National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G I K L M N P Q R S T V W Y
-   594                                      
?                                          
A   84                                      
C   6                                      
D   39                                      
E   27                                      
F   15                                      
G   9                                      
I   30                                      
K   45                                      
L   54                                      
M   27                                      
N   39                                      
P   18                                      
Q   33                                      
R   21                                      
S   45                                      
T   39                                      
V   39                                      
W   6                                      
Y   18                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Moldova 12092 G 9 9
1 Moldova 12093 C 9 9
2 Moldova 12094 T 9 9
3 Moldova 12095 A 9 9
4 Moldova 12096 T 9 9
5 Moldova 12097 A 9 9
6 Moldova 12098 G 9 9
7 Moldova 12099 C 9 9
8 Moldova 12100 C 9 9
9 Moldova 12101 T 9 9
10 Moldova 12102 C 9 9
11 Moldova 12103 A 9 9
12 Moldova 12104 G 9 9
13 Moldova 12105 A 9 9
14 Moldova 12106 G 9 9
15 Moldova 12107 T 9 9
16 Moldova 12108 T 9 9
17 Moldova 12109 T 9 9
18 Moldova 12110 A 9 9
19 Moldova 12111 G 9 9
20 Moldova 12112 T 9 9
21 Moldova 12113 T 9 9
22 Moldova 12114 C 9 9
23 Moldova 12115 C 9 9
24 Moldova 12116 C 9 9
25 Moldova 12117 T 9 9
26 Moldova 12118 T 9 9
27 Moldova 12119 C 9 9
28 Moldova 12120 C 9 9
29 Moldova 12121 A 9 9
30 Moldova 12122 T 9 9
31 Moldova 12123 C 9 9
32 Moldova 12124 A 9 9
33 Moldova 12125 T 9 9
34 Moldova 12126 A 9 9
35 Moldova 12127 T 9 9
36 Moldova 12128 G 9 9
37 Moldova 12129 C 9 9
38 Moldova 12130 A 9 9
39 Moldova 12131 G 9 9
40 Moldova 12132 C 9 9
41 Moldova 12133 T 9 9
42 Moldova 12134 T 9 9
43 Moldova 12135 T 9 9
44 Moldova 12136 T 9 9
45 Moldova 12137 G 9 9
46 Moldova 12138 C 9 9
47 Moldova 12139 T 9 9
48 Moldova 12140 A 9 9
49 Moldova 12141 C 9 9
50 Moldova 12142 T 9 9
51 Moldova 12143 G 9 9
52 Moldova 12144 C 9 9
53 Moldova 12145 T 9 9
54 Moldova 12146 C 9 9
55 Moldova 12147 A 9 9
56 Moldova 12148 A 9 9
57 Moldova 12149 G 9 9
58 Moldova 12150 A 9 9
59 Moldova 12151 A 9 9
60 Moldova 12152 G 9 9
61 Moldova 12153 C 9 9
62 Moldova 12154 T 9 9
63 Moldova 12155 T 9 9
64 Moldova 12156 A 9 9
65 Moldova 12157 T 9 9
66 Moldova 12158 G 9 9
67 Moldova 12159 A 9 9
68 Moldova 12160 G 9 9
69 Moldova 12161 C 9 9
70 Moldova 12162 A 9 9
71 Moldova 12163 G 9 9
72 Moldova 12164 G 9 9
73 Moldova 12165 C 9 9
74 Moldova 12166 T 9 9
75 Moldova 12167 G 9 9
76 Moldova 12168 T 9 9
77 Moldova 12169 T 9 9
78 Moldova 12170 G 9 9
79 Moldova 12171 C 9 9
80 Moldova 12172 T 9 9
81 Moldova 12173 A 9 9
82 Moldova 12174 A 9 9
83 Moldova 12175 T 9 9
84 Moldova 12176 G 9 9
85 Moldova 12177 G 9 9
86 Moldova 12178 T 9 9
87 Moldova 12179 G 9 9
88 Moldova 12180 A 9 9
89 Moldova 12181 T 9 9
90 Moldova 12182 T 9 9
91 Moldova 12183 C 9 9
92 Moldova 12184 T 9 9
93 Moldova 12185 G 9 9
94 Moldova 12186 A 9 9
95 Moldova 12187 A 9 9
96 Moldova 12188 G 9 9
97 Moldova 12189 T 9 9
98 Moldova 12190 T 9 9
99 Moldova 12191 G 9 9
100 Moldova 12192 T 9 9
101 Moldova 12193 T 9 9
102 Moldova 12194 C 9 9
103 Moldova 12195 T 9 9
104 Moldova 12196 T 9 9
105 Moldova 12197 A 9 9
106 Moldova 12198 A 9 9
107 Moldova 12199 A 9 9
108 Moldova 12200 A 9 9
109 Moldova 12201 A 9 9
110 Moldova 12202 G 9 9
111 Moldova 12203 T 9 9
112 Moldova 12204 T 9 9
113 Moldova 12205 G 9 9
114 Moldova 12206 A 9 9
115 Moldova 12207 A 9 9
116 Moldova 12208 G 9 9
117 Moldova 12209 A 9 9
118 Moldova 12210 A 9 9
119 Moldova 12211 G 9 9
120 Moldova 12212 T 9 9
121 Moldova 12213 C 9 9
122 Moldova 12214 T 9 9
123 Moldova 12215 T 9 9
124 Moldova 12216 T 9 9
125 Moldova 12217 G 9 9
126 Moldova 12218 A 9 9
127 Moldova 12219 A 9 9
128 Moldova 12220 T 9 9
129 Moldova 12221 G 9 9
130 Moldova 12222 T 9 9
131 Moldova 12223 G 9 9
132 Moldova 12224 G 9 9
133 Moldova 12225 C 9 9
134 Moldova 12226 T 9 9
135 Moldova 12227 A 9 9
136 Moldova 12228 A 9 9
137 Moldova 12229 A 9 9
138 Moldova 12230 T 9 9
139 Moldova 12231 C 9 9
140 Moldova 12232 T 9 9
141 Moldova 12233 G 9 9
142 Moldova 12234 A 9 9
143 Moldova 12235 A 9 9
144 Moldova 12236 T 9 9
145 Moldova 12237 T 9 9
146 Moldova 12238 T 9 9
147 Moldova 12239 G 9 9
148 Moldova 12240 A 9 9
149 Moldova 12241 C 9 9
150 Moldova 12242 C 9 9
151 Moldova 12243 G 9 9
152 Moldova 12244 T 9 9
153 Moldova 12245 G 9 9
154 Moldova 12246 A 9 9
155 Moldova 12247 T 9 9
156 Moldova 12248 G 9 9
157 Moldova 12249 C 9 9
158 Moldova 12250 A 9 9
159 Moldova 12251 G 9 9
160 Moldova 12252 C 9 9
161 Moldova 12253 C 9 9
162 Moldova 12254 A 9 9
163 Moldova 12255 T 9 9
164 Moldova 12256 G 9 9
165 Moldova 12257 C 9 9
166 Moldova 12258 A 9 9
167 Moldova 12259 A 9 9
168 Moldova 12260 C 9 9
169 Moldova 12261 G 9 9
170 Moldova 12262 T 9 9
171 Moldova 12263 A 9 9
172 Moldova 12264 A 9 9
173 Moldova 12265 G 9 9
174 Moldova 12266 T 9 9
175 Moldova 12267 T 9 9
176 Moldova 12268 G 9 9
177 Moldova 12269 G 9 9
178 Moldova 12270 A 9 9
179 Moldova 12271 A 9 9
180 Moldova 12272 A 9 9
181 Moldova 12273 A 9 9
182 Moldova 12274 G 9 9
183 Moldova 12275 A 9 9
184 Moldova 12276 T 9 9
185 Moldova 12277 G 9 9
186 Moldova 12278 G 9 9
187 Moldova 12279 C 9 9
188 Moldova 12280 T 9 9
189 Moldova 12281 G 9 9
190 Moldova 12282 A 9 9
191 Moldova 12283 T 9 9
192 Moldova 12284 C 9 9
193 Moldova 12285 A 9 9
194 Moldova 12286 A 9 9
195 Moldova 12287 G 9 9
196 Moldova 12288 C 9 9
197 Moldova 12289 T 9 9
198 Moldova 12290 A 9 9
199 Moldova 12291 T 9 9
200 Moldova 12292 G 9 9
201 Moldova 12293 A 9 9
202 Moldova 12294 C 9 9
203 Moldova 12295 C 9 9
204 Moldova 12296 C 9 9
205 Moldova 12297 A 9 9
206 Moldova 12298 A 9 9
207 Moldova 12299 A 9 9
208 Moldova 12300 T 9 9
209 Moldova 12301 G 9 9
210 Moldova 12302 T 9 9
211 Moldova 12303 A 9 9
212 Moldova 12304 T 9 9
213 Moldova 12305 A 9 9
214 Moldova 12306 A 9 9
215 Moldova 12307 A 9 9
216 Moldova 12308 C 9 9
217 Moldova 12309 A 9 9
218 Moldova 12310 G 9 9
219 Moldova 12311 G 9 9
220 Moldova 12312 C 9 9
221 Moldova 12313 T 9 9
222 Moldova 12314 A 9 9
223 Moldova 12315 G 9 9
224 Moldova 12316 A 9 9
225 Moldova 12317 T 9 9
226 Moldova 12318 C 9 9
227 Moldova 12319 T 9 9
228 Moldova 12320 G 9 9
229 Moldova 12321 A 9 9
230 Moldova 12322 G 9 9
231 Moldova 12323 G 9 9
232 Moldova 12324 A 9 9
233 Moldova 12325 C 9 9
234 Moldova 12326 A 9 9
235 Moldova 12327 A 9 9
236 Moldova 12328 G 9 9
237 Moldova 12329 A 9 9
238 Moldova 12330 G 9 9
239 Moldova 12331 G 9 9
240 Moldova 12332 G 9 9
241 Moldova 12333 C 9 9
242 Moldova 12334 A 9 9
243 Moldova 12335 A 9 9
244 Moldova 12336 A 9 9
245 Moldova 12337 A 9 9
246 Moldova 12338 G 9 9
247 Moldova 12339 T 9 9
248 Moldova 12340 T 9 9
249 Moldova 12341 A 9 9
250 Moldova 12342 C 9 9
251 Moldova 12343 T 9 9
252 Moldova 12344 A 9 9
253 Moldova 12345 G 9 9
254 Moldova 12346 T 9 9
255 Moldova 12347 G 9 9
256 Moldova 12348 C 9 9
257 Moldova 12349 T 9 9
258 Moldova 12350 A 9 9
259 Moldova 12351 T 9 9
260 Moldova 12352 G 9 9
261 Moldova 12353 C 9 9
262 Moldova 12354 A 9 9
263 Moldova 12355 G 9 9
264 Moldova 12356 A 9 9
265 Moldova 12357 C 9 9
266 Moldova 12358 A 9 9
267 Moldova 12359 A 9 9
268 Moldova 12360 T 9 9
269 Moldova 12361 G 9 9
270 Moldova 12362 C 9 9
271 Moldova 12363 T 9 9
272 Moldova 12364 T 9 9
273 Moldova 12365 T 9 9
274 Moldova 12366 T 9 9
275 Moldova 12367 C 9 9
276 Moldova 12368 A 9 9
277 Moldova 12369 C 9 9
278 Moldova 12370 T 9 9
279 Moldova 12371 A 9 9
280 Moldova 12372 T 9 9
281 Moldova 12373 G 9 9
282 Moldova 12374 C 9 9
283 Moldova 12375 T 9 9
284 Moldova 12376 T 9 9
285 Moldova 12377 A 9 9
286 Moldova 12378 G 9 9
287 Moldova 12379 A 9 9
288 Moldova 12380 A 9 9
289 Moldova 12381 A 9 9
290 Moldova 12382 G 9 9
291 Moldova 12383 T 9 9
292 Moldova 12384 T 9 9
293 Moldova 12385 G 9 9
294 Moldova 12386 G 9 9
295 Moldova 12387 A 9 9
296 Moldova 12388 T 9 9
297 Moldova 12389 A 9 9
298 Moldova 12390 A 9 9
299 Moldova 12391 T 9 9
300 Moldova 12392 G 9 9
301 Moldova 12393 A 9 9
302 Moldova 12394 T 9 9
303 Moldova 12395 G 9 9
304 Moldova 12396 C 9 9
305 Moldova 12397 A 9 9
306 Moldova 12398 C 9 9
307 Moldova 12399 T 9 9
308 Moldova 12400 C 9 9
309 Moldova 12401 A 9 9
310 Moldova 12402 A 9 9
311 Moldova 12403 C 9 9
312 Moldova 12404 A 9 9
313 Moldova 12405 A 9 9
314 Moldova 12406 C 9 9
315 Moldova 12407 A 9 9
316 Moldova 12408 T 9 9
317 Moldova 12409 T 9 9
318 Moldova 12410 A 9 9
319 Moldova 12411 T 9 9
320 Moldova 12412 C 9 9
321 Moldova 12413 A 9 9
322 Moldova 12414 A 9 9
323 Moldova 12415 C 9 9
324 Moldova 12416 A 9 9
325 Moldova 12417 A 9 9
326 Moldova 12418 T 9 9
327 Moldova 12419 G 9 9
328 Moldova 12420 C 9 9
329 Moldova 12421 A 9 9
330 Moldova 12422 A 9 9
331 Moldova 12423 G 9 9
332 Moldova 12424 A 9 9
333 Moldova 12425 G 9 9
334 Moldova 12426 A 9 9
335 Moldova 12427 T 9 9
336 Moldova 12428 G 9 9
337 Moldova 12429 G 9 9
338 Moldova 12430 T 9 9
339 Moldova 12431 T 9 9
340 Moldova 12432 G 9 9
341 Moldova 12433 T 9 9
342 Moldova 12434 G 9 9
343 Moldova 12435 T 9 9
344 Moldova 12436 T 9 9
345 Moldova 12437 C 9 9
346 Moldova 12438 C 9 9
347 Moldova 12439 C 9 9
348 Moldova 12440 T 9 9
349 Moldova 12441 T 9 9
350 Moldova 12442 G 9 9
351 Moldova 12443 A 9 9
352 Moldova 12444 A 9 9
353 Moldova 12445 C 9 9
354 Moldova 12446 A 9 9
355 Moldova 12447 T 9 9
356 Moldova 12448 A 9 9
357 Moldova 12449 A 9 9
358 Moldova 12450 T 9 9
359 Moldova 12451 A 9 9
360 Moldova 12452 C 9 9
361 Moldova 12453 C 9 9
362 Moldova 12454 T 9 9
363 Moldova 12455 C 9 9
364 Moldova 12456 T 9 9
365 Moldova 12457 T 9 9
366 Moldova 12458 A 9 9
367 Moldova 12459 C 9 9
368 Moldova 12460 A 9 9
369 Moldova 12461 A 9 9
370 Moldova 12462 C 9 9
371 Moldova 12463 A 9 9
372 Moldova 12464 G 9 9
373 Moldova 12465 C 9 9
374 Moldova 12466 A 9 9
375 Moldova 12467 G 9 9
376 Moldova 12468 C 9 9
377 Moldova 12469 C 9 9
378 Moldova 12470 A 9 9
379 Moldova 12471 A 9 9
380 Moldova 12472 A 9 9
381 Moldova 12473 C 9 9
382 Moldova 12474 T 9 9
383 Moldova 12475 A 9 9
384 Moldova 12476 A 9 9
385 Moldova 12477 T 9 9
386 Moldova 12478 G 9 9
387 Moldova 12479 G 9 9
388 Moldova 12480 T 9 9
389 Moldova 12481 T 9 9
390 Moldova 12482 G 9 9
391 Moldova 12483 T 9 9
392 Moldova 12484 C 9 9
393 Moldova 12485 A 9 9
394 Moldova 12486 T 9 9
395 Moldova 12487 A 9 9
396 Moldova 12488 C 9 9
397 Moldova 12489 C 9 9
398 Moldova 12490 A 9 9
399 Moldova 12491 G 9 9
400 Moldova 12492 A 9 9
401 Moldova 12493 C 9 9
402 Moldova 12494 T 9 9
403 Moldova 12495 A 9 9
404 Moldova 12496 T 9 9
405 Moldova 12497 A 9 9
406 Moldova 12498 A 9 9
407 Moldova 12499 C 9 9
408 Moldova 12500 A 9 9
409 Moldova 12501 C 9 9
410 Moldova 12502 A 9 9
411 Moldova 12503 T 9 9
412 Moldova 12504 A 9 9
413 Moldova 12505 T 9 9
414 Moldova 12506 A 9 9
415 Moldova 12507 A 9 9
416 Moldova 12508 A 9 9
417 Moldova 12509 A 9 9
418 Moldova 12510 A 9 9
419 Moldova 12511 T 9 9
420 Moldova 12512 A 9 9
421 Moldova 12513 C 9 9
422 Moldova 12514 G 9 9
423 Moldova 12515 T 9 9
424 Moldova 12516 G 9 9
425 Moldova 12517 T 9 9
426 Moldova 12518 G 9 9
427 Moldova 12519 A 9 9
428 Moldova 12520 T 9 9
429 Moldova 12521 G 9 9
430 Moldova 12522 G 9 9
431 Moldova 12523 T 9 9
432 Moldova 12524 A 9 9
433 Moldova 12525 C 9 9
434 Moldova 12526 A 9 9
435 Moldova 12527 A 9 9
436 Moldova 12528 C 9 9
437 Moldova 12529 A 9 9
438 Moldova 12530 T 9 9
439 Moldova 12531 T 9 9
440 Moldova 12532 T 9 9
441 Moldova 12533 A 9 9
442 Moldova 12534 C 9 9
443 Moldova 12535 T 9 9
444 Moldova 12536 T 9 9
445 Moldova 12537 A 9 9
446 Moldova 12538 T 9 9
447 Moldova 12539 G 9 9
448 Moldova 12540 C 9 9
449 Moldova 12541 A 9 9
450 Moldova 12542 T 9 9
451 Moldova 12543 C 9 9
452 Moldova 12544 A 9 9
453 Moldova 12545 G 9 9
454 Moldova 12546 C 9 9
455 Moldova 12547 A 9 9
456 Moldova 12548 T 9 9
457 Moldova 12549 T 9 9
458 Moldova 12550 G 9 9
459 Moldova 12551 T 9 9
460 Moldova 12552 G 9 9
461 Moldova 12553 G 9 9
462 Moldova 12554 G 9 9
463 Moldova 12555 A 9 9
464 Moldova 12556 A 9 9
465 Moldova 12557 A 9 9
466 Moldova 12558 T 9 9
467 Moldova 12559 C 9 9
468 Moldova 12560 C 9 9
469 Moldova 12561 A 9 9
470 Moldova 12562 A 9 9
471 Moldova 12563 C 9 9
472 Moldova 12564 A 9 9
473 Moldova 12565 G 9 9
474 Moldova 12566 G 9 9
475 Moldova 12567 T 9 9
476 Moldova 12568 T 9 9
477 Moldova 12569 G 9 9
478 Moldova 12570 T 9 9
479 Moldova 12571 A 9 9
480 Moldova 12572 G 9 9
481 Moldova 12573 A 9 9
482 Moldova 12574 T 9 9
483 Moldova 12575 G 9 9
484 Moldova 12576 C 9 9
485 Moldova 12577 A 9 9
486 Moldova 12578 G 9 9
487 Moldova 12579 A 9 9
488 Moldova 12580 T 9 9
489 Moldova 12581 A 9 9
490 Moldova 12582 G 9 9
491 Moldova 12583 T 9 9
492 Moldova 12584 A 9 9
493 Moldova 12585 A 9 9
494 Moldova 12586 A 9 9
495 Moldova 12587 A 9 9
496 Moldova 12588 T 9 9
497 Moldova 12589 T 9 9
498 Moldova 12590 G 9 9
499 Moldova 12591 T 9 9
500 Moldova 12592 T 9 9
501 Moldova 12593 C 9 9
502 Moldova 12594 A 9 9
503 Moldova 12595 A 9 9
504 Moldova 12596 C 9 9
505 Moldova 12597 T 9 9
506 Moldova 12598 T 9 9
507 Moldova 12599 A 9 9
508 Moldova 12600 G 9 9
509 Moldova 12601 T 9 9
510 Moldova 12602 G 9 9
511 Moldova 12603 A 9 9
512 Moldova 12604 A 9 9
513 Moldova 12605 A 9 9
514 Moldova 12606 T 9 9
515 Moldova 12607 T 9 9
516 Moldova 12608 A 9 9
517 Moldova 12609 G 9 9
518 Moldova 12610 T 9 9
519 Moldova 12611 A 9 9
520 Moldova 12612 T 9 9
521 Moldova 12613 G 9 9
522 Moldova 12614 G 9 9
523 Moldova 12615 A 9 9
524 Moldova 12616 C 9 9
525 Moldova 12617 A 9 9
526 Moldova 12618 A 9 9
527 Moldova 12619 T 9 9
528 Moldova 12620 T 9 9
529 Moldova 12621 C 9 9
530 Moldova 12622 A 9 9
531 Moldova 12623 C 9 9
532 Moldova 12624 C 9 9
533 Moldova 12625 T 9 9
534 Moldova 12626 A 9 9
535 Moldova 12627 A 9 9
536 Moldova 12628 T 9 9
537 Moldova 12629 T 9 9
538 Moldova 12630 T 9 9
539 Moldova 12631 A 9 9
540 Moldova 12632 G 9 9
541 Moldova 12633 C 9 9
542 Moldova 12634 A 9 9
543 Moldova 12635 T 9 9
544 Moldova 12636 G 9 9
545 Moldova 12637 G 9 9
546 Moldova 12638 C 9 9
547 Moldova 12639 C 9 9
548 Moldova 12640 T 9 9
549 Moldova 12641 C 9 9
550 Moldova 12642 T 9 9
551 Moldova 12643 T 9 9
552 Moldova 12644 A 9 9
553 Moldova 12645 T 9 9
554 Moldova 12646 T 9 9
555 Moldova 12647 G 9 9
556 Moldova 12648 T 9 9
557 Moldova 12649 A 9 9
558 Moldova 12650 A 9 9
559 Moldova 12651 C 9 9
560 Moldova 12652 A 9 9
561 Moldova 12653 G 9 9
562 Moldova 12654 C 9 9
563 Moldova 12655 T 9 9
564 Moldova 12656 T 9 9
565 Moldova 12657 T 9 9
566 Moldova 12658 A 9 9
567 Moldova 12659 A 9 9
568 Moldova 12660 G 9 9
569 Moldova 12661 G 9 9
570 Moldova 12662 G 9 9
571 Moldova 12663 C 9 9
572 Moldova 12664 C 9 9
573 Moldova 12665 A 9 9
574 Moldova 12666 A 9 9
575 Moldova 12667 T 9 9
576 Moldova 12668 T 9 9
577 Moldova 12669 C 9 9
578 Moldova 12670 T 9 9
579 Moldova 12671 G 9 9
580 Moldova 12672 C 9 9
581 Moldova 12673 T 9 9
582 Moldova 12674 G 9 9
583 Moldova 12675 T 9 9
584 Moldova 12676 C 9 9
585 Moldova 12677 A 9 9
586 Moldova 12678 A 9 9
587 Moldova 12679 A 9 9
588 Moldova 12680 T 9 9
589 Moldova 12681 T 9 9
590 Moldova 12682 A 9 9
591 Moldova 12683 C 9 9
592 Moldova 12684 A 9 9
593 Moldova 12685 G 9 9