National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A C D E F G H I K L M N P Q R S T V W Y
*                                              
-     870                                        
?                                              
A     60 4   3                         2   5    
C     30   1                                   1
D     24     2     1           1                
E 1   9           1                            
F     66         5         3                   1
G     45 1     1   1                 1 5   1    
H     12                                       1
I     48               1     1           1 2    
K     36       1         3     2   1            
L     123         5     1   10               1    
M     51               6                        
N     30                 1     1                
P     21                         2 1     1      
Q     21             1   1           2          
R     27               2             3 1        
S 1   51                               3       2
T     63 1             3                 2      
V     84 2       3     3     1             8    
W 1   18                   1                    
Y     51                                       3

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 South_Africa 10973 A 2942 2942
1 South_Africa 10974 G 2942 2942
2 South_Africa 10975 T 2942 2942
3 South_Africa 10976 G 2942 2942
4 South_Africa 10977 C T 2942 2939 Ala3571Val
5 South_Africa 10978 A 2942 2942
6 South_Africa 10979 G 2942 2942
7 South_Africa 10980 T 2942 2942
8 South_Africa 10981 G 2942 2942
9 South_Africa 10982 A 2942 2942
10 South_Africa 10983 A 2942 2942
11 South_Africa 10984 A 2942 2942
12 South_Africa 10985 A 2942 2942
13 South_Africa 10986 G T 2942 2941 Arg3574Ile
14 South_Africa 10987 A 2942 2942
15 South_Africa 10988 A 2942 2942
16 South_Africa 10989 C 2942 2941
17 South_Africa 10990 A 2942 2939
18 South_Africa 10991 A 2942 2938
19 South_Africa 10992 T 2942 2938
20 South_Africa 10993 C 2942 2938
21 South_Africa 10994 A C,G 2942 2929 Lys3577Gln-p.Lys3577Glu
22 South_Africa 10995 A 2942 2937
23 South_Africa 10996 G A 2942 2937 Lys3577Lys
24 South_Africa 10997 G 2942 2938
25 South_Africa 10998 G C 2943 2938 Gly3578Ala
26 South_Africa 10999 T 2944 2940
27 South_Africa 11000 A 2944 2940
28 South_Africa 11001 C T 2944 2937 Thr3579Ile
29 South_Africa 11002 A 2945 2942
30 South_Africa 11003 C T 2946 2935 His3580Tyr
31 South_Africa 11004 A 2947 2944
32 South_Africa 11005 C 2954 2953
33 South_Africa 11006 C 2954 2951
34 South_Africa 11007 A 2956 2953
35 South_Africa 11008 C 2956 2953
36 South_Africa 11009 T 2956 2954
37 South_Africa 11010 G A 2963 2961 Trp3582*
38 South_Africa 11011 G 2964 2963
39 South_Africa 11012 T 2965 2965
40 South_Africa 11013 T 2966 2966
41 South_Africa 11014 G 2966 2966
42 South_Africa 11015 T 2966 2966
43 South_Africa 11016 T 2966 2966
44 South_Africa 11017 A 2966 2966
45 South_Africa 11018 C 2966 2966
46 South_Africa 11019 T 2966 2966
47 South_Africa 11020 C T,A 2966 2957 Leu3585Leu-p.Leu3585Leu
48 South_Africa 11021 A 2966 2966
49 South_Africa 11022 C 2967 2967
50 South_Africa 11023 A 2967 2967
51 South_Africa 11024 A 2968 2968
52 South_Africa 11025 T 2972 2972
53 South_Africa 11026 T C 2972 2970 Ile3587Ile
54 South_Africa 11027 T 2974 2974
55 South_Africa 11028 T 2974 2974
56 South_Africa 11029 G 2974 2974
57 South_Africa 11030 A 2974 2974
58 South_Africa 11031 C 2974 2974
59 South_Africa 11032 T 2974 2974
60 South_Africa 11033 T 2974 2974
61 South_Africa 11034 C 2974 2974
62 South_Africa 11035 A 2974 2974
63 South_Africa 11036 C 2974 2973
64 South_Africa 11037 T 2974 2973
65 South_Africa 11038 T 2974 2973
66 South_Africa 11039 T 2974 2973
67 South_Africa 11040 T 2974 2973
68 South_Africa 11041 A 2974 2973
69 South_Africa 11042 G 2974 2973
70 South_Africa 11043 T C 2974 2972 Val3593Ala
71 South_Africa 11044 T 2974 2972
72 South_Africa 11045 T 2974 2972
73 South_Africa 11046 T 2974 2972
74 South_Africa 11047 A 2974 2972
75 South_Africa 11048 G 2974 2972
76 South_Africa 11049 T 2974 2970
77 South_Africa 11050 C T 2975 2969 Val3595Val
78 South_Africa 11051 C A 2975 2970 Gln3596Lys
79 South_Africa 11052 A 2975 2971
80 South_Africa 11053 G 2975 2971
81 South_Africa 11054 A 2975 2971
82 South_Africa 11055 G 2975 2972
83 South_Africa 11056 T 2975 2972
84 South_Africa 11057 A 2975 2972
85 South_Africa 11058 C 2976 2973
86 South_Africa 11059 T 2976 2973
87 South_Africa 11060 C 2976 2973
88 South_Africa 11061 A 2976 2973
89 South_Africa 11062 A 2976 2974
90 South_Africa 11063 T 2976 2975
91 South_Africa 11064 G T 2976 2973 Trp3600Leu
92 South_Africa 11065 G 2976 2974
93 South_Africa 11066 T 2977 2973
94 South_Africa 11067 C A 2977 2972 Ser3601Tyr
95 South_Africa 11068 T 2977 2973
96 South_Africa 11069 T 2976 2972
97 South_Africa 11070 T 2976 2972
98 South_Africa 11071 G C 2976 2971 Leu3602Phe
99 South_Africa 11072 T C 2976 2971 Phe3603Leu
100 South_Africa 11073 T 2976 2972
101 South_Africa 11074 C T 2976 2968 Phe3603Phe
102 South_Africa 11075 T 2976 2972
103 South_Africa 11076 T 2976 2972
104 South_Africa 11077 T 2976 2972
105 South_Africa 11078 T 2976 2972
106 South_Africa 11079 T 2976 2972
107 South_Africa 11080 T C 2976 2970 Phe3605Phe
108 South_Africa 11081 T 2976 2972
109 South_Africa 11082 T 2976 2973
110 South_Africa 11083 G T 2976 2869 Leu3606Phe
111 South_Africa 11084 T 2976 2973
112 South_Africa 11085 A 2976 2974
113 South_Africa 11086 T 2976 2974
114 South_Africa 11087 G T 2976 2973 Glu3608*
115 South_Africa 11088 A G 2976 2973 Glu3608Gly
116 South_Africa 11089 A 2976 2974
117 South_Africa 11090 A 2976 2974
118 South_Africa 11091 A 2976 2974
119 South_Africa 11092 T C,A 2976 2969 Asn3609Lys-p.Asn3609Asn
120 South_Africa 11093 G T 2976 2973 Ala3610Ser
121 South_Africa 11094 C A 2976 2973 Ala3610Asp
122 South_Africa 11095 C T 2976 2965 Ala3610Ala
123 South_Africa 11096 T 2976 2974
124 South_Africa 11097 T 2976 2974
125 South_Africa 11098 T 2976 2974
126 South_Africa 11099 T A 2976 2973 Leu3612Ile
127 South_Africa 11100 T 2976 2974
128 South_Africa 11101 A 2976 2975
129 South_Africa 11102 C A 2976 2974 Pro3613Thr
130 South_Africa 11103 C 2976 2975
131 South_Africa 11104 T C 2976 2973 Pro3613Pro
132 South_Africa 11105 T 2976 2974
133 South_Africa 11106 T A 2976 2973 Phe3614Tyr
134 South_Africa 11107 T 2976 2974
135 South_Africa 11108 G 2976 2974
136 South_Africa 11109 C T,A 2976 2969 Ala3615Val-p.Ala3615Asp
137 South_Africa 11110 T A 2976 2973 Ala3615Ala
138 South_Africa 11111 A 2976 2974
139 South_Africa 11112 T 2976 2974
140 South_Africa 11113 G 2976 2975
141 South_Africa 11114 G A 2976 2973 Gly3617Ser
142 South_Africa 11115 G T 2976 2974 Gly3617Val
143 South_Africa 11116 T 2976 2975
144 South_Africa 11117 A G 2976 2970 Ile3618Val
145 South_Africa 11118 T 2976 2975
146 South_Africa 11119 T 2976 2975
147 South_Africa 11120 A 2976 2975
148 South_Africa 11121 T 2976 2975
149 South_Africa 11122 T 2976 2975
150 South_Africa 11123 G 2976 2975
151 South_Africa 11124 C A 2976 2974 Ala3620Asp
152 South_Africa 11125 T 2976 2975
153 South_Africa 11126 A 2976 2976
154 South_Africa 11127 T 2976 2976
155 South_Africa 11128 G 2976 2976
156 South_Africa 11129 T 2976 2976
157 South_Africa 11130 C A 2976 2975 Ser3622Tyr
158 South_Africa 11131 T 2976 2976
159 South_Africa 11132 G 2976 2976
160 South_Africa 11133 C 2976 2976
161 South_Africa 11134 T C 2976 2975 Ala3623Ala
162 South_Africa 11135 T 2977 2977
163 South_Africa 11136 T 2977 2977
164 South_Africa 11137 T 2977 2977
165 South_Africa 11138 G 2977 2977
166 South_Africa 11139 C T 2977 2976 Ala3625Val
167 South_Africa 11140 A 2977 2977
168 South_Africa 11141 A 2977 2977
169 South_Africa 11142 T 2977 2977
170 South_Africa 11143 G 2977 2977
171 South_Africa 11144 A 2977 2977
172 South_Africa 11145 T 2977 2977
173 South_Africa 11146 G A 2977 2976 Met3627Ile
174 South_Africa 11147 T 2977 2977
175 South_Africa 11148 T 2977 2977
176 South_Africa 11149 T 2977 2977
177 South_Africa 11150 G 2977 2977
178 South_Africa 11151 T 2977 2977
179 South_Africa 11152 C 2977 2977
180 South_Africa 11153 A 2977 2977
181 South_Africa 11154 A 2977 2977
182 South_Africa 11155 A 2978 2978
183 South_Africa 11156 C 2978 2978
184 South_Africa 11157 A 2978 2978
185 South_Africa 11158 T 2978 2978
186 South_Africa 11159 A 2978 2978
187 South_Africa 11160 A 2978 2978
188 South_Africa 11161 G T 2978 2977 Lys3632Asn
189 South_Africa 11162 C 2978 2978
190 South_Africa 11163 A 2978 2978
191 South_Africa 11164 T 2978 2978
192 South_Africa 11165 G 2978 2978
193 South_Africa 11166 C 2978 2978
194 South_Africa 11167 A 2978 2978
195 South_Africa 11168 T 2978 2978
196 South_Africa 11169 T 2978 2978
197 South_Africa 11170 T 2978 2978
198 South_Africa 11171 C 2978 2978
199 South_Africa 11172 T 2978 2977
200 South_Africa 11173 C T 2978 2976 Leu3636Leu
201 South_Africa 11174 T 2978 2977
202 South_Africa 11175 G 2978 2977
203 South_Africa 11176 T 2978 2977
204 South_Africa 11177 T 2978 2977
205 South_Africa 11178 T 2978 2977
206 South_Africa 11179 G 2978 2977
207 South_Africa 11180 T 2978 2977
208 South_Africa 11181 T 2978 2977
209 South_Africa 11182 T 2978 2977
210 South_Africa 11183 T 2978 2977
211 South_Africa 11184 T 2978 2977
212 South_Africa 11185 G 2979 2978
213 South_Africa 11186 T C 2979 2976 Leu3641Leu
214 South_Africa 11187 T 2979 2978
215 South_Africa 11188 A 2979 2978
216 South_Africa 11189 C 2979 2978
217 South_Africa 11190 C 2979 2978
218 South_Africa 11191 T 2979 2978
219 South_Africa 11192 T 2979 2979
220 South_Africa 11193 C 2979 2979
221 South_Africa 11194 T 2979 2979
222 South_Africa 11195 C T 2979 2966 Leu3644Phe
223 South_Africa 11196 T 2979 2978
224 South_Africa 11197 T 2979 2978
225 South_Africa 11198 G 2979 2978
226 South_Africa 11199 C 2979 2978
227 South_Africa 11200 C 2979 2978
228 South_Africa 11201 A 2979 2978
229 South_Africa 11202 C 2979 2977
230 South_Africa 11203 T 2979 2978
231 South_Africa 11204 G A 2979 2966 Val3647Ile
232 South_Africa 11205 T 2979 2978
233 South_Africa 11206 A 2979 2978
234 South_Africa 11207 G T 2979 2977 Ala3648Ser
235 South_Africa 11208 C 2979 2978
236 South_Africa 11209 T 2979 2978
237 South_Africa 11210 T 2979 2978
238 South_Africa 11211 A 2979 2978
239 South_Africa 11212 T 2979 2978
240 South_Africa 11213 T 2979 2978
241 South_Africa 11214 T 2980 2979
242 South_Africa 11215 T 2980 2980
243 South_Africa 11216 A 2980 2980
244 South_Africa 11217 A 2980 2980
245 South_Africa 11218 T 2980 2980
246 South_Africa 11219 A 2980 2980
247 South_Africa 11220 T 2980 2980
248 South_Africa 11221 G T 2980 2977 Met3652Ile
249 South_Africa 11222 G T 2981 2980 Val3653Phe
250 South_Africa 11223 T 2981 2981
251 South_Africa 11224 C T 2981 2979 Val3653Val
252 South_Africa 11225 T 2981 2981
253 South_Africa 11226 A 2981 2981
254 South_Africa 11227 T 2981 2981
255 South_Africa 11228 A 2981 2981
256 South_Africa 11229 T 2981 2981
257 South_Africa 11230 G T 2981 2890 Met3655Ile
258 South_Africa 11231 C 2981 2981
259 South_Africa 11232 C 2981 2981
260 South_Africa 11233 T 2981 2981
261 South_Africa 11234 G 2981 2981
262 South_Africa 11235 C T 2981 2980 Ala3657Val
263 South_Africa 11236 T 2981 2981
264 South_Africa 11237 A 2981 2981
265 South_Africa 11238 G 2982 2982
266 South_Africa 11239 T 2981 2981
267 South_Africa 11240 T 2981 2981
268 South_Africa 11241 G 2981 2981
269 South_Africa 11242 G 2981 2981
270 South_Africa 11243 G A 2981 2980 Val3660Met
271 South_Africa 11244 T 2981 2981
272 South_Africa 11245 G 2981 2981
273 South_Africa 11246 A 2981 2981
274 South_Africa 11247 T 2981 2981
275 South_Africa 11248 G 2981 2981
276 South_Africa 11249 C 2981 2981
277 South_Africa 11250 G 2981 2981
278 South_Africa 11251 T 2981 2981
279 South_Africa 11252 A 2981 2981
280 South_Africa 11253 T 2981 2981
281 South_Africa 11254 T 2981 2981
282 South_Africa 11255 A 2981 2981
283 South_Africa 11256 T 2981 2981
284 South_Africa 11257 G 2981 2981
285 South_Africa 11258 A 2981 2981
286 South_Africa 11259 C T 2981 2980 Thr3665Ile
287 South_Africa 11260 A G 2981 2980 Thr3665Thr
288 South_Africa 11261 T 2981 2981
289 South_Africa 11262 G 2981 2981
290 South_Africa 11263 G 2981 2981
291 South_Africa 11264 T 2981 2981
292 South_Africa 11265 T 2981 2981
293 South_Africa 11266 G 2981 2981
294 South_Africa 11267 G 2981 2981
295 South_Africa 11268 A 2981 2981
296 South_Africa 11269 T 2981 2981
297 South_Africa 11270 A 2981 2981
298 South_Africa 11271 T 2981 2981
299 South_Africa 11272 G 2981 2981
300 South_Africa 11273 G 2696 2696
301 South_Africa 11274 T 2696 2696
302 South_Africa 11275 T 2695 2695
303 South_Africa 11276 G 2695 2695
304 South_Africa 11277 A 2695 2695
305 South_Africa 11278 T 2695 2695
306 South_Africa 11279 A G 2695 2694 Thr3672Ala
307 South_Africa 11280 C 2695 2695
308 South_Africa 11281 T 2695 2695
309 South_Africa 11282 A 2695 2695
310 South_Africa 11283 G 2695 2695
311 South_Africa 11284 T 2695 2695
312 South_Africa 11285 T G 2695 2693 Leu3674Val
313 South_Africa 11286 T 2695 2695
314 South_Africa 11287 G 2695 2695
315 South_Africa 11288 T 2695 2693
316 South_Africa 11289 C 2695 2693
317 South_Africa 11290 T 2695 2693
318 South_Africa 11291 G A 2695 2690 Gly3676Ser
319 South_Africa 11292 G 2695 2693
320 South_Africa 11293 T 2695 2693
321 South_Africa 11294 T 2695 2692
322 South_Africa 11295 T 2695 2692
323 South_Africa 11296 T G 2695 2691 Phe3677Leu
324 South_Africa 11297 A 2695 2694
325 South_Africa 11298 A 2695 2694
326 South_Africa 11299 G 2696 2694
327 South_Africa 11300 C 2696 2694
328 South_Africa 11301 T 2696 2694
329 South_Africa 11302 A 2696 2694
330 South_Africa 11303 A 2696 2694
331 South_Africa 11304 A 2696 2694
332 South_Africa 11305 A 2696 2694
333 South_Africa 11306 G 2696 2694
334 South_Africa 11307 A 2696 2694
335 South_Africa 11308 C T 2696 2693 Asp3681Asp
336 South_Africa 11309 T 2696 2691
337 South_Africa 11310 G A 2697 2689 Cys3682Tyr
338 South_Africa 11311 T 2698 2694
339 South_Africa 11312 G 2701 2699
340 South_Africa 11313 T 2701 2699
341 South_Africa 11314 T 2701 2699
342 South_Africa 11315 A 2706 2705
343 South_Africa 11316 T 2706 2705
344 South_Africa 11317 G 2707 2706
345 South_Africa 11318 T 2707 2706
346 South_Africa 11319 A 2707 2706
347 South_Africa 11320 T 2708 2707
348 South_Africa 11321 G 2708 2707
349 South_Africa 11322 C 2708 2707
350 South_Africa 11323 A 2708 2707
351 South_Africa 11324 T 2708 2707
352 South_Africa 11325 C 2708 2708
353 South_Africa 11326 A T,G 2708 2705 Ser3687Ser-p.Ser3687Ser
354 South_Africa 11327 G 2708 2708
355 South_Africa 11328 C 2708 2708
356 South_Africa 11329 T 2708 2708
357 South_Africa 11330 G 2708 2708
358 South_Africa 11331 T 2708 2708
359 South_Africa 11332 A 2708 2708
360 South_Africa 11333 G 2994 2994
361 South_Africa 11334 T 2994 2994
362 South_Africa 11335 G T 2994 2990 Val3690Val
363 South_Africa 11336 T 2994 2994
364 South_Africa 11337 T 2994 2994
365 South_Africa 11338 A 2994 2994
366 South_Africa 11339 C T 2994 2992 Leu3692Leu
367 South_Africa 11340 T 2994 2994
368 South_Africa 11341 A 2994 2994
369 South_Africa 11342 A 2994 2994
370 South_Africa 11343 T C 2994 2992 Ile3693Thr
371 South_Africa 11344 C 2994 2994
372 South_Africa 11345 C T 2994 2986 Leu3694Phe
373 South_Africa 11346 T 2994 2994
374 South_Africa 11347 T 2994 2994
375 South_Africa 11348 A 2994 2994
376 South_Africa 11349 T 2994 2994
377 South_Africa 11350 G 2994 2994
378 South_Africa 11351 A 2994 2994
379 South_Africa 11352 C 2994 2994
380 South_Africa 11353 A 2994 2994
381 South_Africa 11354 G 2994 2994
382 South_Africa 11355 C 2994 2994
383 South_Africa 11356 A 2994 2994
384 South_Africa 11357 A C 2994 2992 Arg3698Arg
385 South_Africa 11358 G 2994 2993
386 South_Africa 11359 A G 2994 2992 Arg3698Arg
387 South_Africa 11360 A 2994 2993
388 South_Africa 11361 C 2994 2993
389 South_Africa 11362 T C 2994 2984 Thr3699Thr
390 South_Africa 11363 G 2994 2994
391 South_Africa 11364 T 2994 2994
392 South_Africa 11365 G T,C 2994 2988 Val3700Val-p.Val3700Val
393 South_Africa 11366 T 2994 2994
394 South_Africa 11367 A 2994 2994
395 South_Africa 11368 T 2994 2994
396 South_Africa 11369 G 2994 2994
397 South_Africa 11370 A 2994 2994
398 South_Africa 11371 T 2994 2994
399 South_Africa 11372 G 2994 2994
400 South_Africa 11373 A 2994 2994
401 South_Africa 11374 T C 2994 2993 Asp3703Asp
402 South_Africa 11375 G A 2994 2983 Gly3704Ser
403 South_Africa 11376 G 2994 2994
404 South_Africa 11377 T 2994 2994
405 South_Africa 11378 G 2994 2994
406 South_Africa 11379 C T 2994 2990 Ala3705Val
407 South_Africa 11380 T 2994 2994
408 South_Africa 11381 A 2994 2994
409 South_Africa 11382 G 2994 2994
410 South_Africa 11383 G 2994 2994
411 South_Africa 11384 A 2994 2994
412 South_Africa 11385 G 2994 2994
413 South_Africa 11386 A 2993 2993
414 South_Africa 11387 G 2993 2993
415 South_Africa 11388 T C 2992 2991 Val3708Ala
416 South_Africa 11389 G 2992 2992
417 South_Africa 11390 T 2970 2969
418 South_Africa 11391 G 2940 2938
419 South_Africa 11392 G 2936 2934
420 South_Africa 11393 A 2928 2926
421 South_Africa 11394 C 2924 2922
422 South_Africa 11395 A 2917 2914
423 South_Africa 11396 C 2913 2910
424 South_Africa 11397 T 2912 2909
425 South_Africa 11398 T 2911 2908
426 South_Africa 11399 A 2911 2908
427 South_Africa 11400 T 2911 2908
428 South_Africa 11401 G T 2910 2902 Met3712Ile
429 South_Africa 11402 A 2910 2907
430 South_Africa 11403 A 2910 2907
431 South_Africa 11404 T 2910 2907
432 South_Africa 11405 G 2910 2906
433 South_Africa 11406 T 2910 2907
434 South_Africa 11407 C 2909 2906
435 South_Africa 11408 T 2909 2907
436 South_Africa 11409 T 2909 2907
437 South_Africa 11410 G 2909 2907
438 South_Africa 11411 A 2909 2907
439 South_Africa 11412 C 2909 2907
440 South_Africa 11413 A 2909 2907
441 South_Africa 11414 C 2909 2907
442 South_Africa 11415 T 2909 2907
443 South_Africa 11416 C 2909 2908
444 South_Africa 11417 G T,A 2909 2895 Val3718Phe-p.Val3718Ile
445 South_Africa 11418 T 2909 2909
446 South_Africa 11419 T 2909 2909
447 South_Africa 11420 T 2909 2909
448 South_Africa 11421 A 2909 2909
449 South_Africa 11422 T 2909 2909
450 South_Africa 11423 A 2909 2909
451 South_Africa 11424 A 2909 2909
452 South_Africa 11425 A 2908 2908
453 South_Africa 11426 G T 2908 2907 Val3721Phe
454 South_Africa 11427 T 2908 2908
455 South_Africa 11428 T 2908 2908
456 South_Africa 11429 T 2908 2908
457 South_Africa 11430 A 2908 2908
458 South_Africa 11431 T 2907 2907
459 South_Africa 11432 T 2907 2907
460 South_Africa 11433 A 2907 2907
461 South_Africa 11434 T 2907 2907
462 South_Africa 11435 G 2907 2907
463 South_Africa 11436 G 2907 2907
464 South_Africa 11437 T 2907 2905
465 South_Africa 11438 A 2907 2905
466 South_Africa 11439 A 2907 2905
467 South_Africa 11440 T 2907 2905
468 South_Africa 11441 G 2907 2905
469 South_Africa 11442 C 2907 2906
470 South_Africa 11443 T 2907 2905
471 South_Africa 11444 T 2907 2906
472 South_Africa 11445 T 2907 2906
473 South_Africa 11446 A G 2907 2905 Leu3727Leu
474 South_Africa 11447 G A 2907 2762 Asp3728Asn
475 South_Africa 11448 A 2907 2906
476 South_Africa 11449 T 2907 2906
477 South_Africa 11450 C 2906 2901
478 South_Africa 11451 A G 2906 2900 Gln3729Arg
479 South_Africa 11452 A 2906 2902
480 South_Africa 11453 G 2906 2902
481 South_Africa 11454 C 2906 2902
482 South_Africa 11455 C T 2906 2887 Ala3730Ala
483 South_Africa 11456 A 2906 2902
484 South_Africa 11457 T 2906 2902
485 South_Africa 11458 T 2906 2902
486 South_Africa 11459 T 2906 2902
487 South_Africa 11460 C 2906 2901
488 South_Africa 11461 C 2906 2901
489 South_Africa 11462 A 2906 2901
490 South_Africa 11463 T 2906 2901
491 South_Africa 11464 G 2906 2901
492 South_Africa 11465 T 2906 2901
493 South_Africa 11466 G 2906 2901
494 South_Africa 11467 G 2906 2901
495 South_Africa 11468 G 2906 2901
496 South_Africa 11469 C 2906 2901
497 South_Africa 11470 T 2906 2901
498 South_Africa 11471 C 2906 2902
499 South_Africa 11472 T 2906 2902
500 South_Africa 11473 T 2906 2902
501 South_Africa 11474 A 2906 2902
502 South_Africa 11475 T 2906 2902
503 South_Africa 11476 A G 2906 2901 Ile3737Met
504 South_Africa 11477 A 2906 2902
505 South_Africa 11478 T 2906 2902
506 South_Africa 11479 C 2906 2902
507 South_Africa 11480 T 2905 2899
508 South_Africa 11481 C 2905 2899
509 South_Africa 11482 T 2905 2899
510 South_Africa 11483 G 2905 2899
511 South_Africa 11484 T 2905 2899
512 South_Africa 11485 T 2905 2900
513 South_Africa 11486 A 2905 2900
514 South_Africa 11487 C 2905 2902
515 South_Africa 11488 T 2905 2902
516 South_Africa 11489 T 2905 2902
517 South_Africa 11490 C 2905 2902
518 South_Africa 11491 T 2905 2902
519 South_Africa 11492 A 2905 2904
520 South_Africa 11493 A 2905 2904
521 South_Africa 11494 C 2905 2904
522 South_Africa 11495 T 2905 2904
523 South_Africa 11496 A 2905 2904
524 South_Africa 11497 C 2905 2904
525 South_Africa 11498 T 2905 2904
526 South_Africa 11499 C A 2905 2903 Ser3745*
527 South_Africa 11500 A 2905 2904
528 South_Africa 11501 G C 2905 2903 Gly3746Arg
529 South_Africa 11502 G 2905 2904
530 South_Africa 11503 T 2905 2904
531 South_Africa 11504 G 2905 2904
532 South_Africa 11505 T 2905 2904
533 South_Africa 11506 A 2904 2903
534 South_Africa 11507 G 2904 2903
535 South_Africa 11508 T 2904 2903
536 South_Africa 11509 T 2904 2903
537 South_Africa 11510 A 2904 2903
538 South_Africa 11511 C 2904 2903
539 South_Africa 11512 A 2904 2903
540 South_Africa 11513 A 2904 2902
541 South_Africa 11514 C 2904 2901
542 South_Africa 11515 T 2904 2900
543 South_Africa 11516 G 2904 2901
544 South_Africa 11517 T 2904 2901
545 South_Africa 11518 C T 2904 2899 Val3751Val
546 South_Africa 11519 A 2904 2901
547 South_Africa 11520 T 2904 2901
548 South_Africa 11521 G T 2904 2896 Met3752Ile
549 South_Africa 11522 T 2904 2901
550 South_Africa 11523 T 2904 2901
551 South_Africa 11524 T 2904 2901
552 South_Africa 11525 T 2904 2901
553 South_Africa 11526 T 2904 2900
554 South_Africa 11527 G 2904 2900
555 South_Africa 11528 G 2904 2900
556 South_Africa 11529 C 2904 2900
557 South_Africa 11530 C 2904 2900
558 South_Africa 11531 A 2904 2900
559 South_Africa 11532 G 2904 2900
560 South_Africa 11533 A 2904 2900
561 South_Africa 11534 G A 2904 2899 Gly3757Ser
562 South_Africa 11535 G 2904 2904
563 South_Africa 11536 T 2904 2904
564 South_Africa 11537 A G 2904 2901 Ile3758Val
565 South_Africa 11538 T 2904 2903
566 South_Africa 11539 T 2904 2903
567 South_Africa 11540 G 2904 2902
568 South_Africa 11541 T 2904 2902
569 South_Africa 11542 T 2904 2902
570 South_Africa 11543 T 2904 2902
571 South_Africa 11544 T 2904 2902
572 South_Africa 11545 T C 2904 2901 Phe3760Phe
573 South_Africa 11546 A 2904 2902
574 South_Africa 11547 T 2904 2902
575 South_Africa 11548 G 2904 2902
576 South_Africa 11549 T 2904 2902
577 South_Africa 11550 G 2904 2904
578 South_Africa 11551 T 2904 2904
579 South_Africa 11552 G 2904 2904
580 South_Africa 11553 T 2904 2904
581 South_Africa 11554 T A 2904 2903 Val3763Val
582 South_Africa 11555 G 2904 2904
583 South_Africa 11556 A 2904 2904
584 South_Africa 11557 G 2904 2904
585 South_Africa 11558 T 2904 2904
586 South_Africa 11559 A 2904 2904
587 South_Africa 11560 T 2904 2904
588 South_Africa 11561 T 2904 2901
589 South_Africa 11562 G 2904 2904
590 South_Africa 11563 C T 2904 2902 Cys3766Cys
591 South_Africa 11564 C 2904 2904
592 South_Africa 11565 C 2904 2904
593 South_Africa 11566 T 2904 2904
594 South_Africa 11567 A 2904 2904
595 South_Africa 11568 T 2904 2904
596 South_Africa 11569 T 2904 2904
597 South_Africa 11570 T C 2904 2903 Phe3769Leu
598 South_Africa 11571 T 2904 2904
599 South_Africa 11572 C T 2904 2903 Phe3769Phe
600 South_Africa 11573 T 2904 2904
601 South_Africa 11574 T 2904 2904
602 South_Africa 11575 C T 2904 2903 Phe3770Phe
603 South_Africa 11576 A 2904 2904
604 South_Africa 11577 T 2904 2904
605 South_Africa 11578 A 2904 2904
606 South_Africa 11579 A 2904 2904
607 South_Africa 11580 C 2904 2904
608 South_Africa 11581 T 2904 2904
609 South_Africa 11582 G 2904 2904
610 South_Africa 11583 G 2904 2904
611 South_Africa 11584 T 2904 2904
612 South_Africa 11585 A 2904 2904
613 South_Africa 11586 A 2904 2904
614 South_Africa 11587 T 2904 2904
615 South_Africa 11588 A 2904 2904
616 South_Africa 11589 C 2904 2904
617 South_Africa 11590 A 2904 2904
618 South_Africa 11591 C 2904 2904
619 South_Africa 11592 T 2904 2904
620 South_Africa 11593 T 2904 2904
621 South_Africa 11594 C 2904 2904
622 South_Africa 11595 A G 2904 2903 Gln3777Arg
623 South_Africa 11596 G 2904 2904
624 South_Africa 11597 T 2904 2904
625 South_Africa 11598 G 2904 2904
626 South_Africa 11599 T 2904 2904
627 South_Africa 11600 A 2904 2904
628 South_Africa 11601 T 2904 2904
629 South_Africa 11602 A 2904 2904
630 South_Africa 11603 A 2904 2904
631 South_Africa 11604 T 2904 2904
632 South_Africa 11605 G T 2904 2903 Met3780Ile
633 South_Africa 11606 C 2904 2904
634 South_Africa 11607 T 2904 2904
635 South_Africa 11608 A G 2904 2903 Leu3781Leu
636 South_Africa 11609 G 2904 2904
637 South_Africa 11610 T 2904 2904
638 South_Africa 11611 T 2904 2904
639 South_Africa 11612 T 2904 2904
640 South_Africa 11613 A 2904 2904
641 South_Africa 11614 T 2904 2904
642 South_Africa 11615 T 2904 2904
643 South_Africa 11616 G 2904 2904
644 South_Africa 11617 T 2904 2904
645 South_Africa 11618 T 2904 2904
646 South_Africa 11619 T 2904 2904
647 South_Africa 11620 C 2904 2904
648 South_Africa 11621 T 2904 2904
649 South_Africa 11622 T 2904 2904
650 South_Africa 11623 A 2904 2904
651 South_Africa 11624 G 2904 2904
652 South_Africa 11625 G 2904 2904
653 South_Africa 11626 C 2904 2904
654 South_Africa 11627 T 2904 2904
655 South_Africa 11628 A 2904 2904
656 South_Africa 11629 T C 2904 2899 Tyr3788Tyr
657 South_Africa 11630 T 2904 2904
658 South_Africa 11631 T 2904 2904
659 South_Africa 11632 T 2904 2904
660 South_Africa 11633 T 2904 2904
661 South_Africa 11634 G 2904 2904
662 South_Africa 11635 T 2904 2904
663 South_Africa 11636 A 2904 2904
664 South_Africa 11637 C 2904 2904
665 South_Africa 11638 T 2904 2904
666 South_Africa 11639 T 2904 2904
667 South_Africa 11640 G 2904 2904
668 South_Africa 11641 T 2904 2904
669 South_Africa 11642 T 2904 2904
670 South_Africa 11643 A 2904 2904
671 South_Africa 11644 C 2904 2904
672 South_Africa 11645 T 2904 2904
673 South_Africa 11646 T 2904 2904
674 South_Africa 11647 T 2904 2904
675 South_Africa 11648 G 2904 2904
676 South_Africa 11649 G 2904 2904
677 South_Africa 11650 C 2904 2904
678 South_Africa 11651 C 2904 2904
679 South_Africa 11652 T 2904 2904
680 South_Africa 11653 C T 2904 2886 Leu3796Leu
681 South_Africa 11654 T 2904 2904
682 South_Africa 11655 T 2904 2904
683 South_Africa 11656 T 2904 2904
684 South_Africa 11657 T 2904 2904
685 South_Africa 11658 G 2904 2904
686 South_Africa 11659 T 2904 2904
687 South_Africa 11660 T 2904 2904
688 South_Africa 11661 T 2904 2904
689 South_Africa 11662 A 2904 2904
690 South_Africa 11663 C 2904 2904
691 South_Africa 11664 T 2904 2904
692 South_Africa 11665 C 2904 2904
693 South_Africa 11666 A 2904 2904
694 South_Africa 11667 A 2904 2904
695 South_Africa 11668 C 2904 2904
696 South_Africa 11669 C A 2904 2903 Arg3802Ser
697 South_Africa 11670 G 2904 2904
698 South_Africa 11671 C T 2904 2902 Arg3802Arg
699 South_Africa 11672 T 2904 2904
700 South_Africa 11673 A 2904 2904
701 South_Africa 11674 C T 2904 2903 Tyr3803Tyr
702 South_Africa 11675 T 2904 2904
703 South_Africa 11676 T 2904 2904
704 South_Africa 11677 T 2904 2904
705 South_Africa 11678 A 2904 2904
706 South_Africa 11679 G 2904 2904
707 South_Africa 11680 A 2904 2904
708 South_Africa 11681 C 2904 2904
709 South_Africa 11682 T 2903 2903
710 South_Africa 11683 G 2903 2903
711 South_Africa 11684 A 2903 2903
712 South_Africa 11685 C 2903 2903
713 South_Africa 11686 T 2903 2903
714 South_Africa 11687 C 2903 2903
715 South_Africa 11688 T 2903 2903
716 South_Africa 11689 T 2903 2903
717 South_Africa 11690 G 2903 2903
718 South_Africa 11691 G 2903 2903
719 South_Africa 11692 T 2903 2903
720 South_Africa 11693 G 2903 2903
721 South_Africa 11694 T 2902 2901
722 South_Africa 11695 T G 2902 2900 Val3810Val
723 South_Africa 11696 T 2901 2900
724 South_Africa 11697 A 2901 2900
725 South_Africa 11698 T 2901 2900
726 South_Africa 11699 G 2901 2900
727 South_Africa 11700 A 2901 2900
728 South_Africa 11701 T 2901 2900
729 South_Africa 11702 T 2901 2900
730 South_Africa 11703 A 2901 2900
731 South_Africa 11704 C T 2901 2899 Tyr3813Tyr
732 South_Africa 11705 T 2901 2900
733 South_Africa 11706 T 2901 2900
734 South_Africa 11707 A 2901 2900
735 South_Africa 11708 G 2901 2900
736 South_Africa 11709 T 2901 2900
737 South_Africa 11710 T 2901 2900
738 South_Africa 11711 T 2901 2900
739 South_Africa 11712 C 2901 2900
740 South_Africa 11713 T 2901 2900
741 South_Africa 11714 A 2901 2900
742 South_Africa 11715 C 2901 2900
743 South_Africa 11716 A 2901 2900
744 South_Africa 11717 C 2901 2900
745 South_Africa 11718 A 2901 2900
746 South_Africa 11719 G 2901 2900
747 South_Africa 11720 G 2901 2900
748 South_Africa 11721 A 2901 2900
749 South_Africa 11722 G 2901 2900
750 South_Africa 11723 T 2901 2900
751 South_Africa 11724 T 2901 2900
752 South_Africa 11725 T 2901 2900
753 South_Africa 11726 A 2901 2900
754 South_Africa 11727 G T 2901 2898 Arg3821Ile
755 South_Africa 11728 A 2901 2900
756 South_Africa 11729 T 2901 2900
757 South_Africa 11730 A 2901 2900
758 South_Africa 11731 T 2901 2900
759 South_Africa 11732 A 2901 2900
760 South_Africa 11733 T 2901 2900
761 South_Africa 11734 G 2901 2900
762 South_Africa 11735 A 2901 2900
763 South_Africa 11736 A 2901 2900
764 South_Africa 11737 T 2901 2900
765 South_Africa 11738 T 2901 2900
766 South_Africa 11739 C 2901 2900
767 South_Africa 11740 A 2901 2900
768 South_Africa 11741 C 2901 2900
769 South_Africa 11742 A 2901 2900
770 South_Africa 11743 G T 2901 2899 Gln3826His
771 South_Africa 11744 G 2901 2901
772 South_Africa 11745 G A 2901 2900 Gly3827Glu
773 South_Africa 11746 A 2901 2901
774 South_Africa 11747 C T 2901 2899 Leu3828Leu
775 South_Africa 11748 T 2901 2901
776 South_Africa 11749 A 2901 2901
777 South_Africa 11750 C 2901 2901
778 South_Africa 11751 T 2901 2901
779 South_Africa 11752 C T 2901 2900 Leu3829Leu
780 South_Africa 11753 C 2901 2901
781 South_Africa 11754 C A 2901 2900 Pro3830Gln
782 South_Africa 11755 A 2901 2901
783 South_Africa 11756 C 2901 2901
784 South_Africa 11757 C 2901 2901
785 South_Africa 11758 C T 2901 2899 Pro3831Pro
786 South_Africa 11759 A 2901 2901
787 South_Africa 11760 A 2901 2901
788 South_Africa 11761 G T 2901 2900 Lys3832Asn
789 South_Africa 11762 A 2901 2901
790 South_Africa 11763 A 2901 2901
791 South_Africa 11764 T 2901 2901
792 South_Africa 11765 A 2901 2901
793 South_Africa 11766 G 2901 2901
794 South_Africa 11767 C T 2901 2900 Ser3834Ser
795 South_Africa 11768 A 2901 2901
796 South_Africa 11769 T 2901 2901
797 South_Africa 11770 A 2901 2901
798 South_Africa 11771 G 2901 2901
799 South_Africa 11772 A G 2901 2895 Asp3836Gly
800 South_Africa 11773 T 2901 2901
801 South_Africa 11774 G 2901 2901
802 South_Africa 11775 C 2901 2901
803 South_Africa 11776 C 2901 2901
804 South_Africa 11777 T 2901 2901
805 South_Africa 11778 T 2901 2901
806 South_Africa 11779 C 2901 2901
807 South_Africa 11780 A 2901 2901
808 South_Africa 11781 A 2901 2901
809 South_Africa 11782 A G 2901 2896 Lys3839Lys
810 South_Africa 11783 C 2901 2901
811 South_Africa 11784 T 2901 2901
812 South_Africa 11785 C 2901 2901
813 South_Africa 11786 A 2901 2901
814 South_Africa 11787 A 2901 2901
815 South_Africa 11788 C 2901 2901
816 South_Africa 11789 A 2901 2901
817 South_Africa 11790 T 2901 2901
818 South_Africa 11791 T 2901 2901
819 South_Africa 11792 A 2901 2901
820 South_Africa 11793 A 2901 2901
821 South_Africa 11794 A G 2901 2900 Lys3843Lys
822 South_Africa 11795 T 2901 2901
823 South_Africa 11796 T 2901 2901
824 South_Africa 11797 G 2901 2901
825 South_Africa 11798 T 2901 2901
826 South_Africa 11799 T 2901 2901
827 South_Africa 11800 G T 2901 2900 Leu3845Phe
828 South_Africa 11801 G A 2901 2895 Gly3846Ser
829 South_Africa 11802 G 2901 2901
830 South_Africa 11803 T 2901 2901
831 South_Africa 11804 G 2901 2901
832 South_Africa 11805 T 2901 2901
833 South_Africa 11806 T 2901 2901
834 South_Africa 11807 G 2901 2901
835 South_Africa 11808 G 2901 2901
836 South_Africa 11809 T 2901 2901
837 South_Africa 11810 G 2901 2901
838 South_Africa 11811 G 2901 2901
839 South_Africa 11812 C A 2901 2892 Gly3849Gly
840 South_Africa 11813 A 2901 2901
841 South_Africa 11814 A 2901 2901
842 South_Africa 11815 A 2901 2901
843 South_Africa 11816 C 2901 2901
844 South_Africa 11817 C 2901 2901
845 South_Africa 11818 T 2901 2901
846 South_Africa 11819 T 2901 2901
847 South_Africa 11820 G 2901 2901
848 South_Africa 11821 T 2901 2901
849 South_Africa 11822 A 2901 2901
850 South_Africa 11823 T 2901 2901
851 South_Africa 11824 C 2901 2901
852 South_Africa 11825 A 2901 2901
853 South_Africa 11826 A 2901 2901
854 South_Africa 11827 A 2901 2901
855 South_Africa 11828 G 2901 2901
856 South_Africa 11829 T 2901 2901
857 South_Africa 11830 A 2901 2901
858 South_Africa 11831 G 2901 2901
859 South_Africa 11832 C 2901 2901
860 South_Africa 11833 C 2901 2901
861 South_Africa 11834 A 2901 2901
862 South_Africa 11835 C T 2901 2900 Thr3857Ile
863 South_Africa 11836 T 2901 2901
864 South_Africa 11837 G A 2901 2899 Val3858Ile
865 South_Africa 11838 T 2901 2901
866 South_Africa 11839 A 2901 2901
867 South_Africa 11840 C 2901 2901
868 South_Africa 11841 A 2901 2901
869 South_Africa 11842 G 2901 2901