National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N Q R S T V W
-   249                                    
?                                        
A   15                                    
C   9                                    
D   15                                    
E   15                                    
F   3                                    
G   3                                    
H   3                                    
I   6                                    
K   18                                    
L   45                                    
M   12                                    
N   9                                    
Q   18                                    
R   6                                    
S   30                                    
T   12                                    
V   27                                    
W   3                                    

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Bosnia_and_Herzegovina 11843 T 33 33
1 Bosnia_and_Herzegovina 11844 C 33 33
2 Bosnia_and_Herzegovina 11845 T 33 33
3 Bosnia_and_Herzegovina 11846 A 33 33
4 Bosnia_and_Herzegovina 11847 A 33 33
5 Bosnia_and_Herzegovina 11848 A 33 33
6 Bosnia_and_Herzegovina 11849 A 33 33
7 Bosnia_and_Herzegovina 11850 T 33 33
8 Bosnia_and_Herzegovina 11851 G 33 33
9 Bosnia_and_Herzegovina 11852 T 33 33
10 Bosnia_and_Herzegovina 11853 C 33 33
11 Bosnia_and_Herzegovina 11854 A 33 33
12 Bosnia_and_Herzegovina 11855 G 33 33
13 Bosnia_and_Herzegovina 11856 A 33 33
14 Bosnia_and_Herzegovina 11857 T 33 33
15 Bosnia_and_Herzegovina 11858 G 33 33
16 Bosnia_and_Herzegovina 11859 T 33 33
17 Bosnia_and_Herzegovina 11860 A 33 33
18 Bosnia_and_Herzegovina 11861 A 33 33
19 Bosnia_and_Herzegovina 11862 A 33 33
20 Bosnia_and_Herzegovina 11863 G 33 33
21 Bosnia_and_Herzegovina 11864 T 33 33
22 Bosnia_and_Herzegovina 11865 G 33 33
23 Bosnia_and_Herzegovina 11866 C 33 33
24 Bosnia_and_Herzegovina 11867 A 33 33
25 Bosnia_and_Herzegovina 11868 C 33 33
26 Bosnia_and_Herzegovina 11869 A 33 33
27 Bosnia_and_Herzegovina 11870 T 33 33
28 Bosnia_and_Herzegovina 11871 C 33 33
29 Bosnia_and_Herzegovina 11872 A 33 33
30 Bosnia_and_Herzegovina 11873 G 33 33
31 Bosnia_and_Herzegovina 11874 T 33 33
32 Bosnia_and_Herzegovina 11875 A 33 33
33 Bosnia_and_Herzegovina 11876 G 33 33
34 Bosnia_and_Herzegovina 11877 T 33 33
35 Bosnia_and_Herzegovina 11878 C 33 33
36 Bosnia_and_Herzegovina 11879 T 33 33
37 Bosnia_and_Herzegovina 11880 T 33 33
38 Bosnia_and_Herzegovina 11881 A 33 33
39 Bosnia_and_Herzegovina 11882 C 33 33
40 Bosnia_and_Herzegovina 11883 T 33 33
41 Bosnia_and_Herzegovina 11884 C 33 33
42 Bosnia_and_Herzegovina 11885 T 33 33
43 Bosnia_and_Herzegovina 11886 C 33 33
44 Bosnia_and_Herzegovina 11887 A 33 33
45 Bosnia_and_Herzegovina 11888 G 33 33
46 Bosnia_and_Herzegovina 11889 T 33 33
47 Bosnia_and_Herzegovina 11890 T 33 33
48 Bosnia_and_Herzegovina 11891 T 33 33
49 Bosnia_and_Herzegovina 11892 T 33 33
50 Bosnia_and_Herzegovina 11893 G 33 33
51 Bosnia_and_Herzegovina 11894 C 33 33
52 Bosnia_and_Herzegovina 11895 A 33 33
53 Bosnia_and_Herzegovina 11896 A 33 33
54 Bosnia_and_Herzegovina 11897 C 33 33
55 Bosnia_and_Herzegovina 11898 A 33 33
56 Bosnia_and_Herzegovina 11899 A 33 33
57 Bosnia_and_Herzegovina 11900 C 33 33
58 Bosnia_and_Herzegovina 11901 T 33 33
59 Bosnia_and_Herzegovina 11902 C 33 33
60 Bosnia_and_Herzegovina 11903 A 33 33
61 Bosnia_and_Herzegovina 11904 G 33 33
62 Bosnia_and_Herzegovina 11905 A 33 33
63 Bosnia_and_Herzegovina 11906 G 33 33
64 Bosnia_and_Herzegovina 11907 T 33 33
65 Bosnia_and_Herzegovina 11908 A 33 33
66 Bosnia_and_Herzegovina 11909 G 33 33
67 Bosnia_and_Herzegovina 11910 A 33 33
68 Bosnia_and_Herzegovina 11911 A 33 33
69 Bosnia_and_Herzegovina 11912 T 33 33
70 Bosnia_and_Herzegovina 11913 C 33 33
71 Bosnia_and_Herzegovina 11914 A 33 33
72 Bosnia_and_Herzegovina 11915 T 33 33
73 Bosnia_and_Herzegovina 11916 C 33 33
74 Bosnia_and_Herzegovina 11917 A 33 33
75 Bosnia_and_Herzegovina 11918 T 33 33
76 Bosnia_and_Herzegovina 11919 C 33 33
77 Bosnia_and_Herzegovina 11920 T 33 33
78 Bosnia_and_Herzegovina 11921 A 33 33
79 Bosnia_and_Herzegovina 11922 A 33 33
80 Bosnia_and_Herzegovina 11923 A 33 33
81 Bosnia_and_Herzegovina 11924 T 33 33
82 Bosnia_and_Herzegovina 11925 T 33 33
83 Bosnia_and_Herzegovina 11926 G 33 33
84 Bosnia_and_Herzegovina 11927 T 33 33
85 Bosnia_and_Herzegovina 11928 G 33 33
86 Bosnia_and_Herzegovina 11929 G 33 33
87 Bosnia_and_Herzegovina 11930 G 33 33
88 Bosnia_and_Herzegovina 11931 C 33 33
89 Bosnia_and_Herzegovina 11932 T 33 33
90 Bosnia_and_Herzegovina 11933 C 33 33
91 Bosnia_and_Herzegovina 11934 A 33 33
92 Bosnia_and_Herzegovina 11935 A 33 33
93 Bosnia_and_Herzegovina 11936 T 33 33
94 Bosnia_and_Herzegovina 11937 G 33 33
95 Bosnia_and_Herzegovina 11938 T 33 33
96 Bosnia_and_Herzegovina 11939 G 33 33
97 Bosnia_and_Herzegovina 11940 T 33 33
98 Bosnia_and_Herzegovina 11941 C 33 33
99 Bosnia_and_Herzegovina 11942 C 33 33
100 Bosnia_and_Herzegovina 11943 A 33 33
101 Bosnia_and_Herzegovina 11944 G 33 33
102 Bosnia_and_Herzegovina 11945 T 33 33
103 Bosnia_and_Herzegovina 11946 T 33 33
104 Bosnia_and_Herzegovina 11947 A 33 33
105 Bosnia_and_Herzegovina 11948 C 33 33
106 Bosnia_and_Herzegovina 11949 A 33 33
107 Bosnia_and_Herzegovina 11950 C 33 33
108 Bosnia_and_Herzegovina 11951 A 33 33
109 Bosnia_and_Herzegovina 11952 A 33 33
110 Bosnia_and_Herzegovina 11953 T 33 33
111 Bosnia_and_Herzegovina 11954 G 33 33
112 Bosnia_and_Herzegovina 11955 A 33 33
113 Bosnia_and_Herzegovina 11956 C 33 33
114 Bosnia_and_Herzegovina 11957 A 33 33
115 Bosnia_and_Herzegovina 11958 T 33 33
116 Bosnia_and_Herzegovina 11959 T 33 33
117 Bosnia_and_Herzegovina 11960 C 33 33
118 Bosnia_and_Herzegovina 11961 T 33 33
119 Bosnia_and_Herzegovina 11962 C 33 33
120 Bosnia_and_Herzegovina 11963 T 33 33
121 Bosnia_and_Herzegovina 11964 T 33 33
122 Bosnia_and_Herzegovina 11965 A 33 33
123 Bosnia_and_Herzegovina 11966 G 33 33
124 Bosnia_and_Herzegovina 11967 C 33 33
125 Bosnia_and_Herzegovina 11968 T 33 33
126 Bosnia_and_Herzegovina 11969 A 33 33
127 Bosnia_and_Herzegovina 11970 A 33 33
128 Bosnia_and_Herzegovina 11971 A 33 33
129 Bosnia_and_Herzegovina 11972 G 33 33
130 Bosnia_and_Herzegovina 11973 A 33 33
131 Bosnia_and_Herzegovina 11974 T 33 33
132 Bosnia_and_Herzegovina 11975 A 33 33
133 Bosnia_and_Herzegovina 11976 C 33 33
134 Bosnia_and_Herzegovina 11977 T 33 33
135 Bosnia_and_Herzegovina 11978 A 33 33
136 Bosnia_and_Herzegovina 11979 C 33 33
137 Bosnia_and_Herzegovina 11980 T 33 33
138 Bosnia_and_Herzegovina 11981 G 33 33
139 Bosnia_and_Herzegovina 11982 A 33 33
140 Bosnia_and_Herzegovina 11983 A 33 33
141 Bosnia_and_Herzegovina 11984 G 33 33
142 Bosnia_and_Herzegovina 11985 C 33 33
143 Bosnia_and_Herzegovina 11986 C 33 33
144 Bosnia_and_Herzegovina 11987 T 33 33
145 Bosnia_and_Herzegovina 11988 T 33 33
146 Bosnia_and_Herzegovina 11989 T 33 33
147 Bosnia_and_Herzegovina 11990 G 33 33
148 Bosnia_and_Herzegovina 11991 A 33 33
149 Bosnia_and_Herzegovina 11992 A 33 33
150 Bosnia_and_Herzegovina 11993 A 33 33
151 Bosnia_and_Herzegovina 11994 A 33 33
152 Bosnia_and_Herzegovina 11995 A 33 33
153 Bosnia_and_Herzegovina 11996 A 33 33
154 Bosnia_and_Herzegovina 11997 T 33 33
155 Bosnia_and_Herzegovina 11998 G 33 33
156 Bosnia_and_Herzegovina 11999 G 33 33
157 Bosnia_and_Herzegovina 12000 T 33 33
158 Bosnia_and_Herzegovina 12001 T 33 33
159 Bosnia_and_Herzegovina 12002 T 33 33
160 Bosnia_and_Herzegovina 12003 C 33 33
161 Bosnia_and_Herzegovina 12004 A 33 33
162 Bosnia_and_Herzegovina 12005 C 33 33
163 Bosnia_and_Herzegovina 12006 T 33 33
164 Bosnia_and_Herzegovina 12007 A 33 33
165 Bosnia_and_Herzegovina 12008 C 33 33
166 Bosnia_and_Herzegovina 12009 T 33 33
167 Bosnia_and_Herzegovina 12010 T 33 33
168 Bosnia_and_Herzegovina 12011 T 33 33
169 Bosnia_and_Herzegovina 12012 C 33 33
170 Bosnia_and_Herzegovina 12013 T 33 33
171 Bosnia_and_Herzegovina 12014 G 33 33
172 Bosnia_and_Herzegovina 12015 T 33 33
173 Bosnia_and_Herzegovina 12016 T 33 33
174 Bosnia_and_Herzegovina 12017 T 33 33
175 Bosnia_and_Herzegovina 12018 T 33 33
176 Bosnia_and_Herzegovina 12019 G 33 33
177 Bosnia_and_Herzegovina 12020 C 33 33
178 Bosnia_and_Herzegovina 12021 T 33 33
179 Bosnia_and_Herzegovina 12022 T 33 33
180 Bosnia_and_Herzegovina 12023 T 33 33
181 Bosnia_and_Herzegovina 12024 C 33 33
182 Bosnia_and_Herzegovina 12025 C 33 33
183 Bosnia_and_Herzegovina 12026 A 33 33
184 Bosnia_and_Herzegovina 12027 T 33 33
185 Bosnia_and_Herzegovina 12028 G 33 33
186 Bosnia_and_Herzegovina 12029 C 33 33
187 Bosnia_and_Herzegovina 12030 A 33 33
188 Bosnia_and_Herzegovina 12031 G 33 33
189 Bosnia_and_Herzegovina 12032 G 33 33
190 Bosnia_and_Herzegovina 12033 G 33 33
191 Bosnia_and_Herzegovina 12034 T 33 33
192 Bosnia_and_Herzegovina 12035 G 33 33
193 Bosnia_and_Herzegovina 12036 C 33 33
194 Bosnia_and_Herzegovina 12037 T 33 33
195 Bosnia_and_Herzegovina 12038 G 33 33
196 Bosnia_and_Herzegovina 12039 T 33 33
197 Bosnia_and_Herzegovina 12040 A 33 33
198 Bosnia_and_Herzegovina 12041 G 33 33
199 Bosnia_and_Herzegovina 12042 A 33 33
200 Bosnia_and_Herzegovina 12043 C 33 33
201 Bosnia_and_Herzegovina 12044 A 33 33
202 Bosnia_and_Herzegovina 12045 T 33 33
203 Bosnia_and_Herzegovina 12046 A 33 33
204 Bosnia_and_Herzegovina 12047 A 33 33
205 Bosnia_and_Herzegovina 12048 A 33 33
206 Bosnia_and_Herzegovina 12049 C 33 33
207 Bosnia_and_Herzegovina 12050 A 33 33
208 Bosnia_and_Herzegovina 12051 A 33 33
209 Bosnia_and_Herzegovina 12052 G 33 33
210 Bosnia_and_Herzegovina 12053 C 33 33
211 Bosnia_and_Herzegovina 12054 T 33 33
212 Bosnia_and_Herzegovina 12055 T 33 33
213 Bosnia_and_Herzegovina 12056 T 33 33
214 Bosnia_and_Herzegovina 12057 G 33 33
215 Bosnia_and_Herzegovina 12058 T 33 33
216 Bosnia_and_Herzegovina 12059 G 33 33
217 Bosnia_and_Herzegovina 12060 A 33 33
218 Bosnia_and_Herzegovina 12061 A 33 33
219 Bosnia_and_Herzegovina 12062 G 33 33
220 Bosnia_and_Herzegovina 12063 A 33 33
221 Bosnia_and_Herzegovina 12064 A 33 33
222 Bosnia_and_Herzegovina 12065 A 33 33
223 Bosnia_and_Herzegovina 12066 T 33 33
224 Bosnia_and_Herzegovina 12067 G 33 33
225 Bosnia_and_Herzegovina 12068 C 33 33
226 Bosnia_and_Herzegovina 12069 T 33 33
227 Bosnia_and_Herzegovina 12070 G 33 33
228 Bosnia_and_Herzegovina 12071 G 33 33
229 Bosnia_and_Herzegovina 12072 A 33 33
230 Bosnia_and_Herzegovina 12073 C 33 33
231 Bosnia_and_Herzegovina 12074 A 33 33
232 Bosnia_and_Herzegovina 12075 A 33 33
233 Bosnia_and_Herzegovina 12076 C 33 33
234 Bosnia_and_Herzegovina 12077 A 33 33
235 Bosnia_and_Herzegovina 12078 G 33 33
236 Bosnia_and_Herzegovina 12079 G 33 33
237 Bosnia_and_Herzegovina 12080 G 33 33
238 Bosnia_and_Herzegovina 12081 C 33 33
239 Bosnia_and_Herzegovina 12082 A 33 33
240 Bosnia_and_Herzegovina 12083 A 33 33
241 Bosnia_and_Herzegovina 12084 C 33 33
242 Bosnia_and_Herzegovina 12085 C 33 33
243 Bosnia_and_Herzegovina 12086 T 33 33
244 Bosnia_and_Herzegovina 12087 T 33 33
245 Bosnia_and_Herzegovina 12088 A 33 33
246 Bosnia_and_Herzegovina 12089 C 33 33
247 Bosnia_and_Herzegovina 12090 A 33 33
248 Bosnia_and_Herzegovina 12091 A 33 33