National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G I K L M N P Q R S T V W Y
-   594                                      
?                                          
A   84                                      
C   6                                      
D   39                                      
E   27                                      
F   15                                      
G   9                                      
I   30                                      
K   45                                      
L   54         1                            
M   27                                      
N   39                                      
P   18                       1              
Q   33                                      
R   21                                      
S   45                     1       1        
T   39                   1           1      
V   39                                      
W   6                                      
Y   18                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Hungary 12092 G 278 278
1 Hungary 12093 C 278 278
2 Hungary 12094 T 278 278
3 Hungary 12095 A 278 278
4 Hungary 12096 T 278 278
5 Hungary 12097 A 278 278
6 Hungary 12098 G 278 278
7 Hungary 12099 C 278 278
8 Hungary 12100 C 278 278
9 Hungary 12101 T 278 278
10 Hungary 12102 C 278 278
11 Hungary 12103 A 278 278
12 Hungary 12104 G 278 278
13 Hungary 12105 A 278 278
14 Hungary 12106 G 278 278
15 Hungary 12107 T 278 278
16 Hungary 12108 T 278 278
17 Hungary 12109 T 278 278
18 Hungary 12110 A 278 278
19 Hungary 12111 G A 278 277 Ser3949Asn
20 Hungary 12112 T 278 278
21 Hungary 12113 T 278 278
22 Hungary 12114 C 278 278
23 Hungary 12115 C 278 278
24 Hungary 12116 C T 278 277 Leu3951Phe
25 Hungary 12117 T 278 278
26 Hungary 12118 T 278 278
27 Hungary 12119 C 278 278
28 Hungary 12120 C 278 278
29 Hungary 12121 A 278 278
30 Hungary 12122 T 278 278
31 Hungary 12123 C 278 278
32 Hungary 12124 A G 278 277 Ser3953Ser
33 Hungary 12125 T 278 278
34 Hungary 12126 A 278 278
35 Hungary 12127 T 278 278
36 Hungary 12128 G 278 278
37 Hungary 12129 C 278 278
38 Hungary 12130 A 278 278
39 Hungary 12131 G 278 278
40 Hungary 12132 C 278 278
41 Hungary 12133 T 278 278
42 Hungary 12134 T 278 278
43 Hungary 12135 T 278 278
44 Hungary 12136 T 278 278
45 Hungary 12137 G 278 278
46 Hungary 12138 C 278 278
47 Hungary 12139 T 278 278
48 Hungary 12140 A 278 278
49 Hungary 12141 C 278 278
50 Hungary 12142 T 278 278
51 Hungary 12143 G 278 278
52 Hungary 12144 C 278 278
53 Hungary 12145 T 278 278
54 Hungary 12146 C 278 278
55 Hungary 12147 A 278 278
56 Hungary 12148 A 278 278
57 Hungary 12149 G 278 278
58 Hungary 12150 A 278 278
59 Hungary 12151 A 278 278
60 Hungary 12152 G 278 278
61 Hungary 12153 C 278 278
62 Hungary 12154 T 278 278
63 Hungary 12155 T 278 278
64 Hungary 12156 A 278 278
65 Hungary 12157 T 278 278
66 Hungary 12158 G 278 278
67 Hungary 12159 A 278 278
68 Hungary 12160 G 278 278
69 Hungary 12161 C 278 278
70 Hungary 12162 A 278 278
71 Hungary 12163 G 278 278
72 Hungary 12164 G 278 278
73 Hungary 12165 C 278 278
74 Hungary 12166 T 278 278
75 Hungary 12167 G 278 278
76 Hungary 12168 T 278 278
77 Hungary 12169 T 278 278
78 Hungary 12170 G 278 278
79 Hungary 12171 C 278 278
80 Hungary 12172 T 278 278
81 Hungary 12173 A 278 278
82 Hungary 12174 A 278 278
83 Hungary 12175 T 278 278
84 Hungary 12176 G 278 278
85 Hungary 12177 G 278 278
86 Hungary 12178 T 278 278
87 Hungary 12179 G 278 278
88 Hungary 12180 A 278 278
89 Hungary 12181 T 278 278
90 Hungary 12182 T 278 278
91 Hungary 12183 C 278 278
92 Hungary 12184 T 278 278
93 Hungary 12185 G 278 278
94 Hungary 12186 A 278 278
95 Hungary 12187 A 278 278
96 Hungary 12188 G 278 278
97 Hungary 12189 T 278 278
98 Hungary 12190 T 278 278
99 Hungary 12191 G 278 278
100 Hungary 12192 T 278 278
101 Hungary 12193 T 278 278
102 Hungary 12194 C 278 278
103 Hungary 12195 T 278 278
104 Hungary 12196 T 278 278
105 Hungary 12197 A 278 278
106 Hungary 12198 A 278 278
107 Hungary 12199 A 278 278
108 Hungary 12200 A 278 278
109 Hungary 12201 A 278 278
110 Hungary 12202 G 278 278
111 Hungary 12203 T 278 278
112 Hungary 12204 T 278 278
113 Hungary 12205 G 278 278
114 Hungary 12206 A 278 278
115 Hungary 12207 A 278 278
116 Hungary 12208 G 278 278
117 Hungary 12209 A 278 278
118 Hungary 12210 A 278 278
119 Hungary 12211 G 278 278
120 Hungary 12212 T 278 278
121 Hungary 12213 C 278 278
122 Hungary 12214 T 278 278
123 Hungary 12215 T 278 278
124 Hungary 12216 T 278 278
125 Hungary 12217 G 278 278
126 Hungary 12218 A 278 278
127 Hungary 12219 A 278 278
128 Hungary 12220 T 278 278
129 Hungary 12221 G 278 278
130 Hungary 12222 T 278 278
131 Hungary 12223 G 278 278
132 Hungary 12224 G 278 278
133 Hungary 12225 C 278 278
134 Hungary 12226 T 278 278
135 Hungary 12227 A 278 278
136 Hungary 12228 A 278 278
137 Hungary 12229 A 278 278
138 Hungary 12230 T 278 278
139 Hungary 12231 C 278 278
140 Hungary 12232 T 278 278
141 Hungary 12233 G 278 278
142 Hungary 12234 A 278 278
143 Hungary 12235 A 278 278
144 Hungary 12236 T 278 278
145 Hungary 12237 T 278 278
146 Hungary 12238 T 278 278
147 Hungary 12239 G 278 278
148 Hungary 12240 A 278 278
149 Hungary 12241 C 278 278
150 Hungary 12242 C 278 278
151 Hungary 12243 G 278 278
152 Hungary 12244 T 278 278
153 Hungary 12245 G 278 278
154 Hungary 12246 A 278 278
155 Hungary 12247 T 278 278
156 Hungary 12248 G 278 278
157 Hungary 12249 C 278 278
158 Hungary 12250 A 278 278
159 Hungary 12251 G 278 278
160 Hungary 12252 C 278 278
161 Hungary 12253 C 278 278
162 Hungary 12254 A 278 278
163 Hungary 12255 T 278 278
164 Hungary 12256 G 278 278
165 Hungary 12257 C 278 278
166 Hungary 12258 A 278 278
167 Hungary 12259 A 278 278
168 Hungary 12260 C 278 278
169 Hungary 12261 G 278 278
170 Hungary 12262 T 278 278
171 Hungary 12263 A 278 278
172 Hungary 12264 A 278 278
173 Hungary 12265 G 278 278
174 Hungary 12266 T 278 278
175 Hungary 12267 T 278 278
176 Hungary 12268 G 278 278
177 Hungary 12269 G 278 278
178 Hungary 12270 A 278 278
179 Hungary 12271 A 278 278
180 Hungary 12272 A 278 278
181 Hungary 12273 A 278 278
182 Hungary 12274 G 278 278
183 Hungary 12275 A 278 278
184 Hungary 12276 T 278 278
185 Hungary 12277 G 278 278
186 Hungary 12278 G 278 278
187 Hungary 12279 C 278 278
188 Hungary 12280 T 278 278
189 Hungary 12281 G 278 278
190 Hungary 12282 A 278 278
191 Hungary 12283 T 278 278
192 Hungary 12284 C 278 278
193 Hungary 12285 A 278 278
194 Hungary 12286 A 278 278
195 Hungary 12287 G 278 278
196 Hungary 12288 C 278 278
197 Hungary 12289 T 278 278
198 Hungary 12290 A 278 278
199 Hungary 12291 T 278 278
200 Hungary 12292 G 278 278
201 Hungary 12293 A 278 278
202 Hungary 12294 C 278 278
203 Hungary 12295 C 278 278
204 Hungary 12296 C 278 278
205 Hungary 12297 A 278 278
206 Hungary 12298 A 278 278
207 Hungary 12299 A 278 278
208 Hungary 12300 T 278 278
209 Hungary 12301 G 278 278
210 Hungary 12302 T 278 278
211 Hungary 12303 A 278 278
212 Hungary 12304 T 278 278
213 Hungary 12305 A 278 278
214 Hungary 12306 A 278 278
215 Hungary 12307 A 278 278
216 Hungary 12308 C 278 278
217 Hungary 12309 A 278 278
218 Hungary 12310 G 278 278
219 Hungary 12311 G 278 278
220 Hungary 12312 C 278 278
221 Hungary 12313 T 278 278
222 Hungary 12314 A 278 278
223 Hungary 12315 G 278 278
224 Hungary 12316 A 278 278
225 Hungary 12317 T 278 278
226 Hungary 12318 C 278 278
227 Hungary 12319 T 278 278
228 Hungary 12320 G 278 278
229 Hungary 12321 A 278 278
230 Hungary 12322 G 278 278
231 Hungary 12323 G 278 278
232 Hungary 12324 A 278 278
233 Hungary 12325 C 278 278
234 Hungary 12326 A 278 278
235 Hungary 12327 A 278 278
236 Hungary 12328 G 278 278
237 Hungary 12329 A 278 278
238 Hungary 12330 G 278 278
239 Hungary 12331 G 278 278
240 Hungary 12332 G 278 278
241 Hungary 12333 C 278 278
242 Hungary 12334 A 278 278
243 Hungary 12335 A 278 278
244 Hungary 12336 A 278 278
245 Hungary 12337 A 278 278
246 Hungary 12338 G 278 278
247 Hungary 12339 T 278 278
248 Hungary 12340 T 278 278
249 Hungary 12341 A 278 278
250 Hungary 12342 C 278 278
251 Hungary 12343 T 278 278
252 Hungary 12344 A 278 278
253 Hungary 12345 G 278 278
254 Hungary 12346 T 278 278
255 Hungary 12347 G 278 278
256 Hungary 12348 C 278 278
257 Hungary 12349 T 278 278
258 Hungary 12350 A 278 278
259 Hungary 12351 T 278 278
260 Hungary 12352 G 278 278
261 Hungary 12353 C 278 278
262 Hungary 12354 A 278 278
263 Hungary 12355 G 278 278
264 Hungary 12356 A 278 278
265 Hungary 12357 C 278 278
266 Hungary 12358 A 278 278
267 Hungary 12359 A 278 278
268 Hungary 12360 T 278 278
269 Hungary 12361 G 278 278
270 Hungary 12362 C 278 278
271 Hungary 12363 T 278 278
272 Hungary 12364 T 278 278
273 Hungary 12365 T 278 278
274 Hungary 12366 T 278 278
275 Hungary 12367 C 278 278
276 Hungary 12368 A 278 278
277 Hungary 12369 C 278 278
278 Hungary 12370 T 278 278
279 Hungary 12371 A 278 278
280 Hungary 12372 T 278 278
281 Hungary 12373 G 278 278
282 Hungary 12374 C 278 278
283 Hungary 12375 T 278 278
284 Hungary 12376 T 278 278
285 Hungary 12377 A 278 278
286 Hungary 12378 G 278 278
287 Hungary 12379 A 278 278
288 Hungary 12380 A 278 278
289 Hungary 12381 A 278 278
290 Hungary 12382 G 278 278
291 Hungary 12383 T 278 278
292 Hungary 12384 T 278 278
293 Hungary 12385 G 278 278
294 Hungary 12386 G 278 278
295 Hungary 12387 A 278 278
296 Hungary 12388 T 278 278
297 Hungary 12389 A 278 278
298 Hungary 12390 A 278 278
299 Hungary 12391 T 278 278
300 Hungary 12392 G 278 278
301 Hungary 12393 A 278 278
302 Hungary 12394 T 278 278
303 Hungary 12395 G 278 278
304 Hungary 12396 C 278 278
305 Hungary 12397 A 278 278
306 Hungary 12398 C 278 278
307 Hungary 12399 T 278 278
308 Hungary 12400 C 278 278
309 Hungary 12401 A 278 278
310 Hungary 12402 A 278 278
311 Hungary 12403 C 278 278
312 Hungary 12404 A 278 278
313 Hungary 12405 A 278 278
314 Hungary 12406 C 278 278
315 Hungary 12407 A 278 278
316 Hungary 12408 T 278 278
317 Hungary 12409 T 278 278
318 Hungary 12410 A 278 278
319 Hungary 12411 T 278 278
320 Hungary 12412 C 278 278
321 Hungary 12413 A 278 278
322 Hungary 12414 A 278 278
323 Hungary 12415 C 278 278
324 Hungary 12416 A 278 278
325 Hungary 12417 A 278 278
326 Hungary 12418 T 278 278
327 Hungary 12419 G 278 278
328 Hungary 12420 C 278 278
329 Hungary 12421 A 278 278
330 Hungary 12422 A 278 278
331 Hungary 12423 G 278 278
332 Hungary 12424 A 278 278
333 Hungary 12425 G 278 278
334 Hungary 12426 A 278 278
335 Hungary 12427 T 278 278
336 Hungary 12428 G 278 278
337 Hungary 12429 G 278 278
338 Hungary 12430 T 278 278
339 Hungary 12431 T 278 278
340 Hungary 12432 G 278 278
341 Hungary 12433 T 278 278
342 Hungary 12434 G 278 278
343 Hungary 12435 T 278 278
344 Hungary 12436 T 278 278
345 Hungary 12437 C 278 278
346 Hungary 12438 C 278 278
347 Hungary 12439 C T 278 277 Pro4058Pro
348 Hungary 12440 T 278 278
349 Hungary 12441 T 278 278
350 Hungary 12442 G 278 278
351 Hungary 12443 A 278 278
352 Hungary 12444 A 278 278
353 Hungary 12445 C 278 278
354 Hungary 12446 A 278 278
355 Hungary 12447 T 278 278
356 Hungary 12448 A 278 278
357 Hungary 12449 A 278 278
358 Hungary 12450 T 278 278
359 Hungary 12451 A 278 278
360 Hungary 12452 C 278 278
361 Hungary 12453 C 278 278
362 Hungary 12454 T 278 278
363 Hungary 12455 C 278 278
364 Hungary 12456 T 278 278
365 Hungary 12457 T 278 278
366 Hungary 12458 A 278 278
367 Hungary 12459 C 278 278
368 Hungary 12460 A 278 278
369 Hungary 12461 A 278 278
370 Hungary 12462 C 278 278
371 Hungary 12463 A 278 278
372 Hungary 12464 G 278 278
373 Hungary 12465 C 278 278
374 Hungary 12466 A 278 278
375 Hungary 12467 G 278 278
376 Hungary 12468 C 278 278
377 Hungary 12469 C 278 278
378 Hungary 12470 A 278 278
379 Hungary 12471 A 278 278
380 Hungary 12472 A 278 278
381 Hungary 12473 C 278 278
382 Hungary 12474 T 278 278
383 Hungary 12475 A 278 278
384 Hungary 12476 A 278 278
385 Hungary 12477 T 278 278
386 Hungary 12478 G 278 278
387 Hungary 12479 G 278 278
388 Hungary 12480 T 278 278
389 Hungary 12481 T 278 278
390 Hungary 12482 G 278 278
391 Hungary 12483 T 278 278
392 Hungary 12484 C 278 278
393 Hungary 12485 A 278 278
394 Hungary 12486 T 278 278
395 Hungary 12487 A 278 278
396 Hungary 12488 C 278 278
397 Hungary 12489 C 278 278
398 Hungary 12490 A 278 278
399 Hungary 12491 G 278 278
400 Hungary 12492 A 278 278
401 Hungary 12493 C 278 278
402 Hungary 12494 T 278 278
403 Hungary 12495 A 278 278
404 Hungary 12496 T 278 278
405 Hungary 12497 A 278 278
406 Hungary 12498 A 278 278
407 Hungary 12499 C 278 278
408 Hungary 12500 A 278 278
409 Hungary 12501 C 278 278
410 Hungary 12502 A 278 278
411 Hungary 12503 T 278 278
412 Hungary 12504 A 278 278
413 Hungary 12505 T 278 278
414 Hungary 12506 A 278 278
415 Hungary 12507 A 278 278
416 Hungary 12508 A 278 278
417 Hungary 12509 A 278 278
418 Hungary 12510 A 278 278
419 Hungary 12511 T 278 278
420 Hungary 12512 A 278 278
421 Hungary 12513 C T 278 272 Thr4083Met
422 Hungary 12514 G A 278 277 Thr4083Thr
423 Hungary 12515 T 278 278
424 Hungary 12516 G 278 278
425 Hungary 12517 T 278 278
426 Hungary 12518 G 278 278
427 Hungary 12519 A 278 278
428 Hungary 12520 T 278 278
429 Hungary 12521 G 278 278
430 Hungary 12522 G 278 278
431 Hungary 12523 T 278 278
432 Hungary 12524 A 278 278
433 Hungary 12525 C 278 278
434 Hungary 12526 A 278 278
435 Hungary 12527 A 278 278
436 Hungary 12528 C 278 278
437 Hungary 12529 A 278 278
438 Hungary 12530 T 278 278
439 Hungary 12531 T 278 278
440 Hungary 12532 T 278 278
441 Hungary 12533 A 278 278
442 Hungary 12534 C 278 278
443 Hungary 12535 T 278 278
444 Hungary 12536 T 278 278
445 Hungary 12537 A 278 278
446 Hungary 12538 T 278 278
447 Hungary 12539 G 278 278
448 Hungary 12540 C 278 278
449 Hungary 12541 A 278 278
450 Hungary 12542 T 278 278
451 Hungary 12543 C 278 278
452 Hungary 12544 A 278 278
453 Hungary 12545 G 278 278
454 Hungary 12546 C 278 278
455 Hungary 12547 A 278 278
456 Hungary 12548 T 278 278
457 Hungary 12549 T 278 278
458 Hungary 12550 G 278 278
459 Hungary 12551 T 278 278
460 Hungary 12552 G 278 278
461 Hungary 12553 G 278 278
462 Hungary 12554 G 278 278
463 Hungary 12555 A 278 278
464 Hungary 12556 A 278 278
465 Hungary 12557 A 278 278
466 Hungary 12558 T 278 278
467 Hungary 12559 C 278 278
468 Hungary 12560 C 278 278
469 Hungary 12561 A 278 278
470 Hungary 12562 A 278 278
471 Hungary 12563 C 278 278
472 Hungary 12564 A 278 278
473 Hungary 12565 G 278 278
474 Hungary 12566 G 278 278
475 Hungary 12567 T 278 278
476 Hungary 12568 T 278 278
477 Hungary 12569 G 278 278
478 Hungary 12570 T 278 278
479 Hungary 12571 A 278 278
480 Hungary 12572 G 278 278
481 Hungary 12573 A 278 278
482 Hungary 12574 T 278 278
483 Hungary 12575 G 278 278
484 Hungary 12576 C 278 278
485 Hungary 12577 A 278 278
486 Hungary 12578 G 278 278
487 Hungary 12579 A 278 278
488 Hungary 12580 T 278 278
489 Hungary 12581 A 278 278
490 Hungary 12582 G 278 278
491 Hungary 12583 T 278 278
492 Hungary 12584 A 278 278
493 Hungary 12585 A 278 278
494 Hungary 12586 A 278 278
495 Hungary 12587 A 278 278
496 Hungary 12588 T 278 278
497 Hungary 12589 T 278 278
498 Hungary 12590 G 278 278
499 Hungary 12591 T 278 278
500 Hungary 12592 T 278 278
501 Hungary 12593 C 278 278
502 Hungary 12594 A 278 278
503 Hungary 12595 A 278 278
504 Hungary 12596 C 278 278
505 Hungary 12597 T 278 278
506 Hungary 12598 T 278 278
507 Hungary 12599 A 278 278
508 Hungary 12600 G 278 278
509 Hungary 12601 T 278 278
510 Hungary 12602 G 278 278
511 Hungary 12603 A 278 278
512 Hungary 12604 A 278 278
513 Hungary 12605 A 278 278
514 Hungary 12606 T 278 278
515 Hungary 12607 T 278 278
516 Hungary 12608 A 278 278
517 Hungary 12609 G 278 278
518 Hungary 12610 T 278 278
519 Hungary 12611 A 278 278
520 Hungary 12612 T 278 278
521 Hungary 12613 G 278 278
522 Hungary 12614 G 278 278
523 Hungary 12615 A 278 278
524 Hungary 12616 C 278 278
525 Hungary 12617 A 278 278
526 Hungary 12618 A 278 278
527 Hungary 12619 T 278 278
528 Hungary 12620 T 278 278
529 Hungary 12621 C 278 278
530 Hungary 12622 A 278 278
531 Hungary 12623 C 278 278
532 Hungary 12624 C 278 278
533 Hungary 12625 T 278 278
534 Hungary 12626 A 278 278
535 Hungary 12627 A 278 278
536 Hungary 12628 T 278 278
537 Hungary 12629 T 278 278
538 Hungary 12630 T 278 278
539 Hungary 12631 A 278 278
540 Hungary 12632 G 278 278
541 Hungary 12633 C 278 278
542 Hungary 12634 A 278 278
543 Hungary 12635 T 278 278
544 Hungary 12636 G 278 278
545 Hungary 12637 G 278 278
546 Hungary 12638 C 278 278
547 Hungary 12639 C 278 278
548 Hungary 12640 T 278 278
549 Hungary 12641 C 278 278
550 Hungary 12642 T 278 278
551 Hungary 12643 T 278 278
552 Hungary 12644 A 278 278
553 Hungary 12645 T 278 278
554 Hungary 12646 T 278 278
555 Hungary 12647 G 278 278
556 Hungary 12648 T 278 278
557 Hungary 12649 A 278 278
558 Hungary 12650 A 278 278
559 Hungary 12651 C 278 278
560 Hungary 12652 A 278 278
561 Hungary 12653 G 278 278
562 Hungary 12654 C 278 278
563 Hungary 12655 T 278 278
564 Hungary 12656 T 278 278
565 Hungary 12657 T 278 278
566 Hungary 12658 A 278 278
567 Hungary 12659 A 278 278
568 Hungary 12660 G 278 278
569 Hungary 12661 G 278 278
570 Hungary 12662 G 278 278
571 Hungary 12663 C 278 278
572 Hungary 12664 C 278 278
573 Hungary 12665 A 278 278
574 Hungary 12666 A 278 278
575 Hungary 12667 T 278 278
576 Hungary 12668 T 278 278
577 Hungary 12669 C 278 278
578 Hungary 12670 T 278 278
579 Hungary 12671 G 278 278
580 Hungary 12672 C 278 278
581 Hungary 12673 T 278 278
582 Hungary 12674 G 278 278
583 Hungary 12675 T 278 278
584 Hungary 12676 C 278 278
585 Hungary 12677 A 278 278
586 Hungary 12678 A 278 278
587 Hungary 12679 A 278 278
588 Hungary 12680 T 278 278
589 Hungary 12681 T 278 278
590 Hungary 12682 A 278 278
591 Hungary 12683 C 278 278
592 Hungary 12684 A 278 278
593 Hungary 12685 G 278 278