National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G I K L M N P Q R S T V W Y
-   594                                      
?                                          
A   84                                      
C   6                                      
D   39                                      
E   27                                      
F   15                                      
G   9                                      
I   30                                      
K   45                                      
L   54                                      
M   27                                      
N   39                                      
P   18                                      
Q   33                                      
R   21                                      
S   45                                      
T   39                                      
V   39                                      
W   6                                      
Y   18                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Qatar 12092 G 16 16
1 Qatar 12093 C 16 16
2 Qatar 12094 T 16 16
3 Qatar 12095 A 16 16
4 Qatar 12096 T 16 16
5 Qatar 12097 A 16 16
6 Qatar 12098 G 16 16
7 Qatar 12099 C 16 16
8 Qatar 12100 C 16 16
9 Qatar 12101 T 16 16
10 Qatar 12102 C 16 16
11 Qatar 12103 A 16 16
12 Qatar 12104 G 16 16
13 Qatar 12105 A 16 16
14 Qatar 12106 G 16 16
15 Qatar 12107 T 16 16
16 Qatar 12108 T 16 16
17 Qatar 12109 T 16 16
18 Qatar 12110 A 16 16
19 Qatar 12111 G 16 16
20 Qatar 12112 T 16 16
21 Qatar 12113 T 16 16
22 Qatar 12114 C 16 16
23 Qatar 12115 C 16 16
24 Qatar 12116 C 16 16
25 Qatar 12117 T 16 16
26 Qatar 12118 T 16 16
27 Qatar 12119 C 16 16
28 Qatar 12120 C 16 16
29 Qatar 12121 A 16 16
30 Qatar 12122 T 16 16
31 Qatar 12123 C 16 16
32 Qatar 12124 A 16 16
33 Qatar 12125 T 16 16
34 Qatar 12126 A 16 16
35 Qatar 12127 T 16 16
36 Qatar 12128 G 16 16
37 Qatar 12129 C 16 16
38 Qatar 12130 A 16 16
39 Qatar 12131 G 16 16
40 Qatar 12132 C 16 16
41 Qatar 12133 T 16 16
42 Qatar 12134 T 16 16
43 Qatar 12135 T 16 16
44 Qatar 12136 T 16 16
45 Qatar 12137 G 16 16
46 Qatar 12138 C 16 16
47 Qatar 12139 T 16 16
48 Qatar 12140 A 16 16
49 Qatar 12141 C 16 16
50 Qatar 12142 T 16 16
51 Qatar 12143 G 16 16
52 Qatar 12144 C 16 16
53 Qatar 12145 T 16 16
54 Qatar 12146 C 16 16
55 Qatar 12147 A 16 16
56 Qatar 12148 A 16 16
57 Qatar 12149 G 16 16
58 Qatar 12150 A 16 16
59 Qatar 12151 A 16 16
60 Qatar 12152 G 16 16
61 Qatar 12153 C 16 16
62 Qatar 12154 T 16 16
63 Qatar 12155 T 16 16
64 Qatar 12156 A 16 16
65 Qatar 12157 T 16 16
66 Qatar 12158 G 16 16
67 Qatar 12159 A 16 16
68 Qatar 12160 G 16 16
69 Qatar 12161 C 16 16
70 Qatar 12162 A 16 16
71 Qatar 12163 G 16 16
72 Qatar 12164 G 16 16
73 Qatar 12165 C 16 16
74 Qatar 12166 T 16 16
75 Qatar 12167 G 16 16
76 Qatar 12168 T 16 16
77 Qatar 12169 T 16 16
78 Qatar 12170 G 16 16
79 Qatar 12171 C 16 16
80 Qatar 12172 T 16 16
81 Qatar 12173 A 16 16
82 Qatar 12174 A 16 16
83 Qatar 12175 T 16 16
84 Qatar 12176 G 16 16
85 Qatar 12177 G 16 16
86 Qatar 12178 T 16 16
87 Qatar 12179 G 16 16
88 Qatar 12180 A 16 16
89 Qatar 12181 T 16 16
90 Qatar 12182 T 16 16
91 Qatar 12183 C 16 16
92 Qatar 12184 T 16 16
93 Qatar 12185 G 16 16
94 Qatar 12186 A 16 16
95 Qatar 12187 A 16 16
96 Qatar 12188 G 16 16
97 Qatar 12189 T 16 16
98 Qatar 12190 T 16 16
99 Qatar 12191 G 16 16
100 Qatar 12192 T 16 16
101 Qatar 12193 T 16 16
102 Qatar 12194 C 16 16
103 Qatar 12195 T 16 16
104 Qatar 12196 T 16 16
105 Qatar 12197 A 16 16
106 Qatar 12198 A 16 16
107 Qatar 12199 A 16 16
108 Qatar 12200 A 16 16
109 Qatar 12201 A 16 16
110 Qatar 12202 G 16 16
111 Qatar 12203 T 16 16
112 Qatar 12204 T 16 16
113 Qatar 12205 G 16 16
114 Qatar 12206 A 16 16
115 Qatar 12207 A 16 16
116 Qatar 12208 G 16 16
117 Qatar 12209 A 16 16
118 Qatar 12210 A 16 16
119 Qatar 12211 G 16 16
120 Qatar 12212 T 16 16
121 Qatar 12213 C 16 16
122 Qatar 12214 T 16 16
123 Qatar 12215 T 16 16
124 Qatar 12216 T 16 16
125 Qatar 12217 G 16 16
126 Qatar 12218 A 16 16
127 Qatar 12219 A 16 16
128 Qatar 12220 T 16 16
129 Qatar 12221 G 16 16
130 Qatar 12222 T 16 16
131 Qatar 12223 G 16 16
132 Qatar 12224 G 16 16
133 Qatar 12225 C 16 16
134 Qatar 12226 T 16 16
135 Qatar 12227 A 16 16
136 Qatar 12228 A 16 16
137 Qatar 12229 A 16 16
138 Qatar 12230 T 16 16
139 Qatar 12231 C 16 16
140 Qatar 12232 T 16 16
141 Qatar 12233 G 16 16
142 Qatar 12234 A 16 16
143 Qatar 12235 A 16 16
144 Qatar 12236 T 16 16
145 Qatar 12237 T 16 16
146 Qatar 12238 T 16 16
147 Qatar 12239 G 16 16
148 Qatar 12240 A 16 16
149 Qatar 12241 C 16 16
150 Qatar 12242 C 16 16
151 Qatar 12243 G 16 16
152 Qatar 12244 T 16 16
153 Qatar 12245 G 16 16
154 Qatar 12246 A 16 16
155 Qatar 12247 T 16 16
156 Qatar 12248 G 16 16
157 Qatar 12249 C 16 16
158 Qatar 12250 A 16 16
159 Qatar 12251 G 16 16
160 Qatar 12252 C 16 16
161 Qatar 12253 C 16 16
162 Qatar 12254 A 16 16
163 Qatar 12255 T 16 16
164 Qatar 12256 G 16 16
165 Qatar 12257 C 16 16
166 Qatar 12258 A 16 16
167 Qatar 12259 A 16 16
168 Qatar 12260 C 16 16
169 Qatar 12261 G 16 16
170 Qatar 12262 T 16 16
171 Qatar 12263 A 16 16
172 Qatar 12264 A 16 16
173 Qatar 12265 G 16 16
174 Qatar 12266 T 16 16
175 Qatar 12267 T 16 16
176 Qatar 12268 G 16 16
177 Qatar 12269 G 16 16
178 Qatar 12270 A 16 16
179 Qatar 12271 A 16 16
180 Qatar 12272 A 16 16
181 Qatar 12273 A 16 16
182 Qatar 12274 G 16 16
183 Qatar 12275 A 16 16
184 Qatar 12276 T 16 16
185 Qatar 12277 G 16 16
186 Qatar 12278 G 16 16
187 Qatar 12279 C 16 16
188 Qatar 12280 T 16 16
189 Qatar 12281 G 16 16
190 Qatar 12282 A 16 16
191 Qatar 12283 T 16 16
192 Qatar 12284 C 16 16
193 Qatar 12285 A 16 16
194 Qatar 12286 A 16 16
195 Qatar 12287 G 16 16
196 Qatar 12288 C 16 16
197 Qatar 12289 T 16 16
198 Qatar 12290 A 16 16
199 Qatar 12291 T 16 16
200 Qatar 12292 G 16 16
201 Qatar 12293 A 16 16
202 Qatar 12294 C 16 16
203 Qatar 12295 C 16 16
204 Qatar 12296 C 16 16
205 Qatar 12297 A 16 16
206 Qatar 12298 A 16 16
207 Qatar 12299 A 16 16
208 Qatar 12300 T 16 16
209 Qatar 12301 G 16 16
210 Qatar 12302 T 16 16
211 Qatar 12303 A 16 16
212 Qatar 12304 T 16 16
213 Qatar 12305 A 16 16
214 Qatar 12306 A 16 16
215 Qatar 12307 A 16 16
216 Qatar 12308 C 16 16
217 Qatar 12309 A 16 16
218 Qatar 12310 G 16 16
219 Qatar 12311 G 16 16
220 Qatar 12312 C 16 16
221 Qatar 12313 T 16 16
222 Qatar 12314 A 16 16
223 Qatar 12315 G 16 16
224 Qatar 12316 A 16 16
225 Qatar 12317 T 16 16
226 Qatar 12318 C 16 16
227 Qatar 12319 T 16 16
228 Qatar 12320 G 16 16
229 Qatar 12321 A 16 16
230 Qatar 12322 G 16 16
231 Qatar 12323 G 16 16
232 Qatar 12324 A 16 16
233 Qatar 12325 C 16 16
234 Qatar 12326 A 16 16
235 Qatar 12327 A 16 16
236 Qatar 12328 G 16 16
237 Qatar 12329 A 16 16
238 Qatar 12330 G 16 16
239 Qatar 12331 G 16 16
240 Qatar 12332 G 16 16
241 Qatar 12333 C 16 16
242 Qatar 12334 A 16 16
243 Qatar 12335 A 16 16
244 Qatar 12336 A 16 16
245 Qatar 12337 A 16 16
246 Qatar 12338 G 16 16
247 Qatar 12339 T 16 16
248 Qatar 12340 T 16 16
249 Qatar 12341 A 16 16
250 Qatar 12342 C 16 16
251 Qatar 12343 T 16 16
252 Qatar 12344 A 16 16
253 Qatar 12345 G 16 16
254 Qatar 12346 T 16 16
255 Qatar 12347 G 16 16
256 Qatar 12348 C 16 16
257 Qatar 12349 T 16 16
258 Qatar 12350 A 16 16
259 Qatar 12351 T 16 16
260 Qatar 12352 G 16 16
261 Qatar 12353 C 16 16
262 Qatar 12354 A 16 16
263 Qatar 12355 G 16 16
264 Qatar 12356 A 16 16
265 Qatar 12357 C 16 16
266 Qatar 12358 A 16 16
267 Qatar 12359 A 16 16
268 Qatar 12360 T 16 16
269 Qatar 12361 G 16 16
270 Qatar 12362 C 16 16
271 Qatar 12363 T 16 16
272 Qatar 12364 T 16 16
273 Qatar 12365 T 16 16
274 Qatar 12366 T 16 16
275 Qatar 12367 C 16 16
276 Qatar 12368 A 16 16
277 Qatar 12369 C 16 16
278 Qatar 12370 T 16 16
279 Qatar 12371 A 16 16
280 Qatar 12372 T 16 16
281 Qatar 12373 G 16 16
282 Qatar 12374 C 16 16
283 Qatar 12375 T 16 16
284 Qatar 12376 T 16 16
285 Qatar 12377 A 16 16
286 Qatar 12378 G 16 16
287 Qatar 12379 A 16 16
288 Qatar 12380 A 16 16
289 Qatar 12381 A 16 16
290 Qatar 12382 G 16 16
291 Qatar 12383 T 16 16
292 Qatar 12384 T 16 16
293 Qatar 12385 G 16 16
294 Qatar 12386 G 16 16
295 Qatar 12387 A 16 16
296 Qatar 12388 T 16 16
297 Qatar 12389 A 16 16
298 Qatar 12390 A 16 16
299 Qatar 12391 T 16 16
300 Qatar 12392 G 16 16
301 Qatar 12393 A 16 16
302 Qatar 12394 T 16 16
303 Qatar 12395 G 16 16
304 Qatar 12396 C 16 16
305 Qatar 12397 A 16 16
306 Qatar 12398 C 16 16
307 Qatar 12399 T 16 16
308 Qatar 12400 C 16 16
309 Qatar 12401 A 16 16
310 Qatar 12402 A 16 16
311 Qatar 12403 C 16 16
312 Qatar 12404 A 16 16
313 Qatar 12405 A 16 16
314 Qatar 12406 C 16 16
315 Qatar 12407 A 16 16
316 Qatar 12408 T 16 16
317 Qatar 12409 T 16 16
318 Qatar 12410 A 16 16
319 Qatar 12411 T 16 16
320 Qatar 12412 C 16 16
321 Qatar 12413 A 16 16
322 Qatar 12414 A 16 16
323 Qatar 12415 C 16 16
324 Qatar 12416 A 16 16
325 Qatar 12417 A 16 16
326 Qatar 12418 T 16 16
327 Qatar 12419 G 16 16
328 Qatar 12420 C 16 16
329 Qatar 12421 A 16 16
330 Qatar 12422 A 16 16
331 Qatar 12423 G 16 16
332 Qatar 12424 A 16 16
333 Qatar 12425 G 16 16
334 Qatar 12426 A 16 16
335 Qatar 12427 T 16 16
336 Qatar 12428 G 16 16
337 Qatar 12429 G 16 16
338 Qatar 12430 T 16 16
339 Qatar 12431 T 16 16
340 Qatar 12432 G 16 16
341 Qatar 12433 T 16 16
342 Qatar 12434 G 16 16
343 Qatar 12435 T 16 16
344 Qatar 12436 T 16 16
345 Qatar 12437 C 16 16
346 Qatar 12438 C 16 16
347 Qatar 12439 C 16 16
348 Qatar 12440 T 16 16
349 Qatar 12441 T 16 16
350 Qatar 12442 G 16 16
351 Qatar 12443 A 16 16
352 Qatar 12444 A 16 16
353 Qatar 12445 C 16 16
354 Qatar 12446 A 16 16
355 Qatar 12447 T 16 16
356 Qatar 12448 A 16 16
357 Qatar 12449 A 16 16
358 Qatar 12450 T 16 16
359 Qatar 12451 A 16 16
360 Qatar 12452 C 16 16
361 Qatar 12453 C 16 16
362 Qatar 12454 T 16 16
363 Qatar 12455 C 16 16
364 Qatar 12456 T 16 16
365 Qatar 12457 T 16 16
366 Qatar 12458 A 16 16
367 Qatar 12459 C 16 16
368 Qatar 12460 A 16 16
369 Qatar 12461 A 16 16
370 Qatar 12462 C 16 16
371 Qatar 12463 A 16 16
372 Qatar 12464 G 16 16
373 Qatar 12465 C 16 16
374 Qatar 12466 A 16 16
375 Qatar 12467 G 16 16
376 Qatar 12468 C 16 16
377 Qatar 12469 C 16 16
378 Qatar 12470 A 16 16
379 Qatar 12471 A 16 16
380 Qatar 12472 A 16 16
381 Qatar 12473 C 16 16
382 Qatar 12474 T 16 16
383 Qatar 12475 A 16 16
384 Qatar 12476 A 16 16
385 Qatar 12477 T 16 16
386 Qatar 12478 G 16 16
387 Qatar 12479 G 16 16
388 Qatar 12480 T 16 16
389 Qatar 12481 T 16 16
390 Qatar 12482 G 16 16
391 Qatar 12483 T 16 16
392 Qatar 12484 C 16 16
393 Qatar 12485 A 16 16
394 Qatar 12486 T 16 16
395 Qatar 12487 A 16 16
396 Qatar 12488 C 16 16
397 Qatar 12489 C 16 16
398 Qatar 12490 A 16 16
399 Qatar 12491 G 16 16
400 Qatar 12492 A 16 16
401 Qatar 12493 C 16 16
402 Qatar 12494 T 16 16
403 Qatar 12495 A 16 16
404 Qatar 12496 T 16 16
405 Qatar 12497 A 16 16
406 Qatar 12498 A 16 16
407 Qatar 12499 C 16 16
408 Qatar 12500 A 16 16
409 Qatar 12501 C 16 16
410 Qatar 12502 A 16 16
411 Qatar 12503 T 16 16
412 Qatar 12504 A 16 16
413 Qatar 12505 T 16 16
414 Qatar 12506 A 16 16
415 Qatar 12507 A 16 16
416 Qatar 12508 A 16 16
417 Qatar 12509 A 16 16
418 Qatar 12510 A 16 16
419 Qatar 12511 T 16 16
420 Qatar 12512 A 16 16
421 Qatar 12513 C 16 16
422 Qatar 12514 G 16 16
423 Qatar 12515 T 16 16
424 Qatar 12516 G 16 16
425 Qatar 12517 T 16 16
426 Qatar 12518 G 16 16
427 Qatar 12519 A 16 16
428 Qatar 12520 T 16 16
429 Qatar 12521 G 16 16
430 Qatar 12522 G 16 16
431 Qatar 12523 T 16 16
432 Qatar 12524 A 16 16
433 Qatar 12525 C 16 16
434 Qatar 12526 A 16 16
435 Qatar 12527 A 16 16
436 Qatar 12528 C 16 16
437 Qatar 12529 A 16 16
438 Qatar 12530 T 16 16
439 Qatar 12531 T 16 16
440 Qatar 12532 T 16 16
441 Qatar 12533 A 16 16
442 Qatar 12534 C 16 16
443 Qatar 12535 T 16 16
444 Qatar 12536 T 16 16
445 Qatar 12537 A 16 16
446 Qatar 12538 T 16 16
447 Qatar 12539 G 16 16
448 Qatar 12540 C 16 16
449 Qatar 12541 A 16 16
450 Qatar 12542 T 16 16
451 Qatar 12543 C 16 16
452 Qatar 12544 A 16 16
453 Qatar 12545 G 16 16
454 Qatar 12546 C 16 16
455 Qatar 12547 A 16 16
456 Qatar 12548 T 16 16
457 Qatar 12549 T 16 16
458 Qatar 12550 G 16 16
459 Qatar 12551 T 16 16
460 Qatar 12552 G 16 16
461 Qatar 12553 G 16 16
462 Qatar 12554 G 16 16
463 Qatar 12555 A 16 16
464 Qatar 12556 A 16 16
465 Qatar 12557 A 16 16
466 Qatar 12558 T 16 16
467 Qatar 12559 C 16 16
468 Qatar 12560 C 16 16
469 Qatar 12561 A 16 16
470 Qatar 12562 A 16 16
471 Qatar 12563 C 16 16
472 Qatar 12564 A 16 16
473 Qatar 12565 G 16 16
474 Qatar 12566 G 16 16
475 Qatar 12567 T 16 16
476 Qatar 12568 T 16 16
477 Qatar 12569 G 16 16
478 Qatar 12570 T 16 16
479 Qatar 12571 A 16 16
480 Qatar 12572 G 16 16
481 Qatar 12573 A 16 16
482 Qatar 12574 T 16 16
483 Qatar 12575 G 16 16
484 Qatar 12576 C 16 16
485 Qatar 12577 A 16 16
486 Qatar 12578 G 16 16
487 Qatar 12579 A 16 16
488 Qatar 12580 T 16 16
489 Qatar 12581 A 16 16
490 Qatar 12582 G 16 16
491 Qatar 12583 T 16 16
492 Qatar 12584 A 16 16
493 Qatar 12585 A 16 16
494 Qatar 12586 A 16 16
495 Qatar 12587 A 16 16
496 Qatar 12588 T 16 16
497 Qatar 12589 T 16 16
498 Qatar 12590 G 16 16
499 Qatar 12591 T 16 16
500 Qatar 12592 T 16 16
501 Qatar 12593 C 16 16
502 Qatar 12594 A 16 16
503 Qatar 12595 A 16 16
504 Qatar 12596 C 16 16
505 Qatar 12597 T 16 16
506 Qatar 12598 T 16 16
507 Qatar 12599 A 16 16
508 Qatar 12600 G 16 16
509 Qatar 12601 T 16 16
510 Qatar 12602 G 16 16
511 Qatar 12603 A 16 16
512 Qatar 12604 A 16 16
513 Qatar 12605 A 16 16
514 Qatar 12606 T 16 16
515 Qatar 12607 T 16 16
516 Qatar 12608 A 16 16
517 Qatar 12609 G 16 16
518 Qatar 12610 T 16 16
519 Qatar 12611 A 16 16
520 Qatar 12612 T 16 16
521 Qatar 12613 G 16 16
522 Qatar 12614 G 16 16
523 Qatar 12615 A 16 16
524 Qatar 12616 C 16 16
525 Qatar 12617 A 16 16
526 Qatar 12618 A 16 16
527 Qatar 12619 T 16 16
528 Qatar 12620 T 16 16
529 Qatar 12621 C 16 16
530 Qatar 12622 A 16 16
531 Qatar 12623 C 16 16
532 Qatar 12624 C 16 16
533 Qatar 12625 T 16 16
534 Qatar 12626 A 16 16
535 Qatar 12627 A 16 16
536 Qatar 12628 T 16 16
537 Qatar 12629 T 16 16
538 Qatar 12630 T 16 16
539 Qatar 12631 A 16 16
540 Qatar 12632 G 16 16
541 Qatar 12633 C 16 16
542 Qatar 12634 A 16 16
543 Qatar 12635 T 16 16
544 Qatar 12636 G 16 16
545 Qatar 12637 G 16 16
546 Qatar 12638 C 16 16
547 Qatar 12639 C 16 16
548 Qatar 12640 T 16 16
549 Qatar 12641 C 16 16
550 Qatar 12642 T 16 16
551 Qatar 12643 T 16 16
552 Qatar 12644 A 16 16
553 Qatar 12645 T 16 16
554 Qatar 12646 T 16 16
555 Qatar 12647 G 16 16
556 Qatar 12648 T 16 16
557 Qatar 12649 A 16 16
558 Qatar 12650 A 16 16
559 Qatar 12651 C 16 16
560 Qatar 12652 A 16 16
561 Qatar 12653 G 16 16
562 Qatar 12654 C 16 16
563 Qatar 12655 T 16 16
564 Qatar 12656 T 16 16
565 Qatar 12657 T 16 16
566 Qatar 12658 A 16 16
567 Qatar 12659 A 16 16
568 Qatar 12660 G 16 16
569 Qatar 12661 G 16 16
570 Qatar 12662 G 16 16
571 Qatar 12663 C 16 16
572 Qatar 12664 C 16 16
573 Qatar 12665 A 16 16
574 Qatar 12666 A 16 16
575 Qatar 12667 T 16 16
576 Qatar 12668 T 16 16
577 Qatar 12669 C 16 16
578 Qatar 12670 T 16 16
579 Qatar 12671 G 16 16
580 Qatar 12672 C 16 16
581 Qatar 12673 T 16 16
582 Qatar 12674 G 16 16
583 Qatar 12675 T 16 16
584 Qatar 12676 C 16 16
585 Qatar 12677 A 16 16
586 Qatar 12678 A 16 16
587 Qatar 12679 A 16 16
588 Qatar 12680 T 16 16
589 Qatar 12681 T 16 16
590 Qatar 12682 A 16 16
591 Qatar 12683 C 16 16
592 Qatar 12684 A 16 16
593 Qatar 12685 G 16 16