National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G I K L M N P Q R S T V W Y
-   339                                      
?                                          
A   30                                      
C   9                                      
D   18                                      
E   9                                      
F   12                                      
G   27                                      
I   6                                      
K   21                                      
L   45                                      
M   6             1                        
N   21                                      
P   18                                      
Q   12                                      
R   18                                      
S   15                                      
T   36                                      
V   18                                      
W   3                                      
Y   15                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Bosnia_and_Herzegovina 12686 A 33 33
1 Bosnia_and_Herzegovina 12687 A 33 33
2 Bosnia_and_Herzegovina 12688 T 33 33
3 Bosnia_and_Herzegovina 12689 A 33 33
4 Bosnia_and_Herzegovina 12690 A 33 33
5 Bosnia_and_Herzegovina 12691 T 33 33
6 Bosnia_and_Herzegovina 12692 G 33 33
7 Bosnia_and_Herzegovina 12693 A 33 33
8 Bosnia_and_Herzegovina 12694 G 33 33
9 Bosnia_and_Herzegovina 12695 C 33 33
10 Bosnia_and_Herzegovina 12696 T 33 33
11 Bosnia_and_Herzegovina 12697 T 33 33
12 Bosnia_and_Herzegovina 12698 A 33 33
13 Bosnia_and_Herzegovina 12699 G 33 33
14 Bosnia_and_Herzegovina 12700 T 33 33
15 Bosnia_and_Herzegovina 12701 C 33 33
16 Bosnia_and_Herzegovina 12702 C 33 33
17 Bosnia_and_Herzegovina 12703 T 33 33
18 Bosnia_and_Herzegovina 12704 G 33 33
19 Bosnia_and_Herzegovina 12705 T 33 33
20 Bosnia_and_Herzegovina 12706 T 33 33
21 Bosnia_and_Herzegovina 12707 G 33 33
22 Bosnia_and_Herzegovina 12708 C 33 33
23 Bosnia_and_Herzegovina 12709 A 33 33
24 Bosnia_and_Herzegovina 12710 C 33 33
25 Bosnia_and_Herzegovina 12711 T 33 33
26 Bosnia_and_Herzegovina 12712 A 33 33
27 Bosnia_and_Herzegovina 12713 C 33 33
28 Bosnia_and_Herzegovina 12714 G 33 33
29 Bosnia_and_Herzegovina 12715 A 33 33
30 Bosnia_and_Herzegovina 12716 C 33 33
31 Bosnia_and_Herzegovina 12717 A 33 33
32 Bosnia_and_Herzegovina 12718 G 33 33
33 Bosnia_and_Herzegovina 12719 A 33 33
34 Bosnia_and_Herzegovina 12720 T 33 33
35 Bosnia_and_Herzegovina 12721 G 33 33
36 Bosnia_and_Herzegovina 12722 T 33 33
37 Bosnia_and_Herzegovina 12723 C 33 33
38 Bosnia_and_Herzegovina 12724 T 33 33
39 Bosnia_and_Herzegovina 12725 T 33 33
40 Bosnia_and_Herzegovina 12726 G 33 33
41 Bosnia_and_Herzegovina 12727 T 33 33
42 Bosnia_and_Herzegovina 12728 G 33 33
43 Bosnia_and_Herzegovina 12729 C 33 33
44 Bosnia_and_Herzegovina 12730 T 33 33
45 Bosnia_and_Herzegovina 12731 G 33 33
46 Bosnia_and_Herzegovina 12732 C 33 33
47 Bosnia_and_Herzegovina 12733 C 33 33
48 Bosnia_and_Herzegovina 12734 G 33 33
49 Bosnia_and_Herzegovina 12735 G 33 33
50 Bosnia_and_Herzegovina 12736 T 33 33
51 Bosnia_and_Herzegovina 12737 A 33 33
52 Bosnia_and_Herzegovina 12738 C 33 33
53 Bosnia_and_Herzegovina 12739 T 33 33
54 Bosnia_and_Herzegovina 12740 A 33 33
55 Bosnia_and_Herzegovina 12741 C 33 33
56 Bosnia_and_Herzegovina 12742 A 33 33
57 Bosnia_and_Herzegovina 12743 C 33 33
58 Bosnia_and_Herzegovina 12744 A 33 33
59 Bosnia_and_Herzegovina 12745 A 33 33
60 Bosnia_and_Herzegovina 12746 A 33 33
61 Bosnia_and_Herzegovina 12747 C 33 33
62 Bosnia_and_Herzegovina 12748 T 33 33
63 Bosnia_and_Herzegovina 12749 G 33 33
64 Bosnia_and_Herzegovina 12750 C 33 33
65 Bosnia_and_Herzegovina 12751 T 33 33
66 Bosnia_and_Herzegovina 12752 T 33 33
67 Bosnia_and_Herzegovina 12753 G 33 33
68 Bosnia_and_Herzegovina 12754 C 33 33
69 Bosnia_and_Herzegovina 12755 A 33 33
70 Bosnia_and_Herzegovina 12756 C 33 33
71 Bosnia_and_Herzegovina 12757 T 33 33
72 Bosnia_and_Herzegovina 12758 G 33 33
73 Bosnia_and_Herzegovina 12759 A 33 33
74 Bosnia_and_Herzegovina 12760 T 33 33
75 Bosnia_and_Herzegovina 12761 G 33 33
76 Bosnia_and_Herzegovina 12762 A 33 33
77 Bosnia_and_Herzegovina 12763 C 33 33
78 Bosnia_and_Herzegovina 12764 A 33 33
79 Bosnia_and_Herzegovina 12765 A 33 33
80 Bosnia_and_Herzegovina 12766 T 33 33
81 Bosnia_and_Herzegovina 12767 G 33 33
82 Bosnia_and_Herzegovina 12768 C 33 33
83 Bosnia_and_Herzegovina 12769 G 33 33
84 Bosnia_and_Herzegovina 12770 T 33 33
85 Bosnia_and_Herzegovina 12771 T 33 33
86 Bosnia_and_Herzegovina 12772 A 33 33
87 Bosnia_and_Herzegovina 12773 G 33 33
88 Bosnia_and_Herzegovina 12774 C 33 33
89 Bosnia_and_Herzegovina 12775 T 33 33
90 Bosnia_and_Herzegovina 12776 T 33 33
91 Bosnia_and_Herzegovina 12777 A 33 33
92 Bosnia_and_Herzegovina 12778 C 33 33
93 Bosnia_and_Herzegovina 12779 T 33 33
94 Bosnia_and_Herzegovina 12780 A 33 33
95 Bosnia_and_Herzegovina 12781 C 33 33
96 Bosnia_and_Herzegovina 12782 A 33 33
97 Bosnia_and_Herzegovina 12783 A 33 33
98 Bosnia_and_Herzegovina 12784 C 33 33
99 Bosnia_and_Herzegovina 12785 A 33 33
100 Bosnia_and_Herzegovina 12786 C 33 33
101 Bosnia_and_Herzegovina 12787 A 33 33
102 Bosnia_and_Herzegovina 12788 A 33 33
103 Bosnia_and_Herzegovina 12789 C 33 33
104 Bosnia_and_Herzegovina 12790 A 33 33
105 Bosnia_and_Herzegovina 12791 A 33 33
106 Bosnia_and_Herzegovina 12792 A 33 33
107 Bosnia_and_Herzegovina 12793 G 33 33
108 Bosnia_and_Herzegovina 12794 G 33 33
109 Bosnia_and_Herzegovina 12795 G 33 33
110 Bosnia_and_Herzegovina 12796 A 33 33
111 Bosnia_and_Herzegovina 12797 G 33 33
112 Bosnia_and_Herzegovina 12798 G 33 33
113 Bosnia_and_Herzegovina 12799 T 33 33
114 Bosnia_and_Herzegovina 12800 A 33 33
115 Bosnia_and_Herzegovina 12801 G 33 33
116 Bosnia_and_Herzegovina 12802 G 33 33
117 Bosnia_and_Herzegovina 12803 T 33 33
118 Bosnia_and_Herzegovina 12804 T 33 33
119 Bosnia_and_Herzegovina 12805 T 33 33
120 Bosnia_and_Herzegovina 12806 G 33 33
121 Bosnia_and_Herzegovina 12807 T 33 33
122 Bosnia_and_Herzegovina 12808 A 33 33
123 Bosnia_and_Herzegovina 12809 C 33 33
124 Bosnia_and_Herzegovina 12810 T 33 33
125 Bosnia_and_Herzegovina 12811 T 33 33
126 Bosnia_and_Herzegovina 12812 G 33 33
127 Bosnia_and_Herzegovina 12813 C 33 33
128 Bosnia_and_Herzegovina 12814 A 33 33
129 Bosnia_and_Herzegovina 12815 C 33 33
130 Bosnia_and_Herzegovina 12816 T 33 33
131 Bosnia_and_Herzegovina 12817 G 33 33
132 Bosnia_and_Herzegovina 12818 T 33 33
133 Bosnia_and_Herzegovina 12819 T 33 33
134 Bosnia_and_Herzegovina 12820 A 33 33
135 Bosnia_and_Herzegovina 12821 T 33 33
136 Bosnia_and_Herzegovina 12822 C 33 33
137 Bosnia_and_Herzegovina 12823 C 33 33
138 Bosnia_and_Herzegovina 12824 G 33 33
139 Bosnia_and_Herzegovina 12825 A 33 33
140 Bosnia_and_Herzegovina 12826 T 33 33
141 Bosnia_and_Herzegovina 12827 T 33 33
142 Bosnia_and_Herzegovina 12828 T 33 33
143 Bosnia_and_Herzegovina 12829 A 33 33
144 Bosnia_and_Herzegovina 12830 C 33 33
145 Bosnia_and_Herzegovina 12831 A 33 33
146 Bosnia_and_Herzegovina 12832 G 33 33
147 Bosnia_and_Herzegovina 12833 G 33 33
148 Bosnia_and_Herzegovina 12834 A 33 33
149 Bosnia_and_Herzegovina 12835 T 33 33
150 Bosnia_and_Herzegovina 12836 T 33 33
151 Bosnia_and_Herzegovina 12837 T 33 33
152 Bosnia_and_Herzegovina 12838 G 33 33
153 Bosnia_and_Herzegovina 12839 A 33 33
154 Bosnia_and_Herzegovina 12840 A 33 33
155 Bosnia_and_Herzegovina 12841 A 33 33
156 Bosnia_and_Herzegovina 12842 T 33 33
157 Bosnia_and_Herzegovina 12843 G 33 33
158 Bosnia_and_Herzegovina 12844 G 33 33
159 Bosnia_and_Herzegovina 12845 G 33 33
160 Bosnia_and_Herzegovina 12846 C 33 33
161 Bosnia_and_Herzegovina 12847 T 33 33
162 Bosnia_and_Herzegovina 12848 A 33 33
163 Bosnia_and_Herzegovina 12849 G 33 33
164 Bosnia_and_Herzegovina 12850 A 33 33
165 Bosnia_and_Herzegovina 12851 T 33 33
166 Bosnia_and_Herzegovina 12852 T 33 33
167 Bosnia_and_Herzegovina 12853 C 33 33
168 Bosnia_and_Herzegovina 12854 C 33 33
169 Bosnia_and_Herzegovina 12855 C 33 33
170 Bosnia_and_Herzegovina 12856 T 33 33
171 Bosnia_and_Herzegovina 12857 A 33 33
172 Bosnia_and_Herzegovina 12858 A 33 33
173 Bosnia_and_Herzegovina 12859 G 33 33
174 Bosnia_and_Herzegovina 12860 A 33 33
175 Bosnia_and_Herzegovina 12861 G 33 33
176 Bosnia_and_Herzegovina 12862 T 33 33
177 Bosnia_and_Herzegovina 12863 G 33 33
178 Bosnia_and_Herzegovina 12864 A 33 33
179 Bosnia_and_Herzegovina 12865 T 33 33
180 Bosnia_and_Herzegovina 12866 G 33 33
181 Bosnia_and_Herzegovina 12867 G 33 33
182 Bosnia_and_Herzegovina 12868 A 33 33
183 Bosnia_and_Herzegovina 12869 A 33 33
184 Bosnia_and_Herzegovina 12870 C 33 33
185 Bosnia_and_Herzegovina 12871 T 33 33
186 Bosnia_and_Herzegovina 12872 G 33 33
187 Bosnia_and_Herzegovina 12873 G 33 33
188 Bosnia_and_Herzegovina 12874 T 33 33
189 Bosnia_and_Herzegovina 12875 A 33 33
190 Bosnia_and_Herzegovina 12876 C 33 33
191 Bosnia_and_Herzegovina 12877 T 33 33
192 Bosnia_and_Herzegovina 12878 A 33 33
193 Bosnia_and_Herzegovina 12879 T 33 33
194 Bosnia_and_Herzegovina 12880 C 33 33
195 Bosnia_and_Herzegovina 12881 T 33 33
196 Bosnia_and_Herzegovina 12882 A 33 33
197 Bosnia_and_Herzegovina 12883 T 33 33
198 Bosnia_and_Herzegovina 12884 A 33 33
199 Bosnia_and_Herzegovina 12885 C 33 33
200 Bosnia_and_Herzegovina 12886 A 33 33
201 Bosnia_and_Herzegovina 12887 G 33 33
202 Bosnia_and_Herzegovina 12888 A 33 33
203 Bosnia_and_Herzegovina 12889 A 33 33
204 Bosnia_and_Herzegovina 12890 C 33 33
205 Bosnia_and_Herzegovina 12891 T 33 33
206 Bosnia_and_Herzegovina 12892 G 33 33
207 Bosnia_and_Herzegovina 12893 G 33 33
208 Bosnia_and_Herzegovina 12894 A 33 33
209 Bosnia_and_Herzegovina 12895 A 33 33
210 Bosnia_and_Herzegovina 12896 C 33 33
211 Bosnia_and_Herzegovina 12897 C 33 33
212 Bosnia_and_Herzegovina 12898 A 33 33
213 Bosnia_and_Herzegovina 12899 C 33 33
214 Bosnia_and_Herzegovina 12900 C 33 33
215 Bosnia_and_Herzegovina 12901 T 33 33
216 Bosnia_and_Herzegovina 12902 T 33 33
217 Bosnia_and_Herzegovina 12903 G 33 33
218 Bosnia_and_Herzegovina 12904 T 33 33
219 Bosnia_and_Herzegovina 12905 A 33 33
220 Bosnia_and_Herzegovina 12906 G 33 33
221 Bosnia_and_Herzegovina 12907 G 33 33
222 Bosnia_and_Herzegovina 12908 T 33 33
223 Bosnia_and_Herzegovina 12909 T 33 33
224 Bosnia_and_Herzegovina 12910 T 33 33
225 Bosnia_and_Herzegovina 12911 G 33 33
226 Bosnia_and_Herzegovina 12912 T 33 33
227 Bosnia_and_Herzegovina 12913 T 33 33
228 Bosnia_and_Herzegovina 12914 A 33 33
229 Bosnia_and_Herzegovina 12915 C 33 33
230 Bosnia_and_Herzegovina 12916 A 33 33
231 Bosnia_and_Herzegovina 12917 G 33 33
232 Bosnia_and_Herzegovina 12918 A 33 33
233 Bosnia_and_Herzegovina 12919 C 33 33
234 Bosnia_and_Herzegovina 12920 A 33 33
235 Bosnia_and_Herzegovina 12921 C 33 33
236 Bosnia_and_Herzegovina 12922 A 33 33
237 Bosnia_and_Herzegovina 12923 C 33 33
238 Bosnia_and_Herzegovina 12924 C 33 33
239 Bosnia_and_Herzegovina 12925 T 33 33
240 Bosnia_and_Herzegovina 12926 A 33 33
241 Bosnia_and_Herzegovina 12927 A 33 33
242 Bosnia_and_Herzegovina 12928 A 33 33
243 Bosnia_and_Herzegovina 12929 G 33 33
244 Bosnia_and_Herzegovina 12930 G 33 33
245 Bosnia_and_Herzegovina 12931 T 33 33
246 Bosnia_and_Herzegovina 12932 C 33 33
247 Bosnia_and_Herzegovina 12933 C 33 33
248 Bosnia_and_Herzegovina 12934 T 33 33
249 Bosnia_and_Herzegovina 12935 A 33 33
250 Bosnia_and_Herzegovina 12936 A 33 33
251 Bosnia_and_Herzegovina 12937 A 33 33
252 Bosnia_and_Herzegovina 12938 G 33 33
253 Bosnia_and_Herzegovina 12939 T 33 33
254 Bosnia_and_Herzegovina 12940 G 33 33
255 Bosnia_and_Herzegovina 12941 A 33 33
256 Bosnia_and_Herzegovina 12942 A 33 33
257 Bosnia_and_Herzegovina 12943 G 33 33
258 Bosnia_and_Herzegovina 12944 T 33 33
259 Bosnia_and_Herzegovina 12945 A 33 33
260 Bosnia_and_Herzegovina 12946 T 33 33
261 Bosnia_and_Herzegovina 12947 T 33 33
262 Bosnia_and_Herzegovina 12948 T 33 33
263 Bosnia_and_Herzegovina 12949 A 33 33
264 Bosnia_and_Herzegovina 12950 T 33 33
265 Bosnia_and_Herzegovina 12951 A 33 33
266 Bosnia_and_Herzegovina 12952 C 33 33
267 Bosnia_and_Herzegovina 12953 T 33 33
268 Bosnia_and_Herzegovina 12954 T 33 33
269 Bosnia_and_Herzegovina 12955 T 33 33
270 Bosnia_and_Herzegovina 12956 A 33 33
271 Bosnia_and_Herzegovina 12957 T 33 33
272 Bosnia_and_Herzegovina 12958 T 33 33
273 Bosnia_and_Herzegovina 12959 A 33 33
274 Bosnia_and_Herzegovina 12960 A 33 33
275 Bosnia_and_Herzegovina 12961 A 33 33
276 Bosnia_and_Herzegovina 12962 G 33 33
277 Bosnia_and_Herzegovina 12963 G 33 33
278 Bosnia_and_Herzegovina 12964 A 33 33
279 Bosnia_and_Herzegovina 12965 T 33 33
280 Bosnia_and_Herzegovina 12966 T 33 33
281 Bosnia_and_Herzegovina 12967 A 33 33
282 Bosnia_and_Herzegovina 12968 A 33 33
283 Bosnia_and_Herzegovina 12969 A 33 33
284 Bosnia_and_Herzegovina 12970 C 33 33
285 Bosnia_and_Herzegovina 12971 A 33 33
286 Bosnia_and_Herzegovina 12972 A 33 33
287 Bosnia_and_Herzegovina 12973 C 33 33
288 Bosnia_and_Herzegovina 12974 C 33 33
289 Bosnia_and_Herzegovina 12975 T 33 33
290 Bosnia_and_Herzegovina 12976 A 33 33
291 Bosnia_and_Herzegovina 12977 A 33 33
292 Bosnia_and_Herzegovina 12978 A 33 33
293 Bosnia_and_Herzegovina 12979 T 33 33
294 Bosnia_and_Herzegovina 12980 A 33 33
295 Bosnia_and_Herzegovina 12981 G 33 33
296 Bosnia_and_Herzegovina 12982 A 33 33
297 Bosnia_and_Herzegovina 12983 G 33 33
298 Bosnia_and_Herzegovina 12984 G 33 33
299 Bosnia_and_Herzegovina 12985 T 33 33
300 Bosnia_and_Herzegovina 12986 A 33 33
301 Bosnia_and_Herzegovina 12987 T 33 33
302 Bosnia_and_Herzegovina 12988 G T 33 32 Met4241Ile
303 Bosnia_and_Herzegovina 12989 G 33 33
304 Bosnia_and_Herzegovina 12990 T 33 33
305 Bosnia_and_Herzegovina 12991 A 33 33
306 Bosnia_and_Herzegovina 12992 C 33 33
307 Bosnia_and_Herzegovina 12993 T 33 33
308 Bosnia_and_Herzegovina 12994 T 33 33
309 Bosnia_and_Herzegovina 12995 G 33 33
310 Bosnia_and_Herzegovina 12996 G 33 33
311 Bosnia_and_Herzegovina 12997 T 33 33
312 Bosnia_and_Herzegovina 12998 A 33 33
313 Bosnia_and_Herzegovina 12999 G 33 33
314 Bosnia_and_Herzegovina 13000 T 33 33
315 Bosnia_and_Herzegovina 13001 T 33 33
316 Bosnia_and_Herzegovina 13002 T 33 33
317 Bosnia_and_Herzegovina 13003 A 33 33
318 Bosnia_and_Herzegovina 13004 G 33 33
319 Bosnia_and_Herzegovina 13005 C 33 33
320 Bosnia_and_Herzegovina 13006 T 33 33
321 Bosnia_and_Herzegovina 13007 G 33 33
322 Bosnia_and_Herzegovina 13008 C 33 33
323 Bosnia_and_Herzegovina 13009 C 33 33
324 Bosnia_and_Herzegovina 13010 A 33 33
325 Bosnia_and_Herzegovina 13011 C 33 33
326 Bosnia_and_Herzegovina 13012 A 33 33
327 Bosnia_and_Herzegovina 13013 G 33 33
328 Bosnia_and_Herzegovina 13014 T 33 33
329 Bosnia_and_Herzegovina 13015 A 33 33
330 Bosnia_and_Herzegovina 13016 C 33 33
331 Bosnia_and_Herzegovina 13017 G 33 33
332 Bosnia_and_Herzegovina 13018 T 33 33
333 Bosnia_and_Herzegovina 13019 C 33 33
334 Bosnia_and_Herzegovina 13020 T 33 33
335 Bosnia_and_Herzegovina 13021 A 33 33
336 Bosnia_and_Herzegovina 13022 C 33 33
337 Bosnia_and_Herzegovina 13023 A 33 33
338 Bosnia_and_Herzegovina 13024 A 33 33