National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G I K L M N P Q R S T V W Y
-   594                                      
?                                          
A   84                                      
C   6                                      
D   39                                      
E   27                                      
F   15                                      
G   9                                      
I   30                                      
K   45                                      
L   54                                      
M   27                                      
N   39                                      
P   18                                      
Q   33                                      
R   21                                      
S   45                                      
T   39                                      
V   39                                      
W   6                                      
Y   18                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Andorra 12092 G 1 1
1 Andorra 12093 C 1 1
2 Andorra 12094 T 1 1
3 Andorra 12095 A 1 1
4 Andorra 12096 T 1 1
5 Andorra 12097 A 1 1
6 Andorra 12098 G 1 1
7 Andorra 12099 C 1 1
8 Andorra 12100 C 1 1
9 Andorra 12101 T 1 1
10 Andorra 12102 C 1 1
11 Andorra 12103 A 1 1
12 Andorra 12104 G 1 1
13 Andorra 12105 A 1 1
14 Andorra 12106 G 1 1
15 Andorra 12107 T 1 1
16 Andorra 12108 T 1 1
17 Andorra 12109 T 1 1
18 Andorra 12110 A 1 1
19 Andorra 12111 G 1 1
20 Andorra 12112 T 1 1
21 Andorra 12113 T 1 1
22 Andorra 12114 C 1 1
23 Andorra 12115 C 1 1
24 Andorra 12116 C 1 1
25 Andorra 12117 T 1 1
26 Andorra 12118 T 1 1
27 Andorra 12119 C 1 1
28 Andorra 12120 C 1 1
29 Andorra 12121 A 1 1
30 Andorra 12122 T 1 1
31 Andorra 12123 C 1 1
32 Andorra 12124 A 1 1
33 Andorra 12125 T 1 1
34 Andorra 12126 A 1 1
35 Andorra 12127 T 1 1
36 Andorra 12128 G 1 1
37 Andorra 12129 C 1 1
38 Andorra 12130 A 1 1
39 Andorra 12131 G 1 1
40 Andorra 12132 C 1 1
41 Andorra 12133 T 1 1
42 Andorra 12134 T 1 1
43 Andorra 12135 T 1 1
44 Andorra 12136 T 1 1
45 Andorra 12137 G 1 1
46 Andorra 12138 C 1 1
47 Andorra 12139 T 1 1
48 Andorra 12140 A 1 1
49 Andorra 12141 C 1 1
50 Andorra 12142 T 1 1
51 Andorra 12143 G 1 1
52 Andorra 12144 C 1 1
53 Andorra 12145 T 1 1
54 Andorra 12146 C 1 1
55 Andorra 12147 A 1 1
56 Andorra 12148 A 1 1
57 Andorra 12149 G 1 1
58 Andorra 12150 A 1 1
59 Andorra 12151 A 1 1
60 Andorra 12152 G 1 1
61 Andorra 12153 C 1 1
62 Andorra 12154 T 1 1
63 Andorra 12155 T 1 1
64 Andorra 12156 A 1 1
65 Andorra 12157 T 1 1
66 Andorra 12158 G 1 1
67 Andorra 12159 A 1 1
68 Andorra 12160 G 1 1
69 Andorra 12161 C 1 1
70 Andorra 12162 A 1 1
71 Andorra 12163 G 1 1
72 Andorra 12164 G 1 1
73 Andorra 12165 C 1 1
74 Andorra 12166 T 1 1
75 Andorra 12167 G 1 1
76 Andorra 12168 T 1 1
77 Andorra 12169 T 1 1
78 Andorra 12170 G 1 1
79 Andorra 12171 C 1 1
80 Andorra 12172 T 1 1
81 Andorra 12173 A 1 1
82 Andorra 12174 A 1 1
83 Andorra 12175 T 1 1
84 Andorra 12176 G 1 1
85 Andorra 12177 G 1 1
86 Andorra 12178 T 1 1
87 Andorra 12179 G 1 1
88 Andorra 12180 A 1 1
89 Andorra 12181 T 1 1
90 Andorra 12182 T 1 1
91 Andorra 12183 C 1 1
92 Andorra 12184 T 1 1
93 Andorra 12185 G 1 1
94 Andorra 12186 A 1 1
95 Andorra 12187 A 1 1
96 Andorra 12188 G 1 1
97 Andorra 12189 T 1 1
98 Andorra 12190 T 1 1
99 Andorra 12191 G 1 1
100 Andorra 12192 T 1 1
101 Andorra 12193 T 1 1
102 Andorra 12194 C 1 1
103 Andorra 12195 T 1 1
104 Andorra 12196 T 1 1
105 Andorra 12197 A 1 1
106 Andorra 12198 A 1 1
107 Andorra 12199 A 1 1
108 Andorra 12200 A 1 1
109 Andorra 12201 A 1 1
110 Andorra 12202 G 1 1
111 Andorra 12203 T 1 1
112 Andorra 12204 T 1 1
113 Andorra 12205 G 1 1
114 Andorra 12206 A 1 1
115 Andorra 12207 A 1 1
116 Andorra 12208 G 1 1
117 Andorra 12209 A 1 1
118 Andorra 12210 A 1 1
119 Andorra 12211 G 1 1
120 Andorra 12212 T 1 1
121 Andorra 12213 C 1 1
122 Andorra 12214 T 1 1
123 Andorra 12215 T 1 1
124 Andorra 12216 T 1 1
125 Andorra 12217 G 1 1
126 Andorra 12218 A 1 1
127 Andorra 12219 A 1 1
128 Andorra 12220 T 1 1
129 Andorra 12221 G 1 1
130 Andorra 12222 T 1 1
131 Andorra 12223 G 1 1
132 Andorra 12224 G 1 1
133 Andorra 12225 C 1 1
134 Andorra 12226 T 1 1
135 Andorra 12227 A 1 1
136 Andorra 12228 A 1 1
137 Andorra 12229 A 1 1
138 Andorra 12230 T 1 1
139 Andorra 12231 C 1 1
140 Andorra 12232 T 1 1
141 Andorra 12233 G 1 1
142 Andorra 12234 A 1 1
143 Andorra 12235 A 1 1
144 Andorra 12236 T 1 1
145 Andorra 12237 T 1 1
146 Andorra 12238 T 1 1
147 Andorra 12239 G 1 1
148 Andorra 12240 A 1 1
149 Andorra 12241 C 1 1
150 Andorra 12242 C 1 1
151 Andorra 12243 G 1 1
152 Andorra 12244 T 1 1
153 Andorra 12245 G 1 1
154 Andorra 12246 A 1 1
155 Andorra 12247 T 1 1
156 Andorra 12248 G 1 1
157 Andorra 12249 C 1 1
158 Andorra 12250 A 1 1
159 Andorra 12251 G 1 1
160 Andorra 12252 C 1 1
161 Andorra 12253 C 1 1
162 Andorra 12254 A 1 1
163 Andorra 12255 T 1 1
164 Andorra 12256 G 1 1
165 Andorra 12257 C 1 1
166 Andorra 12258 A 1 1
167 Andorra 12259 A 1 1
168 Andorra 12260 C 1 1
169 Andorra 12261 G 1 1
170 Andorra 12262 T 1 1
171 Andorra 12263 A 1 1
172 Andorra 12264 A 1 1
173 Andorra 12265 G 1 1
174 Andorra 12266 T 1 1
175 Andorra 12267 T 1 1
176 Andorra 12268 G 1 1
177 Andorra 12269 G 1 1
178 Andorra 12270 A 1 1
179 Andorra 12271 A 1 1
180 Andorra 12272 A 1 1
181 Andorra 12273 A 1 1
182 Andorra 12274 G 1 1
183 Andorra 12275 A 1 1
184 Andorra 12276 T 1 1
185 Andorra 12277 G 1 1
186 Andorra 12278 G 1 1
187 Andorra 12279 C 1 1
188 Andorra 12280 T 1 1
189 Andorra 12281 G 1 1
190 Andorra 12282 A 1 1
191 Andorra 12283 T 1 1
192 Andorra 12284 C 1 1
193 Andorra 12285 A 1 1
194 Andorra 12286 A 1 1
195 Andorra 12287 G 1 1
196 Andorra 12288 C 1 1
197 Andorra 12289 T 1 1
198 Andorra 12290 A 1 1
199 Andorra 12291 T 1 1
200 Andorra 12292 G 1 1
201 Andorra 12293 A 1 1
202 Andorra 12294 C 1 1
203 Andorra 12295 C 1 1
204 Andorra 12296 C 1 1
205 Andorra 12297 A 1 1
206 Andorra 12298 A 1 1
207 Andorra 12299 A 1 1
208 Andorra 12300 T 1 1
209 Andorra 12301 G 1 1
210 Andorra 12302 T 1 1
211 Andorra 12303 A 1 1
212 Andorra 12304 T 1 1
213 Andorra 12305 A 1 1
214 Andorra 12306 A 1 1
215 Andorra 12307 A 1 1
216 Andorra 12308 C 1 1
217 Andorra 12309 A 1 1
218 Andorra 12310 G 1 1
219 Andorra 12311 G 1 1
220 Andorra 12312 C 1 1
221 Andorra 12313 T 1 1
222 Andorra 12314 A 1 1
223 Andorra 12315 G 1 1
224 Andorra 12316 A 1 1
225 Andorra 12317 T 1 1
226 Andorra 12318 C 1 1
227 Andorra 12319 T 1 1
228 Andorra 12320 G 1 1
229 Andorra 12321 A 1 1
230 Andorra 12322 G 1 1
231 Andorra 12323 G 1 1
232 Andorra 12324 A 1 1
233 Andorra 12325 C 1 1
234 Andorra 12326 A 1 1
235 Andorra 12327 A 1 1
236 Andorra 12328 G 1 1
237 Andorra 12329 A 1 1
238 Andorra 12330 G 1 1
239 Andorra 12331 G 1 1
240 Andorra 12332 G 1 1
241 Andorra 12333 C 1 1
242 Andorra 12334 A 1 1
243 Andorra 12335 A 1 1
244 Andorra 12336 A 1 1
245 Andorra 12337 A 1 1
246 Andorra 12338 G 1 1
247 Andorra 12339 T 1 1
248 Andorra 12340 T 1 1
249 Andorra 12341 A 1 1
250 Andorra 12342 C 1 1
251 Andorra 12343 T 1 1
252 Andorra 12344 A 1 1
253 Andorra 12345 G 1 1
254 Andorra 12346 T 1 1
255 Andorra 12347 G 1 1
256 Andorra 12348 C 1 1
257 Andorra 12349 T 1 1
258 Andorra 12350 A 1 1
259 Andorra 12351 T 1 1
260 Andorra 12352 G 1 1
261 Andorra 12353 C 1 1
262 Andorra 12354 A 1 1
263 Andorra 12355 G 1 1
264 Andorra 12356 A 1 1
265 Andorra 12357 C 1 1
266 Andorra 12358 A 1 1
267 Andorra 12359 A 1 1
268 Andorra 12360 T 1 1
269 Andorra 12361 G 1 1
270 Andorra 12362 C 1 1
271 Andorra 12363 T 1 1
272 Andorra 12364 T 1 1
273 Andorra 12365 T 1 1
274 Andorra 12366 T 1 1
275 Andorra 12367 C 1 1
276 Andorra 12368 A 1 1
277 Andorra 12369 C 1 1
278 Andorra 12370 T 1 1
279 Andorra 12371 A 1 1
280 Andorra 12372 T 1 1
281 Andorra 12373 G 1 1
282 Andorra 12374 C 1 1
283 Andorra 12375 T 1 1
284 Andorra 12376 T 1 1
285 Andorra 12377 A 1 1
286 Andorra 12378 G 1 1
287 Andorra 12379 A 1 1
288 Andorra 12380 A 1 1
289 Andorra 12381 A 1 1
290 Andorra 12382 G 1 1
291 Andorra 12383 T 1 1
292 Andorra 12384 T 1 1
293 Andorra 12385 G 1 1
294 Andorra 12386 G 1 1
295 Andorra 12387 A 1 1
296 Andorra 12388 T 1 1
297 Andorra 12389 A 1 1
298 Andorra 12390 A 1 1
299 Andorra 12391 T 1 1
300 Andorra 12392 G 1 1
301 Andorra 12393 A 1 1
302 Andorra 12394 T 1 1
303 Andorra 12395 G 1 1
304 Andorra 12396 C 1 1
305 Andorra 12397 A 1 1
306 Andorra 12398 C 1 1
307 Andorra 12399 T 1 1
308 Andorra 12400 C 1 1
309 Andorra 12401 A 1 1
310 Andorra 12402 A 1 1
311 Andorra 12403 C 1 1
312 Andorra 12404 A 1 1
313 Andorra 12405 A 1 1
314 Andorra 12406 C 1 1
315 Andorra 12407 A 1 1
316 Andorra 12408 T 1 1
317 Andorra 12409 T 1 1
318 Andorra 12410 A 1 1
319 Andorra 12411 T 1 1
320 Andorra 12412 C 1 1
321 Andorra 12413 A 1 1
322 Andorra 12414 A 1 1
323 Andorra 12415 C 1 1
324 Andorra 12416 A 1 1
325 Andorra 12417 A 1 1
326 Andorra 12418 T 1 1
327 Andorra 12419 G 1 1
328 Andorra 12420 C 1 1
329 Andorra 12421 A 1 1
330 Andorra 12422 A 1 1
331 Andorra 12423 G 1 1
332 Andorra 12424 A 1 1
333 Andorra 12425 G 1 1
334 Andorra 12426 A 1 1
335 Andorra 12427 T 1 1
336 Andorra 12428 G 1 1
337 Andorra 12429 G 1 1
338 Andorra 12430 T 1 1
339 Andorra 12431 T 1 1
340 Andorra 12432 G 1 1
341 Andorra 12433 T 1 1
342 Andorra 12434 G 1 1
343 Andorra 12435 T 1 1
344 Andorra 12436 T 1 1
345 Andorra 12437 C 1 1
346 Andorra 12438 C 1 1
347 Andorra 12439 C 1 1
348 Andorra 12440 T 1 1
349 Andorra 12441 T 1 1
350 Andorra 12442 G 1 1
351 Andorra 12443 A 1 1
352 Andorra 12444 A 1 1
353 Andorra 12445 C 1 1
354 Andorra 12446 A 1 1
355 Andorra 12447 T 1 1
356 Andorra 12448 A 1 1
357 Andorra 12449 A 1 1
358 Andorra 12450 T 1 1
359 Andorra 12451 A 1 1
360 Andorra 12452 C 1 1
361 Andorra 12453 C 1 1
362 Andorra 12454 T 1 1
363 Andorra 12455 C 1 1
364 Andorra 12456 T 1 1
365 Andorra 12457 T 1 1
366 Andorra 12458 A 1 1
367 Andorra 12459 C 1 1
368 Andorra 12460 A 1 1
369 Andorra 12461 A 1 1
370 Andorra 12462 C 1 1
371 Andorra 12463 A 1 1
372 Andorra 12464 G 1 1
373 Andorra 12465 C 1 1
374 Andorra 12466 A 1 1
375 Andorra 12467 G 1 1
376 Andorra 12468 C 1 1
377 Andorra 12469 C 1 1
378 Andorra 12470 A 1 1
379 Andorra 12471 A 1 1
380 Andorra 12472 A 1 1
381 Andorra 12473 C 1 1
382 Andorra 12474 T 1 1
383 Andorra 12475 A 1 1
384 Andorra 12476 A 1 1
385 Andorra 12477 T 1 1
386 Andorra 12478 G 1 1
387 Andorra 12479 G 1 1
388 Andorra 12480 T 1 1
389 Andorra 12481 T 1 1
390 Andorra 12482 G 1 1
391 Andorra 12483 T 1 1
392 Andorra 12484 C 1 1
393 Andorra 12485 A 1 1
394 Andorra 12486 T 1 1
395 Andorra 12487 A 1 1
396 Andorra 12488 C 1 1
397 Andorra 12489 C 1 1
398 Andorra 12490 A 1 1
399 Andorra 12491 G 1 1
400 Andorra 12492 A 1 1
401 Andorra 12493 C 1 1
402 Andorra 12494 T 1 1
403 Andorra 12495 A 1 1
404 Andorra 12496 T 1 1
405 Andorra 12497 A 1 1
406 Andorra 12498 A 1 1
407 Andorra 12499 C 1 1
408 Andorra 12500 A 1 1
409 Andorra 12501 C 1 1
410 Andorra 12502 A 1 1
411 Andorra 12503 T 1 1
412 Andorra 12504 A 1 1
413 Andorra 12505 T 1 1
414 Andorra 12506 A 1 1
415 Andorra 12507 A 1 1
416 Andorra 12508 A 1 1
417 Andorra 12509 A 1 1
418 Andorra 12510 A 1 1
419 Andorra 12511 T 1 1
420 Andorra 12512 A 1 1
421 Andorra 12513 C 1 1
422 Andorra 12514 G 1 1
423 Andorra 12515 T 1 1
424 Andorra 12516 G 1 1
425 Andorra 12517 T 1 1
426 Andorra 12518 G 1 1
427 Andorra 12519 A 1 1
428 Andorra 12520 T 1 1
429 Andorra 12521 G 1 1
430 Andorra 12522 G 1 1
431 Andorra 12523 T 1 1
432 Andorra 12524 A 1 1
433 Andorra 12525 C 1 1
434 Andorra 12526 A 1 1
435 Andorra 12527 A 1 1
436 Andorra 12528 C 1 1
437 Andorra 12529 A 1 1
438 Andorra 12530 T 1 1
439 Andorra 12531 T 1 1
440 Andorra 12532 T 1 1
441 Andorra 12533 A 1 1
442 Andorra 12534 C 1 1
443 Andorra 12535 T 1 1
444 Andorra 12536 T 1 1
445 Andorra 12537 A 1 1
446 Andorra 12538 T 1 1
447 Andorra 12539 G 1 1
448 Andorra 12540 C 1 1
449 Andorra 12541 A 1 1
450 Andorra 12542 T 1 1
451 Andorra 12543 C 1 1
452 Andorra 12544 A 1 1
453 Andorra 12545 G 1 1
454 Andorra 12546 C 1 1
455 Andorra 12547 A 1 1
456 Andorra 12548 T 1 1
457 Andorra 12549 T 1 1
458 Andorra 12550 G 1 1
459 Andorra 12551 T 1 1
460 Andorra 12552 G 1 1
461 Andorra 12553 G 1 1
462 Andorra 12554 G 1 1
463 Andorra 12555 A 1 1
464 Andorra 12556 A 1 1
465 Andorra 12557 A 1 1
466 Andorra 12558 T 1 1
467 Andorra 12559 C 1 1
468 Andorra 12560 C 1 1
469 Andorra 12561 A 1 1
470 Andorra 12562 A 1 1
471 Andorra 12563 C 1 1
472 Andorra 12564 A 1 1
473 Andorra 12565 G 1 1
474 Andorra 12566 G 1 1
475 Andorra 12567 T 1 1
476 Andorra 12568 T 1 1
477 Andorra 12569 G 1 1
478 Andorra 12570 T 1 1
479 Andorra 12571 A 1 1
480 Andorra 12572 G 1 1
481 Andorra 12573 A 1 1
482 Andorra 12574 T 1 1
483 Andorra 12575 G 1 1
484 Andorra 12576 C 1 1
485 Andorra 12577 A 1 1
486 Andorra 12578 G 1 1
487 Andorra 12579 A 1 1
488 Andorra 12580 T 1 1
489 Andorra 12581 A 1 1
490 Andorra 12582 G 1 1
491 Andorra 12583 T 1 1
492 Andorra 12584 A 1 1
493 Andorra 12585 A 1 1
494 Andorra 12586 A 1 1
495 Andorra 12587 A 1 1
496 Andorra 12588 T 1 1
497 Andorra 12589 T 1 1
498 Andorra 12590 G 1 1
499 Andorra 12591 T 1 1
500 Andorra 12592 T 1 1
501 Andorra 12593 C 1 1
502 Andorra 12594 A 1 1
503 Andorra 12595 A 1 1
504 Andorra 12596 C 1 1
505 Andorra 12597 T 1 1
506 Andorra 12598 T 1 1
507 Andorra 12599 A 1 1
508 Andorra 12600 G 1 1
509 Andorra 12601 T 1 1
510 Andorra 12602 G 1 1
511 Andorra 12603 A 1 1
512 Andorra 12604 A 1 1
513 Andorra 12605 A 1 1
514 Andorra 12606 T 1 1
515 Andorra 12607 T 1 1
516 Andorra 12608 A 1 1
517 Andorra 12609 G 1 1
518 Andorra 12610 T 1 1
519 Andorra 12611 A 1 1
520 Andorra 12612 T 1 1
521 Andorra 12613 G 1 1
522 Andorra 12614 G 1 1
523 Andorra 12615 A 1 1
524 Andorra 12616 C 1 1
525 Andorra 12617 A 1 1
526 Andorra 12618 A 1 1
527 Andorra 12619 T 1 1
528 Andorra 12620 T 1 1
529 Andorra 12621 C 1 1
530 Andorra 12622 A 1 1
531 Andorra 12623 C 1 1
532 Andorra 12624 C 1 1
533 Andorra 12625 T 1 1
534 Andorra 12626 A 1 1
535 Andorra 12627 A 1 1
536 Andorra 12628 T 1 1
537 Andorra 12629 T 1 1
538 Andorra 12630 T 1 1
539 Andorra 12631 A 1 1
540 Andorra 12632 G 1 1
541 Andorra 12633 C 1 1
542 Andorra 12634 A 1 1
543 Andorra 12635 T 1 1
544 Andorra 12636 G 1 1
545 Andorra 12637 G 1 1
546 Andorra 12638 C 1 1
547 Andorra 12639 C 1 1
548 Andorra 12640 T 1 1
549 Andorra 12641 C 1 1
550 Andorra 12642 T 1 1
551 Andorra 12643 T 1 1
552 Andorra 12644 A 1 1
553 Andorra 12645 T 1 1
554 Andorra 12646 T 1 1
555 Andorra 12647 G 1 1
556 Andorra 12648 T 1 1
557 Andorra 12649 A 1 1
558 Andorra 12650 A 1 1
559 Andorra 12651 C 1 1
560 Andorra 12652 A 1 1
561 Andorra 12653 G 1 1
562 Andorra 12654 C 1 1
563 Andorra 12655 T 1 1
564 Andorra 12656 T 1 1
565 Andorra 12657 T 1 1
566 Andorra 12658 A 1 1
567 Andorra 12659 A 1 1
568 Andorra 12660 G 1 1
569 Andorra 12661 G 1 1
570 Andorra 12662 G 1 1
571 Andorra 12663 C 1 1
572 Andorra 12664 C 1 1
573 Andorra 12665 A 1 1
574 Andorra 12666 A 1 1
575 Andorra 12667 T 1 1
576 Andorra 12668 T 1 1
577 Andorra 12669 C 1 1
578 Andorra 12670 T 1 1
579 Andorra 12671 G 1 1
580 Andorra 12672 C 1 1
581 Andorra 12673 T 1 1
582 Andorra 12674 G 1 1
583 Andorra 12675 T 1 1
584 Andorra 12676 C 1 1
585 Andorra 12677 A 1 1
586 Andorra 12678 A 1 1
587 Andorra 12679 A 1 1
588 Andorra 12680 T 1 1
589 Andorra 12681 T 1 1
590 Andorra 12682 A 1 1
591 Andorra 12683 C 1 1
592 Andorra 12684 A 1 1
593 Andorra 12685 G 1 1