National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G I K L M N P Q R S T V W Y
-   339                                      
?                                          
A   30                                      
C   9                                      
D   18                                      
E   9                                      
F   12                                      
G   27                                      
I   6                                      
K   21                                      
L   45                                      
M   6                                      
N   21                                      
P   18                                      
Q   12                                      
R   18                                      
S   15                                      
T   36                                      
V   18                                      
W   3                                      
Y   15                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Republic_of_Congo 12686 A 11 11
1 Republic_of_Congo 12687 A 11 11
2 Republic_of_Congo 12688 T 11 11
3 Republic_of_Congo 12689 A 11 11
4 Republic_of_Congo 12690 A 11 11
5 Republic_of_Congo 12691 T 11 11
6 Republic_of_Congo 12692 G 11 11
7 Republic_of_Congo 12693 A 11 11
8 Republic_of_Congo 12694 G 11 11
9 Republic_of_Congo 12695 C 11 11
10 Republic_of_Congo 12696 T 11 11
11 Republic_of_Congo 12697 T 11 11
12 Republic_of_Congo 12698 A 11 11
13 Republic_of_Congo 12699 G 11 11
14 Republic_of_Congo 12700 T 11 11
15 Republic_of_Congo 12701 C 11 11
16 Republic_of_Congo 12702 C 11 11
17 Republic_of_Congo 12703 T 11 11
18 Republic_of_Congo 12704 G 11 11
19 Republic_of_Congo 12705 T 11 11
20 Republic_of_Congo 12706 T 11 11
21 Republic_of_Congo 12707 G 11 11
22 Republic_of_Congo 12708 C 11 11
23 Republic_of_Congo 12709 A 11 11
24 Republic_of_Congo 12710 C 11 11
25 Republic_of_Congo 12711 T 11 11
26 Republic_of_Congo 12712 A 11 11
27 Republic_of_Congo 12713 C 11 11
28 Republic_of_Congo 12714 G 11 11
29 Republic_of_Congo 12715 A 11 11
30 Republic_of_Congo 12716 C 11 11
31 Republic_of_Congo 12717 A 11 11
32 Republic_of_Congo 12718 G 11 11
33 Republic_of_Congo 12719 A 11 11
34 Republic_of_Congo 12720 T 11 11
35 Republic_of_Congo 12721 G 11 11
36 Republic_of_Congo 12722 T 11 11
37 Republic_of_Congo 12723 C 11 11
38 Republic_of_Congo 12724 T 11 11
39 Republic_of_Congo 12725 T 11 11
40 Republic_of_Congo 12726 G 11 11
41 Republic_of_Congo 12727 T 11 11
42 Republic_of_Congo 12728 G 11 11
43 Republic_of_Congo 12729 C 11 11
44 Republic_of_Congo 12730 T 11 11
45 Republic_of_Congo 12731 G 11 11
46 Republic_of_Congo 12732 C 11 11
47 Republic_of_Congo 12733 C 11 11
48 Republic_of_Congo 12734 G 11 11
49 Republic_of_Congo 12735 G 11 11
50 Republic_of_Congo 12736 T 11 11
51 Republic_of_Congo 12737 A 11 11
52 Republic_of_Congo 12738 C 11 11
53 Republic_of_Congo 12739 T 11 11
54 Republic_of_Congo 12740 A 11 11
55 Republic_of_Congo 12741 C 11 11
56 Republic_of_Congo 12742 A 11 11
57 Republic_of_Congo 12743 C 11 11
58 Republic_of_Congo 12744 A 11 11
59 Republic_of_Congo 12745 A 11 11
60 Republic_of_Congo 12746 A 11 11
61 Republic_of_Congo 12747 C 11 11
62 Republic_of_Congo 12748 T 11 11
63 Republic_of_Congo 12749 G 11 11
64 Republic_of_Congo 12750 C 11 11
65 Republic_of_Congo 12751 T 11 11
66 Republic_of_Congo 12752 T 11 11
67 Republic_of_Congo 12753 G 11 11
68 Republic_of_Congo 12754 C 11 11
69 Republic_of_Congo 12755 A 11 11
70 Republic_of_Congo 12756 C 11 11
71 Republic_of_Congo 12757 T 11 11
72 Republic_of_Congo 12758 G 11 11
73 Republic_of_Congo 12759 A 11 11
74 Republic_of_Congo 12760 T 11 11
75 Republic_of_Congo 12761 G 11 11
76 Republic_of_Congo 12762 A 11 11
77 Republic_of_Congo 12763 C 11 11
78 Republic_of_Congo 12764 A 11 11
79 Republic_of_Congo 12765 A 11 11
80 Republic_of_Congo 12766 T 11 11
81 Republic_of_Congo 12767 G 11 11
82 Republic_of_Congo 12768 C 11 11
83 Republic_of_Congo 12769 G 11 11
84 Republic_of_Congo 12770 T 11 11
85 Republic_of_Congo 12771 T 11 11
86 Republic_of_Congo 12772 A 11 11
87 Republic_of_Congo 12773 G 11 11
88 Republic_of_Congo 12774 C 11 11
89 Republic_of_Congo 12775 T 11 11
90 Republic_of_Congo 12776 T 11 11
91 Republic_of_Congo 12777 A 11 11
92 Republic_of_Congo 12778 C 11 11
93 Republic_of_Congo 12779 T 11 11
94 Republic_of_Congo 12780 A 11 11
95 Republic_of_Congo 12781 C 11 11
96 Republic_of_Congo 12782 A 11 11
97 Republic_of_Congo 12783 A 11 11
98 Republic_of_Congo 12784 C 11 11
99 Republic_of_Congo 12785 A 11 11
100 Republic_of_Congo 12786 C 11 11
101 Republic_of_Congo 12787 A 11 11
102 Republic_of_Congo 12788 A 11 11
103 Republic_of_Congo 12789 C 11 11
104 Republic_of_Congo 12790 A 11 11
105 Republic_of_Congo 12791 A 11 11
106 Republic_of_Congo 12792 A 11 11
107 Republic_of_Congo 12793 G 11 11
108 Republic_of_Congo 12794 G 11 11
109 Republic_of_Congo 12795 G 11 11
110 Republic_of_Congo 12796 A 11 11
111 Republic_of_Congo 12797 G 11 11
112 Republic_of_Congo 12798 G 11 11
113 Republic_of_Congo 12799 T 11 11
114 Republic_of_Congo 12800 A 11 11
115 Republic_of_Congo 12801 G 11 11
116 Republic_of_Congo 12802 G 11 11
117 Republic_of_Congo 12803 T 11 11
118 Republic_of_Congo 12804 T 11 11
119 Republic_of_Congo 12805 T 11 11
120 Republic_of_Congo 12806 G 11 11
121 Republic_of_Congo 12807 T 11 11
122 Republic_of_Congo 12808 A 11 11
123 Republic_of_Congo 12809 C 11 11
124 Republic_of_Congo 12810 T 11 11
125 Republic_of_Congo 12811 T 11 11
126 Republic_of_Congo 12812 G 11 11
127 Republic_of_Congo 12813 C 11 11
128 Republic_of_Congo 12814 A 11 11
129 Republic_of_Congo 12815 C 11 11
130 Republic_of_Congo 12816 T 11 11
131 Republic_of_Congo 12817 G 11 11
132 Republic_of_Congo 12818 T 11 11
133 Republic_of_Congo 12819 T 11 11
134 Republic_of_Congo 12820 A 11 11
135 Republic_of_Congo 12821 T 11 11
136 Republic_of_Congo 12822 C 11 11
137 Republic_of_Congo 12823 C 11 11
138 Republic_of_Congo 12824 G 11 11
139 Republic_of_Congo 12825 A 11 11
140 Republic_of_Congo 12826 T 11 11
141 Republic_of_Congo 12827 T 11 11
142 Republic_of_Congo 12828 T 11 11
143 Republic_of_Congo 12829 A 11 11
144 Republic_of_Congo 12830 C 11 11
145 Republic_of_Congo 12831 A 11 11
146 Republic_of_Congo 12832 G 11 11
147 Republic_of_Congo 12833 G 11 11
148 Republic_of_Congo 12834 A 11 11
149 Republic_of_Congo 12835 T 11 11
150 Republic_of_Congo 12836 T 11 11
151 Republic_of_Congo 12837 T 11 11
152 Republic_of_Congo 12838 G 11 11
153 Republic_of_Congo 12839 A 11 11
154 Republic_of_Congo 12840 A 11 11
155 Republic_of_Congo 12841 A 11 11
156 Republic_of_Congo 12842 T 11 11
157 Republic_of_Congo 12843 G 11 11
158 Republic_of_Congo 12844 G 11 11
159 Republic_of_Congo 12845 G 11 11
160 Republic_of_Congo 12846 C 11 11
161 Republic_of_Congo 12847 T 11 11
162 Republic_of_Congo 12848 A 11 11
163 Republic_of_Congo 12849 G 11 11
164 Republic_of_Congo 12850 A 11 11
165 Republic_of_Congo 12851 T 11 11
166 Republic_of_Congo 12852 T 11 11
167 Republic_of_Congo 12853 C 11 11
168 Republic_of_Congo 12854 C 11 11
169 Republic_of_Congo 12855 C 11 11
170 Republic_of_Congo 12856 T 11 11
171 Republic_of_Congo 12857 A 11 11
172 Republic_of_Congo 12858 A 11 11
173 Republic_of_Congo 12859 G 11 11
174 Republic_of_Congo 12860 A 11 11
175 Republic_of_Congo 12861 G 11 11
176 Republic_of_Congo 12862 T 11 11
177 Republic_of_Congo 12863 G 11 11
178 Republic_of_Congo 12864 A 11 11
179 Republic_of_Congo 12865 T 11 11
180 Republic_of_Congo 12866 G 11 11
181 Republic_of_Congo 12867 G 11 11
182 Republic_of_Congo 12868 A 11 11
183 Republic_of_Congo 12869 A 11 11
184 Republic_of_Congo 12870 C 11 11
185 Republic_of_Congo 12871 T 11 11
186 Republic_of_Congo 12872 G 11 11
187 Republic_of_Congo 12873 G 11 11
188 Republic_of_Congo 12874 T 11 11
189 Republic_of_Congo 12875 A 11 11
190 Republic_of_Congo 12876 C 11 11
191 Republic_of_Congo 12877 T 11 11
192 Republic_of_Congo 12878 A 11 11
193 Republic_of_Congo 12879 T 11 11
194 Republic_of_Congo 12880 C 11 11
195 Republic_of_Congo 12881 T 11 11
196 Republic_of_Congo 12882 A 11 11
197 Republic_of_Congo 12883 T 11 11
198 Republic_of_Congo 12884 A 11 11
199 Republic_of_Congo 12885 C 11 11
200 Republic_of_Congo 12886 A 11 11
201 Republic_of_Congo 12887 G 11 11
202 Republic_of_Congo 12888 A 11 11
203 Republic_of_Congo 12889 A 11 11
204 Republic_of_Congo 12890 C 11 11
205 Republic_of_Congo 12891 T 11 11
206 Republic_of_Congo 12892 G 11 11
207 Republic_of_Congo 12893 G 11 11
208 Republic_of_Congo 12894 A 11 11
209 Republic_of_Congo 12895 A 11 11
210 Republic_of_Congo 12896 C 11 11
211 Republic_of_Congo 12897 C 11 11
212 Republic_of_Congo 12898 A 11 11
213 Republic_of_Congo 12899 C 11 11
214 Republic_of_Congo 12900 C 11 11
215 Republic_of_Congo 12901 T 11 11
216 Republic_of_Congo 12902 T 11 11
217 Republic_of_Congo 12903 G 11 11
218 Republic_of_Congo 12904 T 11 11
219 Republic_of_Congo 12905 A 11 11
220 Republic_of_Congo 12906 G 11 11
221 Republic_of_Congo 12907 G 11 11
222 Republic_of_Congo 12908 T 11 11
223 Republic_of_Congo 12909 T 11 11
224 Republic_of_Congo 12910 T 11 11
225 Republic_of_Congo 12911 G 11 11
226 Republic_of_Congo 12912 T 11 11
227 Republic_of_Congo 12913 T 11 11
228 Republic_of_Congo 12914 A 11 11
229 Republic_of_Congo 12915 C 11 11
230 Republic_of_Congo 12916 A 11 11
231 Republic_of_Congo 12917 G 11 11
232 Republic_of_Congo 12918 A 11 11
233 Republic_of_Congo 12919 C 11 11
234 Republic_of_Congo 12920 A 11 11
235 Republic_of_Congo 12921 C 11 11
236 Republic_of_Congo 12922 A 11 11
237 Republic_of_Congo 12923 C 11 11
238 Republic_of_Congo 12924 C 11 11
239 Republic_of_Congo 12925 T 11 11
240 Republic_of_Congo 12926 A 11 11
241 Republic_of_Congo 12927 A 11 11
242 Republic_of_Congo 12928 A 11 11
243 Republic_of_Congo 12929 G 11 11
244 Republic_of_Congo 12930 G 11 11
245 Republic_of_Congo 12931 T 11 11
246 Republic_of_Congo 12932 C 11 11
247 Republic_of_Congo 12933 C 11 11
248 Republic_of_Congo 12934 T 11 11
249 Republic_of_Congo 12935 A 11 11
250 Republic_of_Congo 12936 A 11 11
251 Republic_of_Congo 12937 A 11 11
252 Republic_of_Congo 12938 G 11 11
253 Republic_of_Congo 12939 T 11 11
254 Republic_of_Congo 12940 G 11 11
255 Republic_of_Congo 12941 A 11 11
256 Republic_of_Congo 12942 A 11 11
257 Republic_of_Congo 12943 G 11 11
258 Republic_of_Congo 12944 T 11 11
259 Republic_of_Congo 12945 A 11 11
260 Republic_of_Congo 12946 T 11 11
261 Republic_of_Congo 12947 T 11 11
262 Republic_of_Congo 12948 T 11 11
263 Republic_of_Congo 12949 A 11 11
264 Republic_of_Congo 12950 T 11 11
265 Republic_of_Congo 12951 A 11 11
266 Republic_of_Congo 12952 C 11 11
267 Republic_of_Congo 12953 T 11 11
268 Republic_of_Congo 12954 T 11 11
269 Republic_of_Congo 12955 T 11 11
270 Republic_of_Congo 12956 A 11 11
271 Republic_of_Congo 12957 T 11 11
272 Republic_of_Congo 12958 T 11 11
273 Republic_of_Congo 12959 A 11 11
274 Republic_of_Congo 12960 A 11 11
275 Republic_of_Congo 12961 A 11 11
276 Republic_of_Congo 12962 G 11 11
277 Republic_of_Congo 12963 G 11 11
278 Republic_of_Congo 12964 A 11 11
279 Republic_of_Congo 12965 T 11 11
280 Republic_of_Congo 12966 T 11 11
281 Republic_of_Congo 12967 A 11 11
282 Republic_of_Congo 12968 A 11 11
283 Republic_of_Congo 12969 A 11 11
284 Republic_of_Congo 12970 C 11 11
285 Republic_of_Congo 12971 A 11 11
286 Republic_of_Congo 12972 A 11 11
287 Republic_of_Congo 12973 C 11 11
288 Republic_of_Congo 12974 C 11 11
289 Republic_of_Congo 12975 T 11 11
290 Republic_of_Congo 12976 A 11 11
291 Republic_of_Congo 12977 A 11 11
292 Republic_of_Congo 12978 A 11 11
293 Republic_of_Congo 12979 T 11 11
294 Republic_of_Congo 12980 A 11 11
295 Republic_of_Congo 12981 G 11 11
296 Republic_of_Congo 12982 A 11 11
297 Republic_of_Congo 12983 G 11 11
298 Republic_of_Congo 12984 G 11 11
299 Republic_of_Congo 12985 T 11 11
300 Republic_of_Congo 12986 A 11 11
301 Republic_of_Congo 12987 T 11 11
302 Republic_of_Congo 12988 G 11 11
303 Republic_of_Congo 12989 G 11 11
304 Republic_of_Congo 12990 T 11 11
305 Republic_of_Congo 12991 A 11 11
306 Republic_of_Congo 12992 C 11 11
307 Republic_of_Congo 12993 T 11 11
308 Republic_of_Congo 12994 T 11 11
309 Republic_of_Congo 12995 G 11 11
310 Republic_of_Congo 12996 G 11 11
311 Republic_of_Congo 12997 T 11 11
312 Republic_of_Congo 12998 A 11 11
313 Republic_of_Congo 12999 G 11 11
314 Republic_of_Congo 13000 T 11 11
315 Republic_of_Congo 13001 T 11 11
316 Republic_of_Congo 13002 T 11 11
317 Republic_of_Congo 13003 A 11 11
318 Republic_of_Congo 13004 G 11 11
319 Republic_of_Congo 13005 C 11 11
320 Republic_of_Congo 13006 T 11 11
321 Republic_of_Congo 13007 G 11 11
322 Republic_of_Congo 13008 C 11 11
323 Republic_of_Congo 13009 C 11 11
324 Republic_of_Congo 13010 A 11 11
325 Republic_of_Congo 13011 C 11 11
326 Republic_of_Congo 13012 A 11 11
327 Republic_of_Congo 13013 G 11 11
328 Republic_of_Congo 13014 T 11 11
329 Republic_of_Congo 13015 A 11 11
330 Republic_of_Congo 13016 C 11 11
331 Republic_of_Congo 13017 G 11 11
332 Republic_of_Congo 13018 T 11 11
333 Republic_of_Congo 13019 C 11 11
334 Republic_of_Congo 13020 T 11 11
335 Republic_of_Congo 13021 A 11 11
336 Republic_of_Congo 13022 C 11 11
337 Republic_of_Congo 13023 A 11 11
338 Republic_of_Congo 13024 A 11 11