National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G I K L M N P Q R S T V W Y
-   594                                      
?                                          
A   84                                      
C   6                                      
D   39                                      
E   27                                      
F   15                                      
G   9                                      
I   30                                      
K   45                                      
L   54                                      
M   27                                      
N   39                                      
P   18                                      
Q   33                                      
R   21                                      
S   45                                      
T   39                                      
V   39                                      
W   6                                      
Y   18                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Croatia 12092 G 49 49
1 Croatia 12093 C 49 49
2 Croatia 12094 T 49 49
3 Croatia 12095 A 49 49
4 Croatia 12096 T 49 49
5 Croatia 12097 A 49 49
6 Croatia 12098 G 49 49
7 Croatia 12099 C 49 49
8 Croatia 12100 C 49 49
9 Croatia 12101 T 49 49
10 Croatia 12102 C 49 49
11 Croatia 12103 A 49 49
12 Croatia 12104 G 49 49
13 Croatia 12105 A 49 49
14 Croatia 12106 G 49 49
15 Croatia 12107 T 49 49
16 Croatia 12108 T 49 49
17 Croatia 12109 T 49 49
18 Croatia 12110 A 49 49
19 Croatia 12111 G 50 50
20 Croatia 12112 T 50 50
21 Croatia 12113 T 50 50
22 Croatia 12114 C 50 50
23 Croatia 12115 C 50 50
24 Croatia 12116 C 50 50
25 Croatia 12117 T 50 50
26 Croatia 12118 T 50 50
27 Croatia 12119 C 50 50
28 Croatia 12120 C 50 50
29 Croatia 12121 A 50 50
30 Croatia 12122 T 50 50
31 Croatia 12123 C 50 50
32 Croatia 12124 A 50 50
33 Croatia 12125 T 50 50
34 Croatia 12126 A 50 50
35 Croatia 12127 T 50 50
36 Croatia 12128 G 50 50
37 Croatia 12129 C 50 50
38 Croatia 12130 A 50 50
39 Croatia 12131 G 50 50
40 Croatia 12132 C 50 50
41 Croatia 12133 T 50 50
42 Croatia 12134 T 50 50
43 Croatia 12135 T 50 50
44 Croatia 12136 T 50 50
45 Croatia 12137 G 50 50
46 Croatia 12138 C 50 50
47 Croatia 12139 T 50 50
48 Croatia 12140 A 50 50
49 Croatia 12141 C 50 50
50 Croatia 12142 T 50 50
51 Croatia 12143 G 50 50
52 Croatia 12144 C 50 50
53 Croatia 12145 T 50 50
54 Croatia 12146 C 50 50
55 Croatia 12147 A 50 50
56 Croatia 12148 A 50 50
57 Croatia 12149 G 50 50
58 Croatia 12150 A 50 50
59 Croatia 12151 A 50 50
60 Croatia 12152 G 50 50
61 Croatia 12153 C 50 50
62 Croatia 12154 T 50 50
63 Croatia 12155 T 50 50
64 Croatia 12156 A 50 50
65 Croatia 12157 T 50 50
66 Croatia 12158 G 50 50
67 Croatia 12159 A 50 50
68 Croatia 12160 G 50 50
69 Croatia 12161 C 50 50
70 Croatia 12162 A 50 50
71 Croatia 12163 G 50 50
72 Croatia 12164 G 50 50
73 Croatia 12165 C 50 50
74 Croatia 12166 T 50 50
75 Croatia 12167 G 50 50
76 Croatia 12168 T 50 50
77 Croatia 12169 T 50 50
78 Croatia 12170 G 50 50
79 Croatia 12171 C 50 50
80 Croatia 12172 T 50 50
81 Croatia 12173 A 50 50
82 Croatia 12174 A 50 50
83 Croatia 12175 T 50 50
84 Croatia 12176 G 50 50
85 Croatia 12177 G 50 50
86 Croatia 12178 T 50 50
87 Croatia 12179 G 50 50
88 Croatia 12180 A 50 50
89 Croatia 12181 T 50 50
90 Croatia 12182 T 50 50
91 Croatia 12183 C 50 50
92 Croatia 12184 T 50 50
93 Croatia 12185 G 50 50
94 Croatia 12186 A 50 50
95 Croatia 12187 A 50 50
96 Croatia 12188 G 50 50
97 Croatia 12189 T 50 50
98 Croatia 12190 T 50 50
99 Croatia 12191 G 50 50
100 Croatia 12192 T 50 50
101 Croatia 12193 T 50 50
102 Croatia 12194 C 50 50
103 Croatia 12195 T 50 50
104 Croatia 12196 T 50 50
105 Croatia 12197 A 50 50
106 Croatia 12198 A 50 50
107 Croatia 12199 A 50 50
108 Croatia 12200 A 50 50
109 Croatia 12201 A 50 50
110 Croatia 12202 G 50 50
111 Croatia 12203 T 50 50
112 Croatia 12204 T 50 50
113 Croatia 12205 G 50 50
114 Croatia 12206 A 50 50
115 Croatia 12207 A 50 50
116 Croatia 12208 G 50 50
117 Croatia 12209 A 50 50
118 Croatia 12210 A 50 50
119 Croatia 12211 G 50 50
120 Croatia 12212 T 50 50
121 Croatia 12213 C 50 50
122 Croatia 12214 T 50 50
123 Croatia 12215 T 50 50
124 Croatia 12216 T 50 50
125 Croatia 12217 G 50 50
126 Croatia 12218 A 50 50
127 Croatia 12219 A 50 50
128 Croatia 12220 T 50 50
129 Croatia 12221 G 50 50
130 Croatia 12222 T 50 50
131 Croatia 12223 G 50 50
132 Croatia 12224 G 50 50
133 Croatia 12225 C 50 50
134 Croatia 12226 T 50 50
135 Croatia 12227 A 50 50
136 Croatia 12228 A 50 50
137 Croatia 12229 A 50 50
138 Croatia 12230 T 50 50
139 Croatia 12231 C 50 50
140 Croatia 12232 T 50 50
141 Croatia 12233 G 50 50
142 Croatia 12234 A 50 50
143 Croatia 12235 A 50 50
144 Croatia 12236 T 50 50
145 Croatia 12237 T 50 50
146 Croatia 12238 T 50 50
147 Croatia 12239 G 50 50
148 Croatia 12240 A 50 50
149 Croatia 12241 C 50 50
150 Croatia 12242 C 50 50
151 Croatia 12243 G 50 50
152 Croatia 12244 T 50 50
153 Croatia 12245 G 50 50
154 Croatia 12246 A 50 50
155 Croatia 12247 T 50 50
156 Croatia 12248 G 50 50
157 Croatia 12249 C 50 50
158 Croatia 12250 A 50 50
159 Croatia 12251 G 50 50
160 Croatia 12252 C 50 50
161 Croatia 12253 C 50 50
162 Croatia 12254 A 50 50
163 Croatia 12255 T 50 50
164 Croatia 12256 G 50 50
165 Croatia 12257 C 50 50
166 Croatia 12258 A 50 50
167 Croatia 12259 A 50 50
168 Croatia 12260 C 50 50
169 Croatia 12261 G 50 50
170 Croatia 12262 T 50 50
171 Croatia 12263 A 50 50
172 Croatia 12264 A 50 50
173 Croatia 12265 G 50 50
174 Croatia 12266 T 50 50
175 Croatia 12267 T 50 50
176 Croatia 12268 G 50 50
177 Croatia 12269 G 50 50
178 Croatia 12270 A 50 50
179 Croatia 12271 A 50 50
180 Croatia 12272 A 50 50
181 Croatia 12273 A 50 50
182 Croatia 12274 G 50 50
183 Croatia 12275 A 50 50
184 Croatia 12276 T 50 50
185 Croatia 12277 G 50 50
186 Croatia 12278 G 50 50
187 Croatia 12279 C 50 50
188 Croatia 12280 T 50 50
189 Croatia 12281 G 50 50
190 Croatia 12282 A 50 50
191 Croatia 12283 T 50 50
192 Croatia 12284 C 50 50
193 Croatia 12285 A 50 50
194 Croatia 12286 A 50 50
195 Croatia 12287 G 50 50
196 Croatia 12288 C 50 50
197 Croatia 12289 T 50 50
198 Croatia 12290 A 50 50
199 Croatia 12291 T 50 50
200 Croatia 12292 G 50 50
201 Croatia 12293 A 50 50
202 Croatia 12294 C 50 50
203 Croatia 12295 C 50 50
204 Croatia 12296 C 50 50
205 Croatia 12297 A 50 50
206 Croatia 12298 A 50 50
207 Croatia 12299 A 50 50
208 Croatia 12300 T 50 50
209 Croatia 12301 G 50 50
210 Croatia 12302 T 50 50
211 Croatia 12303 A 50 50
212 Croatia 12304 T 50 50
213 Croatia 12305 A 50 50
214 Croatia 12306 A 50 50
215 Croatia 12307 A 50 50
216 Croatia 12308 C 50 50
217 Croatia 12309 A 50 50
218 Croatia 12310 G 50 50
219 Croatia 12311 G 50 50
220 Croatia 12312 C 50 50
221 Croatia 12313 T 50 50
222 Croatia 12314 A 50 50
223 Croatia 12315 G 50 50
224 Croatia 12316 A 50 50
225 Croatia 12317 T 50 50
226 Croatia 12318 C 50 50
227 Croatia 12319 T 50 50
228 Croatia 12320 G 50 50
229 Croatia 12321 A 50 50
230 Croatia 12322 G 50 50
231 Croatia 12323 G 50 50
232 Croatia 12324 A 50 50
233 Croatia 12325 C 50 50
234 Croatia 12326 A 50 50
235 Croatia 12327 A 50 50
236 Croatia 12328 G 50 50
237 Croatia 12329 A 50 50
238 Croatia 12330 G 50 50
239 Croatia 12331 G 50 50
240 Croatia 12332 G 50 50
241 Croatia 12333 C 50 50
242 Croatia 12334 A 50 50
243 Croatia 12335 A 50 50
244 Croatia 12336 A 50 50
245 Croatia 12337 A 50 50
246 Croatia 12338 G 50 50
247 Croatia 12339 T 50 50
248 Croatia 12340 T 50 50
249 Croatia 12341 A 50 50
250 Croatia 12342 C 50 50
251 Croatia 12343 T 50 50
252 Croatia 12344 A 50 50
253 Croatia 12345 G 50 50
254 Croatia 12346 T 50 50
255 Croatia 12347 G 50 50
256 Croatia 12348 C 50 50
257 Croatia 12349 T 50 50
258 Croatia 12350 A 50 50
259 Croatia 12351 T 50 50
260 Croatia 12352 G 50 50
261 Croatia 12353 C 50 50
262 Croatia 12354 A 50 50
263 Croatia 12355 G 50 50
264 Croatia 12356 A 50 50
265 Croatia 12357 C 50 50
266 Croatia 12358 A 50 50
267 Croatia 12359 A 50 50
268 Croatia 12360 T 50 50
269 Croatia 12361 G 50 50
270 Croatia 12362 C 50 50
271 Croatia 12363 T 50 50
272 Croatia 12364 T 50 50
273 Croatia 12365 T 50 50
274 Croatia 12366 T 50 50
275 Croatia 12367 C 50 50
276 Croatia 12368 A 50 50
277 Croatia 12369 C 50 50
278 Croatia 12370 T 50 50
279 Croatia 12371 A 50 50
280 Croatia 12372 T 50 50
281 Croatia 12373 G 50 50
282 Croatia 12374 C 50 50
283 Croatia 12375 T 50 50
284 Croatia 12376 T 50 50
285 Croatia 12377 A 50 50
286 Croatia 12378 G 50 50
287 Croatia 12379 A 50 50
288 Croatia 12380 A 50 50
289 Croatia 12381 A 50 50
290 Croatia 12382 G 50 50
291 Croatia 12383 T 50 50
292 Croatia 12384 T 50 50
293 Croatia 12385 G 50 50
294 Croatia 12386 G 50 50
295 Croatia 12387 A 50 50
296 Croatia 12388 T 50 50
297 Croatia 12389 A 50 50
298 Croatia 12390 A 50 50
299 Croatia 12391 T 50 50
300 Croatia 12392 G 50 50
301 Croatia 12393 A 50 50
302 Croatia 12394 T 50 50
303 Croatia 12395 G 50 50
304 Croatia 12396 C 50 50
305 Croatia 12397 A 50 50
306 Croatia 12398 C 50 50
307 Croatia 12399 T 50 50
308 Croatia 12400 C 50 50
309 Croatia 12401 A 50 50
310 Croatia 12402 A 50 50
311 Croatia 12403 C 50 50
312 Croatia 12404 A 50 50
313 Croatia 12405 A 50 50
314 Croatia 12406 C 50 50
315 Croatia 12407 A 50 50
316 Croatia 12408 T 50 50
317 Croatia 12409 T 50 50
318 Croatia 12410 A 50 50
319 Croatia 12411 T 50 50
320 Croatia 12412 C 50 50
321 Croatia 12413 A 50 50
322 Croatia 12414 A 50 50
323 Croatia 12415 C 50 50
324 Croatia 12416 A 50 50
325 Croatia 12417 A 50 50
326 Croatia 12418 T 50 50
327 Croatia 12419 G 50 50
328 Croatia 12420 C 50 50
329 Croatia 12421 A 50 50
330 Croatia 12422 A 50 50
331 Croatia 12423 G 50 50
332 Croatia 12424 A 50 50
333 Croatia 12425 G 50 50
334 Croatia 12426 A 50 50
335 Croatia 12427 T 50 50
336 Croatia 12428 G 50 50
337 Croatia 12429 G 50 50
338 Croatia 12430 T 50 50
339 Croatia 12431 T 50 50
340 Croatia 12432 G 50 50
341 Croatia 12433 T 50 50
342 Croatia 12434 G 50 50
343 Croatia 12435 T 50 50
344 Croatia 12436 T 50 50
345 Croatia 12437 C 50 50
346 Croatia 12438 C 50 50
347 Croatia 12439 C 50 50
348 Croatia 12440 T 50 50
349 Croatia 12441 T 50 50
350 Croatia 12442 G 50 50
351 Croatia 12443 A 50 50
352 Croatia 12444 A 50 50
353 Croatia 12445 C 50 50
354 Croatia 12446 A 50 50
355 Croatia 12447 T 50 50
356 Croatia 12448 A 50 50
357 Croatia 12449 A 50 50
358 Croatia 12450 T 50 50
359 Croatia 12451 A 50 50
360 Croatia 12452 C 50 50
361 Croatia 12453 C 50 50
362 Croatia 12454 T 50 50
363 Croatia 12455 C 50 50
364 Croatia 12456 T 50 50
365 Croatia 12457 T 50 50
366 Croatia 12458 A 50 50
367 Croatia 12459 C 50 50
368 Croatia 12460 A 50 50
369 Croatia 12461 A 50 50
370 Croatia 12462 C 50 50
371 Croatia 12463 A 50 50
372 Croatia 12464 G 50 50
373 Croatia 12465 C 50 50
374 Croatia 12466 A 50 50
375 Croatia 12467 G 50 50
376 Croatia 12468 C 50 50
377 Croatia 12469 C 50 50
378 Croatia 12470 A 50 50
379 Croatia 12471 A 50 50
380 Croatia 12472 A 50 50
381 Croatia 12473 C 50 50
382 Croatia 12474 T 50 50
383 Croatia 12475 A 50 50
384 Croatia 12476 A 50 50
385 Croatia 12477 T 50 50
386 Croatia 12478 G 50 50
387 Croatia 12479 G 50 50
388 Croatia 12480 T 50 50
389 Croatia 12481 T 50 50
390 Croatia 12482 G 50 50
391 Croatia 12483 T 50 50
392 Croatia 12484 C 50 50
393 Croatia 12485 A 50 50
394 Croatia 12486 T 50 50
395 Croatia 12487 A 50 50
396 Croatia 12488 C 50 50
397 Croatia 12489 C 50 50
398 Croatia 12490 A 50 50
399 Croatia 12491 G 50 50
400 Croatia 12492 A 50 50
401 Croatia 12493 C 50 50
402 Croatia 12494 T 50 49
403 Croatia 12495 A 50 49
404 Croatia 12496 T 50 50
405 Croatia 12497 A 50 50
406 Croatia 12498 A 50 49
407 Croatia 12499 C 50 49
408 Croatia 12500 A 50 50
409 Croatia 12501 C 50 50
410 Croatia 12502 A 50 49
411 Croatia 12503 T 50 49
412 Croatia 12504 A 50 50
413 Croatia 12505 T 50 50
414 Croatia 12506 A 50 50
415 Croatia 12507 A 50 50
416 Croatia 12508 A 50 50
417 Croatia 12509 A 50 50
418 Croatia 12510 A 50 50
419 Croatia 12511 T 50 50
420 Croatia 12512 A 50 50
421 Croatia 12513 C 50 50
422 Croatia 12514 G 50 50
423 Croatia 12515 T 50 50
424 Croatia 12516 G 50 50
425 Croatia 12517 T 50 50
426 Croatia 12518 G 50 50
427 Croatia 12519 A 50 50
428 Croatia 12520 T 50 50
429 Croatia 12521 G 50 50
430 Croatia 12522 G 50 50
431 Croatia 12523 T 50 50
432 Croatia 12524 A 50 50
433 Croatia 12525 C 50 50
434 Croatia 12526 A 50 50
435 Croatia 12527 A 50 50
436 Croatia 12528 C 50 50
437 Croatia 12529 A 50 50
438 Croatia 12530 T 50 50
439 Croatia 12531 T 50 50
440 Croatia 12532 T 50 50
441 Croatia 12533 A 50 50
442 Croatia 12534 C 50 50
443 Croatia 12535 T 50 50
444 Croatia 12536 T 50 50
445 Croatia 12537 A 50 50
446 Croatia 12538 T 50 50
447 Croatia 12539 G 50 50
448 Croatia 12540 C 50 50
449 Croatia 12541 A 50 50
450 Croatia 12542 T 50 50
451 Croatia 12543 C 50 50
452 Croatia 12544 A 50 50
453 Croatia 12545 G 50 50
454 Croatia 12546 C 50 50
455 Croatia 12547 A 50 50
456 Croatia 12548 T 50 50
457 Croatia 12549 T 50 50
458 Croatia 12550 G 50 50
459 Croatia 12551 T 50 50
460 Croatia 12552 G 50 50
461 Croatia 12553 G 50 50
462 Croatia 12554 G 50 50
463 Croatia 12555 A 50 50
464 Croatia 12556 A 50 50
465 Croatia 12557 A 50 50
466 Croatia 12558 T 50 50
467 Croatia 12559 C 50 50
468 Croatia 12560 C 50 50
469 Croatia 12561 A 50 50
470 Croatia 12562 A 50 50
471 Croatia 12563 C 50 50
472 Croatia 12564 A 50 50
473 Croatia 12565 G 50 50
474 Croatia 12566 G 50 50
475 Croatia 12567 T 50 50
476 Croatia 12568 T 50 50
477 Croatia 12569 G 50 50
478 Croatia 12570 T 50 50
479 Croatia 12571 A 50 50
480 Croatia 12572 G 50 50
481 Croatia 12573 A 50 50
482 Croatia 12574 T 50 50
483 Croatia 12575 G 50 50
484 Croatia 12576 C 50 50
485 Croatia 12577 A 50 50
486 Croatia 12578 G 50 50
487 Croatia 12579 A 50 50
488 Croatia 12580 T 50 50
489 Croatia 12581 A 50 50
490 Croatia 12582 G 50 50
491 Croatia 12583 T 50 50
492 Croatia 12584 A 50 50
493 Croatia 12585 A 50 50
494 Croatia 12586 A 50 50
495 Croatia 12587 A 50 50
496 Croatia 12588 T 50 50
497 Croatia 12589 T 50 50
498 Croatia 12590 G 50 50
499 Croatia 12591 T 50 50
500 Croatia 12592 T 50 50
501 Croatia 12593 C 50 50
502 Croatia 12594 A 50 50
503 Croatia 12595 A 50 50
504 Croatia 12596 C 50 50
505 Croatia 12597 T 50 50
506 Croatia 12598 T 50 50
507 Croatia 12599 A 50 50
508 Croatia 12600 G 50 50
509 Croatia 12601 T 50 50
510 Croatia 12602 G 50 50
511 Croatia 12603 A 50 50
512 Croatia 12604 A 50 50
513 Croatia 12605 A 50 50
514 Croatia 12606 T 50 50
515 Croatia 12607 T 50 50
516 Croatia 12608 A 50 50
517 Croatia 12609 G 50 50
518 Croatia 12610 T 50 50
519 Croatia 12611 A 50 50
520 Croatia 12612 T 50 50
521 Croatia 12613 G 50 50
522 Croatia 12614 G 50 50
523 Croatia 12615 A 50 50
524 Croatia 12616 C 50 50
525 Croatia 12617 A 50 50
526 Croatia 12618 A 50 50
527 Croatia 12619 T 50 50
528 Croatia 12620 T 50 50
529 Croatia 12621 C 50 50
530 Croatia 12622 A 50 50
531 Croatia 12623 C 50 50
532 Croatia 12624 C 50 50
533 Croatia 12625 T 50 50
534 Croatia 12626 A 50 50
535 Croatia 12627 A 50 50
536 Croatia 12628 T 50 50
537 Croatia 12629 T 50 50
538 Croatia 12630 T 50 50
539 Croatia 12631 A 50 50
540 Croatia 12632 G 50 50
541 Croatia 12633 C 50 50
542 Croatia 12634 A 50 50
543 Croatia 12635 T 50 50
544 Croatia 12636 G 50 50
545 Croatia 12637 G 50 50
546 Croatia 12638 C 50 50
547 Croatia 12639 C 50 50
548 Croatia 12640 T 50 50
549 Croatia 12641 C 50 50
550 Croatia 12642 T 50 50
551 Croatia 12643 T 50 50
552 Croatia 12644 A 50 50
553 Croatia 12645 T 50 50
554 Croatia 12646 T 50 50
555 Croatia 12647 G 50 50
556 Croatia 12648 T 50 50
557 Croatia 12649 A 50 50
558 Croatia 12650 A 50 50
559 Croatia 12651 C 50 50
560 Croatia 12652 A 50 50
561 Croatia 12653 G 50 50
562 Croatia 12654 C 50 50
563 Croatia 12655 T 50 50
564 Croatia 12656 T 50 50
565 Croatia 12657 T 50 50
566 Croatia 12658 A 50 50
567 Croatia 12659 A 50 50
568 Croatia 12660 G 50 50
569 Croatia 12661 G 50 50
570 Croatia 12662 G 50 50
571 Croatia 12663 C 50 50
572 Croatia 12664 C 50 50
573 Croatia 12665 A 50 50
574 Croatia 12666 A 50 50
575 Croatia 12667 T 50 50
576 Croatia 12668 T 50 50
577 Croatia 12669 C 50 50
578 Croatia 12670 T 50 50
579 Croatia 12671 G 50 50
580 Croatia 12672 C 50 50
581 Croatia 12673 T 50 50
582 Croatia 12674 G 50 50
583 Croatia 12675 T 50 50
584 Croatia 12676 C 50 50
585 Croatia 12677 A 50 50
586 Croatia 12678 A 50 50
587 Croatia 12679 A 50 50
588 Croatia 12680 T 50 50
589 Croatia 12681 T 50 50
590 Croatia 12682 A 50 50
591 Croatia 12683 C 50 50
592 Croatia 12684 A 50 50
593 Croatia 12685 G 50 50