National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A C D E F G H I K L M N P Q R S T V Y
*     3                                      
-     370                                      
?                                            
A     27                                      
C     18                                      
D     6                                      
E     24                                      
F     30                                      
G     12                                      
H     9                                      
I     25                                      
K     21                                      
L     45                                      
M     6                                      
N     6                                      
P     18                                      
Q     15                                      
R     15                                      
S     21                                      
T     30                                      
V     24                                      
Y     15                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Andorra 27394 A 1 1
1 Andorra 27395 T 1 1
2 Andorra 27396 G 1 1
3 Andorra 27397 A 1 1
4 Andorra 27398 A 1 1
5 Andorra 27399 A 1 1
6 Andorra 27400 A 1 1
7 Andorra 27401 T 1 1
8 Andorra 27402 T 1 1
9 Andorra 27403 A 1 1
10 Andorra 27404 T 1 1
11 Andorra 27405 T 1 1
12 Andorra 27406 C 1 1
13 Andorra 27407 T 1 1
14 Andorra 27408 T 1 1
15 Andorra 27409 T 1 1
16 Andorra 27410 T 1 1
17 Andorra 27411 C 1 1
18 Andorra 27412 T 1 1
19 Andorra 27413 T 1 1
20 Andorra 27414 G 1 1
21 Andorra 27415 G 1 1
22 Andorra 27416 C 1 1
23 Andorra 27417 A 1 1
24 Andorra 27418 C 1 1
25 Andorra 27419 T 1 1
26 Andorra 27420 G 1 1
27 Andorra 27421 A 1 1
28 Andorra 27422 T 1 1
29 Andorra 27423 A 1 1
30 Andorra 27424 A 1 1
31 Andorra 27425 C 1 1
32 Andorra 27426 A 1 1
33 Andorra 27427 C 1 1
34 Andorra 27428 T 1 1
35 Andorra 27429 C 1 1
36 Andorra 27430 G 1 1
37 Andorra 27431 C 1 1
38 Andorra 27432 T 1 1
39 Andorra 27433 A 1 1
40 Andorra 27434 C 1 1
41 Andorra 27435 T 1 1
42 Andorra 27436 T 1 1
43 Andorra 27437 G 1 1
44 Andorra 27438 T 1 1
45 Andorra 27439 G 1 1
46 Andorra 27440 A 1 1
47 Andorra 27441 G 1 1
48 Andorra 27442 C 1 1
49 Andorra 27443 T 1 1
50 Andorra 27444 T 1 1
51 Andorra 27445 T 1 1
52 Andorra 27446 A 1 1
53 Andorra 27447 T 1 1
54 Andorra 27448 C 1 1
55 Andorra 27449 A 1 1
56 Andorra 27450 C 1 1
57 Andorra 27451 T 1 1
58 Andorra 27452 A 1 1
59 Andorra 27453 C 1 1
60 Andorra 27454 C 1 1
61 Andorra 27455 A 1 1
62 Andorra 27456 A 1 1
63 Andorra 27457 G 1 1
64 Andorra 27458 A 1 1
65 Andorra 27459 G 1 1
66 Andorra 27460 T 1 1
67 Andorra 27461 G 1 1
68 Andorra 27462 T 1 1
69 Andorra 27463 G 1 1
70 Andorra 27464 T 1 1
71 Andorra 27465 T 1 1
72 Andorra 27466 A 1 1
73 Andorra 27467 G 1 1
74 Andorra 27468 A 1 1
75 Andorra 27469 G 1 1
76 Andorra 27470 G 1 1
77 Andorra 27471 T 1 1
78 Andorra 27472 A 1 1
79 Andorra 27473 C 1 1
80 Andorra 27474 A 1 1
81 Andorra 27475 A 1 1
82 Andorra 27476 C 1 1
83 Andorra 27477 A 1 1
84 Andorra 27478 G 1 1
85 Andorra 27479 T 1 1
86 Andorra 27480 A 1 1
87 Andorra 27481 C 1 1
88 Andorra 27482 T 1 1
89 Andorra 27483 T 1 1
90 Andorra 27484 T 1 1
91 Andorra 27485 T 1 1
92 Andorra 27486 A 1 1
93 Andorra 27487 A 1 1
94 Andorra 27488 A 1 1
95 Andorra 27489 A 1 1
96 Andorra 27490 G 1 1
97 Andorra 27491 A 1 1
98 Andorra 27492 A 1 1
99 Andorra 27493 C 1 1
100 Andorra 27494 C 1 1
101 Andorra 27495 T 1 1
102 Andorra 27496 T 1 1
103 Andorra 27497 G 1 1
104 Andorra 27498 C 1 1
105 Andorra 27499 T 1 1
106 Andorra 27500 C 1 1
107 Andorra 27501 T 1 1
108 Andorra 27502 T 1 1
109 Andorra 27503 C 1 1
110 Andorra 27504 T 1 1
111 Andorra 27505 G 1 1
112 Andorra 27506 G 1 1
113 Andorra 27507 A 1 1
114 Andorra 27508 A 1 1
115 Andorra 27509 C 1 1
116 Andorra 27510 A 1 1
117 Andorra 27511 T 1 1
118 Andorra 27512 A 1 1
119 Andorra 27513 C 1 1
120 Andorra 27514 G 1 1
121 Andorra 27515 A 1 1
122 Andorra 27516 G 1 1
123 Andorra 27517 G 1 1
124 Andorra 27518 G 1 1
125 Andorra 27519 C 1 1
126 Andorra 27520 A 1 1
127 Andorra 27521 A 1 1
128 Andorra 27522 T 1 1
129 Andorra 27523 T 1 1
130 Andorra 27524 C 1 1
131 Andorra 27525 A 1 1
132 Andorra 27526 C 1 1
133 Andorra 27527 C 1 1
134 Andorra 27528 A 1 1
135 Andorra 27529 T 1 1
136 Andorra 27530 T 1 1
137 Andorra 27531 T 1 1
138 Andorra 27532 C 1 1
139 Andorra 27533 A 1 1
140 Andorra 27534 T 1 1
141 Andorra 27535 C 1 1
142 Andorra 27536 C 1 1
143 Andorra 27537 T 1 1
144 Andorra 27538 C 1 1
145 Andorra 27539 T 1 1
146 Andorra 27540 A 1 1
147 Andorra 27541 G 1 1
148 Andorra 27542 C 1 1
149 Andorra 27543 T 1 1
150 Andorra 27544 G 1 1
151 Andorra 27545 A 1 1
152 Andorra 27546 T 1 1
153 Andorra 27547 A 1 1
154 Andorra 27548 A 1 1
155 Andorra 27549 C 1 1
156 Andorra 27550 A 1 1
157 Andorra 27551 A 1 1
158 Andorra 27552 A 1 1
159 Andorra 27553 T 1 1
160 Andorra 27554 T 1 1
161 Andorra 27555 T 1 1
162 Andorra 27556 G 1 1
163 Andorra 27557 C 1 1
164 Andorra 27558 A 1 1
165 Andorra 27559 C 1 1
166 Andorra 27560 T 1 1
167 Andorra 27561 G 1 1
168 Andorra 27562 A 1 1
169 Andorra 27563 C 1 1
170 Andorra 27564 T 1 1
171 Andorra 27565 T 1 1
172 Andorra 27566 G 1 1
173 Andorra 27567 C 1 1
174 Andorra 27568 T 1 1
175 Andorra 27569 T 1 1
176 Andorra 27570 T 1 1
177 Andorra 27571 A 1 1
178 Andorra 27572 G 1 1
179 Andorra 27573 C 1 1
180 Andorra 27574 A 1 1
181 Andorra 27575 C 1 1
182 Andorra 27576 T 1 1
183 Andorra 27577 C 1 1
184 Andorra 27578 A 1 1
185 Andorra 27579 A 1 1
186 Andorra 27580 T 1 1
187 Andorra 27581 T 1 1
188 Andorra 27582 T 1 1
189 Andorra 27583 G 1 1
190 Andorra 27584 C 1 1
191 Andorra 27585 T 1 1
192 Andorra 27586 T 1 1
193 Andorra 27587 T 1 1
194 Andorra 27588 T 1 1
195 Andorra 27589 G 1 1
196 Andorra 27590 C 1 1
197 Andorra 27591 T 1 1
198 Andorra 27592 T 1 1
199 Andorra 27593 G 1 1
200 Andorra 27594 T 1 1
201 Andorra 27595 C 1 1
202 Andorra 27596 C 1 1
203 Andorra 27597 T 1 1
204 Andorra 27598 G 1 1
205 Andorra 27599 A 1 1
206 Andorra 27600 C 1 1
207 Andorra 27601 G 1 1
208 Andorra 27602 G 1 1
209 Andorra 27603 C 1 1
210 Andorra 27604 G 1 1
211 Andorra 27605 T 1 1
212 Andorra 27606 A 1 1
213 Andorra 27607 A 1 1
214 Andorra 27608 A 1 1
215 Andorra 27609 A 1 1
216 Andorra 27610 C 1 1
217 Andorra 27611 A 1 1
218 Andorra 27612 C 1 1
219 Andorra 27613 G 1 1
220 Andorra 27614 T 1 1
221 Andorra 27615 C 1 1
222 Andorra 27616 T 1 1
223 Andorra 27617 A 1 1
224 Andorra 27618 T 1 1
225 Andorra 27619 C 1 1
226 Andorra 27620 A 1 1
227 Andorra 27621 G 1 1
228 Andorra 27622 T 1 1
229 Andorra 27623 T 1 1
230 Andorra 27624 A 1 1
231 Andorra 27625 C 1 1
232 Andorra 27626 G 1 1
233 Andorra 27627 T 1 1
234 Andorra 27628 G 1 1
235 Andorra 27629 C 1 1
236 Andorra 27630 C 1 1
237 Andorra 27631 A 1 1
238 Andorra 27632 G 1 1
239 Andorra 27633 A 1 1
240 Andorra 27634 T 1 1
241 Andorra 27635 C 1 1
242 Andorra 27636 A 1 1
243 Andorra 27637 G 1 1
244 Andorra 27638 T 1 1
245 Andorra 27639 T 1 1
246 Andorra 27640 T 1 1
247 Andorra 27641 C 1 1
248 Andorra 27642 A 1 1
249 Andorra 27643 C 1 1
250 Andorra 27644 C 1 1
251 Andorra 27645 T 1 1
252 Andorra 27646 A 1 1
253 Andorra 27647 A 1 1
254 Andorra 27648 A 1 1
255 Andorra 27649 C 1 1
256 Andorra 27650 T 1 1
257 Andorra 27651 G 1 1
258 Andorra 27652 T 1 1
259 Andorra 27653 T 1 1
260 Andorra 27654 C 1 1
261 Andorra 27655 A 1 1
262 Andorra 27656 T 1 1
263 Andorra 27657 C 1 1
264 Andorra 27658 A 1 1
265 Andorra 27659 G 1 1
266 Andorra 27660 A 1 1
267 Andorra 27661 C 1 1
268 Andorra 27662 A 1 1
269 Andorra 27663 A 1 1
270 Andorra 27664 G 1 1
271 Andorra 27665 A 1 1
272 Andorra 27666 G 1 1
273 Andorra 27667 G 1 1
274 Andorra 27668 A 1 1
275 Andorra 27669 A 1 1
276 Andorra 27670 G 1 1
277 Andorra 27671 T 1 1
278 Andorra 27672 T 1 1
279 Andorra 27673 C 1 1
280 Andorra 27674 A 1 1
281 Andorra 27675 A 1 1
282 Andorra 27676 G 1 1
283 Andorra 27677 A 1 1
284 Andorra 27678 A 1 1
285 Andorra 27679 C 1 1
286 Andorra 27680 T 1 1
287 Andorra 27681 T 1 1
288 Andorra 27682 T 1 1
289 Andorra 27683 A 1 1
290 Andorra 27684 C 1 1
291 Andorra 27685 T 1 1
292 Andorra 27686 C 1 1
293 Andorra 27687 T 1 1
294 Andorra 27688 C 1 1
295 Andorra 27689 C 1 1
296 Andorra 27690 A 1 1
297 Andorra 27691 A 1 1
298 Andorra 27692 T 1 1
299 Andorra 27693 T 1 1
300 Andorra 27694 T 1 1
301 Andorra 27695 T 1 1
302 Andorra 27696 T 1 1
303 Andorra 27697 C 1 1
304 Andorra 27698 T 1 1
305 Andorra 27699 T 1 1
306 Andorra 27700 A 1 1
307 Andorra 27701 T 1 1
308 Andorra 27702 T 1 1
309 Andorra 27703 G 1 1
310 Andorra 27704 T 1 1
311 Andorra 27705 T 1 1
312 Andorra 27706 G 1 1
313 Andorra 27707 C 1 1
314 Andorra 27708 G 1 1
315 Andorra 27709 G 1 1
316 Andorra 27710 C 1 1
317 Andorra 27711 A 1 1
318 Andorra 27712 A 1 1
319 Andorra 27713 T 1 1
320 Andorra 27714 A 1 1
321 Andorra 27715 G 1 1
322 Andorra 27716 T 1 1
323 Andorra 27717 G 1 1
324 Andorra 27718 T 1 1
325 Andorra 27719 T 1 1
326 Andorra 27720 T 1 1
327 Andorra 27721 A 1 1
328 Andorra 27722 T 1 1
329 Andorra 27723 A 1 1
330 Andorra 27724 A 1 1
331 Andorra 27725 C 1 1
332 Andorra 27726 A 1 1
333 Andorra 27727 C 1 1
334 Andorra 27728 T 1 1
335 Andorra 27729 T 1 1
336 Andorra 27730 T 1 1
337 Andorra 27731 G 1 1
338 Andorra 27732 C 1 1
339 Andorra 27733 T 1 1
340 Andorra 27734 T 1 1
341 Andorra 27735 C 1 1
342 Andorra 27736 A 1 1
343 Andorra 27737 C 1 1
344 Andorra 27738 A 1 1
345 Andorra 27739 C 1 1
346 Andorra 27740 T 1 1
347 Andorra 27741 C 1 1
348 Andorra 27742 A 1 1
349 Andorra 27743 A 1 1
350 Andorra 27744 A 1 1
351 Andorra 27745 A 1 1
352 Andorra 27746 G 1 1
353 Andorra 27747 A 1 1
354 Andorra 27748 A 1 1
355 Andorra 27749 A 1 1
356 Andorra 27750 G 1 1
357 Andorra 27751 A 1 1
358 Andorra 27752 C 1 1
359 Andorra 27753 A 1 1
360 Andorra 27754 G 1 1
361 Andorra 27755 A 1 1
362 Andorra 27756 A 1 1
363 Andorra 27757 T 1 1
364 Andorra 27758 G 1 1
365 Andorra 27759 A 1 1