National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G I K L M N P Q R S T V W Y
-   594                                      
?                                          
A   84                                      
C   6                                      
D   39                                      
E   27                                      
F   15         1                            
G   9                                      
I   30                                      
K   45                                      
L   54                                      
M   27                                      
N   39                                      
P   18                                      
Q   33                                      
R   21                                      
S   45                                      
T   39                                      
V   39                                      
W   6                                      
Y   18                                      

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Algeria 12092 G 18 18
1 Algeria 12093 C 18 18
2 Algeria 12094 T 18 18
3 Algeria 12095 A 18 18
4 Algeria 12096 T 18 18
5 Algeria 12097 A 18 18
6 Algeria 12098 G 18 18
7 Algeria 12099 C 18 18
8 Algeria 12100 C 18 18
9 Algeria 12101 T 18 18
10 Algeria 12102 C 18 18
11 Algeria 12103 A 18 18
12 Algeria 12104 G 18 18
13 Algeria 12105 A 18 18
14 Algeria 12106 G 18 18
15 Algeria 12107 T 18 18
16 Algeria 12108 T 18 18
17 Algeria 12109 T 18 18
18 Algeria 12110 A 18 18
19 Algeria 12111 G 18 18
20 Algeria 12112 T 18 18
21 Algeria 12113 T 18 18
22 Algeria 12114 C 18 18
23 Algeria 12115 C 18 18
24 Algeria 12116 C 18 18
25 Algeria 12117 T 18 18
26 Algeria 12118 T 18 18
27 Algeria 12119 C 18 18
28 Algeria 12120 C 18 18
29 Algeria 12121 A 18 18
30 Algeria 12122 T 18 18
31 Algeria 12123 C 18 18
32 Algeria 12124 A 18 18
33 Algeria 12125 T 18 18
34 Algeria 12126 A 18 18
35 Algeria 12127 T 18 18
36 Algeria 12128 G 18 18
37 Algeria 12129 C 18 18
38 Algeria 12130 A 18 18
39 Algeria 12131 G 18 18
40 Algeria 12132 C 18 18
41 Algeria 12133 T 18 18
42 Algeria 12134 T 18 18
43 Algeria 12135 T 18 18
44 Algeria 12136 T 18 18
45 Algeria 12137 G 18 18
46 Algeria 12138 C 18 18
47 Algeria 12139 T 18 18
48 Algeria 12140 A 18 18
49 Algeria 12141 C 18 18
50 Algeria 12142 T 18 18
51 Algeria 12143 G 18 18
52 Algeria 12144 C 18 18
53 Algeria 12145 T 18 18
54 Algeria 12146 C 18 18
55 Algeria 12147 A 18 18
56 Algeria 12148 A 18 18
57 Algeria 12149 G 18 18
58 Algeria 12150 A 18 18
59 Algeria 12151 A 18 18
60 Algeria 12152 G 18 18
61 Algeria 12153 C 18 18
62 Algeria 12154 T 18 18
63 Algeria 12155 T 18 18
64 Algeria 12156 A 18 18
65 Algeria 12157 T 18 18
66 Algeria 12158 G 18 18
67 Algeria 12159 A 18 18
68 Algeria 12160 G 18 18
69 Algeria 12161 C 18 18
70 Algeria 12162 A 18 18
71 Algeria 12163 G 18 18
72 Algeria 12164 G 18 18
73 Algeria 12165 C 18 18
74 Algeria 12166 T 18 18
75 Algeria 12167 G 18 18
76 Algeria 12168 T 18 18
77 Algeria 12169 T 18 18
78 Algeria 12170 G 18 18
79 Algeria 12171 C 18 18
80 Algeria 12172 T 18 18
81 Algeria 12173 A 18 18
82 Algeria 12174 A 18 18
83 Algeria 12175 T 18 18
84 Algeria 12176 G 18 18
85 Algeria 12177 G 18 18
86 Algeria 12178 T 18 18
87 Algeria 12179 G 18 18
88 Algeria 12180 A 18 18
89 Algeria 12181 T 18 18
90 Algeria 12182 T 18 18
91 Algeria 12183 C 18 18
92 Algeria 12184 T 18 18
93 Algeria 12185 G 18 18
94 Algeria 12186 A 18 18
95 Algeria 12187 A 18 18
96 Algeria 12188 G 18 18
97 Algeria 12189 T 18 18
98 Algeria 12190 T 18 18
99 Algeria 12191 G 18 18
100 Algeria 12192 T 18 18
101 Algeria 12193 T 18 18
102 Algeria 12194 C 18 18
103 Algeria 12195 T 18 18
104 Algeria 12196 T 18 18
105 Algeria 12197 A 18 18
106 Algeria 12198 A 18 18
107 Algeria 12199 A 18 18
108 Algeria 12200 A 18 18
109 Algeria 12201 A 18 18
110 Algeria 12202 G 18 18
111 Algeria 12203 T 18 18
112 Algeria 12204 T 18 18
113 Algeria 12205 G 18 18
114 Algeria 12206 A 18 18
115 Algeria 12207 A 18 18
116 Algeria 12208 G 18 18
117 Algeria 12209 A 18 18
118 Algeria 12210 A 18 18
119 Algeria 12211 G 18 18
120 Algeria 12212 T 18 18
121 Algeria 12213 C 18 18
122 Algeria 12214 T 18 18
123 Algeria 12215 T 18 18
124 Algeria 12216 T 18 18
125 Algeria 12217 G 18 18
126 Algeria 12218 A 18 18
127 Algeria 12219 A 18 18
128 Algeria 12220 T 18 18
129 Algeria 12221 G 18 18
130 Algeria 12222 T 18 18
131 Algeria 12223 G 18 18
132 Algeria 12224 G 18 18
133 Algeria 12225 C 18 18
134 Algeria 12226 T 18 18
135 Algeria 12227 A 18 18
136 Algeria 12228 A 18 18
137 Algeria 12229 A 18 18
138 Algeria 12230 T 18 18
139 Algeria 12231 C 18 18
140 Algeria 12232 T 18 18
141 Algeria 12233 G 18 18
142 Algeria 12234 A 18 18
143 Algeria 12235 A 18 18
144 Algeria 12236 T 18 18
145 Algeria 12237 T 18 18
146 Algeria 12238 T 18 18
147 Algeria 12239 G 18 18
148 Algeria 12240 A 18 18
149 Algeria 12241 C 18 18
150 Algeria 12242 C 18 18
151 Algeria 12243 G 18 18
152 Algeria 12244 T 18 18
153 Algeria 12245 G 18 18
154 Algeria 12246 A 18 18
155 Algeria 12247 T 18 18
156 Algeria 12248 G 18 18
157 Algeria 12249 C 18 18
158 Algeria 12250 A 18 18
159 Algeria 12251 G 18 18
160 Algeria 12252 C 18 18
161 Algeria 12253 C 18 18
162 Algeria 12254 A 18 18
163 Algeria 12255 T 18 18
164 Algeria 12256 G 18 18
165 Algeria 12257 C 18 18
166 Algeria 12258 A 18 18
167 Algeria 12259 A 18 18
168 Algeria 12260 C 18 18
169 Algeria 12261 G 18 18
170 Algeria 12262 T 18 18
171 Algeria 12263 A 18 18
172 Algeria 12264 A 18 18
173 Algeria 12265 G 18 18
174 Algeria 12266 T 18 18
175 Algeria 12267 T 18 18
176 Algeria 12268 G 18 18
177 Algeria 12269 G 18 18
178 Algeria 12270 A 18 18
179 Algeria 12271 A 18 18
180 Algeria 12272 A 18 18
181 Algeria 12273 A 18 18
182 Algeria 12274 G 18 18
183 Algeria 12275 A 18 18
184 Algeria 12276 T 18 18
185 Algeria 12277 G 18 18
186 Algeria 12278 G 18 18
187 Algeria 12279 C 18 18
188 Algeria 12280 T 18 18
189 Algeria 12281 G 18 18
190 Algeria 12282 A 18 18
191 Algeria 12283 T 18 18
192 Algeria 12284 C 18 18
193 Algeria 12285 A 18 18
194 Algeria 12286 A 18 18
195 Algeria 12287 G 18 18
196 Algeria 12288 C 18 18
197 Algeria 12289 T 18 18
198 Algeria 12290 A 18 18
199 Algeria 12291 T 18 18
200 Algeria 12292 G 18 18
201 Algeria 12293 A 18 18
202 Algeria 12294 C 18 18
203 Algeria 12295 C 18 18
204 Algeria 12296 C 18 18
205 Algeria 12297 A 18 18
206 Algeria 12298 A 18 18
207 Algeria 12299 A 18 18
208 Algeria 12300 T 18 18
209 Algeria 12301 G 18 18
210 Algeria 12302 T 18 18
211 Algeria 12303 A 18 18
212 Algeria 12304 T 18 18
213 Algeria 12305 A 18 18
214 Algeria 12306 A 18 18
215 Algeria 12307 A 18 18
216 Algeria 12308 C 18 18
217 Algeria 12309 A 18 18
218 Algeria 12310 G 18 18
219 Algeria 12311 G 18 18
220 Algeria 12312 C 18 18
221 Algeria 12313 T 18 18
222 Algeria 12314 A 18 18
223 Algeria 12315 G 18 18
224 Algeria 12316 A 18 18
225 Algeria 12317 T 18 18
226 Algeria 12318 C 18 18
227 Algeria 12319 T 18 18
228 Algeria 12320 G 18 18
229 Algeria 12321 A 18 18
230 Algeria 12322 G 18 18
231 Algeria 12323 G 18 18
232 Algeria 12324 A 18 18
233 Algeria 12325 C 18 18
234 Algeria 12326 A 18 18
235 Algeria 12327 A 18 18
236 Algeria 12328 G 18 18
237 Algeria 12329 A 18 18
238 Algeria 12330 G 18 18
239 Algeria 12331 G 18 18
240 Algeria 12332 G 18 18
241 Algeria 12333 C 18 18
242 Algeria 12334 A 18 18
243 Algeria 12335 A 18 18
244 Algeria 12336 A 18 18
245 Algeria 12337 A 18 18
246 Algeria 12338 G 18 18
247 Algeria 12339 T 18 18
248 Algeria 12340 T 18 18
249 Algeria 12341 A 18 18
250 Algeria 12342 C 18 18
251 Algeria 12343 T 18 18
252 Algeria 12344 A 18 18
253 Algeria 12345 G 18 18
254 Algeria 12346 T 18 18
255 Algeria 12347 G 18 18
256 Algeria 12348 C 18 18
257 Algeria 12349 T 18 18
258 Algeria 12350 A 18 18
259 Algeria 12351 T 18 18
260 Algeria 12352 G 18 18
261 Algeria 12353 C 18 18
262 Algeria 12354 A 18 18
263 Algeria 12355 G 18 18
264 Algeria 12356 A 18 18
265 Algeria 12357 C 18 18
266 Algeria 12358 A 18 18
267 Algeria 12359 A 18 18
268 Algeria 12360 T 18 18
269 Algeria 12361 G 18 18
270 Algeria 12362 C 18 18
271 Algeria 12363 T 18 18
272 Algeria 12364 T 18 18
273 Algeria 12365 T 18 18
274 Algeria 12366 T 18 18
275 Algeria 12367 C T 18 16 Phe4034Phe
276 Algeria 12368 A 18 18
277 Algeria 12369 C 18 18
278 Algeria 12370 T 18 18
279 Algeria 12371 A 18 18
280 Algeria 12372 T 18 18
281 Algeria 12373 G 18 18
282 Algeria 12374 C 18 18
283 Algeria 12375 T 18 18
284 Algeria 12376 T 18 18
285 Algeria 12377 A 18 18
286 Algeria 12378 G 18 18
287 Algeria 12379 A 18 18
288 Algeria 12380 A 18 18
289 Algeria 12381 A 18 18
290 Algeria 12382 G 18 18
291 Algeria 12383 T 18 18
292 Algeria 12384 T 18 18
293 Algeria 12385 G 18 18
294 Algeria 12386 G 18 18
295 Algeria 12387 A 18 18
296 Algeria 12388 T 18 18
297 Algeria 12389 A 18 18
298 Algeria 12390 A 18 18
299 Algeria 12391 T 18 18
300 Algeria 12392 G 18 18
301 Algeria 12393 A 18 18
302 Algeria 12394 T 18 18
303 Algeria 12395 G 18 18
304 Algeria 12396 C 18 18
305 Algeria 12397 A 18 18
306 Algeria 12398 C 18 18
307 Algeria 12399 T 18 18
308 Algeria 12400 C 18 18
309 Algeria 12401 A 18 18
310 Algeria 12402 A 18 18
311 Algeria 12403 C 18 18
312 Algeria 12404 A 18 18
313 Algeria 12405 A 18 18
314 Algeria 12406 C 18 18
315 Algeria 12407 A 18 18
316 Algeria 12408 T 18 18
317 Algeria 12409 T 18 18
318 Algeria 12410 A 18 18
319 Algeria 12411 T 18 18
320 Algeria 12412 C 18 18
321 Algeria 12413 A 18 18
322 Algeria 12414 A 18 18
323 Algeria 12415 C 18 18
324 Algeria 12416 A 18 18
325 Algeria 12417 A 18 18
326 Algeria 12418 T 18 18
327 Algeria 12419 G 18 18
328 Algeria 12420 C 18 18
329 Algeria 12421 A 18 18
330 Algeria 12422 A 18 18
331 Algeria 12423 G 18 18
332 Algeria 12424 A 18 18
333 Algeria 12425 G 18 18
334 Algeria 12426 A 18 18
335 Algeria 12427 T 18 18
336 Algeria 12428 G 18 18
337 Algeria 12429 G 18 18
338 Algeria 12430 T 18 18
339 Algeria 12431 T 18 18
340 Algeria 12432 G 18 18
341 Algeria 12433 T 18 18
342 Algeria 12434 G 18 18
343 Algeria 12435 T 18 18
344 Algeria 12436 T 18 18
345 Algeria 12437 C 18 18
346 Algeria 12438 C 18 18
347 Algeria 12439 C 18 18
348 Algeria 12440 T 18 18
349 Algeria 12441 T 18 18
350 Algeria 12442 G 18 18
351 Algeria 12443 A 18 18
352 Algeria 12444 A 18 18
353 Algeria 12445 C 18 18
354 Algeria 12446 A 18 18
355 Algeria 12447 T 18 18
356 Algeria 12448 A 18 18
357 Algeria 12449 A 18 18
358 Algeria 12450 T 18 18
359 Algeria 12451 A 18 18
360 Algeria 12452 C 18 18
361 Algeria 12453 C 18 18
362 Algeria 12454 T 18 18
363 Algeria 12455 C 18 18
364 Algeria 12456 T 18 18
365 Algeria 12457 T 18 18
366 Algeria 12458 A 18 18
367 Algeria 12459 C 18 18
368 Algeria 12460 A 18 18
369 Algeria 12461 A 18 18
370 Algeria 12462 C 18 18
371 Algeria 12463 A 18 18
372 Algeria 12464 G 18 18
373 Algeria 12465 C 18 18
374 Algeria 12466 A 18 18
375 Algeria 12467 G 18 18
376 Algeria 12468 C 18 18
377 Algeria 12469 C 18 18
378 Algeria 12470 A 18 18
379 Algeria 12471 A 18 18
380 Algeria 12472 A 18 18
381 Algeria 12473 C 18 18
382 Algeria 12474 T 18 18
383 Algeria 12475 A 18 18
384 Algeria 12476 A 18 18
385 Algeria 12477 T 18 18
386 Algeria 12478 G 18 18
387 Algeria 12479 G 18 18
388 Algeria 12480 T 18 18
389 Algeria 12481 T 18 18
390 Algeria 12482 G 18 18
391 Algeria 12483 T 18 18
392 Algeria 12484 C 18 18
393 Algeria 12485 A 18 18
394 Algeria 12486 T 18 18
395 Algeria 12487 A 18 18
396 Algeria 12488 C 18 18
397 Algeria 12489 C 18 18
398 Algeria 12490 A 18 18
399 Algeria 12491 G 18 18
400 Algeria 12492 A 18 18
401 Algeria 12493 C 18 18
402 Algeria 12494 T 18 18
403 Algeria 12495 A 18 18
404 Algeria 12496 T 18 18
405 Algeria 12497 A 18 18
406 Algeria 12498 A 18 18
407 Algeria 12499 C 18 18
408 Algeria 12500 A 18 18
409 Algeria 12501 C 18 18
410 Algeria 12502 A 18 18
411 Algeria 12503 T 18 18
412 Algeria 12504 A 18 18
413 Algeria 12505 T 18 18
414 Algeria 12506 A 18 18
415 Algeria 12507 A 18 18
416 Algeria 12508 A 18 18
417 Algeria 12509 A 18 18
418 Algeria 12510 A 18 18
419 Algeria 12511 T 18 18
420 Algeria 12512 A 18 18
421 Algeria 12513 C 18 18
422 Algeria 12514 G 18 18
423 Algeria 12515 T 18 18
424 Algeria 12516 G 18 18
425 Algeria 12517 T 18 18
426 Algeria 12518 G 18 18
427 Algeria 12519 A 18 18
428 Algeria 12520 T 18 18
429 Algeria 12521 G 18 18
430 Algeria 12522 G 18 18
431 Algeria 12523 T 18 18
432 Algeria 12524 A 18 18
433 Algeria 12525 C 18 18
434 Algeria 12526 A 18 18
435 Algeria 12527 A 18 18
436 Algeria 12528 C 18 18
437 Algeria 12529 A 18 18
438 Algeria 12530 T 18 18
439 Algeria 12531 T 18 18
440 Algeria 12532 T 18 18
441 Algeria 12533 A 18 18
442 Algeria 12534 C 18 18
443 Algeria 12535 T 18 18
444 Algeria 12536 T 18 18
445 Algeria 12537 A 18 18
446 Algeria 12538 T 18 18
447 Algeria 12539 G 18 18
448 Algeria 12540 C 18 18
449 Algeria 12541 A 18 18
450 Algeria 12542 T 18 18
451 Algeria 12543 C 18 18
452 Algeria 12544 A 18 18
453 Algeria 12545 G 18 18
454 Algeria 12546 C 18 18
455 Algeria 12547 A 18 18
456 Algeria 12548 T 18 18
457 Algeria 12549 T 18 18
458 Algeria 12550 G 18 18
459 Algeria 12551 T 18 18
460 Algeria 12552 G 18 18
461 Algeria 12553 G 18 18
462 Algeria 12554 G 18 18
463 Algeria 12555 A 18 18
464 Algeria 12556 A 18 18
465 Algeria 12557 A 18 18
466 Algeria 12558 T 18 18
467 Algeria 12559 C 18 18
468 Algeria 12560 C 18 18
469 Algeria 12561 A 18 18
470 Algeria 12562 A 18 18
471 Algeria 12563 C 18 18
472 Algeria 12564 A 18 18
473 Algeria 12565 G 18 18
474 Algeria 12566 G 18 18
475 Algeria 12567 T 18 18
476 Algeria 12568 T 18 18
477 Algeria 12569 G 18 18
478 Algeria 12570 T 18 18
479 Algeria 12571 A 18 18
480 Algeria 12572 G 18 18
481 Algeria 12573 A 18 18
482 Algeria 12574 T 18 18
483 Algeria 12575 G 18 18
484 Algeria 12576 C 18 18
485 Algeria 12577 A 18 18
486 Algeria 12578 G 18 18
487 Algeria 12579 A 18 18
488 Algeria 12580 T 18 18
489 Algeria 12581 A 18 18
490 Algeria 12582 G 18 18
491 Algeria 12583 T 18 18
492 Algeria 12584 A 18 18
493 Algeria 12585 A 18 18
494 Algeria 12586 A 18 18
495 Algeria 12587 A 18 18
496 Algeria 12588 T 18 18
497 Algeria 12589 T 18 18
498 Algeria 12590 G 18 18
499 Algeria 12591 T 18 18
500 Algeria 12592 T 18 18
501 Algeria 12593 C 18 18
502 Algeria 12594 A 18 18
503 Algeria 12595 A 18 18
504 Algeria 12596 C 18 18
505 Algeria 12597 T 18 18
506 Algeria 12598 T 18 18
507 Algeria 12599 A 18 18
508 Algeria 12600 G 18 18
509 Algeria 12601 T 18 18
510 Algeria 12602 G 18 18
511 Algeria 12603 A 18 18
512 Algeria 12604 A 18 18
513 Algeria 12605 A 18 18
514 Algeria 12606 T 18 18
515 Algeria 12607 T 18 18
516 Algeria 12608 A 18 18
517 Algeria 12609 G 18 18
518 Algeria 12610 T 18 18
519 Algeria 12611 A 18 18
520 Algeria 12612 T 18 18
521 Algeria 12613 G 18 18
522 Algeria 12614 G 18 18
523 Algeria 12615 A 18 18
524 Algeria 12616 C 18 18
525 Algeria 12617 A 18 18
526 Algeria 12618 A 18 18
527 Algeria 12619 T 18 18
528 Algeria 12620 T 18 18
529 Algeria 12621 C 18 18
530 Algeria 12622 A 18 18
531 Algeria 12623 C 18 18
532 Algeria 12624 C 18 18
533 Algeria 12625 T 18 18
534 Algeria 12626 A 18 18
535 Algeria 12627 A 18 18
536 Algeria 12628 T 18 18
537 Algeria 12629 T 18 18
538 Algeria 12630 T 18 18
539 Algeria 12631 A 18 18
540 Algeria 12632 G 18 18
541 Algeria 12633 C 18 18
542 Algeria 12634 A 18 18
543 Algeria 12635 T 18 18
544 Algeria 12636 G 18 18
545 Algeria 12637 G 18 18
546 Algeria 12638 C 18 18
547 Algeria 12639 C 18 18
548 Algeria 12640 T 18 18
549 Algeria 12641 C 18 18
550 Algeria 12642 T 18 18
551 Algeria 12643 T 18 18
552 Algeria 12644 A 18 18
553 Algeria 12645 T 18 18
554 Algeria 12646 T 18 18
555 Algeria 12647 G 18 18
556 Algeria 12648 T 18 18
557 Algeria 12649 A 18 18
558 Algeria 12650 A 18 18
559 Algeria 12651 C 18 18
560 Algeria 12652 A 18 18
561 Algeria 12653 G 18 18
562 Algeria 12654 C 18 18
563 Algeria 12655 T 18 18
564 Algeria 12656 T 18 18
565 Algeria 12657 T 18 18
566 Algeria 12658 A 18 18
567 Algeria 12659 A 18 18
568 Algeria 12660 G 18 18
569 Algeria 12661 G 18 18
570 Algeria 12662 G 18 18
571 Algeria 12663 C 18 18
572 Algeria 12664 C 18 18
573 Algeria 12665 A 18 18
574 Algeria 12666 A 18 18
575 Algeria 12667 T 18 18
576 Algeria 12668 T 18 18
577 Algeria 12669 C 18 18
578 Algeria 12670 T 18 18
579 Algeria 12671 G 18 18
580 Algeria 12672 C 18 18
581 Algeria 12673 T 18 18
582 Algeria 12674 G 18 18
583 Algeria 12675 T 18 18
584 Algeria 12676 C 18 18
585 Algeria 12677 A 18 18
586 Algeria 12678 A 18 18
587 Algeria 12679 A 18 18
588 Algeria 12680 T 18 18
589 Algeria 12681 T 18 18
590 Algeria 12682 A 18 18
591 Algeria 12683 C 18 18
592 Algeria 12684 A 18 18
593 Algeria 12685 G 18 18