National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G I K L M N P Q R S T V W Y
-   594                                      
?                                          
A   84 3                               2    
C   6                                      
D   39                                      
E   27     1                                
F   15                                      
G   9                                      
I   30                                      
K   45                                      
L   54                                      
M   27             1                 1      
N   39                     2                
P   18                       1              
Q   33                                      
R   21   1                       1 1        
S   45         2                            
T   39             1                        
V   39         1                            
W   6                                      
Y   18                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Finland 12092 G 995 995
1 Finland 12093 C 995 995
2 Finland 12094 T 995 995
3 Finland 12095 A 995 995
4 Finland 12096 T 995 995
5 Finland 12097 A 995 995
6 Finland 12098 G 995 995
7 Finland 12099 C 995 995
8 Finland 12100 C 995 995
9 Finland 12101 T 995 995
10 Finland 12102 C 995 995
11 Finland 12103 A 995 995
12 Finland 12104 G 995 995
13 Finland 12105 A 995 995
14 Finland 12106 G T 995 994 Glu3947Asp
15 Finland 12107 T 995 995
16 Finland 12108 T 995 995
17 Finland 12109 T 995 995
18 Finland 12110 A 995 995
19 Finland 12111 G 995 995
20 Finland 12112 T 995 995
21 Finland 12113 T 995 995
22 Finland 12114 C 995 995
23 Finland 12115 C 995 995
24 Finland 12116 C 995 995
25 Finland 12117 T 995 995
26 Finland 12118 T 995 995
27 Finland 12119 C 995 995
28 Finland 12120 C 995 995
29 Finland 12121 A 995 995
30 Finland 12122 T 995 995
31 Finland 12123 C 995 995
32 Finland 12124 A 995 995
33 Finland 12125 T 995 995
34 Finland 12126 A 995 995
35 Finland 12127 T 995 995
36 Finland 12128 G 995 995
37 Finland 12129 C 995 995
38 Finland 12130 A 995 995
39 Finland 12131 G 995 995
40 Finland 12132 C 995 995
41 Finland 12133 T 995 995
42 Finland 12134 T 995 995
43 Finland 12135 T 995 995
44 Finland 12136 T 995 995
45 Finland 12137 G 995 995
46 Finland 12138 C T 995 993 Ala3958Val
47 Finland 12139 T C 995 994 Ala3958Ala
48 Finland 12140 A 995 995
49 Finland 12141 C 995 995
50 Finland 12142 T 995 995
51 Finland 12143 G 995 995
52 Finland 12144 C 995 995
53 Finland 12145 T 995 995
54 Finland 12146 C 995 995
55 Finland 12147 A 995 995
56 Finland 12148 A 995 995
57 Finland 12149 G 995 995
58 Finland 12150 A 995 995
59 Finland 12151 A 995 995
60 Finland 12152 G 995 995
61 Finland 12153 C T 995 993 Ala3963Val
62 Finland 12154 T 995 995
63 Finland 12155 T 995 995
64 Finland 12156 A 995 995
65 Finland 12157 T 995 995
66 Finland 12158 G 995 995
67 Finland 12159 A 995 995
68 Finland 12160 G 995 995
69 Finland 12161 C 995 995
70 Finland 12162 A 995 995
71 Finland 12163 G 995 995
72 Finland 12164 G 995 995
73 Finland 12165 C 995 995
74 Finland 12166 T 995 995
75 Finland 12167 G 995 995
76 Finland 12168 T 995 995
77 Finland 12169 T 995 995
78 Finland 12170 G 995 995
79 Finland 12171 C 995 995
80 Finland 12172 T 995 995
81 Finland 12173 A 995 995
82 Finland 12174 A 995 995
83 Finland 12175 T 995 995
84 Finland 12176 G 995 995
85 Finland 12177 G 995 995
86 Finland 12178 T 995 995
87 Finland 12179 G 995 995
88 Finland 12180 A 995 995
89 Finland 12181 T 995 995
90 Finland 12182 T 995 995
91 Finland 12183 C 995 995
92 Finland 12184 T 995 995
93 Finland 12185 G 995 995
94 Finland 12186 A 995 995
95 Finland 12187 A 995 995
96 Finland 12188 G 995 995
97 Finland 12189 T 995 995
98 Finland 12190 T 995 995
99 Finland 12191 G T 995 992 Val3976Phe
100 Finland 12192 T 995 995
101 Finland 12193 T 995 995
102 Finland 12194 C 995 995
103 Finland 12195 T 995 995
104 Finland 12196 T 995 995
105 Finland 12197 A 995 995
106 Finland 12198 A 995 995
107 Finland 12199 A 995 995
108 Finland 12200 A 995 995
109 Finland 12201 A 995 995
110 Finland 12202 G 995 995
111 Finland 12203 T 995 995
112 Finland 12204 T 995 995
113 Finland 12205 G 995 995
114 Finland 12206 A 995 995
115 Finland 12207 A 995 995
116 Finland 12208 G 995 995
117 Finland 12209 A 995 995
118 Finland 12210 A 995 995
119 Finland 12211 G 995 995
120 Finland 12212 T 995 995
121 Finland 12213 C T 995 994 Ser3983Phe
122 Finland 12214 T 995 995
123 Finland 12215 T 995 995
124 Finland 12216 T 995 995
125 Finland 12217 G 995 995
126 Finland 12218 A 995 995
127 Finland 12219 A 995 995
128 Finland 12220 T 995 995
129 Finland 12221 G 995 995
130 Finland 12222 T 995 995
131 Finland 12223 G 995 995
132 Finland 12224 G 995 995
133 Finland 12225 C 995 995
134 Finland 12226 T 995 995
135 Finland 12227 A 995 995
136 Finland 12228 A 995 995
137 Finland 12229 A 995 995
138 Finland 12230 T 995 995
139 Finland 12231 C T 995 994 Ser3989Phe
140 Finland 12232 T 995 995
141 Finland 12233 G 995 995
142 Finland 12234 A 995 995
143 Finland 12235 A 995 995
144 Finland 12236 T 995 995
145 Finland 12237 T 995 995
146 Finland 12238 T 995 995
147 Finland 12239 G 995 995
148 Finland 12240 A 995 995
149 Finland 12241 C 995 995
150 Finland 12242 C T,A 995 993 Arg3993Cys-p.Arg3993Ser
151 Finland 12243 G 995 995
152 Finland 12244 T 995 995
153 Finland 12245 G 995 995
154 Finland 12246 A 995 995
155 Finland 12247 T 995 995
156 Finland 12248 G 995 995
157 Finland 12249 C 995 995
158 Finland 12250 A T 995 993 Ala3995Ala
159 Finland 12251 G 995 995
160 Finland 12252 C 995 995
161 Finland 12253 C 995 995
162 Finland 12254 A 995 995
163 Finland 12255 T 995 995
164 Finland 12256 G 995 995
165 Finland 12257 C 995 995
166 Finland 12258 A 995 995
167 Finland 12259 A 995 995
168 Finland 12260 C 995 995
169 Finland 12261 G 995 995
170 Finland 12262 T 995 995
171 Finland 12263 A 995 995
172 Finland 12264 A 995 995
173 Finland 12265 G 995 995
174 Finland 12266 T 995 995
175 Finland 12267 T 995 995
176 Finland 12268 G 995 995
177 Finland 12269 G 995 995
178 Finland 12270 A 995 995
179 Finland 12271 A 995 995
180 Finland 12272 A 995 995
181 Finland 12273 A 995 995
182 Finland 12274 G 995 995
183 Finland 12275 A 995 995
184 Finland 12276 T 995 995
185 Finland 12277 G 995 995
186 Finland 12278 G 995 995
187 Finland 12279 C 995 995
188 Finland 12280 T 995 995
189 Finland 12281 G 995 995
190 Finland 12282 A 995 995
191 Finland 12283 T 995 995
192 Finland 12284 C 995 995
193 Finland 12285 A 995 995
194 Finland 12286 A 995 995
195 Finland 12287 G 995 995
196 Finland 12288 C 995 995
197 Finland 12289 T 995 995
198 Finland 12290 A 995 995
199 Finland 12291 T 995 995
200 Finland 12292 G T 995 994 Met4009Ile
201 Finland 12293 A 995 995
202 Finland 12294 C 995 995
203 Finland 12295 C 995 995
204 Finland 12296 C 995 995
205 Finland 12297 A 995 995
206 Finland 12298 A 995 995
207 Finland 12299 A 995 995
208 Finland 12300 T 995 995
209 Finland 12301 G 995 995
210 Finland 12302 T 995 995
211 Finland 12303 A 995 995
212 Finland 12304 T 995 995
213 Finland 12305 A 995 995
214 Finland 12306 A 995 995
215 Finland 12307 A 995 995
216 Finland 12308 C 995 995
217 Finland 12309 A 995 995
218 Finland 12310 G 995 995
219 Finland 12311 G 995 995
220 Finland 12312 C 995 995
221 Finland 12313 T 995 995
222 Finland 12314 A 995 995
223 Finland 12315 G 995 995
224 Finland 12316 A G 995 994 Arg4017Arg
225 Finland 12317 T 995 995
226 Finland 12318 C 995 995
227 Finland 12319 T 995 995
228 Finland 12320 G 995 995
229 Finland 12321 A 995 995
230 Finland 12322 G 995 995
231 Finland 12323 G 995 995
232 Finland 12324 A 995 995
233 Finland 12325 C 995 995
234 Finland 12326 A 995 995
235 Finland 12327 A 995 995
236 Finland 12328 G 995 995
237 Finland 12329 A 995 995
238 Finland 12330 G 995 995
239 Finland 12331 G 995 995
240 Finland 12332 G 995 995
241 Finland 12333 C 995 995
242 Finland 12334 A 995 995
243 Finland 12335 A 995 995
244 Finland 12336 A 995 995
245 Finland 12337 A 995 995
246 Finland 12338 G 995 995
247 Finland 12339 T 995 995
248 Finland 12340 T 995 995
249 Finland 12341 A 995 995
250 Finland 12342 C 995 995
251 Finland 12343 T 995 995
252 Finland 12344 A 995 995
253 Finland 12345 G 995 995
254 Finland 12346 T 995 995
255 Finland 12347 G 995 995
256 Finland 12348 C 995 995
257 Finland 12349 T 995 995
258 Finland 12350 A 995 995
259 Finland 12351 T 995 995
260 Finland 12352 G 995 995
261 Finland 12353 C 995 995
262 Finland 12354 A 995 995
263 Finland 12355 G 995 995
264 Finland 12356 A 995 995
265 Finland 12357 C 995 995
266 Finland 12358 A 995 995
267 Finland 12359 A 995 995
268 Finland 12360 T 995 995
269 Finland 12361 G 995 995
270 Finland 12362 C 995 995
271 Finland 12363 T 995 995
272 Finland 12364 T 995 995
273 Finland 12365 T 995 995
274 Finland 12366 T 995 995
275 Finland 12367 C 995 995
276 Finland 12368 A 995 995
277 Finland 12369 C 995 995
278 Finland 12370 T 995 995
279 Finland 12371 A 995 995
280 Finland 12372 T 995 995
281 Finland 12373 G 995 995
282 Finland 12374 C 995 995
283 Finland 12375 T 995 995
284 Finland 12376 T 995 995
285 Finland 12377 A 995 995
286 Finland 12378 G 995 995
287 Finland 12379 A 995 995
288 Finland 12380 A 995 995
289 Finland 12381 A 995 995
290 Finland 12382 G 995 995
291 Finland 12383 T 995 995
292 Finland 12384 T 995 995
293 Finland 12385 G 995 995
294 Finland 12386 G 995 995
295 Finland 12387 A 995 995
296 Finland 12388 T 995 995
297 Finland 12389 A 995 995
298 Finland 12390 A 995 995
299 Finland 12391 T 995 995
300 Finland 12392 G 995 995
301 Finland 12393 A 995 995
302 Finland 12394 T 995 995
303 Finland 12395 G 995 995
304 Finland 12396 C 995 995
305 Finland 12397 A 995 995
306 Finland 12398 C 995 995
307 Finland 12399 T 995 995
308 Finland 12400 C 995 995
309 Finland 12401 A 995 995
310 Finland 12402 A 995 995
311 Finland 12403 C 995 995
312 Finland 12404 A 995 995
313 Finland 12405 A 995 995
314 Finland 12406 C 995 995
315 Finland 12407 A 995 995
316 Finland 12408 T 995 995
317 Finland 12409 T 995 995
318 Finland 12410 A 995 995
319 Finland 12411 T 995 995
320 Finland 12412 C 995 995
321 Finland 12413 A 995 995
322 Finland 12414 A 995 995
323 Finland 12415 C T 995 994 Asn4050Asn
324 Finland 12416 A 995 995
325 Finland 12417 A 995 995
326 Finland 12418 T 995 995
327 Finland 12419 G 995 995
328 Finland 12420 C 995 995
329 Finland 12421 A 995 995
330 Finland 12422 A 995 995
331 Finland 12423 G 995 995
332 Finland 12424 A 995 995
333 Finland 12425 G 995 995
334 Finland 12426 A 995 995
335 Finland 12427 T 995 995
336 Finland 12428 G 995 995
337 Finland 12429 G 995 995
338 Finland 12430 T 995 995
339 Finland 12431 T 995 995
340 Finland 12432 G 995 995
341 Finland 12433 T 995 995
342 Finland 12434 G 995 995
343 Finland 12435 T 995 995
344 Finland 12436 T 995 995
345 Finland 12437 C 995 995
346 Finland 12438 C 995 995
347 Finland 12439 C 995 995
348 Finland 12440 T 995 995
349 Finland 12441 T 995 995
350 Finland 12442 G 995 995
351 Finland 12443 A 995 995
352 Finland 12444 A 995 995
353 Finland 12445 C 995 995
354 Finland 12446 A 995 995
355 Finland 12447 T 995 995
356 Finland 12448 A 995 995
357 Finland 12449 A 995 995
358 Finland 12450 T 995 995
359 Finland 12451 A 995 995
360 Finland 12452 C 995 995
361 Finland 12453 C 995 995
362 Finland 12454 T 995 995
363 Finland 12455 C 995 995
364 Finland 12456 T 995 995
365 Finland 12457 T 995 995
366 Finland 12458 A 995 995
367 Finland 12459 C 995 995
368 Finland 12460 A 995 995
369 Finland 12461 A 995 995
370 Finland 12462 C T 995 993 Thr4066Ile
371 Finland 12463 A 995 995
372 Finland 12464 G 995 995
373 Finland 12465 C 995 995
374 Finland 12466 A 995 995
375 Finland 12467 G 995 995
376 Finland 12468 C 995 995
377 Finland 12469 C 995 995
378 Finland 12470 A 995 995
379 Finland 12471 A 995 995
380 Finland 12472 A 995 995
381 Finland 12473 C 995 995
382 Finland 12474 T 995 995
383 Finland 12475 A 995 995
384 Finland 12476 A 995 995
385 Finland 12477 T 995 995
386 Finland 12478 G 995 995
387 Finland 12479 G 995 995
388 Finland 12480 T 995 995
389 Finland 12481 T 995 995
390 Finland 12482 G 995 995
391 Finland 12483 T 995 995
392 Finland 12484 C 995 995
393 Finland 12485 A 995 995
394 Finland 12486 T 995 995
395 Finland 12487 A 995 995
396 Finland 12488 C 995 995
397 Finland 12489 C 995 995
398 Finland 12490 A G 995 994 Pro4075Pro
399 Finland 12491 G 995 995
400 Finland 12492 A 995 995
401 Finland 12493 C 995 995
402 Finland 12494 T 995 995
403 Finland 12495 A 995 995
404 Finland 12496 T 995 995
405 Finland 12497 A 995 995
406 Finland 12498 A 995 995
407 Finland 12499 C T 995 994 Asn4078Asn
408 Finland 12500 A 995 995
409 Finland 12501 C 995 995
410 Finland 12502 A 995 995
411 Finland 12503 T 995 995
412 Finland 12504 A 995 995
413 Finland 12505 T 995 995
414 Finland 12506 A 995 995
415 Finland 12507 A 995 995
416 Finland 12508 A 995 995
417 Finland 12509 A 995 995
418 Finland 12510 A 995 995
419 Finland 12511 T 995 995
420 Finland 12512 A 995 995
421 Finland 12513 C 995 995
422 Finland 12514 G 995 995
423 Finland 12515 T 995 995
424 Finland 12516 G 995 995
425 Finland 12517 T 995 995
426 Finland 12518 G 995 995
427 Finland 12519 A 995 995
428 Finland 12520 T 995 995
429 Finland 12521 G 995 995
430 Finland 12522 G 995 995
431 Finland 12523 T 995 995
432 Finland 12524 A 995 995
433 Finland 12525 C 995 995
434 Finland 12526 A 995 995
435 Finland 12527 A 995 995
436 Finland 12528 C 995 995
437 Finland 12529 A 995 995
438 Finland 12530 T 995 995
439 Finland 12531 T 995 995
440 Finland 12532 T 995 995
441 Finland 12533 A 995 995
442 Finland 12534 C 995 995
443 Finland 12535 T 995 995
444 Finland 12536 T 995 995
445 Finland 12537 A 995 995
446 Finland 12538 T 995 995
447 Finland 12539 G 995 995
448 Finland 12540 C 995 995
449 Finland 12541 A 995 995
450 Finland 12542 T 995 995
451 Finland 12543 C 995 995
452 Finland 12544 A 995 995
453 Finland 12545 G 995 995
454 Finland 12546 C 995 995
455 Finland 12547 A 995 995
456 Finland 12548 T 995 995
457 Finland 12549 T 995 995
458 Finland 12550 G 995 995
459 Finland 12551 T 995 995
460 Finland 12552 G 995 995
461 Finland 12553 G 995 995
462 Finland 12554 G 995 995
463 Finland 12555 A 995 995
464 Finland 12556 A 995 995
465 Finland 12557 A 995 995
466 Finland 12558 T 995 995
467 Finland 12559 C 995 995
468 Finland 12560 C 995 995
469 Finland 12561 A 995 995
470 Finland 12562 A 995 995
471 Finland 12563 C 995 995
472 Finland 12564 A 995 995
473 Finland 12565 G 995 995
474 Finland 12566 G 995 995
475 Finland 12567 T 995 995
476 Finland 12568 T 995 995
477 Finland 12569 G 995 995
478 Finland 12570 T 995 995
479 Finland 12571 A 995 995
480 Finland 12572 G 995 995
481 Finland 12573 A 995 995
482 Finland 12574 T 995 995
483 Finland 12575 G 995 995
484 Finland 12576 C 995 995
485 Finland 12577 A 995 995
486 Finland 12578 G 995 995
487 Finland 12579 A 995 995
488 Finland 12580 T 995 995
489 Finland 12581 A 995 995
490 Finland 12582 G 995 995
491 Finland 12583 T 995 995
492 Finland 12584 A 995 995
493 Finland 12585 A 995 995
494 Finland 12586 A 995 995
495 Finland 12587 A 995 995
496 Finland 12588 T 995 995
497 Finland 12589 T 995 995
498 Finland 12590 G 995 995
499 Finland 12591 T 995 995
500 Finland 12592 T 995 995
501 Finland 12593 C 995 995
502 Finland 12594 A 995 995
503 Finland 12595 A 995 995
504 Finland 12596 C 995 995
505 Finland 12597 T 995 995
506 Finland 12598 T 995 995
507 Finland 12599 A 995 995
508 Finland 12600 G 995 995
509 Finland 12601 T 995 995
510 Finland 12602 G 995 995
511 Finland 12603 A 995 995
512 Finland 12604 A 995 995
513 Finland 12605 A 995 995
514 Finland 12606 T 995 995
515 Finland 12607 T 995 995
516 Finland 12608 A 995 995
517 Finland 12609 G 995 995
518 Finland 12610 T 995 995
519 Finland 12611 A 995 995
520 Finland 12612 T C 995 994 Met4116Thr
521 Finland 12613 G 995 995
522 Finland 12614 G 995 995
523 Finland 12615 A 995 995
524 Finland 12616 C 995 995
525 Finland 12617 A 995 995
526 Finland 12618 A 995 995
527 Finland 12619 T 995 995
528 Finland 12620 T 995 995
529 Finland 12621 C 995 995
530 Finland 12622 A 995 995
531 Finland 12623 C 995 995
532 Finland 12624 C 995 995
533 Finland 12625 T 995 995
534 Finland 12626 A 995 995
535 Finland 12627 A 995 995
536 Finland 12628 T 995 995
537 Finland 12629 T 995 995
538 Finland 12630 T 995 995
539 Finland 12631 A 995 995
540 Finland 12632 G 995 995
541 Finland 12633 C 995 995
542 Finland 12634 A G 995 988 Ala4123Ala
543 Finland 12635 T 995 995
544 Finland 12636 G 995 995
545 Finland 12637 G 995 995
546 Finland 12638 C 995 995
547 Finland 12639 C 995 995
548 Finland 12640 T 995 995
549 Finland 12641 C 995 995
550 Finland 12642 T 995 995
551 Finland 12643 T 995 995
552 Finland 12644 A 995 995
553 Finland 12645 T 995 995
554 Finland 12646 T 995 995
555 Finland 12647 G 995 995
556 Finland 12648 T 995 995
557 Finland 12649 A 995 995
558 Finland 12650 A 995 995
559 Finland 12651 C 995 995
560 Finland 12652 A 995 995
561 Finland 12653 G 995 995
562 Finland 12654 C 995 995
563 Finland 12655 T 995 995
564 Finland 12656 T 995 995
565 Finland 12657 T 995 995
566 Finland 12658 A 995 995
567 Finland 12659 A 995 995
568 Finland 12660 G 995 995
569 Finland 12661 G 995 995
570 Finland 12662 G 995 995
571 Finland 12663 C 995 995
572 Finland 12664 C 995 995
573 Finland 12665 A 995 995
574 Finland 12666 A 995 995
575 Finland 12667 T 995 995
576 Finland 12668 T 995 995
577 Finland 12669 C 995 995
578 Finland 12670 T 995 995
579 Finland 12671 G 995 995
580 Finland 12672 C 995 995
581 Finland 12673 T 995 995
582 Finland 12674 G 995 995
583 Finland 12675 T 995 995
584 Finland 12676 C 995 995
585 Finland 12677 A 995 995
586 Finland 12678 A 995 995
587 Finland 12679 A 995 995
588 Finland 12680 T 995 995
589 Finland 12681 T 995 995
590 Finland 12682 A 995 995
591 Finland 12683 C 995 995
592 Finland 12684 A 995 995
593 Finland 12685 G 995 995