National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A C D E F G H I K L M N P Q R S T V Y
*     3                                      
-     370                                      
?                                            
A     27                                      
C     18                                      
D     6                                      
E     24       1                              
F     30                                      
G     12                                      
H     9                                      
I     25                                      
K     21                                      
L     45                                      
M     6                                      
N     6                                      
P     18                                      
Q     15                                      
R     15                                      
S     21                                      
T     30                                      
V     24                                      
Y     15                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Bulgaria 27394 A 15 15
1 Bulgaria 27395 T 15 15
2 Bulgaria 27396 G 15 15
3 Bulgaria 27397 A 15 15
4 Bulgaria 27398 A 15 15
5 Bulgaria 27399 A 15 15
6 Bulgaria 27400 A 15 15
7 Bulgaria 27401 T 15 15
8 Bulgaria 27402 T 15 15
9 Bulgaria 27403 A 15 15
10 Bulgaria 27404 T 15 15
11 Bulgaria 27405 T 15 15
12 Bulgaria 27406 C 15 15
13 Bulgaria 27407 T 15 15
14 Bulgaria 27408 T 15 15
15 Bulgaria 27409 T 15 15
16 Bulgaria 27410 T 15 15
17 Bulgaria 27411 C 15 15
18 Bulgaria 27412 T 15 15
19 Bulgaria 27413 T 15 15
20 Bulgaria 27414 G 15 15
21 Bulgaria 27415 G 15 15
22 Bulgaria 27416 C 15 15
23 Bulgaria 27417 A 15 15
24 Bulgaria 27418 C 15 15
25 Bulgaria 27419 T 15 15
26 Bulgaria 27420 G 15 15
27 Bulgaria 27421 A 15 15
28 Bulgaria 27422 T 15 15
29 Bulgaria 27423 A 15 15
30 Bulgaria 27424 A 15 15
31 Bulgaria 27425 C 15 15
32 Bulgaria 27426 A 15 15
33 Bulgaria 27427 C 15 15
34 Bulgaria 27428 T 15 15
35 Bulgaria 27429 C 15 15
36 Bulgaria 27430 G 15 15
37 Bulgaria 27431 C 15 15
38 Bulgaria 27432 T 15 15
39 Bulgaria 27433 A 15 15
40 Bulgaria 27434 C 15 15
41 Bulgaria 27435 T 15 15
42 Bulgaria 27436 T 15 15
43 Bulgaria 27437 G 15 15
44 Bulgaria 27438 T 15 15
45 Bulgaria 27439 G 15 15
46 Bulgaria 27440 A 15 15
47 Bulgaria 27441 G 15 15
48 Bulgaria 27442 C 15 15
49 Bulgaria 27443 T 15 15
50 Bulgaria 27444 T 15 15
51 Bulgaria 27445 T 15 15
52 Bulgaria 27446 A 15 15
53 Bulgaria 27447 T 15 15
54 Bulgaria 27448 C 15 15
55 Bulgaria 27449 A 15 15
56 Bulgaria 27450 C 15 15
57 Bulgaria 27451 T 15 15
58 Bulgaria 27452 A 15 15
59 Bulgaria 27453 C 15 15
60 Bulgaria 27454 C 15 15
61 Bulgaria 27455 A 15 15
62 Bulgaria 27456 A 15 15
63 Bulgaria 27457 G 15 15
64 Bulgaria 27458 A 15 15
65 Bulgaria 27459 G 15 15
66 Bulgaria 27460 T 15 15
67 Bulgaria 27461 G 15 15
68 Bulgaria 27462 T 15 15
69 Bulgaria 27463 G 15 15
70 Bulgaria 27464 T 15 15
71 Bulgaria 27465 T 15 15
72 Bulgaria 27466 A 15 15
73 Bulgaria 27467 G 15 15
74 Bulgaria 27468 A 15 15
75 Bulgaria 27469 G 15 15
76 Bulgaria 27470 G 15 15
77 Bulgaria 27471 T 15 15
78 Bulgaria 27472 A 15 15
79 Bulgaria 27473 C 15 15
80 Bulgaria 27474 A 15 15
81 Bulgaria 27475 A 15 15
82 Bulgaria 27476 C 15 15
83 Bulgaria 27477 A 15 15
84 Bulgaria 27478 G 15 15
85 Bulgaria 27479 T 15 15
86 Bulgaria 27480 A 15 15
87 Bulgaria 27481 C 15 15
88 Bulgaria 27482 T 15 15
89 Bulgaria 27483 T 15 15
90 Bulgaria 27484 T 15 15
91 Bulgaria 27485 T 15 15
92 Bulgaria 27486 A 15 15
93 Bulgaria 27487 A 15 15
94 Bulgaria 27488 A 15 15
95 Bulgaria 27489 A 15 15
96 Bulgaria 27490 G 15 15
97 Bulgaria 27491 A 15 15
98 Bulgaria 27492 A 15 15
99 Bulgaria 27493 C 15 15
100 Bulgaria 27494 C 15 15
101 Bulgaria 27495 T 15 15
102 Bulgaria 27496 T 15 15
103 Bulgaria 27497 G 15 15
104 Bulgaria 27498 C 15 15
105 Bulgaria 27499 T 15 15
106 Bulgaria 27500 C 15 15
107 Bulgaria 27501 T 15 15
108 Bulgaria 27502 T 15 15
109 Bulgaria 27503 C 15 15
110 Bulgaria 27504 T 15 15
111 Bulgaria 27505 G 15 15
112 Bulgaria 27506 G 15 15
113 Bulgaria 27507 A 15 15
114 Bulgaria 27508 A 15 15
115 Bulgaria 27509 C 15 15
116 Bulgaria 27510 A 15 15
117 Bulgaria 27511 T 15 15
118 Bulgaria 27512 A 15 15
119 Bulgaria 27513 C 15 15
120 Bulgaria 27514 G 15 15
121 Bulgaria 27515 A 15 15
122 Bulgaria 27516 G 15 15
123 Bulgaria 27517 G 15 15
124 Bulgaria 27518 G 15 15
125 Bulgaria 27519 C 15 15
126 Bulgaria 27520 A 15 15
127 Bulgaria 27521 A 15 15
128 Bulgaria 27522 T 15 15
129 Bulgaria 27523 T 15 15
130 Bulgaria 27524 C 15 15
131 Bulgaria 27525 A 15 15
132 Bulgaria 27526 C 15 15
133 Bulgaria 27527 C 15 15
134 Bulgaria 27528 A 15 15
135 Bulgaria 27529 T 15 15
136 Bulgaria 27530 T 15 15
137 Bulgaria 27531 T 15 15
138 Bulgaria 27532 C 15 15
139 Bulgaria 27533 A 15 15
140 Bulgaria 27534 T 15 15
141 Bulgaria 27535 C 15 15
142 Bulgaria 27536 C 15 15
143 Bulgaria 27537 T 15 15
144 Bulgaria 27538 C 15 15
145 Bulgaria 27539 T 15 15
146 Bulgaria 27540 A 15 15
147 Bulgaria 27541 G 15 15
148 Bulgaria 27542 C 15 15
149 Bulgaria 27543 T 15 15
150 Bulgaria 27544 G 15 15
151 Bulgaria 27545 A 15 15
152 Bulgaria 27546 T 15 15
153 Bulgaria 27547 A 15 15
154 Bulgaria 27548 A 15 15
155 Bulgaria 27549 C 15 15
156 Bulgaria 27550 A 15 15
157 Bulgaria 27551 A 15 15
158 Bulgaria 27552 A 15 15
159 Bulgaria 27553 T 15 15
160 Bulgaria 27554 T 15 15
161 Bulgaria 27555 T 15 15
162 Bulgaria 27556 G 15 15
163 Bulgaria 27557 C 15 15
164 Bulgaria 27558 A 15 15
165 Bulgaria 27559 C 15 15
166 Bulgaria 27560 T 15 15
167 Bulgaria 27561 G 15 15
168 Bulgaria 27562 A 15 15
169 Bulgaria 27563 C 15 15
170 Bulgaria 27564 T 15 15
171 Bulgaria 27565 T 15 15
172 Bulgaria 27566 G 15 15
173 Bulgaria 27567 C 15 15
174 Bulgaria 27568 T 15 15
175 Bulgaria 27569 T 15 15
176 Bulgaria 27570 T 15 15
177 Bulgaria 27571 A 15 15
178 Bulgaria 27572 G 15 15
179 Bulgaria 27573 C 15 15
180 Bulgaria 27574 A 15 15
181 Bulgaria 27575 C 15 15
182 Bulgaria 27576 T 15 15
183 Bulgaria 27577 C 15 15
184 Bulgaria 27578 A 15 15
185 Bulgaria 27579 A 15 15
186 Bulgaria 27580 T 15 15
187 Bulgaria 27581 T 15 15
188 Bulgaria 27582 T 15 15
189 Bulgaria 27583 G 15 15
190 Bulgaria 27584 C 15 15
191 Bulgaria 27585 T 15 15
192 Bulgaria 27586 T 15 15
193 Bulgaria 27587 T 15 15
194 Bulgaria 27588 T 15 15
195 Bulgaria 27589 G 15 15
196 Bulgaria 27590 C 15 15
197 Bulgaria 27591 T 15 15
198 Bulgaria 27592 T 15 15
199 Bulgaria 27593 G 15 15
200 Bulgaria 27594 T 15 15
201 Bulgaria 27595 C 15 15
202 Bulgaria 27596 C 15 15
203 Bulgaria 27597 T 15 15
204 Bulgaria 27598 G 15 15
205 Bulgaria 27599 A 15 15
206 Bulgaria 27600 C 15 15
207 Bulgaria 27601 G 15 15
208 Bulgaria 27602 G 15 15
209 Bulgaria 27603 C 15 15
210 Bulgaria 27604 G 15 15
211 Bulgaria 27605 T 15 15
212 Bulgaria 27606 A 15 15
213 Bulgaria 27607 A 15 15
214 Bulgaria 27608 A 15 15
215 Bulgaria 27609 A 15 15
216 Bulgaria 27610 C 15 15
217 Bulgaria 27611 A 15 15
218 Bulgaria 27612 C 15 15
219 Bulgaria 27613 G 15 15
220 Bulgaria 27614 T 15 15
221 Bulgaria 27615 C 15 15
222 Bulgaria 27616 T 15 15
223 Bulgaria 27617 A 15 15
224 Bulgaria 27618 T 15 15
225 Bulgaria 27619 C 15 15
226 Bulgaria 27620 A 15 15
227 Bulgaria 27621 G 15 15
228 Bulgaria 27622 T 15 15
229 Bulgaria 27623 T 15 15
230 Bulgaria 27624 A 15 15
231 Bulgaria 27625 C 15 15
232 Bulgaria 27626 G 15 15
233 Bulgaria 27627 T 15 15
234 Bulgaria 27628 G 15 15
235 Bulgaria 27629 C 15 15
236 Bulgaria 27630 C 15 15
237 Bulgaria 27631 A 15 15
238 Bulgaria 27632 G 15 15
239 Bulgaria 27633 A 15 15
240 Bulgaria 27634 T 15 15
241 Bulgaria 27635 C 15 15
242 Bulgaria 27636 A 15 15
243 Bulgaria 27637 G 15 15
244 Bulgaria 27638 T 15 15
245 Bulgaria 27639 T 15 15
246 Bulgaria 27640 T 15 15
247 Bulgaria 27641 C 15 15
248 Bulgaria 27642 A 15 15
249 Bulgaria 27643 C 15 15
250 Bulgaria 27644 C 15 15
251 Bulgaria 27645 T 15 15
252 Bulgaria 27646 A 15 15
253 Bulgaria 27647 A 15 15
254 Bulgaria 27648 A 15 15
255 Bulgaria 27649 C 15 15
256 Bulgaria 27650 T 15 15
257 Bulgaria 27651 G 15 15
258 Bulgaria 27652 T 15 15
259 Bulgaria 27653 T 15 15
260 Bulgaria 27654 C 15 15
261 Bulgaria 27655 A 15 15
262 Bulgaria 27656 T 15 15
263 Bulgaria 27657 C 15 15
264 Bulgaria 27658 A 15 15
265 Bulgaria 27659 G 15 15
266 Bulgaria 27660 A 15 15
267 Bulgaria 27661 C 15 15
268 Bulgaria 27662 A 15 15
269 Bulgaria 27663 A 15 15
270 Bulgaria 27664 G 15 15
271 Bulgaria 27665 A 15 15
272 Bulgaria 27666 G 15 15
273 Bulgaria 27667 G 15 15
274 Bulgaria 27668 A 15 15
275 Bulgaria 27669 A G 15 14 Glu92Glu
276 Bulgaria 27670 G 15 15
277 Bulgaria 27671 T 15 15
278 Bulgaria 27672 T 15 15
279 Bulgaria 27673 C 15 15
280 Bulgaria 27674 A 15 15
281 Bulgaria 27675 A 15 15
282 Bulgaria 27676 G 15 15
283 Bulgaria 27677 A 15 15
284 Bulgaria 27678 A 15 15
285 Bulgaria 27679 C 15 15
286 Bulgaria 27680 T 15 15
287 Bulgaria 27681 T 15 15
288 Bulgaria 27682 T 15 15
289 Bulgaria 27683 A 15 15
290 Bulgaria 27684 C 15 15
291 Bulgaria 27685 T 15 15
292 Bulgaria 27686 C 15 15
293 Bulgaria 27687 T 15 15
294 Bulgaria 27688 C 15 15
295 Bulgaria 27689 C 15 15
296 Bulgaria 27690 A 15 15
297 Bulgaria 27691 A 15 15
298 Bulgaria 27692 T 15 15
299 Bulgaria 27693 T 15 15
300 Bulgaria 27694 T 15 15
301 Bulgaria 27695 T 15 15
302 Bulgaria 27696 T 15 15
303 Bulgaria 27697 C 15 15
304 Bulgaria 27698 T 15 15
305 Bulgaria 27699 T 15 15
306 Bulgaria 27700 A 15 15
307 Bulgaria 27701 T 15 15
308 Bulgaria 27702 T 15 15
309 Bulgaria 27703 G 15 15
310 Bulgaria 27704 T 15 15
311 Bulgaria 27705 T 15 15
312 Bulgaria 27706 G 15 15
313 Bulgaria 27707 C 15 15
314 Bulgaria 27708 G 15 15
315 Bulgaria 27709 G 15 15
316 Bulgaria 27710 C 15 15
317 Bulgaria 27711 A 15 15
318 Bulgaria 27712 A 15 15
319 Bulgaria 27713 T 15 15
320 Bulgaria 27714 A 15 15
321 Bulgaria 27715 G 15 15
322 Bulgaria 27716 T 15 15
323 Bulgaria 27717 G 15 15
324 Bulgaria 27718 T 15 15
325 Bulgaria 27719 T 15 15
326 Bulgaria 27720 T 15 15
327 Bulgaria 27721 A 15 15
328 Bulgaria 27722 T 15 15
329 Bulgaria 27723 A 15 15
330 Bulgaria 27724 A 15 15
331 Bulgaria 27725 C 15 15
332 Bulgaria 27726 A 15 15
333 Bulgaria 27727 C 15 15
334 Bulgaria 27728 T 15 15
335 Bulgaria 27729 T 15 15
336 Bulgaria 27730 T 15 15
337 Bulgaria 27731 G 15 15
338 Bulgaria 27732 C 15 15
339 Bulgaria 27733 T 15 15
340 Bulgaria 27734 T 15 15
341 Bulgaria 27735 C 15 15
342 Bulgaria 27736 A 15 15
343 Bulgaria 27737 C 15 15
344 Bulgaria 27738 A 15 15
345 Bulgaria 27739 C 15 15
346 Bulgaria 27740 T 15 15
347 Bulgaria 27741 C 15 15
348 Bulgaria 27742 A 15 15
349 Bulgaria 27743 A 15 15
350 Bulgaria 27744 A 15 15
351 Bulgaria 27745 A 15 15
352 Bulgaria 27746 G 15 15
353 Bulgaria 27747 A 15 15
354 Bulgaria 27748 A 15 15
355 Bulgaria 27749 A 15 15
356 Bulgaria 27750 G 15 15
357 Bulgaria 27751 A 15 15
358 Bulgaria 27752 C 15 15
359 Bulgaria 27753 A 15 15
360 Bulgaria 27754 G 15 15
361 Bulgaria 27755 A 15 15
362 Bulgaria 27756 A 15 15
363 Bulgaria 27757 T 15 15
364 Bulgaria 27758 G 15 15
365 Bulgaria 27759 A 15 15