National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G I K L M N P Q R S T V W Y
-   339                                      
?                                          
A   30                                      
C   9                                      
D   18                                      
E   9                                      
F   12                                      
G   27                                      
I   6                                      
K   21                     1                
L   45                 1                    
M   6                                      
N   21                                      
P   18                                      
Q   12                         1            
R   18                                      
S   15                                      
T   36                                      
V   18                                      
W   3                                      
Y   15                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Philippines 12686 A 37 37
1 Philippines 12687 A 37 37
2 Philippines 12688 T 37 37
3 Philippines 12689 A 37 37
4 Philippines 12690 A 37 37
5 Philippines 12691 T 37 37
6 Philippines 12692 G 37 37
7 Philippines 12693 A 37 37
8 Philippines 12694 G 37 37
9 Philippines 12695 C 37 37
10 Philippines 12696 T 37 37
11 Philippines 12697 T 37 37
12 Philippines 12698 A 37 37
13 Philippines 12699 G 37 37
14 Philippines 12700 T 37 37
15 Philippines 12701 C 37 37
16 Philippines 12702 C 37 37
17 Philippines 12703 T 37 37
18 Philippines 12704 G 37 37
19 Philippines 12705 T 37 37
20 Philippines 12706 T 37 37
21 Philippines 12707 G 37 37
22 Philippines 12708 C 37 37
23 Philippines 12709 A 37 37
24 Philippines 12710 C 37 37
25 Philippines 12711 T 37 37
26 Philippines 12712 A 37 37
27 Philippines 12713 C 37 37
28 Philippines 12714 G 37 37
29 Philippines 12715 A 37 37
30 Philippines 12716 C 37 37
31 Philippines 12717 A 37 37
32 Philippines 12718 G A 37 36 Gln4151Gln
33 Philippines 12719 A 37 37
34 Philippines 12720 T 37 37
35 Philippines 12721 G 37 37
36 Philippines 12722 T 37 37
37 Philippines 12723 C 37 37
38 Philippines 12724 T 37 37
39 Philippines 12725 T 37 37
40 Philippines 12726 G 37 37
41 Philippines 12727 T 37 37
42 Philippines 12728 G 37 37
43 Philippines 12729 C 37 37
44 Philippines 12730 T 37 37
45 Philippines 12731 G 37 37
46 Philippines 12732 C 37 37
47 Philippines 12733 C 37 37
48 Philippines 12734 G 37 37
49 Philippines 12735 G 37 37
50 Philippines 12736 T 37 37
51 Philippines 12737 A 37 37
52 Philippines 12738 C 37 37
53 Philippines 12739 T 37 37
54 Philippines 12740 A 37 37
55 Philippines 12741 C 37 37
56 Philippines 12742 A 37 37
57 Philippines 12743 C 37 37
58 Philippines 12744 A 37 37
59 Philippines 12745 A 37 37
60 Philippines 12746 A 37 37
61 Philippines 12747 C 37 37
62 Philippines 12748 T 37 37
63 Philippines 12749 G 37 37
64 Philippines 12750 C 37 37
65 Philippines 12751 T 37 37
66 Philippines 12752 T 37 37
67 Philippines 12753 G 37 37
68 Philippines 12754 C 37 37
69 Philippines 12755 A 37 37
70 Philippines 12756 C 37 37
71 Philippines 12757 T 37 37
72 Philippines 12758 G 37 37
73 Philippines 12759 A 37 37
74 Philippines 12760 T 37 37
75 Philippines 12761 G 37 37
76 Philippines 12762 A 37 37
77 Philippines 12763 C 37 37
78 Philippines 12764 A 37 37
79 Philippines 12765 A 37 37
80 Philippines 12766 T 37 37
81 Philippines 12767 G 37 37
82 Philippines 12768 C 37 37
83 Philippines 12769 G 37 37
84 Philippines 12770 T 37 37
85 Philippines 12771 T 37 37
86 Philippines 12772 A 37 37
87 Philippines 12773 G 37 37
88 Philippines 12774 C 37 37
89 Philippines 12775 T 37 37
90 Philippines 12776 T 37 37
91 Philippines 12777 A 37 37
92 Philippines 12778 C 37 37
93 Philippines 12779 T 37 37
94 Philippines 12780 A 37 37
95 Philippines 12781 C 37 37
96 Philippines 12782 A 37 37
97 Philippines 12783 A 37 37
98 Philippines 12784 C 37 37
99 Philippines 12785 A 37 37
100 Philippines 12786 C 37 37
101 Philippines 12787 A 37 37
102 Philippines 12788 A 37 37
103 Philippines 12789 C 37 37
104 Philippines 12790 A 37 37
105 Philippines 12791 A 37 37
106 Philippines 12792 A 37 37
107 Philippines 12793 G T 37 36 Lys4176Asn
108 Philippines 12794 G 37 37
109 Philippines 12795 G 37 37
110 Philippines 12796 A 37 37
111 Philippines 12797 G 37 37
112 Philippines 12798 G 37 37
113 Philippines 12799 T 37 37
114 Philippines 12800 A 37 37
115 Philippines 12801 G 37 37
116 Philippines 12802 G 37 37
117 Philippines 12803 T 37 37
118 Philippines 12804 T 37 37
119 Philippines 12805 T 37 37
120 Philippines 12806 G 37 37
121 Philippines 12807 T 37 37
122 Philippines 12808 A 37 37
123 Philippines 12809 C 37 37
124 Philippines 12810 T 37 37
125 Philippines 12811 T 37 37
126 Philippines 12812 G 37 37
127 Philippines 12813 C 37 37
128 Philippines 12814 A 37 37
129 Philippines 12815 C 37 37
130 Philippines 12816 T 37 37
131 Philippines 12817 G 37 37
132 Philippines 12818 T 37 37
133 Philippines 12819 T 37 37
134 Philippines 12820 A G 37 36 Leu4185Leu
135 Philippines 12821 T 37 37
136 Philippines 12822 C 37 37
137 Philippines 12823 C 37 37
138 Philippines 12824 G 37 37
139 Philippines 12825 A 37 37
140 Philippines 12826 T 37 37
141 Philippines 12827 T 37 37
142 Philippines 12828 T 37 37
143 Philippines 12829 A 37 37
144 Philippines 12830 C 37 37
145 Philippines 12831 A 37 37
146 Philippines 12832 G 37 37
147 Philippines 12833 G 37 37
148 Philippines 12834 A 37 37
149 Philippines 12835 T 37 37
150 Philippines 12836 T 37 37
151 Philippines 12837 T 37 37
152 Philippines 12838 G 37 37
153 Philippines 12839 A 37 37
154 Philippines 12840 A 37 37
155 Philippines 12841 A 37 37
156 Philippines 12842 T 37 37
157 Philippines 12843 G 37 37
158 Philippines 12844 G 37 37
159 Philippines 12845 G 37 37
160 Philippines 12846 C 37 37
161 Philippines 12847 T 37 37
162 Philippines 12848 A 37 37
163 Philippines 12849 G 37 37
164 Philippines 12850 A 37 37
165 Philippines 12851 T 37 37
166 Philippines 12852 T 37 37
167 Philippines 12853 C 37 37
168 Philippines 12854 C 37 37
169 Philippines 12855 C 37 37
170 Philippines 12856 T 37 37
171 Philippines 12857 A 37 37
172 Philippines 12858 A 37 37
173 Philippines 12859 G 37 37
174 Philippines 12860 A 37 37
175 Philippines 12861 G 37 37
176 Philippines 12862 T 37 37
177 Philippines 12863 G 37 37
178 Philippines 12864 A 37 37
179 Philippines 12865 T 37 37
180 Philippines 12866 G 37 37
181 Philippines 12867 G 37 37
182 Philippines 12868 A 37 37
183 Philippines 12869 A 37 37
184 Philippines 12870 C 37 37
185 Philippines 12871 T 37 37
186 Philippines 12872 G 37 37
187 Philippines 12873 G 37 37
188 Philippines 12874 T 37 37
189 Philippines 12875 A 37 37
190 Philippines 12876 C 37 37
191 Philippines 12877 T 37 37
192 Philippines 12878 A 37 37
193 Philippines 12879 T 37 37
194 Philippines 12880 C 37 37
195 Philippines 12881 T 37 37
196 Philippines 12882 A 37 37
197 Philippines 12883 T 37 37
198 Philippines 12884 A 37 37
199 Philippines 12885 C 37 37
200 Philippines 12886 A 37 37
201 Philippines 12887 G 37 37
202 Philippines 12888 A 37 37
203 Philippines 12889 A 37 37
204 Philippines 12890 C 37 37
205 Philippines 12891 T 37 37
206 Philippines 12892 G 37 37
207 Philippines 12893 G 37 37
208 Philippines 12894 A 37 37
209 Philippines 12895 A 37 37
210 Philippines 12896 C 37 37
211 Philippines 12897 C 37 37
212 Philippines 12898 A 37 37
213 Philippines 12899 C 37 37
214 Philippines 12900 C 37 37
215 Philippines 12901 T 37 37
216 Philippines 12902 T 37 37
217 Philippines 12903 G 37 37
218 Philippines 12904 T 37 37
219 Philippines 12905 A 37 37
220 Philippines 12906 G 37 37
221 Philippines 12907 G 37 37
222 Philippines 12908 T 37 37
223 Philippines 12909 T 37 37
224 Philippines 12910 T 37 37
225 Philippines 12911 G 37 37
226 Philippines 12912 T 37 37
227 Philippines 12913 T 37 37
228 Philippines 12914 A 37 37
229 Philippines 12915 C 37 37
230 Philippines 12916 A 37 37
231 Philippines 12917 G 37 37
232 Philippines 12918 A 37 37
233 Philippines 12919 C 37 37
234 Philippines 12920 A 37 37
235 Philippines 12921 C 37 37
236 Philippines 12922 A 37 37
237 Philippines 12923 C 37 37
238 Philippines 12924 C 37 37
239 Philippines 12925 T 37 37
240 Philippines 12926 A 37 37
241 Philippines 12927 A 37 37
242 Philippines 12928 A 37 37
243 Philippines 12929 G 37 37
244 Philippines 12930 G 37 37
245 Philippines 12931 T 37 37
246 Philippines 12932 C 37 37
247 Philippines 12933 C 37 37
248 Philippines 12934 T 37 37
249 Philippines 12935 A 37 37
250 Philippines 12936 A 37 37
251 Philippines 12937 A 37 37
252 Philippines 12938 G 37 37
253 Philippines 12939 T 37 37
254 Philippines 12940 G 37 37
255 Philippines 12941 A 37 37
256 Philippines 12942 A 37 37
257 Philippines 12943 G 37 37
258 Philippines 12944 T 37 37
259 Philippines 12945 A 37 37
260 Philippines 12946 T 37 37
261 Philippines 12947 T 37 37
262 Philippines 12948 T 37 37
263 Philippines 12949 A 37 37
264 Philippines 12950 T 37 37
265 Philippines 12951 A 37 37
266 Philippines 12952 C 37 37
267 Philippines 12953 T 37 37
268 Philippines 12954 T 37 37
269 Philippines 12955 T 37 37
270 Philippines 12956 A 37 37
271 Philippines 12957 T 37 37
272 Philippines 12958 T 37 37
273 Philippines 12959 A 37 37
274 Philippines 12960 A 37 37
275 Philippines 12961 A 37 37
276 Philippines 12962 G 37 37
277 Philippines 12963 G 37 37
278 Philippines 12964 A 37 37
279 Philippines 12965 T 37 37
280 Philippines 12966 T 37 37
281 Philippines 12967 A 37 37
282 Philippines 12968 A 37 37
283 Philippines 12969 A 37 37
284 Philippines 12970 C 37 37
285 Philippines 12971 A 37 37
286 Philippines 12972 A 37 37
287 Philippines 12973 C 37 37
288 Philippines 12974 C 37 37
289 Philippines 12975 T 37 37
290 Philippines 12976 A 37 37
291 Philippines 12977 A 37 37
292 Philippines 12978 A 37 37
293 Philippines 12979 T 37 37
294 Philippines 12980 A 37 37
295 Philippines 12981 G 37 37
296 Philippines 12982 A 37 37
297 Philippines 12983 G 37 37
298 Philippines 12984 G 37 37
299 Philippines 12985 T 37 37
300 Philippines 12986 A 37 37
301 Philippines 12987 T 37 37
302 Philippines 12988 G 37 37
303 Philippines 12989 G 37 37
304 Philippines 12990 T 37 37
305 Philippines 12991 A 37 37
306 Philippines 12992 C 37 37
307 Philippines 12993 T 37 37
308 Philippines 12994 T 37 37
309 Philippines 12995 G 37 37
310 Philippines 12996 G 37 37
311 Philippines 12997 T 37 37
312 Philippines 12998 A 37 37
313 Philippines 12999 G 37 37
314 Philippines 13000 T 37 37
315 Philippines 13001 T 37 37
316 Philippines 13002 T 37 37
317 Philippines 13003 A 37 37
318 Philippines 13004 G 37 37
319 Philippines 13005 C 37 37
320 Philippines 13006 T 37 37
321 Philippines 13007 G 37 37
322 Philippines 13008 C 37 37
323 Philippines 13009 C 37 37
324 Philippines 13010 A 37 37
325 Philippines 13011 C 37 37
326 Philippines 13012 A 37 37
327 Philippines 13013 G 37 37
328 Philippines 13014 T 37 37
329 Philippines 13015 A 37 37
330 Philippines 13016 C 37 37
331 Philippines 13017 G 37 37
332 Philippines 13018 T 37 37
333 Philippines 13019 C 37 37
334 Philippines 13020 T 37 37
335 Philippines 13021 A 37 37
336 Philippines 13022 C 37 37
337 Philippines 13023 A 37 37
338 Philippines 13024 A 37 37