National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
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Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A C D F G I L M N P Q R S T V Y
*     2                                
-     117                                
?                                      
A     6                                
C     3                                
D     3                                
F     12                                
G     3                                
I     9                                
L     12                                
M     6                                
N     16                                
P     3                                
Q     3                                
R     6                                
S     6                                
T     6                                
V     12             1                  
Y     9                                

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Serbia 29558 A 147 147
1 Serbia 29559 T 147 147
2 Serbia 29560 G 147 147
3 Serbia 29561 G 147 147
4 Serbia 29562 G 147 147
5 Serbia 29563 C 147 147
6 Serbia 29564 T 147 147
7 Serbia 29565 A 147 147
8 Serbia 29566 T 147 147
9 Serbia 29567 A 147 147
10 Serbia 29568 T 147 147
11 Serbia 29569 A 147 147
12 Serbia 29570 A 147 147
13 Serbia 29571 A 147 147
14 Serbia 29572 C 147 147
15 Serbia 29573 G 147 147
16 Serbia 29574 T 147 147
17 Serbia 29575 T 147 147
18 Serbia 29576 T 147 147
19 Serbia 29577 T 147 147
20 Serbia 29578 C 147 147
21 Serbia 29579 G 147 147
22 Serbia 29580 C 147 147
23 Serbia 29581 T 147 147
24 Serbia 29582 T 147 147
25 Serbia 29583 T 147 147
26 Serbia 29584 T 147 147
27 Serbia 29585 C 147 147
28 Serbia 29586 C 147 147
29 Serbia 29587 G 147 147
30 Serbia 29588 T 147 147
31 Serbia 29589 T 147 147
32 Serbia 29590 T 147 147
33 Serbia 29591 A 147 147
34 Serbia 29592 C 147 147
35 Serbia 29593 G 147 147
36 Serbia 29594 A 147 147
37 Serbia 29595 T 147 147
38 Serbia 29596 A 147 147
39 Serbia 29597 T 147 147
40 Serbia 29598 A 147 147
41 Serbia 29599 T 147 147
42 Serbia 29600 A 147 147
43 Serbia 29601 G 147 147
44 Serbia 29602 T 147 147
45 Serbia 29603 C 147 147
46 Serbia 29604 T 147 147
47 Serbia 29605 A 147 147
48 Serbia 29606 C 147 147
49 Serbia 29607 T 147 147
50 Serbia 29608 C 147 147
51 Serbia 29609 T 147 147
52 Serbia 29610 T 147 147
53 Serbia 29611 G 147 147
54 Serbia 29612 T 147 147
55 Serbia 29613 G 147 147
56 Serbia 29614 C 147 147
57 Serbia 29615 A 147 147
58 Serbia 29616 G 147 147
59 Serbia 29617 A 147 147
60 Serbia 29618 A 147 147
61 Serbia 29619 T 147 147
62 Serbia 29620 G 147 147
63 Serbia 29621 A 147 147
64 Serbia 29622 A 147 147
65 Serbia 29623 T 147 147
66 Serbia 29624 T 147 147
67 Serbia 29625 C 147 147
68 Serbia 29626 T 147 147
69 Serbia 29627 C 147 147
70 Serbia 29628 G 147 147
71 Serbia 29629 T 147 147
72 Serbia 29630 A 147 147
73 Serbia 29631 A 147 147
74 Serbia 29632 C 147 147
75 Serbia 29633 T 147 147
76 Serbia 29634 A 147 147
77 Serbia 29635 C 147 147
78 Serbia 29636 A 147 147
79 Serbia 29637 T 147 147
80 Serbia 29638 A 147 147
81 Serbia 29639 G 147 147
82 Serbia 29640 C 147 147
83 Serbia 29641 A 147 147
84 Serbia 29642 C 147 147
85 Serbia 29643 A 147 147
86 Serbia 29644 A 147 147
87 Serbia 29645 G T 147 146 Val30Leu
88 Serbia 29646 T 147 147
89 Serbia 29647 A 147 147
90 Serbia 29648 G 147 147
91 Serbia 29649 A 147 147
92 Serbia 29650 T 147 147
93 Serbia 29651 G 147 147
94 Serbia 29652 T 147 147
95 Serbia 29653 A 147 147
96 Serbia 29654 G 147 147
97 Serbia 29655 T 147 147
98 Serbia 29656 T 147 147
99 Serbia 29657 A 147 147
100 Serbia 29658 A 147 147
101 Serbia 29659 C 147 147
102 Serbia 29660 T 147 147
103 Serbia 29661 T 147 147
104 Serbia 29662 T 147 147
105 Serbia 29663 A 147 147
106 Serbia 29664 A 147 147
107 Serbia 29665 T 147 147
108 Serbia 29666 C 147 147
109 Serbia 29667 T 147 147
110 Serbia 29668 C 147 147
111 Serbia 29669 A 147 147
112 Serbia 29670 C 147 147
113 Serbia 29671 A 147 147
114 Serbia 29672 T 147 147
115 Serbia 29673 A 147 147
116 Serbia 29674 G 147 147