National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G I K L M N P Q R S T V W Y
-   594                                      
?                                          
A   84                                      
C   6                                      
D   39                                      
E   27                                      
F   15                                      
G   9                                      
I   30                                      
K   45                                      
L   54                 1                    
M   27                                      
N   39                                      
P   18                                      
Q   33                                      
R   21   1                                  
S   45         1                            
T   39                                      
V   39                                      
W   6                                      
Y   18                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Iraq 12092 G 31 31
1 Iraq 12093 C 31 31
2 Iraq 12094 T 31 31
3 Iraq 12095 A 31 31
4 Iraq 12096 T 31 31
5 Iraq 12097 A 31 31
6 Iraq 12098 G 31 31
7 Iraq 12099 C 31 31
8 Iraq 12100 C 31 31
9 Iraq 12101 T 31 31
10 Iraq 12102 C 31 31
11 Iraq 12103 A 31 31
12 Iraq 12104 G 31 31
13 Iraq 12105 A 31 31
14 Iraq 12106 G 31 31
15 Iraq 12107 T 31 31
16 Iraq 12108 T 31 31
17 Iraq 12109 T 31 31
18 Iraq 12110 A 31 31
19 Iraq 12111 G 31 31
20 Iraq 12112 T 31 31
21 Iraq 12113 T 31 31
22 Iraq 12114 C 31 31
23 Iraq 12115 C 31 31
24 Iraq 12116 C 31 31
25 Iraq 12117 T 31 31
26 Iraq 12118 T 31 31
27 Iraq 12119 C 31 31
28 Iraq 12120 C 31 31
29 Iraq 12121 A 31 31
30 Iraq 12122 T 31 31
31 Iraq 12123 C 31 31
32 Iraq 12124 A 31 31
33 Iraq 12125 T 31 31
34 Iraq 12126 A 31 31
35 Iraq 12127 T 31 31
36 Iraq 12128 G 31 31
37 Iraq 12129 C 31 31
38 Iraq 12130 A 31 31
39 Iraq 12131 G 31 31
40 Iraq 12132 C 31 31
41 Iraq 12133 T 31 31
42 Iraq 12134 T 31 31
43 Iraq 12135 T 31 31
44 Iraq 12136 T 31 31
45 Iraq 12137 G 31 31
46 Iraq 12138 C 31 31
47 Iraq 12139 T 31 31
48 Iraq 12140 A 31 31
49 Iraq 12141 C 31 31
50 Iraq 12142 T 31 31
51 Iraq 12143 G 31 31
52 Iraq 12144 C 31 31
53 Iraq 12145 T 31 31
54 Iraq 12146 C 31 31
55 Iraq 12147 A 31 31
56 Iraq 12148 A 31 31
57 Iraq 12149 G 31 31
58 Iraq 12150 A 31 31
59 Iraq 12151 A 31 31
60 Iraq 12152 G 31 31
61 Iraq 12153 C 31 31
62 Iraq 12154 T 31 31
63 Iraq 12155 T 31 31
64 Iraq 12156 A 31 31
65 Iraq 12157 T 31 31
66 Iraq 12158 G 31 31
67 Iraq 12159 A 31 31
68 Iraq 12160 G 31 31
69 Iraq 12161 C 31 31
70 Iraq 12162 A 31 31
71 Iraq 12163 G 31 31
72 Iraq 12164 G 31 31
73 Iraq 12165 C 31 31
74 Iraq 12166 T 31 31
75 Iraq 12167 G 31 31
76 Iraq 12168 T 31 31
77 Iraq 12169 T 31 31
78 Iraq 12170 G 31 31
79 Iraq 12171 C 31 31
80 Iraq 12172 T 31 31
81 Iraq 12173 A 31 31
82 Iraq 12174 A 31 31
83 Iraq 12175 T 31 31
84 Iraq 12176 G 31 31
85 Iraq 12177 G 31 31
86 Iraq 12178 T 31 31
87 Iraq 12179 G 31 31
88 Iraq 12180 A 31 31
89 Iraq 12181 T 31 31
90 Iraq 12182 T 31 31
91 Iraq 12183 C 31 31
92 Iraq 12184 T 31 31
93 Iraq 12185 G 31 31
94 Iraq 12186 A 31 31
95 Iraq 12187 A 31 31
96 Iraq 12188 G 31 31
97 Iraq 12189 T 31 31
98 Iraq 12190 T 31 31
99 Iraq 12191 G 31 31
100 Iraq 12192 T 31 31
101 Iraq 12193 T 31 31
102 Iraq 12194 C 31 31
103 Iraq 12195 T 31 31
104 Iraq 12196 T 31 31
105 Iraq 12197 A 31 31
106 Iraq 12198 A 31 31
107 Iraq 12199 A 31 31
108 Iraq 12200 A 31 31
109 Iraq 12201 A 31 31
110 Iraq 12202 G 31 31
111 Iraq 12203 T 31 31
112 Iraq 12204 T 31 31
113 Iraq 12205 G 31 31
114 Iraq 12206 A 31 31
115 Iraq 12207 A 31 31
116 Iraq 12208 G 31 31
117 Iraq 12209 A 31 31
118 Iraq 12210 A 31 31
119 Iraq 12211 G 31 31
120 Iraq 12212 T 31 31
121 Iraq 12213 C 31 31
122 Iraq 12214 T 31 31
123 Iraq 12215 T 31 31
124 Iraq 12216 T 31 31
125 Iraq 12217 G 31 31
126 Iraq 12218 A 31 31
127 Iraq 12219 A 31 31
128 Iraq 12220 T 31 31
129 Iraq 12221 G 31 31
130 Iraq 12222 T 31 31
131 Iraq 12223 G 31 31
132 Iraq 12224 G 31 31
133 Iraq 12225 C 31 31
134 Iraq 12226 T 31 31
135 Iraq 12227 A 31 31
136 Iraq 12228 A 31 31
137 Iraq 12229 A 31 31
138 Iraq 12230 T 31 31
139 Iraq 12231 C 31 31
140 Iraq 12232 T 31 31
141 Iraq 12233 G 31 31
142 Iraq 12234 A 31 31
143 Iraq 12235 A 31 31
144 Iraq 12236 T 31 31
145 Iraq 12237 T 31 31
146 Iraq 12238 T 31 31
147 Iraq 12239 G 31 31
148 Iraq 12240 A 31 31
149 Iraq 12241 C 31 31
150 Iraq 12242 C T 31 30 Arg3993Cys
151 Iraq 12243 G 31 31
152 Iraq 12244 T 31 31
153 Iraq 12245 G 31 31
154 Iraq 12246 A 31 31
155 Iraq 12247 T 31 31
156 Iraq 12248 G 31 31
157 Iraq 12249 C 31 31
158 Iraq 12250 A 31 31
159 Iraq 12251 G 31 31
160 Iraq 12252 C 31 31
161 Iraq 12253 C 31 31
162 Iraq 12254 A 31 31
163 Iraq 12255 T 31 31
164 Iraq 12256 G 31 31
165 Iraq 12257 C 31 31
166 Iraq 12258 A 31 31
167 Iraq 12259 A 31 31
168 Iraq 12260 C 31 31
169 Iraq 12261 G 31 31
170 Iraq 12262 T 31 31
171 Iraq 12263 A 31 31
172 Iraq 12264 A 31 31
173 Iraq 12265 G 31 31
174 Iraq 12266 T 31 31
175 Iraq 12267 T 31 31
176 Iraq 12268 G 31 31
177 Iraq 12269 G 31 31
178 Iraq 12270 A 31 31
179 Iraq 12271 A 31 31
180 Iraq 12272 A 31 31
181 Iraq 12273 A 31 31
182 Iraq 12274 G 31 31
183 Iraq 12275 A 31 31
184 Iraq 12276 T 31 31
185 Iraq 12277 G 31 31
186 Iraq 12278 G 31 31
187 Iraq 12279 C 31 31
188 Iraq 12280 T 31 31
189 Iraq 12281 G 31 31
190 Iraq 12282 A 31 31
191 Iraq 12283 T 31 31
192 Iraq 12284 C 31 31
193 Iraq 12285 A 31 31
194 Iraq 12286 A 31 31
195 Iraq 12287 G 31 31
196 Iraq 12288 C 31 31
197 Iraq 12289 T 31 31
198 Iraq 12290 A 31 31
199 Iraq 12291 T 31 31
200 Iraq 12292 G 31 31
201 Iraq 12293 A 31 31
202 Iraq 12294 C 31 31
203 Iraq 12295 C 31 31
204 Iraq 12296 C 31 31
205 Iraq 12297 A 31 31
206 Iraq 12298 A 31 31
207 Iraq 12299 A 31 31
208 Iraq 12300 T 31 31
209 Iraq 12301 G 31 31
210 Iraq 12302 T 31 31
211 Iraq 12303 A 31 31
212 Iraq 12304 T 31 31
213 Iraq 12305 A 31 31
214 Iraq 12306 A 31 31
215 Iraq 12307 A 31 31
216 Iraq 12308 C 31 31
217 Iraq 12309 A 31 31
218 Iraq 12310 G 31 31
219 Iraq 12311 G 31 31
220 Iraq 12312 C 31 31
221 Iraq 12313 T 31 31
222 Iraq 12314 A 31 31
223 Iraq 12315 G 31 31
224 Iraq 12316 A 31 31
225 Iraq 12317 T 31 31
226 Iraq 12318 C T 31 30 Ser4018Phe
227 Iraq 12319 T 31 31
228 Iraq 12320 G 31 31
229 Iraq 12321 A 31 31
230 Iraq 12322 G 31 31
231 Iraq 12323 G 31 31
232 Iraq 12324 A 31 31
233 Iraq 12325 C 31 31
234 Iraq 12326 A 31 31
235 Iraq 12327 A 31 31
236 Iraq 12328 G 31 31
237 Iraq 12329 A 31 31
238 Iraq 12330 G 31 31
239 Iraq 12331 G 31 31
240 Iraq 12332 G 31 31
241 Iraq 12333 C 31 31
242 Iraq 12334 A 31 31
243 Iraq 12335 A 31 31
244 Iraq 12336 A 31 31
245 Iraq 12337 A 31 31
246 Iraq 12338 G 31 31
247 Iraq 12339 T 31 31
248 Iraq 12340 T 31 31
249 Iraq 12341 A 31 31
250 Iraq 12342 C 31 31
251 Iraq 12343 T 31 31
252 Iraq 12344 A 31 31
253 Iraq 12345 G 31 31
254 Iraq 12346 T 31 31
255 Iraq 12347 G 31 31
256 Iraq 12348 C 31 31
257 Iraq 12349 T 31 31
258 Iraq 12350 A 31 31
259 Iraq 12351 T 31 31
260 Iraq 12352 G 31 31
261 Iraq 12353 C 31 31
262 Iraq 12354 A 31 31
263 Iraq 12355 G 31 31
264 Iraq 12356 A 31 31
265 Iraq 12357 C 31 31
266 Iraq 12358 A 31 31
267 Iraq 12359 A 31 31
268 Iraq 12360 T 31 31
269 Iraq 12361 G 31 31
270 Iraq 12362 C 31 31
271 Iraq 12363 T 31 31
272 Iraq 12364 T 31 31
273 Iraq 12365 T 31 31
274 Iraq 12366 T 31 31
275 Iraq 12367 C 31 31
276 Iraq 12368 A 31 31
277 Iraq 12369 C 31 31
278 Iraq 12370 T 31 31
279 Iraq 12371 A 31 31
280 Iraq 12372 T 31 31
281 Iraq 12373 G 31 31
282 Iraq 12374 C 31 31
283 Iraq 12375 T 31 31
284 Iraq 12376 T 31 31
285 Iraq 12377 A 31 31
286 Iraq 12378 G 31 31
287 Iraq 12379 A 31 31
288 Iraq 12380 A 31 31
289 Iraq 12381 A 31 31
290 Iraq 12382 G 31 31
291 Iraq 12383 T 31 31
292 Iraq 12384 T 31 31
293 Iraq 12385 G 31 31
294 Iraq 12386 G 31 31
295 Iraq 12387 A 31 31
296 Iraq 12388 T 31 31
297 Iraq 12389 A 31 31
298 Iraq 12390 A 31 31
299 Iraq 12391 T 31 31
300 Iraq 12392 G 31 31
301 Iraq 12393 A 31 31
302 Iraq 12394 T 31 31
303 Iraq 12395 G 31 31
304 Iraq 12396 C 31 31
305 Iraq 12397 A 31 31
306 Iraq 12398 C 31 31
307 Iraq 12399 T 31 31
308 Iraq 12400 C T 31 30 Leu4045Leu
309 Iraq 12401 A 31 31
310 Iraq 12402 A 31 31
311 Iraq 12403 C 31 31
312 Iraq 12404 A 31 31
313 Iraq 12405 A 31 31
314 Iraq 12406 C 31 31
315 Iraq 12407 A 31 31
316 Iraq 12408 T 31 31
317 Iraq 12409 T 31 31
318 Iraq 12410 A 31 31
319 Iraq 12411 T 31 31
320 Iraq 12412 C 31 31
321 Iraq 12413 A 31 31
322 Iraq 12414 A 31 31
323 Iraq 12415 C 31 31
324 Iraq 12416 A 31 31
325 Iraq 12417 A 31 31
326 Iraq 12418 T 31 31
327 Iraq 12419 G 31 31
328 Iraq 12420 C 31 31
329 Iraq 12421 A 31 31
330 Iraq 12422 A 31 31
331 Iraq 12423 G 31 31
332 Iraq 12424 A 31 31
333 Iraq 12425 G 31 31
334 Iraq 12426 A 31 31
335 Iraq 12427 T 31 31
336 Iraq 12428 G 31 31
337 Iraq 12429 G 31 31
338 Iraq 12430 T 31 31
339 Iraq 12431 T 31 31
340 Iraq 12432 G 31 31
341 Iraq 12433 T 31 31
342 Iraq 12434 G 31 31
343 Iraq 12435 T 31 31
344 Iraq 12436 T 31 31
345 Iraq 12437 C 31 31
346 Iraq 12438 C 31 31
347 Iraq 12439 C 31 31
348 Iraq 12440 T 31 31
349 Iraq 12441 T 31 31
350 Iraq 12442 G 31 31
351 Iraq 12443 A 31 31
352 Iraq 12444 A 31 31
353 Iraq 12445 C 31 31
354 Iraq 12446 A 31 31
355 Iraq 12447 T 31 31
356 Iraq 12448 A 31 31
357 Iraq 12449 A 31 31
358 Iraq 12450 T 31 31
359 Iraq 12451 A 31 31
360 Iraq 12452 C 31 31
361 Iraq 12453 C 31 31
362 Iraq 12454 T 31 31
363 Iraq 12455 C 31 31
364 Iraq 12456 T 31 31
365 Iraq 12457 T 31 31
366 Iraq 12458 A 31 31
367 Iraq 12459 C 31 31
368 Iraq 12460 A 31 31
369 Iraq 12461 A 31 31
370 Iraq 12462 C 31 31
371 Iraq 12463 A 31 31
372 Iraq 12464 G 31 31
373 Iraq 12465 C 31 31
374 Iraq 12466 A 31 31
375 Iraq 12467 G 31 31
376 Iraq 12468 C 31 31
377 Iraq 12469 C 31 31
378 Iraq 12470 A 31 31
379 Iraq 12471 A 31 31
380 Iraq 12472 A 31 31
381 Iraq 12473 C 31 31
382 Iraq 12474 T 31 31
383 Iraq 12475 A 31 31
384 Iraq 12476 A 31 31
385 Iraq 12477 T 31 31
386 Iraq 12478 G 31 31
387 Iraq 12479 G 31 31
388 Iraq 12480 T 31 31
389 Iraq 12481 T 31 31
390 Iraq 12482 G 31 31
391 Iraq 12483 T 31 31
392 Iraq 12484 C 31 31
393 Iraq 12485 A 31 31
394 Iraq 12486 T 31 31
395 Iraq 12487 A 31 31
396 Iraq 12488 C 31 31
397 Iraq 12489 C 31 31
398 Iraq 12490 A 31 31
399 Iraq 12491 G 31 31
400 Iraq 12492 A 31 31
401 Iraq 12493 C 31 31
402 Iraq 12494 T 31 31
403 Iraq 12495 A 31 31
404 Iraq 12496 T 31 31
405 Iraq 12497 A 31 31
406 Iraq 12498 A 31 31
407 Iraq 12499 C 31 31
408 Iraq 12500 A 31 31
409 Iraq 12501 C 31 31
410 Iraq 12502 A 31 31
411 Iraq 12503 T 31 31
412 Iraq 12504 A 31 31
413 Iraq 12505 T 31 31
414 Iraq 12506 A 31 31
415 Iraq 12507 A 31 31
416 Iraq 12508 A 31 31
417 Iraq 12509 A 31 31
418 Iraq 12510 A 31 31
419 Iraq 12511 T 31 31
420 Iraq 12512 A 31 31
421 Iraq 12513 C 31 31
422 Iraq 12514 G 31 31
423 Iraq 12515 T 31 31
424 Iraq 12516 G 31 31
425 Iraq 12517 T 31 31
426 Iraq 12518 G 31 31
427 Iraq 12519 A 31 31
428 Iraq 12520 T 31 31
429 Iraq 12521 G 31 31
430 Iraq 12522 G 31 31
431 Iraq 12523 T 31 31
432 Iraq 12524 A 31 31
433 Iraq 12525 C 31 31
434 Iraq 12526 A 31 31
435 Iraq 12527 A 31 31
436 Iraq 12528 C 31 31
437 Iraq 12529 A 31 31
438 Iraq 12530 T 31 31
439 Iraq 12531 T 31 31
440 Iraq 12532 T 31 31
441 Iraq 12533 A 31 31
442 Iraq 12534 C 31 31
443 Iraq 12535 T 31 31
444 Iraq 12536 T 31 31
445 Iraq 12537 A 31 31
446 Iraq 12538 T 31 31
447 Iraq 12539 G 31 31
448 Iraq 12540 C 31 31
449 Iraq 12541 A 31 31
450 Iraq 12542 T 31 31
451 Iraq 12543 C 31 31
452 Iraq 12544 A 31 31
453 Iraq 12545 G 31 31
454 Iraq 12546 C 31 31
455 Iraq 12547 A 31 31
456 Iraq 12548 T 31 31
457 Iraq 12549 T 31 31
458 Iraq 12550 G 31 31
459 Iraq 12551 T 31 31
460 Iraq 12552 G 31 31
461 Iraq 12553 G 31 31
462 Iraq 12554 G 31 31
463 Iraq 12555 A 31 31
464 Iraq 12556 A 31 31
465 Iraq 12557 A 31 31
466 Iraq 12558 T 31 31
467 Iraq 12559 C 31 31
468 Iraq 12560 C 31 31
469 Iraq 12561 A 31 31
470 Iraq 12562 A 31 31
471 Iraq 12563 C 31 31
472 Iraq 12564 A 31 31
473 Iraq 12565 G 31 31
474 Iraq 12566 G 31 31
475 Iraq 12567 T 31 31
476 Iraq 12568 T 31 31
477 Iraq 12569 G 31 31
478 Iraq 12570 T 31 31
479 Iraq 12571 A 31 31
480 Iraq 12572 G 31 31
481 Iraq 12573 A 31 31
482 Iraq 12574 T 31 31
483 Iraq 12575 G 31 31
484 Iraq 12576 C 31 31
485 Iraq 12577 A 31 31
486 Iraq 12578 G 31 31
487 Iraq 12579 A 31 31
488 Iraq 12580 T 31 31
489 Iraq 12581 A 31 31
490 Iraq 12582 G 31 31
491 Iraq 12583 T 31 31
492 Iraq 12584 A 31 31
493 Iraq 12585 A 31 31
494 Iraq 12586 A 31 31
495 Iraq 12587 A 31 31
496 Iraq 12588 T 31 31
497 Iraq 12589 T 31 31
498 Iraq 12590 G 31 31
499 Iraq 12591 T 31 31
500 Iraq 12592 T 31 31
501 Iraq 12593 C 31 31
502 Iraq 12594 A 31 31
503 Iraq 12595 A 31 31
504 Iraq 12596 C 31 31
505 Iraq 12597 T 31 31
506 Iraq 12598 T 31 31
507 Iraq 12599 A 31 31
508 Iraq 12600 G 31 31
509 Iraq 12601 T 31 31
510 Iraq 12602 G 31 31
511 Iraq 12603 A 31 31
512 Iraq 12604 A 31 31
513 Iraq 12605 A 31 31
514 Iraq 12606 T 31 31
515 Iraq 12607 T 31 31
516 Iraq 12608 A 31 31
517 Iraq 12609 G 31 31
518 Iraq 12610 T 31 31
519 Iraq 12611 A 31 31
520 Iraq 12612 T 31 31
521 Iraq 12613 G 31 31
522 Iraq 12614 G 31 31
523 Iraq 12615 A 31 31
524 Iraq 12616 C 31 31
525 Iraq 12617 A 31 31
526 Iraq 12618 A 31 31
527 Iraq 12619 T 31 31
528 Iraq 12620 T 31 31
529 Iraq 12621 C 31 31
530 Iraq 12622 A 31 31
531 Iraq 12623 C 31 31
532 Iraq 12624 C 31 31
533 Iraq 12625 T 31 31
534 Iraq 12626 A 31 31
535 Iraq 12627 A 31 31
536 Iraq 12628 T 31 31
537 Iraq 12629 T 31 31
538 Iraq 12630 T 31 31
539 Iraq 12631 A 31 31
540 Iraq 12632 G 31 31
541 Iraq 12633 C 31 31
542 Iraq 12634 A 31 31
543 Iraq 12635 T 31 31
544 Iraq 12636 G 31 31
545 Iraq 12637 G 31 31
546 Iraq 12638 C 31 31
547 Iraq 12639 C 31 31
548 Iraq 12640 T 31 31
549 Iraq 12641 C 31 31
550 Iraq 12642 T 31 31
551 Iraq 12643 T 31 31
552 Iraq 12644 A 31 31
553 Iraq 12645 T 31 31
554 Iraq 12646 T 31 31
555 Iraq 12647 G 31 31
556 Iraq 12648 T 31 31
557 Iraq 12649 A 31 31
558 Iraq 12650 A 31 31
559 Iraq 12651 C 31 31
560 Iraq 12652 A 31 31
561 Iraq 12653 G 31 31
562 Iraq 12654 C 31 31
563 Iraq 12655 T 31 31
564 Iraq 12656 T 31 31
565 Iraq 12657 T 31 31
566 Iraq 12658 A 31 31
567 Iraq 12659 A 31 31
568 Iraq 12660 G 31 31
569 Iraq 12661 G 31 31
570 Iraq 12662 G 31 31
571 Iraq 12663 C 31 31
572 Iraq 12664 C 31 31
573 Iraq 12665 A 31 31
574 Iraq 12666 A 31 31
575 Iraq 12667 T 31 31
576 Iraq 12668 T 31 31
577 Iraq 12669 C 31 31
578 Iraq 12670 T 31 31
579 Iraq 12671 G 31 31
580 Iraq 12672 C 31 31
581 Iraq 12673 T 31 31
582 Iraq 12674 G 31 31
583 Iraq 12675 T 31 31
584 Iraq 12676 C 31 31
585 Iraq 12677 A 31 31
586 Iraq 12678 A 31 31
587 Iraq 12679 A 31 31
588 Iraq 12680 T 31 31
589 Iraq 12681 T 31 31
590 Iraq 12682 A 31 31
591 Iraq 12683 C 31 31
592 Iraq 12684 A 31 31
593 Iraq 12685 G 31 31