National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G I K L M N P Q R S T V W Y
-   594                                      
?                                          
A   84                                      
C   6                                      
D   39                                      
E   27                                      
F   15                                      
G   9                                      
I   30                                      
K   45                                      
L   54                                      
M   27                                      
N   39                                      
P   18                                      
Q   33                                      
R   21                                      
S   45                                      
T   39                                      
V   39                                      
W   6                                      
Y   18                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Cuba 12092 G 2 2
1 Cuba 12093 C 2 2
2 Cuba 12094 T 2 2
3 Cuba 12095 A 2 2
4 Cuba 12096 T 2 2
5 Cuba 12097 A 2 2
6 Cuba 12098 G 2 2
7 Cuba 12099 C 2 2
8 Cuba 12100 C 2 2
9 Cuba 12101 T 2 2
10 Cuba 12102 C 2 2
11 Cuba 12103 A 2 2
12 Cuba 12104 G 2 2
13 Cuba 12105 A 2 2
14 Cuba 12106 G 2 2
15 Cuba 12107 T 2 2
16 Cuba 12108 T 2 2
17 Cuba 12109 T 2 2
18 Cuba 12110 A 2 2
19 Cuba 12111 G 2 2
20 Cuba 12112 T 2 2
21 Cuba 12113 T 2 2
22 Cuba 12114 C 2 2
23 Cuba 12115 C 2 2
24 Cuba 12116 C 2 2
25 Cuba 12117 T 2 2
26 Cuba 12118 T 2 2
27 Cuba 12119 C 2 2
28 Cuba 12120 C 2 2
29 Cuba 12121 A 2 2
30 Cuba 12122 T 2 2
31 Cuba 12123 C 2 2
32 Cuba 12124 A 2 2
33 Cuba 12125 T 2 2
34 Cuba 12126 A 2 2
35 Cuba 12127 T 2 2
36 Cuba 12128 G 2 2
37 Cuba 12129 C 2 2
38 Cuba 12130 A 2 2
39 Cuba 12131 G 2 2
40 Cuba 12132 C 2 2
41 Cuba 12133 T 2 2
42 Cuba 12134 T 2 2
43 Cuba 12135 T 2 2
44 Cuba 12136 T 2 2
45 Cuba 12137 G 2 2
46 Cuba 12138 C 2 2
47 Cuba 12139 T 2 2
48 Cuba 12140 A 2 2
49 Cuba 12141 C 2 2
50 Cuba 12142 T 2 2
51 Cuba 12143 G 2 2
52 Cuba 12144 C 2 2
53 Cuba 12145 T 2 2
54 Cuba 12146 C 2 2
55 Cuba 12147 A 2 2
56 Cuba 12148 A 2 2
57 Cuba 12149 G 2 2
58 Cuba 12150 A 2 2
59 Cuba 12151 A 2 2
60 Cuba 12152 G 2 2
61 Cuba 12153 C 2 2
62 Cuba 12154 T 2 2
63 Cuba 12155 T 2 2
64 Cuba 12156 A 2 2
65 Cuba 12157 T 2 2
66 Cuba 12158 G 2 2
67 Cuba 12159 A 2 2
68 Cuba 12160 G 2 2
69 Cuba 12161 C 2 2
70 Cuba 12162 A 2 2
71 Cuba 12163 G 2 2
72 Cuba 12164 G 2 2
73 Cuba 12165 C 2 2
74 Cuba 12166 T 2 2
75 Cuba 12167 G 2 2
76 Cuba 12168 T 2 2
77 Cuba 12169 T 2 2
78 Cuba 12170 G 2 2
79 Cuba 12171 C 2 2
80 Cuba 12172 T 2 2
81 Cuba 12173 A 2 2
82 Cuba 12174 A 2 2
83 Cuba 12175 T 2 2
84 Cuba 12176 G 2 2
85 Cuba 12177 G 2 2
86 Cuba 12178 T 2 2
87 Cuba 12179 G 2 2
88 Cuba 12180 A 2 2
89 Cuba 12181 T 2 2
90 Cuba 12182 T 2 2
91 Cuba 12183 C 2 2
92 Cuba 12184 T 2 2
93 Cuba 12185 G 2 2
94 Cuba 12186 A 2 2
95 Cuba 12187 A 2 2
96 Cuba 12188 G 2 2
97 Cuba 12189 T 2 2
98 Cuba 12190 T 2 2
99 Cuba 12191 G 2 2
100 Cuba 12192 T 2 2
101 Cuba 12193 T 2 2
102 Cuba 12194 C 2 2
103 Cuba 12195 T 2 2
104 Cuba 12196 T 2 2
105 Cuba 12197 A 2 2
106 Cuba 12198 A 2 2
107 Cuba 12199 A 2 2
108 Cuba 12200 A 2 2
109 Cuba 12201 A 2 2
110 Cuba 12202 G 2 2
111 Cuba 12203 T 2 2
112 Cuba 12204 T 2 2
113 Cuba 12205 G 2 2
114 Cuba 12206 A 2 2
115 Cuba 12207 A 2 2
116 Cuba 12208 G 2 2
117 Cuba 12209 A 2 2
118 Cuba 12210 A 2 2
119 Cuba 12211 G 2 2
120 Cuba 12212 T 2 2
121 Cuba 12213 C 2 2
122 Cuba 12214 T 2 2
123 Cuba 12215 T 2 2
124 Cuba 12216 T 2 2
125 Cuba 12217 G 2 2
126 Cuba 12218 A 2 2
127 Cuba 12219 A 2 2
128 Cuba 12220 T 2 2
129 Cuba 12221 G 2 2
130 Cuba 12222 T 2 2
131 Cuba 12223 G 2 2
132 Cuba 12224 G 2 2
133 Cuba 12225 C 2 2
134 Cuba 12226 T 2 2
135 Cuba 12227 A 2 2
136 Cuba 12228 A 2 2
137 Cuba 12229 A 2 2
138 Cuba 12230 T 2 2
139 Cuba 12231 C 2 2
140 Cuba 12232 T 2 2
141 Cuba 12233 G 2 2
142 Cuba 12234 A 2 2
143 Cuba 12235 A 2 2
144 Cuba 12236 T 2 2
145 Cuba 12237 T 2 2
146 Cuba 12238 T 2 2
147 Cuba 12239 G 2 2
148 Cuba 12240 A 2 2
149 Cuba 12241 C 2 2
150 Cuba 12242 C 2 2
151 Cuba 12243 G 2 2
152 Cuba 12244 T 2 2
153 Cuba 12245 G 2 2
154 Cuba 12246 A 2 2
155 Cuba 12247 T 2 2
156 Cuba 12248 G 2 2
157 Cuba 12249 C 2 2
158 Cuba 12250 A 2 2
159 Cuba 12251 G 2 2
160 Cuba 12252 C 2 2
161 Cuba 12253 C 2 2
162 Cuba 12254 A 2 2
163 Cuba 12255 T 2 2
164 Cuba 12256 G 2 2
165 Cuba 12257 C 2 2
166 Cuba 12258 A 2 2
167 Cuba 12259 A 2 2
168 Cuba 12260 C 2 2
169 Cuba 12261 G 2 2
170 Cuba 12262 T 2 2
171 Cuba 12263 A 2 2
172 Cuba 12264 A 2 2
173 Cuba 12265 G 2 2
174 Cuba 12266 T 2 2
175 Cuba 12267 T 2 2
176 Cuba 12268 G 2 2
177 Cuba 12269 G 2 2
178 Cuba 12270 A 2 2
179 Cuba 12271 A 2 2
180 Cuba 12272 A 2 2
181 Cuba 12273 A 2 2
182 Cuba 12274 G 2 2
183 Cuba 12275 A 2 2
184 Cuba 12276 T 2 2
185 Cuba 12277 G 2 2
186 Cuba 12278 G 2 2
187 Cuba 12279 C 2 2
188 Cuba 12280 T 2 2
189 Cuba 12281 G 2 2
190 Cuba 12282 A 2 2
191 Cuba 12283 T 2 2
192 Cuba 12284 C 2 2
193 Cuba 12285 A 2 2
194 Cuba 12286 A 2 2
195 Cuba 12287 G 2 2
196 Cuba 12288 C 2 2
197 Cuba 12289 T 2 2
198 Cuba 12290 A 2 2
199 Cuba 12291 T 2 2
200 Cuba 12292 G 2 2
201 Cuba 12293 A 2 2
202 Cuba 12294 C 2 2
203 Cuba 12295 C 2 2
204 Cuba 12296 C 2 2
205 Cuba 12297 A 2 2
206 Cuba 12298 A 2 2
207 Cuba 12299 A 2 2
208 Cuba 12300 T 2 2
209 Cuba 12301 G 2 2
210 Cuba 12302 T 2 2
211 Cuba 12303 A 2 2
212 Cuba 12304 T 2 2
213 Cuba 12305 A 2 2
214 Cuba 12306 A 2 2
215 Cuba 12307 A 2 2
216 Cuba 12308 C 2 2
217 Cuba 12309 A 2 2
218 Cuba 12310 G 2 2
219 Cuba 12311 G 2 2
220 Cuba 12312 C 2 2
221 Cuba 12313 T 2 2
222 Cuba 12314 A 2 2
223 Cuba 12315 G 2 2
224 Cuba 12316 A 2 2
225 Cuba 12317 T 2 2
226 Cuba 12318 C 2 2
227 Cuba 12319 T 2 2
228 Cuba 12320 G 2 2
229 Cuba 12321 A 2 2
230 Cuba 12322 G 2 2
231 Cuba 12323 G 2 2
232 Cuba 12324 A 2 2
233 Cuba 12325 C 2 2
234 Cuba 12326 A 2 2
235 Cuba 12327 A 2 2
236 Cuba 12328 G 2 2
237 Cuba 12329 A 2 2
238 Cuba 12330 G 2 2
239 Cuba 12331 G 2 2
240 Cuba 12332 G 2 2
241 Cuba 12333 C 2 2
242 Cuba 12334 A 2 2
243 Cuba 12335 A 2 2
244 Cuba 12336 A 2 2
245 Cuba 12337 A 2 2
246 Cuba 12338 G 2 2
247 Cuba 12339 T 2 2
248 Cuba 12340 T 2 2
249 Cuba 12341 A 2 2
250 Cuba 12342 C 2 2
251 Cuba 12343 T 2 2
252 Cuba 12344 A 2 2
253 Cuba 12345 G 2 2
254 Cuba 12346 T 2 2
255 Cuba 12347 G 2 2
256 Cuba 12348 C 2 2
257 Cuba 12349 T 2 2
258 Cuba 12350 A 2 2
259 Cuba 12351 T 2 2
260 Cuba 12352 G 2 2
261 Cuba 12353 C 2 2
262 Cuba 12354 A 2 2
263 Cuba 12355 G 2 2
264 Cuba 12356 A 2 2
265 Cuba 12357 C 2 2
266 Cuba 12358 A 2 2
267 Cuba 12359 A 2 2
268 Cuba 12360 T 2 2
269 Cuba 12361 G 2 2
270 Cuba 12362 C 2 2
271 Cuba 12363 T 2 2
272 Cuba 12364 T 2 2
273 Cuba 12365 T 2 2
274 Cuba 12366 T 2 2
275 Cuba 12367 C 2 2
276 Cuba 12368 A 2 2
277 Cuba 12369 C 2 2
278 Cuba 12370 T 2 2
279 Cuba 12371 A 2 2
280 Cuba 12372 T 2 2
281 Cuba 12373 G 2 2
282 Cuba 12374 C 2 2
283 Cuba 12375 T 2 2
284 Cuba 12376 T 2 2
285 Cuba 12377 A 2 2
286 Cuba 12378 G 2 2
287 Cuba 12379 A 2 2
288 Cuba 12380 A 2 2
289 Cuba 12381 A 2 2
290 Cuba 12382 G 2 2
291 Cuba 12383 T 2 2
292 Cuba 12384 T 2 2
293 Cuba 12385 G 2 2
294 Cuba 12386 G 2 2
295 Cuba 12387 A 2 2
296 Cuba 12388 T 2 2
297 Cuba 12389 A 2 2
298 Cuba 12390 A 2 2
299 Cuba 12391 T 2 2
300 Cuba 12392 G 2 2
301 Cuba 12393 A 2 2
302 Cuba 12394 T 2 2
303 Cuba 12395 G 2 2
304 Cuba 12396 C 2 2
305 Cuba 12397 A 2 2
306 Cuba 12398 C 2 2
307 Cuba 12399 T 2 2
308 Cuba 12400 C 2 2
309 Cuba 12401 A 2 2
310 Cuba 12402 A 2 2
311 Cuba 12403 C 2 2
312 Cuba 12404 A 2 2
313 Cuba 12405 A 2 2
314 Cuba 12406 C 2 2
315 Cuba 12407 A 2 2
316 Cuba 12408 T 2 2
317 Cuba 12409 T 2 2
318 Cuba 12410 A 2 2
319 Cuba 12411 T 2 2
320 Cuba 12412 C 2 2
321 Cuba 12413 A 2 2
322 Cuba 12414 A 2 2
323 Cuba 12415 C 2 2
324 Cuba 12416 A 2 2
325 Cuba 12417 A 2 2
326 Cuba 12418 T 2 2
327 Cuba 12419 G 2 2
328 Cuba 12420 C 2 2
329 Cuba 12421 A 2 2
330 Cuba 12422 A 2 2
331 Cuba 12423 G 2 2
332 Cuba 12424 A 2 2
333 Cuba 12425 G 2 2
334 Cuba 12426 A 2 2
335 Cuba 12427 T 2 2
336 Cuba 12428 G 2 2
337 Cuba 12429 G 2 2
338 Cuba 12430 T 2 2
339 Cuba 12431 T 2 2
340 Cuba 12432 G 2 2
341 Cuba 12433 T 2 2
342 Cuba 12434 G 2 2
343 Cuba 12435 T 2 2
344 Cuba 12436 T 2 2
345 Cuba 12437 C 2 2
346 Cuba 12438 C 2 2
347 Cuba 12439 C 2 2
348 Cuba 12440 T 2 2
349 Cuba 12441 T 2 2
350 Cuba 12442 G 2 2
351 Cuba 12443 A 2 2
352 Cuba 12444 A 2 2
353 Cuba 12445 C 2 2
354 Cuba 12446 A 2 2
355 Cuba 12447 T 2 2
356 Cuba 12448 A 2 2
357 Cuba 12449 A 2 2
358 Cuba 12450 T 2 2
359 Cuba 12451 A 2 2
360 Cuba 12452 C 2 2
361 Cuba 12453 C 2 2
362 Cuba 12454 T 2 2
363 Cuba 12455 C 2 2
364 Cuba 12456 T 2 2
365 Cuba 12457 T 2 2
366 Cuba 12458 A 2 2
367 Cuba 12459 C 2 2
368 Cuba 12460 A 2 2
369 Cuba 12461 A 2 2
370 Cuba 12462 C 2 2
371 Cuba 12463 A 2 2
372 Cuba 12464 G 2 2
373 Cuba 12465 C 2 2
374 Cuba 12466 A 2 2
375 Cuba 12467 G 2 2
376 Cuba 12468 C 2 2
377 Cuba 12469 C 2 2
378 Cuba 12470 A 2 2
379 Cuba 12471 A 2 2
380 Cuba 12472 A 2 2
381 Cuba 12473 C 2 2
382 Cuba 12474 T 2 2
383 Cuba 12475 A 2 2
384 Cuba 12476 A 2 2
385 Cuba 12477 T 2 2
386 Cuba 12478 G 2 2
387 Cuba 12479 G 2 2
388 Cuba 12480 T 2 2
389 Cuba 12481 T 2 2
390 Cuba 12482 G 2 2
391 Cuba 12483 T 2 2
392 Cuba 12484 C 2 2
393 Cuba 12485 A 2 2
394 Cuba 12486 T 2 2
395 Cuba 12487 A 2 2
396 Cuba 12488 C 2 2
397 Cuba 12489 C 2 2
398 Cuba 12490 A 2 2
399 Cuba 12491 G 2 2
400 Cuba 12492 A 2 2
401 Cuba 12493 C 2 2
402 Cuba 12494 T 2 2
403 Cuba 12495 A 2 2
404 Cuba 12496 T 2 2
405 Cuba 12497 A 2 2
406 Cuba 12498 A 2 2
407 Cuba 12499 C 2 2
408 Cuba 12500 A 2 2
409 Cuba 12501 C 2 2
410 Cuba 12502 A 2 2
411 Cuba 12503 T 2 2
412 Cuba 12504 A 2 2
413 Cuba 12505 T 2 2
414 Cuba 12506 A 2 2
415 Cuba 12507 A 2 2
416 Cuba 12508 A 2 2
417 Cuba 12509 A 2 2
418 Cuba 12510 A 2 2
419 Cuba 12511 T 2 2
420 Cuba 12512 A 2 2
421 Cuba 12513 C 2 2
422 Cuba 12514 G 2 2
423 Cuba 12515 T 2 2
424 Cuba 12516 G 2 2
425 Cuba 12517 T 2 2
426 Cuba 12518 G 2 2
427 Cuba 12519 A 2 2
428 Cuba 12520 T 2 2
429 Cuba 12521 G 2 2
430 Cuba 12522 G 2 2
431 Cuba 12523 T 2 2
432 Cuba 12524 A 2 2
433 Cuba 12525 C 2 2
434 Cuba 12526 A 2 2
435 Cuba 12527 A 2 2
436 Cuba 12528 C 2 2
437 Cuba 12529 A 2 2
438 Cuba 12530 T 2 2
439 Cuba 12531 T 2 2
440 Cuba 12532 T 2 2
441 Cuba 12533 A 2 2
442 Cuba 12534 C 2 2
443 Cuba 12535 T 2 2
444 Cuba 12536 T 2 2
445 Cuba 12537 A 2 2
446 Cuba 12538 T 2 2
447 Cuba 12539 G 2 2
448 Cuba 12540 C 2 2
449 Cuba 12541 A 2 2
450 Cuba 12542 T 2 2
451 Cuba 12543 C 2 2
452 Cuba 12544 A 2 2
453 Cuba 12545 G 2 2
454 Cuba 12546 C 2 2
455 Cuba 12547 A 2 2
456 Cuba 12548 T 2 2
457 Cuba 12549 T 2 2
458 Cuba 12550 G 2 2
459 Cuba 12551 T 2 2
460 Cuba 12552 G 2 2
461 Cuba 12553 G 2 2
462 Cuba 12554 G 2 2
463 Cuba 12555 A 2 2
464 Cuba 12556 A 2 2
465 Cuba 12557 A 2 2
466 Cuba 12558 T 2 2
467 Cuba 12559 C 2 2
468 Cuba 12560 C 2 2
469 Cuba 12561 A 2 2
470 Cuba 12562 A 2 2
471 Cuba 12563 C 2 2
472 Cuba 12564 A 2 2
473 Cuba 12565 G 2 2
474 Cuba 12566 G 2 2
475 Cuba 12567 T 2 2
476 Cuba 12568 T 2 2
477 Cuba 12569 G 2 2
478 Cuba 12570 T 2 2
479 Cuba 12571 A 2 2
480 Cuba 12572 G 2 2
481 Cuba 12573 A 2 2
482 Cuba 12574 T 2 2
483 Cuba 12575 G 2 2
484 Cuba 12576 C 2 2
485 Cuba 12577 A 2 2
486 Cuba 12578 G 2 2
487 Cuba 12579 A 2 2
488 Cuba 12580 T 2 2
489 Cuba 12581 A 2 2
490 Cuba 12582 G 2 2
491 Cuba 12583 T 2 2
492 Cuba 12584 A 2 2
493 Cuba 12585 A 2 2
494 Cuba 12586 A 2 2
495 Cuba 12587 A 2 2
496 Cuba 12588 T 2 2
497 Cuba 12589 T 2 2
498 Cuba 12590 G 2 2
499 Cuba 12591 T 2 2
500 Cuba 12592 T 2 2
501 Cuba 12593 C 2 2
502 Cuba 12594 A 2 2
503 Cuba 12595 A 2 2
504 Cuba 12596 C 2 2
505 Cuba 12597 T 2 2
506 Cuba 12598 T 2 2
507 Cuba 12599 A 2 2
508 Cuba 12600 G 2 2
509 Cuba 12601 T 2 2
510 Cuba 12602 G 2 2
511 Cuba 12603 A 2 2
512 Cuba 12604 A 2 2
513 Cuba 12605 A 2 2
514 Cuba 12606 T 2 2
515 Cuba 12607 T 2 2
516 Cuba 12608 A 2 2
517 Cuba 12609 G 2 2
518 Cuba 12610 T 2 2
519 Cuba 12611 A 2 2
520 Cuba 12612 T 2 2
521 Cuba 12613 G 2 2
522 Cuba 12614 G 2 2
523 Cuba 12615 A 2 2
524 Cuba 12616 C 2 2
525 Cuba 12617 A 2 2
526 Cuba 12618 A 2 2
527 Cuba 12619 T 2 2
528 Cuba 12620 T 2 2
529 Cuba 12621 C 2 2
530 Cuba 12622 A 2 2
531 Cuba 12623 C 2 2
532 Cuba 12624 C 2 2
533 Cuba 12625 T 2 2
534 Cuba 12626 A 2 2
535 Cuba 12627 A 2 2
536 Cuba 12628 T 2 2
537 Cuba 12629 T 2 2
538 Cuba 12630 T 2 2
539 Cuba 12631 A 2 2
540 Cuba 12632 G 2 2
541 Cuba 12633 C 2 2
542 Cuba 12634 A 2 2
543 Cuba 12635 T 2 2
544 Cuba 12636 G 2 2
545 Cuba 12637 G 2 2
546 Cuba 12638 C 2 2
547 Cuba 12639 C 2 2
548 Cuba 12640 T 2 2
549 Cuba 12641 C 2 2
550 Cuba 12642 T 2 2
551 Cuba 12643 T 2 2
552 Cuba 12644 A 2 2
553 Cuba 12645 T 2 2
554 Cuba 12646 T 2 2
555 Cuba 12647 G 2 2
556 Cuba 12648 T 2 2
557 Cuba 12649 A 2 2
558 Cuba 12650 A 2 2
559 Cuba 12651 C 2 2
560 Cuba 12652 A 2 2
561 Cuba 12653 G 2 2
562 Cuba 12654 C 2 2
563 Cuba 12655 T 2 2
564 Cuba 12656 T 2 2
565 Cuba 12657 T 2 2
566 Cuba 12658 A 2 2
567 Cuba 12659 A 2 2
568 Cuba 12660 G 2 2
569 Cuba 12661 G 2 2
570 Cuba 12662 G 2 2
571 Cuba 12663 C 2 2
572 Cuba 12664 C 2 2
573 Cuba 12665 A 2 2
574 Cuba 12666 A 2 2
575 Cuba 12667 T 2 2
576 Cuba 12668 T 2 2
577 Cuba 12669 C 2 2
578 Cuba 12670 T 2 2
579 Cuba 12671 G 2 2
580 Cuba 12672 C 2 2
581 Cuba 12673 T 2 2
582 Cuba 12674 G 2 2
583 Cuba 12675 T 2 2
584 Cuba 12676 C 2 2
585 Cuba 12677 A 2 2
586 Cuba 12678 A 2 2
587 Cuba 12679 A 2 2
588 Cuba 12680 T 2 2
589 Cuba 12681 T 2 2
590 Cuba 12682 A 2 2
591 Cuba 12683 C 2 2
592 Cuba 12684 A 2 2
593 Cuba 12685 G 2 2