 8
318 Dominican_Republic 27712 A 8 8
319 Dominican_Republic 27713 T 8 8
320 Dominican_Republic 27714 A 8 8
321 Dominican_Republic 27715 G 8 8
322 Dominican_Republic 27716 T 8 8
323 Dominican_Republic 27717 G 8 8
324 Dominican_Republic 27718 T 8 8
325 Dominican_Republic 27719 T 8 8
326 Dominican_Republic 27720 T 8 8
327 Dominican_Republic 27721 A 8 8
328 Dominican_Republic 27722 T 8 8
329 Dominican_Republic 27723 A 8 8
330 Dominican_Republic 27724 A 8 8
331 Dominican_Republic 27725 C 8 8
332 Dominican_Republic 27726 A 8 8
333 Dominican_Republic 27727 C 8 8
334 Dominican_Republic 27728 T 8 8
335 Dominican_Republic 27729 T 8 8
336 Dominican_Republic 27730 T 8 8
337 Dominican_Republic 27731 G 8 8
338 Dominican_Republic 27732 C 8 8
339 Dominican_Republic 27733 T 8 8
340 Dominican_Republic 27734 T 8 8
341 Dominican_Republic 27735 C 8 8
342 Dominican_Republic 27736 A 8 8
343 Dominican_Republic 27737 C 8 8
344 Dominican_Republic 27738 A 8 8
345 Dominican_Republic 27739 C 8 8
346 Dominican_Republic 27740 T 8 8
347 Dominican_Republic 27741 C 8 8
348 Dominican_Republic 27742 A 8 8
349 Dominican_Republic 27743 A 8 8
350 Dominican_Republic 27744 A 8 8
351 Dominican_Republic 27745 A 8 8
352 Dominican_Republic 27746 G 8 8
353 Dominican_Republic 27747 A 8 8
354 Dominican_Republic 27748 A 8 8
355 Dominican_Republic 27749 A 8 8
356 Dominican_Republic 27750 G 8 8
357 Dominican_Republic 27751 A 8 8
358 Dominican_Republic 27752 C 8 8
359 Dominican_Republic 27753 A 8 8
360 Dominican_Republic 27754 G 8 8
361 Dominican_Republic 27755 A 8 8
362 Dominican_Republic 27756 A 8 8
363 Dominican_Republic 27757 T 8 8
364 Dominican_Republic 27758 G 8 8
365 Dominican_Republic 27759 A 8 8