National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
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Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N Q R S T V W
-   249                                    
?                                        
A   15                                    
C   9                                    
D   15                                    
E   15                                    
F   3                                    
G   3                                    
H   3                                    
I   6                                    
K   18                                    
L   45         1         1                
M   12                                    
N   9                                    
Q   18                                    
R   6                                    
S   30                                    
T   12                                    
V   27                                    
W   3                                    

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Equatorial_Guinea 11843 T 95 95
1 Equatorial_Guinea 11844 C 95 95
2 Equatorial_Guinea 11845 T 95 95
3 Equatorial_Guinea 11846 A 95 95
4 Equatorial_Guinea 11847 A 95 95
5 Equatorial_Guinea 11848 A 95 95
6 Equatorial_Guinea 11849 A 95 95
7 Equatorial_Guinea 11850 T 95 95
8 Equatorial_Guinea 11851 G 95 95
9 Equatorial_Guinea 11852 T 95 95
10 Equatorial_Guinea 11853 C 95 95
11 Equatorial_Guinea 11854 A 95 95
12 Equatorial_Guinea 11855 G 95 95
13 Equatorial_Guinea 11856 A 95 95
14 Equatorial_Guinea 11857 T 95 95
15 Equatorial_Guinea 11858 G 95 95
16 Equatorial_Guinea 11859 T 95 95
17 Equatorial_Guinea 11860 A 95 95
18 Equatorial_Guinea 11861 A 95 95
19 Equatorial_Guinea 11862 A 95 95
20 Equatorial_Guinea 11863 G 95 95
21 Equatorial_Guinea 11864 T 95 95
22 Equatorial_Guinea 11865 G 95 95
23 Equatorial_Guinea 11866 C 95 95
24 Equatorial_Guinea 11867 A 95 95
25 Equatorial_Guinea 11868 C 95 95
26 Equatorial_Guinea 11869 A 95 95
27 Equatorial_Guinea 11870 T 95 95
28 Equatorial_Guinea 11871 C 95 95
29 Equatorial_Guinea 11872 A 95 95
30 Equatorial_Guinea 11873 G 95 95
31 Equatorial_Guinea 11874 T 95 95
32 Equatorial_Guinea 11875 A 95 95
33 Equatorial_Guinea 11876 G 95 95
34 Equatorial_Guinea 11877 T 95 95
35 Equatorial_Guinea 11878 C 95 95
36 Equatorial_Guinea 11879 T 95 95
37 Equatorial_Guinea 11880 T 95 95
38 Equatorial_Guinea 11881 A 95 95
39 Equatorial_Guinea 11882 C 95 95
40 Equatorial_Guinea 11883 T 95 95
41 Equatorial_Guinea 11884 C 95 95
42 Equatorial_Guinea 11885 T 95 95
43 Equatorial_Guinea 11886 C 95 95
44 Equatorial_Guinea 11887 A 95 95
45 Equatorial_Guinea 11888 G 95 95
46 Equatorial_Guinea 11889 T 95 95
47 Equatorial_Guinea 11890 T 95 95
48 Equatorial_Guinea 11891 T 95 95
49 Equatorial_Guinea 11892 T 95 95
50 Equatorial_Guinea 11893 G 95 95
51 Equatorial_Guinea 11894 C 95 95
52 Equatorial_Guinea 11895 A 95 95
53 Equatorial_Guinea 11896 A 95 95
54 Equatorial_Guinea 11897 C 95 95
55 Equatorial_Guinea 11898 A 95 95
56 Equatorial_Guinea 11899 A 95 95
57 Equatorial_Guinea 11900 C 95 95
58 Equatorial_Guinea 11901 T 95 95
59 Equatorial_Guinea 11902 C 95 95
60 Equatorial_Guinea 11903 A 95 95
61 Equatorial_Guinea 11904 G 95 95
62 Equatorial_Guinea 11905 A 95 95
63 Equatorial_Guinea 11906 G 95 95
64 Equatorial_Guinea 11907 T 95 95
65 Equatorial_Guinea 11908 A 95 95
66 Equatorial_Guinea 11909 G 95 95
67 Equatorial_Guinea 11910 A 95 95
68 Equatorial_Guinea 11911 A 95 95
69 Equatorial_Guinea 11912 T 95 95
70 Equatorial_Guinea 11913 C 95 95
71 Equatorial_Guinea 11914 A 95 95
72 Equatorial_Guinea 11915 T 95 95
73 Equatorial_Guinea 11916 C 95 95
74 Equatorial_Guinea 11917 A 95 95
75 Equatorial_Guinea 11918 T 95 95
76 Equatorial_Guinea 11919 C 95 95
77 Equatorial_Guinea 11920 T 95 95
78 Equatorial_Guinea 11921 A 95 95
79 Equatorial_Guinea 11922 A 95 95
80 Equatorial_Guinea 11923 A 95 95
81 Equatorial_Guinea 11924 T 95 95
82 Equatorial_Guinea 11925 T 95 95
83 Equatorial_Guinea 11926 G 95 95
84 Equatorial_Guinea 11927 T 95 95
85 Equatorial_Guinea 11928 G 95 95
86 Equatorial_Guinea 11929 G 95 95
87 Equatorial_Guinea 11930 G 95 95
88 Equatorial_Guinea 11931 C 95 95
89 Equatorial_Guinea 11932 T 95 95
90 Equatorial_Guinea 11933 C 95 95
91 Equatorial_Guinea 11934 A 95 95
92 Equatorial_Guinea 11935 A 95 95
93 Equatorial_Guinea 11936 T 95 95
94 Equatorial_Guinea 11937 G 95 95
95 Equatorial_Guinea 11938 T 95 95
96 Equatorial_Guinea 11939 G 95 95
97 Equatorial_Guinea 11940 T 95 95
98 Equatorial_Guinea 11941 C 95 95
99 Equatorial_Guinea 11942 C 95 95
100 Equatorial_Guinea 11943 A 95 95
101 Equatorial_Guinea 11944 G 95 95
102 Equatorial_Guinea 11945 T 95 95
103 Equatorial_Guinea 11946 T 95 95
104 Equatorial_Guinea 11947 A 95 95
105 Equatorial_Guinea 11948 C 95 95
106 Equatorial_Guinea 11949 A 95 95
107 Equatorial_Guinea 11950 C 95 95
108 Equatorial_Guinea 11951 A 95 95
109 Equatorial_Guinea 11952 A 95 95
110 Equatorial_Guinea 11953 T 95 95
111 Equatorial_Guinea 11954 G 95 95
112 Equatorial_Guinea 11955 A 95 95
113 Equatorial_Guinea 11956 C 95 95
114 Equatorial_Guinea 11957 A 95 95
115 Equatorial_Guinea 11958 T 95 95
116 Equatorial_Guinea 11959 T 95 95
117 Equatorial_Guinea 11960 C 95 95
118 Equatorial_Guinea 11961 T 95 95
119 Equatorial_Guinea 11962 C T 95 94 Leu3899Leu
120 Equatorial_Guinea 11963 T 95 95
121 Equatorial_Guinea 11964 T 95 95
122 Equatorial_Guinea 11965 A 95 95
123 Equatorial_Guinea 11966 G 95 95
124 Equatorial_Guinea 11967 C 95 95
125 Equatorial_Guinea 11968 T 95 95
126 Equatorial_Guinea 11969 A 95 95
127 Equatorial_Guinea 11970 A 95 95
128 Equatorial_Guinea 11971 A 95 95
129 Equatorial_Guinea 11972 G 95 95
130 Equatorial_Guinea 11973 A 95 95
131 Equatorial_Guinea 11974 T 95 95
132 Equatorial_Guinea 11975 A 95 95
133 Equatorial_Guinea 11976 C 95 95
134 Equatorial_Guinea 11977 T 95 95
135 Equatorial_Guinea 11978 A 95 95
136 Equatorial_Guinea 11979 C 95 95
137 Equatorial_Guinea 11980 T 95 95
138 Equatorial_Guinea 11981 G 95 95
139 Equatorial_Guinea 11982 A 95 95
140 Equatorial_Guinea 11983 A 95 95
141 Equatorial_Guinea 11984 G 95 95
142 Equatorial_Guinea 11985 C 95 95
143 Equatorial_Guinea 11986 C 95 95
144 Equatorial_Guinea 11987 T 95 95
145 Equatorial_Guinea 11988 T 95 95
146 Equatorial_Guinea 11989 T 95 95
147 Equatorial_Guinea 11990 G 95 95
148 Equatorial_Guinea 11991 A 95 95
149 Equatorial_Guinea 11992 A 95 95
150 Equatorial_Guinea 11993 A 95 95
151 Equatorial_Guinea 11994 A 95 95
152 Equatorial_Guinea 11995 A 95 95
153 Equatorial_Guinea 11996 A 95 95
154 Equatorial_Guinea 11997 T 95 95
155 Equatorial_Guinea 11998 G 95 95
156 Equatorial_Guinea 11999 G 95 95
157 Equatorial_Guinea 12000 T 95 95
158 Equatorial_Guinea 12001 T 95 95
159 Equatorial_Guinea 12002 T 95 95
160 Equatorial_Guinea 12003 C 95 95
161 Equatorial_Guinea 12004 A 95 95
162 Equatorial_Guinea 12005 C 95 95
163 Equatorial_Guinea 12006 T 95 95
164 Equatorial_Guinea 12007 A 95 95
165 Equatorial_Guinea 12008 C 95 95
166 Equatorial_Guinea 12009 T 95 95
167 Equatorial_Guinea 12010 T 95 95
168 Equatorial_Guinea 12011 T 95 95
169 Equatorial_Guinea 12012 C 95 95
170 Equatorial_Guinea 12013 T 95 95
171 Equatorial_Guinea 12014 G 95 95
172 Equatorial_Guinea 12015 T 95 95
173 Equatorial_Guinea 12016 T 95 95
174 Equatorial_Guinea 12017 T 95 95
175 Equatorial_Guinea 12018 T 95 95
176 Equatorial_Guinea 12019 G 95 95
177 Equatorial_Guinea 12020 C 95 95
178 Equatorial_Guinea 12021 T 95 95
179 Equatorial_Guinea 12022 T 95 95
180 Equatorial_Guinea 12023 T 95 95
181 Equatorial_Guinea 12024 C 95 95
182 Equatorial_Guinea 12025 C 95 95
183 Equatorial_Guinea 12026 A 95 95
184 Equatorial_Guinea 12027 T 95 95
185 Equatorial_Guinea 12028 G 95 95
186 Equatorial_Guinea 12029 C 95 95
187 Equatorial_Guinea 12030 A 95 95
188 Equatorial_Guinea 12031 G 95 95
189 Equatorial_Guinea 12032 G 95 95
190 Equatorial_Guinea 12033 G 95 95
191 Equatorial_Guinea 12034 T 95 95
192 Equatorial_Guinea 12035 G 95 95
193 Equatorial_Guinea 12036 C 95 95
194 Equatorial_Guinea 12037 T 95 95
195 Equatorial_Guinea 12038 G 95 95
196 Equatorial_Guinea 12039 T 95 95
197 Equatorial_Guinea 12040 A 95 95
198 Equatorial_Guinea 12041 G 95 95
199 Equatorial_Guinea 12042 A 95 95
200 Equatorial_Guinea 12043 C 95 95
201 Equatorial_Guinea 12044 A 95 95
202 Equatorial_Guinea 12045 T 95 95
203 Equatorial_Guinea 12046 A 95 95
204 Equatorial_Guinea 12047 A 95 95
205 Equatorial_Guinea 12048 A 95 95
206 Equatorial_Guinea 12049 C 95 95
207 Equatorial_Guinea 12050 A 95 95
208 Equatorial_Guinea 12051 A 95 95
209 Equatorial_Guinea 12052 G 95 95
210 Equatorial_Guinea 12053 C T 95 94 Leu3930Phe
211 Equatorial_Guinea 12054 T 95 95
212 Equatorial_Guinea 12055 T 95 95
213 Equatorial_Guinea 12056 T 95 95
214 Equatorial_Guinea 12057 G 95 95
215 Equatorial_Guinea 12058 T 95 95
216 Equatorial_Guinea 12059 G 95 95
217 Equatorial_Guinea 12060 A 95 95
218 Equatorial_Guinea 12061 A 95 95
219 Equatorial_Guinea 12062 G 95 95
220 Equatorial_Guinea 12063 A 95 95
221 Equatorial_Guinea 12064 A 95 95
222 Equatorial_Guinea 12065 A 95 95
223 Equatorial_Guinea 12066 T 95 95
224 Equatorial_Guinea 12067 G 95 95
225 Equatorial_Guinea 12068 C 95 95
226 Equatorial_Guinea 12069 T 95 95
227 Equatorial_Guinea 12070 G 95 95
228 Equatorial_Guinea 12071 G 95 95
229 Equatorial_Guinea 12072 A 95 95
230 Equatorial_Guinea 12073 C 95 95
231 Equatorial_Guinea 12074 A 95 95
232 Equatorial_Guinea 12075 A 95 95
233 Equatorial_Guinea 12076 C 95 95
234 Equatorial_Guinea 12077 A 95 95
235 Equatorial_Guinea 12078 G 95 95
236 Equatorial_Guinea 12079 G 95 95
237 Equatorial_Guinea 12080 G 95 95
238 Equatorial_Guinea 12081 C 95 95
239 Equatorial_Guinea 12082 A 95 95
240 Equatorial_Guinea 12083 A 95 95
241 Equatorial_Guinea 12084 C 95 95
242 Equatorial_Guinea 12085 C 95 95
243 Equatorial_Guinea 12086 T 95 95
244 Equatorial_Guinea 12087 T 95 95
245 Equatorial_Guinea 12088 A 95 95
246 Equatorial_Guinea 12089 C 95 95
247 Equatorial_Guinea 12090 A 95 95
248 Equatorial_Guinea 12091 A 95 95