National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
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Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G I K L M N P Q R S T V W Y
-   339                                      
?                                          
A   30                                      
C   9   1                                  
D   18                                      
E   9                                      
F   12                                      
G   27                                      
I   6                                      
K   21                                      
L   45                                      
M   6                                      
N   21                                      
P   18                                      
Q   12                         1            
R   18                                      
S   15                                      
T   36                                      
V   18                                      
W   3                                      
Y   15                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 North_Macedonia 12686 A 82 82
1 North_Macedonia 12687 A 82 82
2 North_Macedonia 12688 T 82 82
3 North_Macedonia 12689 A 82 82
4 North_Macedonia 12690 A 82 82
5 North_Macedonia 12691 T 82 82
6 North_Macedonia 12692 G 82 82
7 North_Macedonia 12693 A 82 82
8 North_Macedonia 12694 G 82 82
9 North_Macedonia 12695 C 82 82
10 North_Macedonia 12696 T 82 82
11 North_Macedonia 12697 T 82 82
12 North_Macedonia 12698 A 82 82
13 North_Macedonia 12699 G 82 82
14 North_Macedonia 12700 T 82 82
15 North_Macedonia 12701 C 82 82
16 North_Macedonia 12702 C 82 82
17 North_Macedonia 12703 T 82 82
18 North_Macedonia 12704 G 82 82
19 North_Macedonia 12705 T 82 82
20 North_Macedonia 12706 T 82 82
21 North_Macedonia 12707 G 82 82
22 North_Macedonia 12708 C 82 82
23 North_Macedonia 12709 A 82 82
24 North_Macedonia 12710 C 82 82
25 North_Macedonia 12711 T 82 82
26 North_Macedonia 12712 A 82 82
27 North_Macedonia 12713 C 82 82
28 North_Macedonia 12714 G 82 82
29 North_Macedonia 12715 A 82 82
30 North_Macedonia 12716 C 82 82
31 North_Macedonia 12717 A 82 82
32 North_Macedonia 12718 G A 82 81 Gln4151Gln
33 North_Macedonia 12719 A 82 82
34 North_Macedonia 12720 T 82 82
35 North_Macedonia 12721 G 82 82
36 North_Macedonia 12722 T 82 82
37 North_Macedonia 12723 C 82 82
38 North_Macedonia 12724 T 82 82
39 North_Macedonia 12725 T 82 82
40 North_Macedonia 12726 G 82 82
41 North_Macedonia 12727 T 82 82
42 North_Macedonia 12728 G 82 82
43 North_Macedonia 12729 C 82 82
44 North_Macedonia 12730 T 82 82
45 North_Macedonia 12731 G 82 82
46 North_Macedonia 12732 C 82 82
47 North_Macedonia 12733 C 82 82
48 North_Macedonia 12734 G 82 82
49 North_Macedonia 12735 G 82 82
50 North_Macedonia 12736 T 82 82
51 North_Macedonia 12737 A 82 82
52 North_Macedonia 12738 C 82 82
53 North_Macedonia 12739 T 82 82
54 North_Macedonia 12740 A 82 82
55 North_Macedonia 12741 C 82 82
56 North_Macedonia 12742 A 82 82
57 North_Macedonia 12743 C 82 82
58 North_Macedonia 12744 A 82 82
59 North_Macedonia 12745 A 82 82
60 North_Macedonia 12746 A 82 82
61 North_Macedonia 12747 C 82 82
62 North_Macedonia 12748 T 82 82
63 North_Macedonia 12749 G 82 82
64 North_Macedonia 12750 C 82 82
65 North_Macedonia 12751 T 82 82
66 North_Macedonia 12752 T 82 82
67 North_Macedonia 12753 G 82 82
68 North_Macedonia 12754 C T 82 74 Cys4163Cys
69 North_Macedonia 12755 A 82 82
70 North_Macedonia 12756 C 82 82
71 North_Macedonia 12757 T 82 82
72 North_Macedonia 12758 G 82 82
73 North_Macedonia 12759 A 82 82
74 North_Macedonia 12760 T 82 82
75 North_Macedonia 12761 G 82 82
76 North_Macedonia 12762 A 82 82
77 North_Macedonia 12763 C 82 82
78 North_Macedonia 12764 A 82 82
79 North_Macedonia 12765 A 82 82
80 North_Macedonia 12766 T 82 82
81 North_Macedonia 12767 G 82 82
82 North_Macedonia 12768 C 82 82
83 North_Macedonia 12769 G 82 82
84 North_Macedonia 12770 T 82 82
85 North_Macedonia 12771 T 82 82
86 North_Macedonia 12772 A 82 82
87 North_Macedonia 12773 G 82 82
88 North_Macedonia 12774 C 82 82
89 North_Macedonia 12775 T 82 82
90 North_Macedonia 12776 T 82 82
91 North_Macedonia 12777 A 82 82
92 North_Macedonia 12778 C 82 82
93 North_Macedonia 12779 T 82 82
94 North_Macedonia 12780 A 82 82
95 North_Macedonia 12781 C 82 82
96 North_Macedonia 12782 A 82 82
97 North_Macedonia 12783 A 82 82
98 North_Macedonia 12784 C 82 82
99 North_Macedonia 12785 A 82 82
100 North_Macedonia 12786 C 82 82
101 North_Macedonia 12787 A 82 82
102 North_Macedonia 12788 A 82 82
103 North_Macedonia 12789 C 82 82
104 North_Macedonia 12790 A 82 82
105 North_Macedonia 12791 A 82 82
106 North_Macedonia 12792 A 82 82
107 North_Macedonia 12793 G 82 82
108 North_Macedonia 12794 G 82 82
109 North_Macedonia 12795 G 82 82
110 North_Macedonia 12796 A 82 82
111 North_Macedonia 12797 G 82 82
112 North_Macedonia 12798 G 82 82
113 North_Macedonia 12799 T 82 82
114 North_Macedonia 12800 A 82 82
115 North_Macedonia 12801 G 82 82
116 North_Macedonia 12802 G 82 82
117 North_Macedonia 12803 T 82 82
118 North_Macedonia 12804 T 82 82
119 North_Macedonia 12805 T 82 82
120 North_Macedonia 12806 G 82 82
121 North_Macedonia 12807 T 82 82
122 North_Macedonia 12808 A 82 82
123 North_Macedonia 12809 C 82 82
124 North_Macedonia 12810 T 82 82
125 North_Macedonia 12811 T 82 82
126 North_Macedonia 12812 G 82 82
127 North_Macedonia 12813 C 82 82
128 North_Macedonia 12814 A 82 82
129 North_Macedonia 12815 C 82 82
130 North_Macedonia 12816 T 82 82
131 North_Macedonia 12817 G 82 82
132 North_Macedonia 12818 T 82 82
133 North_Macedonia 12819 T 82 82
134 North_Macedonia 12820 A 82 82
135 North_Macedonia 12821 T 82 82
136 North_Macedonia 12822 C 82 82
137 North_Macedonia 12823 C 82 82
138 North_Macedonia 12824 G 82 82
139 North_Macedonia 12825 A 82 82
140 North_Macedonia 12826 T 82 82
141 North_Macedonia 12827 T 82 82
142 North_Macedonia 12828 T 82 82
143 North_Macedonia 12829 A 82 82
144 North_Macedonia 12830 C 82 82
145 North_Macedonia 12831 A 82 82
146 North_Macedonia 12832 G 82 82
147 North_Macedonia 12833 G 82 82
148 North_Macedonia 12834 A 82 82
149 North_Macedonia 12835 T 82 82
150 North_Macedonia 12836 T 82 82
151 North_Macedonia 12837 T 82 82
152 North_Macedonia 12838 G 82 82
153 North_Macedonia 12839 A 82 82
154 North_Macedonia 12840 A 82 82
155 North_Macedonia 12841 A 82 82
156 North_Macedonia 12842 T 82 82
157 North_Macedonia 12843 G 82 82
158 North_Macedonia 12844 G 82 82
159 North_Macedonia 12845 G 82 82
160 North_Macedonia 12846 C 82 82
161 North_Macedonia 12847 T 82 82
162 North_Macedonia 12848 A 82 82
163 North_Macedonia 12849 G 82 82
164 North_Macedonia 12850 A 82 82
165 North_Macedonia 12851 T 82 82
166 North_Macedonia 12852 T 82 82
167 North_Macedonia 12853 C 82 82
168 North_Macedonia 12854 C 82 82
169 North_Macedonia 12855 C 82 82
170 North_Macedonia 12856 T 82 82
171 North_Macedonia 12857 A 82 82
172 North_Macedonia 12858 A 82 82
173 North_Macedonia 12859 G 82 82
174 North_Macedonia 12860 A 82 82
175 North_Macedonia 12861 G 82 82
176 North_Macedonia 12862 T 82 82
177 North_Macedonia 12863 G 82 82
178 North_Macedonia 12864 A 82 82
179 North_Macedonia 12865 T 82 82
180 North_Macedonia 12866 G 82 82
181 North_Macedonia 12867 G 82 82
182 North_Macedonia 12868 A 82 82
183 North_Macedonia 12869 A 82 82
184 North_Macedonia 12870 C 82 82
185 North_Macedonia 12871 T 82 82
186 North_Macedonia 12872 G 82 82
187 North_Macedonia 12873 G 82 82
188 North_Macedonia 12874 T 82 82
189 North_Macedonia 12875 A 82 82
190 North_Macedonia 12876 C 82 82
191 North_Macedonia 12877 T 82 82
192 North_Macedonia 12878 A 82 82
193 North_Macedonia 12879 T 82 82
194 North_Macedonia 12880 C 82 82
195 North_Macedonia 12881 T 82 82
196 North_Macedonia 12882 A 82 82
197 North_Macedonia 12883 T 82 82
198 North_Macedonia 12884 A 82 82
199 North_Macedonia 12885 C 82 82
200 North_Macedonia 12886 A 82 82
201 North_Macedonia 12887 G 82 82
202 North_Macedonia 12888 A 82 82
203 North_Macedonia 12889 A 82 82
204 North_Macedonia 12890 C 82 82
205 North_Macedonia 12891 T 82 82
206 North_Macedonia 12892 G 82 82
207 North_Macedonia 12893 G 82 82
208 North_Macedonia 12894 A 82 82
209 North_Macedonia 12895 A 82 82
210 North_Macedonia 12896 C 82 82
211 North_Macedonia 12897 C 82 82
212 North_Macedonia 12898 A 82 82
213 North_Macedonia 12899 C 82 82
214 North_Macedonia 12900 C 82 82
215 North_Macedonia 12901 T 82 82
216 North_Macedonia 12902 T 82 82
217 North_Macedonia 12903 G 82 82
218 North_Macedonia 12904 T 82 82
219 North_Macedonia 12905 A 82 82
220 North_Macedonia 12906 G 82 82
221 North_Macedonia 12907 G 82 82
222 North_Macedonia 12908 T 82 82
223 North_Macedonia 12909 T 82 82
224 North_Macedonia 12910 T 82 82
225 North_Macedonia 12911 G 82 82
226 North_Macedonia 12912 T 82 82
227 North_Macedonia 12913 T 82 82
228 North_Macedonia 12914 A 82 82
229 North_Macedonia 12915 C 82 82
230 North_Macedonia 12916 A 82 82
231 North_Macedonia 12917 G 82 82
232 North_Macedonia 12918 A 82 82
233 North_Macedonia 12919 C 82 82
234 North_Macedonia 12920 A 82 82
235 North_Macedonia 12921 C 82 82
236 North_Macedonia 12922 A 82 82
237 North_Macedonia 12923 C 82 82
238 North_Macedonia 12924 C 82 82
239 North_Macedonia 12925 T 82 82
240 North_Macedonia 12926 A 82 82
241 North_Macedonia 12927 A 82 82
242 North_Macedonia 12928 A 82 82
243 North_Macedonia 12929 G 82 82
244 North_Macedonia 12930 G 82 82
245 North_Macedonia 12931 T 82 82
246 North_Macedonia 12932 C 82 82
247 North_Macedonia 12933 C 82 82
248 North_Macedonia 12934 T 82 82
249 North_Macedonia 12935 A 82 82
250 North_Macedonia 12936 A 82 82
251 North_Macedonia 12937 A 82 82
252 North_Macedonia 12938 G 82 82
253 North_Macedonia 12939 T 82 82
254 North_Macedonia 12940 G 82 82
255 North_Macedonia 12941 A 82 82
256 North_Macedonia 12942 A 82 82
257 North_Macedonia 12943 G 82 82
258 North_Macedonia 12944 T 82 82
259 North_Macedonia 12945 A 82 82
260 North_Macedonia 12946 T 82 82
261 North_Macedonia 12947 T 82 82
262 North_Macedonia 12948 T 82 82
263 North_Macedonia 12949 A 82 82
264 North_Macedonia 12950 T 82 82
265 North_Macedonia 12951 A 82 82
266 North_Macedonia 12952 C 82 82
267 North_Macedonia 12953 T 82 82
268 North_Macedonia 12954 T 82 82
269 North_Macedonia 12955 T 82 82
270 North_Macedonia 12956 A 82 82
271 North_Macedonia 12957 T 82 82
272 North_Macedonia 12958 T 82 82
273 North_Macedonia 12959 A 82 82
274 North_Macedonia 12960 A 82 82
275 North_Macedonia 12961 A 82 82
276 North_Macedonia 12962 G 82 82
277 North_Macedonia 12963 G 82 82
278 North_Macedonia 12964 A 82 82
279 North_Macedonia 12965 T 82 82
280 North_Macedonia 12966 T 82 82
281 North_Macedonia 12967 A 82 82
282 North_Macedonia 12968 A 82 82
283 North_Macedonia 12969 A 82 82
284 North_Macedonia 12970 C 82 82
285 North_Macedonia 12971 A 82 82
286 North_Macedonia 12972 A 82 82
287 North_Macedonia 12973 C 82 82
288 North_Macedonia 12974 C 82 82
289 North_Macedonia 12975 T 82 82
290 North_Macedonia 12976 A 82 82
291 North_Macedonia 12977 A 82 82
292 North_Macedonia 12978 A 82 82
293 North_Macedonia 12979 T 82 82
294 North_Macedonia 12980 A 82 82
295 North_Macedonia 12981 G 82 82
296 North_Macedonia 12982 A 82 82
297 North_Macedonia 12983 G 82 82
298 North_Macedonia 12984 G 82 82
299 North_Macedonia 12985 T 82 82
300 North_Macedonia 12986 A 82 82
301 North_Macedonia 12987 T 82 82
302 North_Macedonia 12988 G 82 82
303 North_Macedonia 12989 G 82 82
304 North_Macedonia 12990 T 82 82
305 North_Macedonia 12991 A 82 82
306 North_Macedonia 12992 C 82 82
307 North_Macedonia 12993 T 82 82
308 North_Macedonia 12994 T 82 82
309 North_Macedonia 12995 G 82 82
310 North_Macedonia 12996 G 82 82
311 North_Macedonia 12997 T 82 82
312 North_Macedonia 12998 A 82 82
313 North_Macedonia 12999 G 82 82
314 North_Macedonia 13000 T 82 82
315 North_Macedonia 13001 T 82 82
316 North_Macedonia 13002 T 82 82
317 North_Macedonia 13003 A 82 82
318 North_Macedonia 13004 G 82 82
319 North_Macedonia 13005 C 82 82
320 North_Macedonia 13006 T 82 82
321 North_Macedonia 13007 G 82 82
322 North_Macedonia 13008 C 82 82
323 North_Macedonia 13009 C 82 82
324 North_Macedonia 13010 A 82 82
325 North_Macedonia 13011 C 82 82
326 North_Macedonia 13012 A 82 82
327 North_Macedonia 13013 G 82 82
328 North_Macedonia 13014 T 82 82
329 North_Macedonia 13015 A 82 82
330 North_Macedonia 13016 C 82 82
331 North_Macedonia 13017 G 82 82
332 North_Macedonia 13018 T 82 82
333 North_Macedonia 13019 C 82 82
334 North_Macedonia 13020 T 82 82
335 North_Macedonia 13021 A 82 82
336 North_Macedonia 13022 C 82 82
337 North_Macedonia 13023 A 82 82
338 North_Macedonia 13024 A 82 82