National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G I K L M N P Q R S T V W Y
-   594                                      
?                                          
A   84                                      
C   6                                      
D   39                                      
E   27                                      
F   15                                      
G   9                                      
I   30                                      
K   45                                      
L   54                                      
M   27                                      
N   39                                      
P   18                                      
Q   33                                      
R   21                                      
S   45                                      
T   39                                      
V   39                                      
W   6                                      
Y   18                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Aruba 12092 G 11 11
1 Aruba 12093 C 11 11
2 Aruba 12094 T 11 11
3 Aruba 12095 A 11 11
4 Aruba 12096 T 11 11
5 Aruba 12097 A 11 11
6 Aruba 12098 G 11 11
7 Aruba 12099 C 11 11
8 Aruba 12100 C 11 11
9 Aruba 12101 T 11 11
10 Aruba 12102 C 11 11
11 Aruba 12103 A 11 11
12 Aruba 12104 G 11 11
13 Aruba 12105 A 11 11
14 Aruba 12106 G 11 11
15 Aruba 12107 T 11 11
16 Aruba 12108 T 11 11
17 Aruba 12109 T 11 11
18 Aruba 12110 A 11 11
19 Aruba 12111 G 11 11
20 Aruba 12112 T 11 11
21 Aruba 12113 T 11 11
22 Aruba 12114 C 11 11
23 Aruba 12115 C 11 11
24 Aruba 12116 C 11 11
25 Aruba 12117 T 11 11
26 Aruba 12118 T 11 11
27 Aruba 12119 C 11 11
28 Aruba 12120 C 11 11
29 Aruba 12121 A 11 11
30 Aruba 12122 T 11 11
31 Aruba 12123 C 11 11
32 Aruba 12124 A 11 11
33 Aruba 12125 T 11 11
34 Aruba 12126 A 11 11
35 Aruba 12127 T 11 11
36 Aruba 12128 G 11 11
37 Aruba 12129 C 11 11
38 Aruba 12130 A 11 11
39 Aruba 12131 G 11 11
40 Aruba 12132 C 11 11
41 Aruba 12133 T 11 11
42 Aruba 12134 T 11 11
43 Aruba 12135 T 11 11
44 Aruba 12136 T 11 11
45 Aruba 12137 G 11 11
46 Aruba 12138 C 11 11
47 Aruba 12139 T 11 11
48 Aruba 12140 A 11 11
49 Aruba 12141 C 11 11
50 Aruba 12142 T 11 11
51 Aruba 12143 G 11 11
52 Aruba 12144 C 11 11
53 Aruba 12145 T 11 11
54 Aruba 12146 C 11 11
55 Aruba 12147 A 11 11
56 Aruba 12148 A 11 11
57 Aruba 12149 G 11 11
58 Aruba 12150 A 11 11
59 Aruba 12151 A 11 11
60 Aruba 12152 G 11 11
61 Aruba 12153 C 11 11
62 Aruba 12154 T 11 11
63 Aruba 12155 T 11 11
64 Aruba 12156 A 11 11
65 Aruba 12157 T 11 11
66 Aruba 12158 G 11 11
67 Aruba 12159 A 11 11
68 Aruba 12160 G 11 11
69 Aruba 12161 C 11 11
70 Aruba 12162 A 11 11
71 Aruba 12163 G 11 11
72 Aruba 12164 G 11 11
73 Aruba 12165 C 11 11
74 Aruba 12166 T 11 11
75 Aruba 12167 G 11 11
76 Aruba 12168 T 11 11
77 Aruba 12169 T 11 11
78 Aruba 12170 G 11 11
79 Aruba 12171 C 11 11
80 Aruba 12172 T 11 11
81 Aruba 12173 A 11 11
82 Aruba 12174 A 11 11
83 Aruba 12175 T 11 11
84 Aruba 12176 G 11 11
85 Aruba 12177 G 11 11
86 Aruba 12178 T 11 11
87 Aruba 12179 G 11 11
88 Aruba 12180 A 11 11
89 Aruba 12181 T 11 11
90 Aruba 12182 T 11 11
91 Aruba 12183 C 11 11
92 Aruba 12184 T 11 11
93 Aruba 12185 G 11 11
94 Aruba 12186 A 11 11
95 Aruba 12187 A 11 11
96 Aruba 12188 G 11 11
97 Aruba 12189 T 11 11
98 Aruba 12190 T 11 11
99 Aruba 12191 G 11 11
100 Aruba 12192 T 11 11
101 Aruba 12193 T 11 11
102 Aruba 12194 C 11 11
103 Aruba 12195 T 11 11
104 Aruba 12196 T 11 11
105 Aruba 12197 A 11 11
106 Aruba 12198 A 11 11
107 Aruba 12199 A 11 11
108 Aruba 12200 A 11 11
109 Aruba 12201 A 11 11
110 Aruba 12202 G 11 11
111 Aruba 12203 T 11 11
112 Aruba 12204 T 11 11
113 Aruba 12205 G 11 11
114 Aruba 12206 A 11 11
115 Aruba 12207 A 11 11
116 Aruba 12208 G 11 11
117 Aruba 12209 A 11 11
118 Aruba 12210 A 11 11
119 Aruba 12211 G 11 11
120 Aruba 12212 T 11 11
121 Aruba 12213 C 11 11
122 Aruba 12214 T 11 11
123 Aruba 12215 T 11 11
124 Aruba 12216 T 11 11
125 Aruba 12217 G 11 11
126 Aruba 12218 A 11 11
127 Aruba 12219 A 11 11
128 Aruba 12220 T 11 11
129 Aruba 12221 G 11 11
130 Aruba 12222 T 11 11
131 Aruba 12223 G 11 11
132 Aruba 12224 G 11 11
133 Aruba 12225 C 11 11
134 Aruba 12226 T 11 11
135 Aruba 12227 A 11 11
136 Aruba 12228 A 11 11
137 Aruba 12229 A 11 11
138 Aruba 12230 T 11 11
139 Aruba 12231 C 11 11
140 Aruba 12232 T 11 11
141 Aruba 12233 G 11 11
142 Aruba 12234 A 11 11
143 Aruba 12235 A 11 11
144 Aruba 12236 T 11 11
145 Aruba 12237 T 11 11
146 Aruba 12238 T 11 11
147 Aruba 12239 G 11 11
148 Aruba 12240 A 11 11
149 Aruba 12241 C 11 11
150 Aruba 12242 C 11 11
151 Aruba 12243 G 11 11
152 Aruba 12244 T 11 11
153 Aruba 12245 G 11 11
154 Aruba 12246 A 11 11
155 Aruba 12247 T 11 11
156 Aruba 12248 G 11 11
157 Aruba 12249 C 11 11
158 Aruba 12250 A 11 11
159 Aruba 12251 G 11 11
160 Aruba 12252 C 11 11
161 Aruba 12253 C 11 11
162 Aruba 12254 A 11 11
163 Aruba 12255 T 11 11
164 Aruba 12256 G 11 11
165 Aruba 12257 C 11 11
166 Aruba 12258 A 11 11
167 Aruba 12259 A 11 11
168 Aruba 12260 C 11 11
169 Aruba 12261 G 11 11
170 Aruba 12262 T 11 11
171 Aruba 12263 A 11 11
172 Aruba 12264 A 11 11
173 Aruba 12265 G 11 11
174 Aruba 12266 T 11 11
175 Aruba 12267 T 11 11
176 Aruba 12268 G 11 11
177 Aruba 12269 G 11 11
178 Aruba 12270 A 11 11
179 Aruba 12271 A 11 11
180 Aruba 12272 A 11 11
181 Aruba 12273 A 11 11
182 Aruba 12274 G 11 11
183 Aruba 12275 A 11 11
184 Aruba 12276 T 11 11
185 Aruba 12277 G 11 11
186 Aruba 12278 G 11 11
187 Aruba 12279 C 11 11
188 Aruba 12280 T 11 11
189 Aruba 12281 G 11 11
190 Aruba 12282 A 11 11
191 Aruba 12283 T 11 11
192 Aruba 12284 C 11 11
193 Aruba 12285 A 11 11
194 Aruba 12286 A 11 11
195 Aruba 12287 G 11 11
196 Aruba 12288 C 11 11
197 Aruba 12289 T 11 11
198 Aruba 12290 A 11 11
199 Aruba 12291 T 11 11
200 Aruba 12292 G 11 11
201 Aruba 12293 A 11 11
202 Aruba 12294 C 11 11
203 Aruba 12295 C 11 11
204 Aruba 12296 C 11 11
205 Aruba 12297 A 11 11
206 Aruba 12298 A 11 11
207 Aruba 12299 A 11 11
208 Aruba 12300 T 11 11
209 Aruba 12301 G 11 11
210 Aruba 12302 T 11 11
211 Aruba 12303 A 11 11
212 Aruba 12304 T 11 11
213 Aruba 12305 A 11 11
214 Aruba 12306 A 11 11
215 Aruba 12307 A 11 11
216 Aruba 12308 C 11 11
217 Aruba 12309 A 11 11
218 Aruba 12310 G 11 11
219 Aruba 12311 G 11 11
220 Aruba 12312 C 11 11
221 Aruba 12313 T 11 11
222 Aruba 12314 A 11 11
223 Aruba 12315 G 11 11
224 Aruba 12316 A 11 11
225 Aruba 12317 T 11 11
226 Aruba 12318 C 11 11
227 Aruba 12319 T 11 11
228 Aruba 12320 G 11 11
229 Aruba 12321 A 11 11
230 Aruba 12322 G 11 11
231 Aruba 12323 G 11 11
232 Aruba 12324 A 11 11
233 Aruba 12325 C 11 11
234 Aruba 12326 A 11 11
235 Aruba 12327 A 11 11
236 Aruba 12328 G 11 11
237 Aruba 12329 A 11 11
238 Aruba 12330 G 11 11
239 Aruba 12331 G 11 11
240 Aruba 12332 G 11 11
241 Aruba 12333 C 11 11
242 Aruba 12334 A 11 11
243 Aruba 12335 A 11 11
244 Aruba 12336 A 11 11
245 Aruba 12337 A 11 11
246 Aruba 12338 G 11 11
247 Aruba 12339 T 11 11
248 Aruba 12340 T 11 11
249 Aruba 12341 A 11 11
250 Aruba 12342 C 11 11
251 Aruba 12343 T 11 11
252 Aruba 12344 A 11 11
253 Aruba 12345 G 11 11
254 Aruba 12346 T 11 11
255 Aruba 12347 G 11 11
256 Aruba 12348 C 11 11
257 Aruba 12349 T 11 11
258 Aruba 12350 A 11 11
259 Aruba 12351 T 11 11
260 Aruba 12352 G 11 11
261 Aruba 12353 C 11 11
262 Aruba 12354 A 11 11
263 Aruba 12355 G 11 11
264 Aruba 12356 A 11 11
265 Aruba 12357 C 11 11
266 Aruba 12358 A 11 11
267 Aruba 12359 A 11 11
268 Aruba 12360 T 11 11
269 Aruba 12361 G 11 11
270 Aruba 12362 C 11 11
271 Aruba 12363 T 11 11
272 Aruba 12364 T 11 11
273 Aruba 12365 T 11 11
274 Aruba 12366 T 11 11
275 Aruba 12367 C 11 11
276 Aruba 12368 A 11 11
277 Aruba 12369 C 11 11
278 Aruba 12370 T 11 11
279 Aruba 12371 A 11 11
280 Aruba 12372 T 11 11
281 Aruba 12373 G 11 11
282 Aruba 12374 C 11 11
283 Aruba 12375 T 11 11
284 Aruba 12376 T 11 11
285 Aruba 12377 A 11 11
286 Aruba 12378 G 11 11
287 Aruba 12379 A 11 11
288 Aruba 12380 A 11 11
289 Aruba 12381 A 11 11
290 Aruba 12382 G 11 11
291 Aruba 12383 T 11 11
292 Aruba 12384 T 11 11
293 Aruba 12385 G 11 11
294 Aruba 12386 G 11 11
295 Aruba 12387 A 11 11
296 Aruba 12388 T 11 11
297 Aruba 12389 A 11 11
298 Aruba 12390 A 11 11
299 Aruba 12391 T 11 11
300 Aruba 12392 G 11 11
301 Aruba 12393 A 11 11
302 Aruba 12394 T 11 11
303 Aruba 12395 G 11 11
304 Aruba 12396 C 11 11
305 Aruba 12397 A 11 11
306 Aruba 12398 C 11 11
307 Aruba 12399 T 11 11
308 Aruba 12400 C 11 11
309 Aruba 12401 A 11 11
310 Aruba 12402 A 11 11
311 Aruba 12403 C 11 11
312 Aruba 12404 A 11 11
313 Aruba 12405 A 11 11
314 Aruba 12406 C 11 11
315 Aruba 12407 A 11 11
316 Aruba 12408 T 11 11
317 Aruba 12409 T 11 11
318 Aruba 12410 A 11 11
319 Aruba 12411 T 11 11
320 Aruba 12412 C 11 11
321 Aruba 12413 A 11 11
322 Aruba 12414 A 11 11
323 Aruba 12415 C 11 11
324 Aruba 12416 A 11 11
325 Aruba 12417 A 11 11
326 Aruba 12418 T 11 11
327 Aruba 12419 G 11 11
328 Aruba 12420 C 11 11
329 Aruba 12421 A 11 11
330 Aruba 12422 A 11 11
331 Aruba 12423 G 11 11
332 Aruba 12424 A 11 11
333 Aruba 12425 G 11 11
334 Aruba 12426 A 11 11
335 Aruba 12427 T 11 11
336 Aruba 12428 G 11 11
337 Aruba 12429 G 11 11
338 Aruba 12430 T 11 11
339 Aruba 12431 T 11 11
340 Aruba 12432 G 11 11
341 Aruba 12433 T 11 11
342 Aruba 12434 G 11 11
343 Aruba 12435 T 11 11
344 Aruba 12436 T 11 11
345 Aruba 12437 C 11 11
346 Aruba 12438 C 11 11
347 Aruba 12439 C 11 11
348 Aruba 12440 T 11 11
349 Aruba 12441 T 11 11
350 Aruba 12442 G 11 11
351 Aruba 12443 A 11 11
352 Aruba 12444 A 11 11
353 Aruba 12445 C 11 11
354 Aruba 12446 A 11 11
355 Aruba 12447 T 11 11
356 Aruba 12448 A 11 11
357 Aruba 12449 A 11 11
358 Aruba 12450 T 11 11
359 Aruba 12451 A 11 11
360 Aruba 12452 C 11 11
361 Aruba 12453 C 11 11
362 Aruba 12454 T 11 11
363 Aruba 12455 C 11 11
364 Aruba 12456 T 11 11
365 Aruba 12457 T 11 11
366 Aruba 12458 A 11 11
367 Aruba 12459 C 11 11
368 Aruba 12460 A 11 11
369 Aruba 12461 A 11 11
370 Aruba 12462 C 11 11
371 Aruba 12463 A 11 11
372 Aruba 12464 G 11 11
373 Aruba 12465 C 11 11
374 Aruba 12466 A 11 11
375 Aruba 12467 G 11 11
376 Aruba 12468 C 11 11
377 Aruba 12469 C 11 11
378 Aruba 12470 A 11 11
379 Aruba 12471 A 11 11
380 Aruba 12472 A 11 11
381 Aruba 12473 C 11 11
382 Aruba 12474 T 11 11
383 Aruba 12475 A 11 11
384 Aruba 12476 A 11 11
385 Aruba 12477 T 11 11
386 Aruba 12478 G 11 11
387 Aruba 12479 G 11 11
388 Aruba 12480 T 11 11
389 Aruba 12481 T 11 11
390 Aruba 12482 G 11 11
391 Aruba 12483 T 11 11
392 Aruba 12484 C 11 11
393 Aruba 12485 A 11 11
394 Aruba 12486 T 11 11
395 Aruba 12487 A 11 11
396 Aruba 12488 C 11 11
397 Aruba 12489 C 11 11
398 Aruba 12490 A 11 11
399 Aruba 12491 G 11 11
400 Aruba 12492 A 11 11
401 Aruba 12493 C 11 11
402 Aruba 12494 T 11 11
403 Aruba 12495 A 11 11
404 Aruba 12496 T 11 11
405 Aruba 12497 A 11 11
406 Aruba 12498 A 11 11
407 Aruba 12499 C 11 11
408 Aruba 12500 A 11 11
409 Aruba 12501 C 11 11
410 Aruba 12502 A 11 11
411 Aruba 12503 T 11 11
412 Aruba 12504 A 11 11
413 Aruba 12505 T 11 11
414 Aruba 12506 A 11 11
415 Aruba 12507 A 11 11
416 Aruba 12508 A 11 11
417 Aruba 12509 A 11 11
418 Aruba 12510 A 11 11
419 Aruba 12511 T 11 11
420 Aruba 12512 A 11 11
421 Aruba 12513 C 11 11
422 Aruba 12514 G 11 11
423 Aruba 12515 T 11 11
424 Aruba 12516 G 11 11
425 Aruba 12517 T 11 11
426 Aruba 12518 G 11 11
427 Aruba 12519 A 11 11
428 Aruba 12520 T 11 11
429 Aruba 12521 G 11 11
430 Aruba 12522 G 11 11
431 Aruba 12523 T 11 11
432 Aruba 12524 A 11 11
433 Aruba 12525 C 11 11
434 Aruba 12526 A 11 11
435 Aruba 12527 A 11 11
436 Aruba 12528 C 11 11
437 Aruba 12529 A 11 11
438 Aruba 12530 T 11 11
439 Aruba 12531 T 11 11
440 Aruba 12532 T 11 11
441 Aruba 12533 A 11 11
442 Aruba 12534 C 11 11
443 Aruba 12535 T 11 11
444 Aruba 12536 T 11 11
445 Aruba 12537 A 11 11
446 Aruba 12538 T 11 11
447 Aruba 12539 G 11 11
448 Aruba 12540 C 11 11
449 Aruba 12541 A 11 11
450 Aruba 12542 T 11 11
451 Aruba 12543 C 11 11
452 Aruba 12544 A 11 11
453 Aruba 12545 G 11 11
454 Aruba 12546 C 11 11
455 Aruba 12547 A 11 11
456 Aruba 12548 T 11 11
457 Aruba 12549 T 11 11
458 Aruba 12550 G 11 11
459 Aruba 12551 T 11 11
460 Aruba 12552 G 11 11
461 Aruba 12553 G 11 11
462 Aruba 12554 G 11 11
463 Aruba 12555 A 11 11
464 Aruba 12556 A 11 11
465 Aruba 12557 A 11 11
466 Aruba 12558 T 11 11
467 Aruba 12559 C 11 11
468 Aruba 12560 C 11 11
469 Aruba 12561 A 11 11
470 Aruba 12562 A 11 11
471 Aruba 12563 C 11 11
472 Aruba 12564 A 11 11
473 Aruba 12565 G 11 11
474 Aruba 12566 G 11 11
475 Aruba 12567 T 11 11
476 Aruba 12568 T 11 11
477 Aruba 12569 G 11 11
478 Aruba 12570 T 11 11
479 Aruba 12571 A 11 11
480 Aruba 12572 G 11 11
481 Aruba 12573 A 11 11
482 Aruba 12574 T 11 11
483 Aruba 12575 G 11 11
484 Aruba 12576 C 11 11
485 Aruba 12577 A 11 11
486 Aruba 12578 G 11 11
487 Aruba 12579 A 11 11
488 Aruba 12580 T 11 11
489 Aruba 12581 A 11 11
490 Aruba 12582 G 11 11
491 Aruba 12583 T 11 11
492 Aruba 12584 A 11 11
493 Aruba 12585 A 11 11
494 Aruba 12586 A 11 11
495 Aruba 12587 A 11 11
496 Aruba 12588 T 11 11
497 Aruba 12589 T 11 11
498 Aruba 12590 G 11 11
499 Aruba 12591 T 11 11
500 Aruba 12592 T 11 11
501 Aruba 12593 C 11 11
502 Aruba 12594 A 11 11
503 Aruba 12595 A 11 11
504 Aruba 12596 C 11 11
505 Aruba 12597 T 11 11
506 Aruba 12598 T 11 11
507 Aruba 12599 A 11 11
508 Aruba 12600 G 11 11
509 Aruba 12601 T 11 11
510 Aruba 12602 G 11 11
511 Aruba 12603 A 11 11
512 Aruba 12604 A 11 11
513 Aruba 12605 A 11 11
514 Aruba 12606 T 11 11
515 Aruba 12607 T 11 11
516 Aruba 12608 A 11 11
517 Aruba 12609 G 11 11
518 Aruba 12610 T 11 11
519 Aruba 12611 A 11 11
520 Aruba 12612 T 11 11
521 Aruba 12613 G 11 11
522 Aruba 12614 G 11 11
523 Aruba 12615 A 11 11
524 Aruba 12616 C 11 11
525 Aruba 12617 A 11 11
526 Aruba 12618 A 11 11
527 Aruba 12619 T 11 11
528 Aruba 12620 T 11 11
529 Aruba 12621 C 11 11
530 Aruba 12622 A 11 11
531 Aruba 12623 C 11 11
532 Aruba 12624 C 11 11
533 Aruba 12625 T 11 11
534 Aruba 12626 A 11 11
535 Aruba 12627 A 11 11
536 Aruba 12628 T 11 11
537 Aruba 12629 T 11 11
538 Aruba 12630 T 11 11
539 Aruba 12631 A 11 11
540 Aruba 12632 G 11 11
541 Aruba 12633 C 11 11
542 Aruba 12634 A 11 11
543 Aruba 12635 T 11 11
544 Aruba 12636 G 11 11
545 Aruba 12637 G 11 11
546 Aruba 12638 C 11 11
547 Aruba 12639 C 11 11
548 Aruba 12640 T 11 11
549 Aruba 12641 C 11 11
550 Aruba 12642 T 11 11
551 Aruba 12643 T 11 11
552 Aruba 12644 A 11 11
553 Aruba 12645 T 11 11
554 Aruba 12646 T 11 11
555 Aruba 12647 G 11 11
556 Aruba 12648 T 11 11
557 Aruba 12649 A 11 11
558 Aruba 12650 A 11 11
559 Aruba 12651 C 11 11
560 Aruba 12652 A 11 11
561 Aruba 12653 G 11 11
562 Aruba 12654 C 11 11
563 Aruba 12655 T 11 11
564 Aruba 12656 T 11 11
565 Aruba 12657 T 11 11
566 Aruba 12658 A 11 11
567 Aruba 12659 A 11 11
568 Aruba 12660 G 11 11
569 Aruba 12661 G 11 11
570 Aruba 12662 G 11 11
571 Aruba 12663 C 11 11
572 Aruba 12664 C 11 11
573 Aruba 12665 A 11 11
574 Aruba 12666 A 11 11
575 Aruba 12667 T 11 11
576 Aruba 12668 T 11 11
577 Aruba 12669 C 11 11
578 Aruba 12670 T 11 11
579 Aruba 12671 G 11 11
580 Aruba 12672 C 11 11
581 Aruba 12673 T 11 11
582 Aruba 12674 G 11 11
583 Aruba 12675 T 11 11
584 Aruba 12676 C 11 11
585 Aruba 12677 A 11 11
586 Aruba 12678 A 11 11
587 Aruba 12679 A 11 11
588 Aruba 12680 T 11 11
589 Aruba 12681 T 11 11
590 Aruba 12682 A 11 11
591 Aruba 12683 C 11 11
592 Aruba 12684 A 11 11
593 Aruba 12685 G 11 11