National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N Q R S T V W
-   249                                    
?                                        
A   15                                    
C   9                                    
D   15                                    
E   15                                    
F   3                                    
G   3                                    
H   3                                    
I   6                                    
K   18                                    
L   45                                    
M   12                                    
N   9                                    
Q   18                                    
R   6                                    
S   30                                    
T   12                                    
V   27                                    
W   3                                    

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Republic_of_Congo 11843 T 11 11
1 Republic_of_Congo 11844 C 11 11
2 Republic_of_Congo 11845 T 11 11
3 Republic_of_Congo 11846 A 11 11
4 Republic_of_Congo 11847 A 11 11
5 Republic_of_Congo 11848 A 11 11
6 Republic_of_Congo 11849 A 11 11
7 Republic_of_Congo 11850 T 11 11
8 Republic_of_Congo 11851 G 11 11
9 Republic_of_Congo 11852 T 11 11
10 Republic_of_Congo 11853 C 11 11
11 Republic_of_Congo 11854 A 11 11
12 Republic_of_Congo 11855 G 11 11
13 Republic_of_Congo 11856 A 11 11
14 Republic_of_Congo 11857 T 11 11
15 Republic_of_Congo 11858 G 11 11
16 Republic_of_Congo 11859 T 11 11
17 Republic_of_Congo 11860 A 11 11
18 Republic_of_Congo 11861 A 11 11
19 Republic_of_Congo 11862 A 11 11
20 Republic_of_Congo 11863 G 11 11
21 Republic_of_Congo 11864 T 11 11
22 Republic_of_Congo 11865 G 11 11
23 Republic_of_Congo 11866 C 11 11
24 Republic_of_Congo 11867 A 11 11
25 Republic_of_Congo 11868 C 11 11
26 Republic_of_Congo 11869 A 11 11
27 Republic_of_Congo 11870 T 11 11
28 Republic_of_Congo 11871 C 11 11
29 Republic_of_Congo 11872 A 11 11
30 Republic_of_Congo 11873 G 11 11
31 Republic_of_Congo 11874 T 11 11
32 Republic_of_Congo 11875 A 11 11
33 Republic_of_Congo 11876 G 11 11
34 Republic_of_Congo 11877 T 11 11
35 Republic_of_Congo 11878 C 11 11
36 Republic_of_Congo 11879 T 11 11
37 Republic_of_Congo 11880 T 11 11
38 Republic_of_Congo 11881 A 11 11
39 Republic_of_Congo 11882 C 11 11
40 Republic_of_Congo 11883 T 11 11
41 Republic_of_Congo 11884 C 11 11
42 Republic_of_Congo 11885 T 11 11
43 Republic_of_Congo 11886 C 11 11
44 Republic_of_Congo 11887 A 11 11
45 Republic_of_Congo 11888 G 11 11
46 Republic_of_Congo 11889 T 11 11
47 Republic_of_Congo 11890 T 11 11
48 Republic_of_Congo 11891 T 11 11
49 Republic_of_Congo 11892 T 11 11
50 Republic_of_Congo 11893 G 11 11
51 Republic_of_Congo 11894 C 11 11
52 Republic_of_Congo 11895 A 11 11
53 Republic_of_Congo 11896 A 11 11
54 Republic_of_Congo 11897 C 11 11
55 Republic_of_Congo 11898 A 11 11
56 Republic_of_Congo 11899 A 11 11
57 Republic_of_Congo 11900 C 11 11
58 Republic_of_Congo 11901 T 11 11
59 Republic_of_Congo 11902 C 11 11
60 Republic_of_Congo 11903 A 11 11
61 Republic_of_Congo 11904 G 11 11
62 Republic_of_Congo 11905 A 11 11
63 Republic_of_Congo 11906 G 11 11
64 Republic_of_Congo 11907 T 11 11
65 Republic_of_Congo 11908 A 11 11
66 Republic_of_Congo 11909 G 11 11
67 Republic_of_Congo 11910 A 11 11
68 Republic_of_Congo 11911 A 11 11
69 Republic_of_Congo 11912 T 11 11
70 Republic_of_Congo 11913 C 11 11
71 Republic_of_Congo 11914 A 11 11
72 Republic_of_Congo 11915 T 11 11
73 Republic_of_Congo 11916 C 11 11
74 Republic_of_Congo 11917 A 11 11
75 Republic_of_Congo 11918 T 11 11
76 Republic_of_Congo 11919 C 11 11
77 Republic_of_Congo 11920 T 11 11
78 Republic_of_Congo 11921 A 11 11
79 Republic_of_Congo 11922 A 11 11
80 Republic_of_Congo 11923 A 11 11
81 Republic_of_Congo 11924 T 11 11
82 Republic_of_Congo 11925 T 11 11
83 Republic_of_Congo 11926 G 11 11
84 Republic_of_Congo 11927 T 11 11
85 Republic_of_Congo 11928 G 11 11
86 Republic_of_Congo 11929 G 11 11
87 Republic_of_Congo 11930 G 11 11
88 Republic_of_Congo 11931 C 11 11
89 Republic_of_Congo 11932 T 11 11
90 Republic_of_Congo 11933 C 11 11
91 Republic_of_Congo 11934 A 11 11
92 Republic_of_Congo 11935 A 11 11
93 Republic_of_Congo 11936 T 11 11
94 Republic_of_Congo 11937 G 11 11
95 Republic_of_Congo 11938 T 11 11
96 Republic_of_Congo 11939 G 11 11
97 Republic_of_Congo 11940 T 11 11
98 Republic_of_Congo 11941 C 11 11
99 Republic_of_Congo 11942 C 11 11
100 Republic_of_Congo 11943 A 11 11
101 Republic_of_Congo 11944 G 11 11
102 Republic_of_Congo 11945 T 11 11
103 Republic_of_Congo 11946 T 11 11
104 Republic_of_Congo 11947 A 11 11
105 Republic_of_Congo 11948 C 11 11
106 Republic_of_Congo 11949 A 11 11
107 Republic_of_Congo 11950 C 11 11
108 Republic_of_Congo 11951 A 11 11
109 Republic_of_Congo 11952 A 11 11
110 Republic_of_Congo 11953 T 11 11
111 Republic_of_Congo 11954 G 11 11
112 Republic_of_Congo 11955 A 11 11
113 Republic_of_Congo 11956 C 11 11
114 Republic_of_Congo 11957 A 11 11
115 Republic_of_Congo 11958 T 11 11
116 Republic_of_Congo 11959 T 11 11
117 Republic_of_Congo 11960 C 11 11
118 Republic_of_Congo 11961 T 11 11
119 Republic_of_Congo 11962 C 11 11
120 Republic_of_Congo 11963 T 11 11
121 Republic_of_Congo 11964 T 11 11
122 Republic_of_Congo 11965 A 11 11
123 Republic_of_Congo 11966 G 11 11
124 Republic_of_Congo 11967 C 11 11
125 Republic_of_Congo 11968 T 11 11
126 Republic_of_Congo 11969 A 11 11
127 Republic_of_Congo 11970 A 11 11
128 Republic_of_Congo 11971 A 11 11
129 Republic_of_Congo 11972 G 11 11
130 Republic_of_Congo 11973 A 11 11
131 Republic_of_Congo 11974 T 11 11
132 Republic_of_Congo 11975 A 11 11
133 Republic_of_Congo 11976 C 11 11
134 Republic_of_Congo 11977 T 11 11
135 Republic_of_Congo 11978 A 11 11
136 Republic_of_Congo 11979 C 11 11
137 Republic_of_Congo 11980 T 11 11
138 Republic_of_Congo 11981 G 11 11
139 Republic_of_Congo 11982 A 11 11
140 Republic_of_Congo 11983 A 11 11
141 Republic_of_Congo 11984 G 11 11
142 Republic_of_Congo 11985 C 11 11
143 Republic_of_Congo 11986 C 11 11
144 Republic_of_Congo 11987 T 11 11
145 Republic_of_Congo 11988 T 11 11
146 Republic_of_Congo 11989 T 11 11
147 Republic_of_Congo 11990 G 11 11
148 Republic_of_Congo 11991 A 11 11
149 Republic_of_Congo 11992 A 11 11
150 Republic_of_Congo 11993 A 11 11
151 Republic_of_Congo 11994 A 11 11
152 Republic_of_Congo 11995 A 11 11
153 Republic_of_Congo 11996 A 11 11
154 Republic_of_Congo 11997 T 11 11
155 Republic_of_Congo 11998 G 11 11
156 Republic_of_Congo 11999 G 11 11
157 Republic_of_Congo 12000 T 11 11
158 Republic_of_Congo 12001 T 11 11
159 Republic_of_Congo 12002 T 11 11
160 Republic_of_Congo 12003 C 11 11
161 Republic_of_Congo 12004 A 11 11
162 Republic_of_Congo 12005 C 11 11
163 Republic_of_Congo 12006 T 11 11
164 Republic_of_Congo 12007 A 11 11
165 Republic_of_Congo 12008 C 11 11
166 Republic_of_Congo 12009 T 11 11
167 Republic_of_Congo 12010 T 11 11
168 Republic_of_Congo 12011 T 11 11
169 Republic_of_Congo 12012 C 11 11
170 Republic_of_Congo 12013 T 11 11
171 Republic_of_Congo 12014 G 11 11
172 Republic_of_Congo 12015 T 11 11
173 Republic_of_Congo 12016 T 11 11
174 Republic_of_Congo 12017 T 11 11
175 Republic_of_Congo 12018 T 11 11
176 Republic_of_Congo 12019 G 11 11
177 Republic_of_Congo 12020 C 11 11
178 Republic_of_Congo 12021 T 11 11
179 Republic_of_Congo 12022 T 11 11
180 Republic_of_Congo 12023 T 11 11
181 Republic_of_Congo 12024 C 11 11
182 Republic_of_Congo 12025 C 11 11
183 Republic_of_Congo 12026 A 11 11
184 Republic_of_Congo 12027 T 11 11
185 Republic_of_Congo 12028 G 11 11
186 Republic_of_Congo 12029 C 11 11
187 Republic_of_Congo 12030 A 11 11
188 Republic_of_Congo 12031 G 11 11
189 Republic_of_Congo 12032 G 11 11
190 Republic_of_Congo 12033 G 11 11
191 Republic_of_Congo 12034 T 11 11
192 Republic_of_Congo 12035 G 11 11
193 Republic_of_Congo 12036 C 11 11
194 Republic_of_Congo 12037 T 11 11
195 Republic_of_Congo 12038 G 11 11
196 Republic_of_Congo 12039 T 11 11
197 Republic_of_Congo 12040 A 11 11
198 Republic_of_Congo 12041 G 11 11
199 Republic_of_Congo 12042 A 11 11
200 Republic_of_Congo 12043 C 11 11
201 Republic_of_Congo 12044 A 11 11
202 Republic_of_Congo 12045 T 11 11
203 Republic_of_Congo 12046 A 11 11
204 Republic_of_Congo 12047 A 11 11
205 Republic_of_Congo 12048 A 11 11
206 Republic_of_Congo 12049 C 11 11
207 Republic_of_Congo 12050 A 11 11
208 Republic_of_Congo 12051 A 11 11
209 Republic_of_Congo 12052 G 11 11
210 Republic_of_Congo 12053 C 11 11
211 Republic_of_Congo 12054 T 11 11
212 Republic_of_Congo 12055 T 11 11
213 Republic_of_Congo 12056 T 11 11
214 Republic_of_Congo 12057 G 11 11
215 Republic_of_Congo 12058 T 11 11
216 Republic_of_Congo 12059 G 11 11
217 Republic_of_Congo 12060 A 11 11
218 Republic_of_Congo 12061 A 11 11
219 Republic_of_Congo 12062 G 11 11
220 Republic_of_Congo 12063 A 11 11
221 Republic_of_Congo 12064 A 11 11
222 Republic_of_Congo 12065 A 11 11
223 Republic_of_Congo 12066 T 11 11
224 Republic_of_Congo 12067 G 11 11
225 Republic_of_Congo 12068 C 11 11
226 Republic_of_Congo 12069 T 11 11
227 Republic_of_Congo 12070 G 11 11
228 Republic_of_Congo 12071 G 11 11
229 Republic_of_Congo 12072 A 11 11
230 Republic_of_Congo 12073 C 11 11
231 Republic_of_Congo 12074 A 11 11
232 Republic_of_Congo 12075 A 11 11
233 Republic_of_Congo 12076 C 11 11
234 Republic_of_Congo 12077 A 11 11
235 Republic_of_Congo 12078 G 11 11
236 Republic_of_Congo 12079 G 11 11
237 Republic_of_Congo 12080 G 11 11
238 Republic_of_Congo 12081 C 11 11
239 Republic_of_Congo 12082 A 11 11
240 Republic_of_Congo 12083 A 11 11
241 Republic_of_Congo 12084 C 11 11
242 Republic_of_Congo 12085 C 11 11
243 Republic_of_Congo 12086 T 11 11
244 Republic_of_Congo 12087 T 11 11
245 Republic_of_Congo 12088 A 11 11
246 Republic_of_Congo 12089 C 11 11
247 Republic_of_Congo 12090 A 11 11
248 Republic_of_Congo 12091 A 11 11