National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   416                                        
?                                            
A   38                                        
C   39                                        
D   21                                        
E   12                                        
F   15                                        
G   39                                        
H   9                                        
I   12                                        
K   24                                        
L   24                                        
M   12                                        
N   21                                        
P   24                                        
Q   18                                        
R   6                                        
S   18                                        
T   39                                        
V   27                                        
W   3                                        
Y   15                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Uzbekistan 13026 C <*> 2 2
1 Uzbekistan 13027 T <*> 2 2
2 Uzbekistan 13028 G <*> 2 2
3 Uzbekistan 13029 G <*> 2 2
4 Uzbekistan 13030 T <*> 2 2
5 Uzbekistan 13031 A <*> 2 2
6 Uzbekistan 13032 A <*> 2 2
7 Uzbekistan 13033 T <*> 2 2
8 Uzbekistan 13034 G <*> 2 2
9 Uzbekistan 13035 C <*> 2 2
10 Uzbekistan 13036 A <*> 2 2
11 Uzbekistan 13037 A <*> 2 2
12 Uzbekistan 13038 C <*> 2 2
13 Uzbekistan 13039 A <*> 2 2
14 Uzbekistan 13040 G <*> 2 2
15 Uzbekistan 13041 A <*> 2 2
16 Uzbekistan 13042 A <*> 2 2
17 Uzbekistan 13043 G <*> 2 2
18 Uzbekistan 13044 T <*> 2 2
19 Uzbekistan 13045 G <*> 2 2
20 Uzbekistan 13046 C <*> 2 2
21 Uzbekistan 13047 C <*> 2 2
22 Uzbekistan 13048 T <*> 2 2
23 Uzbekistan 13049 G <*> 2 2
24 Uzbekistan 13050 C <*> 2 2
25 Uzbekistan 13051 C <*> 2 2
26 Uzbekistan 13052 A <*> 2 2
27 Uzbekistan 13053 A <*> 2 2
28 Uzbekistan 13054 T <*> 2 2
29 Uzbekistan 13055 T <*> 2 2
30 Uzbekistan 13056 C <*> 2 2
31 Uzbekistan 13057 A <*> 2 2
32 Uzbekistan 13058 A <*> 2 2
33 Uzbekistan 13059 C <*> 2 2
34 Uzbekistan 13060 T <*> 2 2
35 Uzbekistan 13061 G <*> 2 2
36 Uzbekistan 13062 T <*> 2 2
37 Uzbekistan 13063 A <*> 2 2
38 Uzbekistan 13064 T <*> 2 2
39 Uzbekistan 13065 T <*> 2 2
40 Uzbekistan 13066 A <*> 2 2
41 Uzbekistan 13067 T <*> 2 2
42 Uzbekistan 13068 C <*> 2 2
43 Uzbekistan 13069 T <*> 2 2
44 Uzbekistan 13070 T <*> 2 2
45 Uzbekistan 13071 T <*> 2 2
46 Uzbekistan 13072 C <*> 2 2
47 Uzbekistan 13073 T <*> 2 2
48 Uzbekistan 13074 G <*> 2 2
49 Uzbekistan 13075 T <*> 2 2
50 Uzbekistan 13076 G <*> 2 2
51 Uzbekistan 13077 C <*> 2 2
52 Uzbekistan 13078 T <*> 2 2
53 Uzbekistan 13079 T <*> 2 2
54 Uzbekistan 13080 T <*> 2 2
55 Uzbekistan 13081 T <*> 2 2
56 Uzbekistan 13082 G <*> 2 2
57 Uzbekistan 13083 C <*> 2 2
58 Uzbekistan 13084 T <*> 2 2
59 Uzbekistan 13085 G <*> 2 2
60 Uzbekistan 13086 T <*> 2 2
61 Uzbekistan 13087 A <*> 2 2
62 Uzbekistan 13088 G <*> 2 2
63 Uzbekistan 13089 A <*> 2 2
64 Uzbekistan 13090 T <*> 2 2
65 Uzbekistan 13091 G <*> 2 2
66 Uzbekistan 13092 C <*> 2 2
67 Uzbekistan 13093 T <*> 2 2
68 Uzbekistan 13094 G <*> 2 2
69 Uzbekistan 13095 C <*> 2 2
70 Uzbekistan 13096 T <*> 2 2
71 Uzbekistan 13097 A <*> 2 2
72 Uzbekistan 13098 A <*> 2 2
73 Uzbekistan 13099 A <*> 2 2
74 Uzbekistan 13100 G <*> 2 2
75 Uzbekistan 13101 C <*> 2 2
76 Uzbekistan 13102 T <*> 2 2
77 Uzbekistan 13103 T <*> 2 2
78 Uzbekistan 13104 A <*> 2 2
79 Uzbekistan 13105 C <*> 2 2
80 Uzbekistan 13106 A <*> 2 2
81 Uzbekistan 13107 A <*> 2 2
82 Uzbekistan 13108 A <*> 2 2
83 Uzbekistan 13109 G <*> 2 2
84 Uzbekistan 13110 A <*> 2 2
85 Uzbekistan 13111 T <*> 2 2
86 Uzbekistan 13112 T <*> 2 2
87 Uzbekistan 13113 A <*> 2 2
88 Uzbekistan 13114 T <*> 2 2
89 Uzbekistan 13115 C <*> 2 2
90 Uzbekistan 13116 T <*> 2 2
91 Uzbekistan 13117 A <*> 2 2
92 Uzbekistan 13118 G <*> 2 2
93 Uzbekistan 13119 C <*> 2 2
94 Uzbekistan 13120 T <*> 2 2
95 Uzbekistan 13121 A <*> 2 2
96 Uzbekistan 13122 G <*> 2 2
97 Uzbekistan 13123 T <*> 2 2
98 Uzbekistan 13124 G <*> 2 2
99 Uzbekistan 13125 G <*> 2 2
100 Uzbekistan 13126 G <*> 2 2
101 Uzbekistan 13127 G <*> 2 2
102 Uzbekistan 13128 G <*> 2 2
103 Uzbekistan 13129 A <*> 2 2
104 Uzbekistan 13130 C <*> 2 2
105 Uzbekistan 13131 A <*> 2 2
106 Uzbekistan 13132 A <*> 2 2
107 Uzbekistan 13133 C <*> 2 2
108 Uzbekistan 13134 C <*> 2 2
109 Uzbekistan 13135 A <*> 2 2
110 Uzbekistan 13136 A <*> 2 2
111 Uzbekistan 13137 T <*> 2 2
112 Uzbekistan 13138 C <*> 2 2
113 Uzbekistan 13139 A <*> 2 2
114 Uzbekistan 13140 C <*> 2 2
115 Uzbekistan 13141 T <*> 2 2
116 Uzbekistan 13142 A <*> 2 2
117 Uzbekistan 13143 A <*> 2 2
118 Uzbekistan 13144 T <*> 2 2
119 Uzbekistan 13145 T <*> 2 2
120 Uzbekistan 13146 G <*> 2 2
121 Uzbekistan 13147 T <*> 2 2
122 Uzbekistan 13148 G <*> 2 2
123 Uzbekistan 13149 T <*> 2 2
124 Uzbekistan 13150 T <*> 2 2
125 Uzbekistan 13151 A <*> 2 2
126 Uzbekistan 13152 A <*> 2 2
127 Uzbekistan 13153 G <*> 2 2
128 Uzbekistan 13154 A <*> 2 2
129 Uzbekistan 13155 T <*> 2 2
130 Uzbekistan 13156 G <*> 2 2
131 Uzbekistan 13157 T <*> 2 2
132 Uzbekistan 13158 T <*> 2 2
133 Uzbekistan 13159 G <*> 2 2
134 Uzbekistan 13160 T <*> 2 2
135 Uzbekistan 13161 G <*> 2 2
136 Uzbekistan 13162 T <*> 2 2
137 Uzbekistan 13163 A <*> 2 2
138 Uzbekistan 13164 C <*> 2 2
139 Uzbekistan 13165 A <*> 2 2
140 Uzbekistan 13166 C <*> 2 2
141 Uzbekistan 13167 A <*> 2 2
142 Uzbekistan 13168 C <*> 2 2
143 Uzbekistan 13169 A <*> 2 2
144 Uzbekistan 13170 C <*> 2 2
145 Uzbekistan 13171 T <*> 2 2
146 Uzbekistan 13172 G <*> 2 2
147 Uzbekistan 13173 G <*> 2 2
148 Uzbekistan 13174 T <*> 2 2
149 Uzbekistan 13175 A <*> 2 2
150 Uzbekistan 13176 C <*> 2 2
151 Uzbekistan 13177 T <*> 2 2
152 Uzbekistan 13178 G <*> 2 2
153 Uzbekistan 13179 G <*> 2 2
154 Uzbekistan 13180 T <*> 2 2
155 Uzbekistan 13181 C <*> 2 2
156 Uzbekistan 13182 A <*> 2 2
157 Uzbekistan 13183 G <*> 2 2
158 Uzbekistan 13184 G <*> 2 2
159 Uzbekistan 13185 C <*> 2 2
160 Uzbekistan 13186 A <*> 2 2
161 Uzbekistan 13187 A <*> 2 2
162 Uzbekistan 13188 T <*> 2 2
163 Uzbekistan 13189 A <*> 2 2
164 Uzbekistan 13190 A <*> 2 2
165 Uzbekistan 13191 C <*> 2 2
166 Uzbekistan 13192 A <*> 2 2
167 Uzbekistan 13193 G <*> 2 2
168 Uzbekistan 13194 T <*> 2 2
169 Uzbekistan 13195 T <*> 2 2
170 Uzbekistan 13196 A <*> 2 2
171 Uzbekistan 13197 C <*> 2 2
172 Uzbekistan 13198 A <*> 2 2
173 Uzbekistan 13199 C <*> 2 2
174 Uzbekistan 13200 C <*> 2 2
175 Uzbekistan 13201 G <*> 2 2
176 Uzbekistan 13202 G <*> 2 2
177 Uzbekistan 13203 A <*> 2 2
178 Uzbekistan 13204 A <*> 2 2
179 Uzbekistan 13205 G <*> 2 2
180 Uzbekistan 13206 C <*> 2 2
181 Uzbekistan 13207 C <*> 2 2
182 Uzbekistan 13208 A <*> 2 2
183 Uzbekistan 13209 A <*> 2 2
184 Uzbekistan 13210 T <*> 2 2
185 Uzbekistan 13211 A <*> 2 2
186 Uzbekistan 13212 T <*> 2 2
187 Uzbekistan 13213 G <*> 2 2
188 Uzbekistan 13214 G <*> 2 2
189 Uzbekistan 13215 A <*> 2 2
190 Uzbekistan 13216 T <*> 2 2
191 Uzbekistan 13217 C <*> 2 2
192 Uzbekistan 13218 A <*> 2 2
193 Uzbekistan 13219 A <*> 2 2
194 Uzbekistan 13220 G <*> 2 2
195 Uzbekistan 13221 A <*> 2 2
196 Uzbekistan 13222 A <*> 2 2
197 Uzbekistan 13223 T <*> 2 2
198 Uzbekistan 13224 C <*> 2 2
199 Uzbekistan 13225 C <*> 2 2
200 Uzbekistan 13226 T <*> 2 2
201 Uzbekistan 13227 T <*> 2 2
202 Uzbekistan 13228 T <*> 2 2
203 Uzbekistan 13229 G <*> 2 2
204 Uzbekistan 13230 G <*> 2 2
205 Uzbekistan 13231 T <*> 2 2
206 Uzbekistan 13232 G <*> 2 2
207 Uzbekistan 13233 G <*> 2 2
208 Uzbekistan 13234 T <*> 2 2
209 Uzbekistan 13235 G <*> 2 2
210 Uzbekistan 13236 C <*> 2 2
211 Uzbekistan 13237 A <*> 2 2
212 Uzbekistan 13238 T <*> 2 2
213 Uzbekistan 13239 C <*> 2 2
214 Uzbekistan 13240 G <*> 2 2
215 Uzbekistan 13241 T <*> 2 2
216 Uzbekistan 13242 G <*> 2 2
217 Uzbekistan 13243 T <*> 2 2
218 Uzbekistan 13244 T <*> 2 2
219 Uzbekistan 13245 G <*> 2 2
220 Uzbekistan 13246 T <*> 2 2
221 Uzbekistan 13247 C <*> 2 2
222 Uzbekistan 13248 T <*> 2 2
223 Uzbekistan 13249 G <*> 2 2
224 Uzbekistan 13250 T <*> 2 2
225 Uzbekistan 13251 A <*> 2 2
226 Uzbekistan 13252 C <*> 2 2
227 Uzbekistan 13253 T <*> 2 2
228 Uzbekistan 13254 G <*> 2 2
229 Uzbekistan 13255 C <*> 2 2
230 Uzbekistan 13256 C <*> 2 2
231 Uzbekistan 13257 G <*> 2 2
232 Uzbekistan 13258 T <*> 2 2
233 Uzbekistan 13259 T <*> 2 2
234 Uzbekistan 13260 G <*> 2 2
235 Uzbekistan 13261 C <*> 2 2
236 Uzbekistan 13262 C <*> 2 2
237 Uzbekistan 13263 A <*> 2 2
238 Uzbekistan 13264 C <*> 2 2
239 Uzbekistan 13265 A <*> 2 2
240 Uzbekistan 13266 T <*> 2 2
241 Uzbekistan 13267 A <*> 2 2
242 Uzbekistan 13268 G <*> 2 2
243 Uzbekistan 13269 A <*> 2 2
244 Uzbekistan 13270 T <*> 2 2
245 Uzbekistan 13271 C <*> 2 2
246 Uzbekistan 13272 A <*> 2 2
247 Uzbekistan 13273 T <*> 2 2
248 Uzbekistan 13274 C <*> 2 2
249 Uzbekistan 13275 C <*> 2 2
250 Uzbekistan 13276 A <*> 2 2
251 Uzbekistan 13277 A <*> 2 2
252 Uzbekistan 13278 A <*> 2 2
253 Uzbekistan 13279 T <*> 2 2
254 Uzbekistan 13280 C <*> 2 2
255 Uzbekistan 13281 C <*> 2 2
256 Uzbekistan 13282 T <*> 2 2
257 Uzbekistan 13283 A <*> 2 2
258 Uzbekistan 13284 A <*> 2 2
259 Uzbekistan 13285 A <*> 2 2
260 Uzbekistan 13286 G <*> 2 2
261 Uzbekistan 13287 G <*> 2 2
262 Uzbekistan 13288 A <*> 2 2
263 Uzbekistan 13289 T <*> 2 2
264 Uzbekistan 13290 T <*> 2 2
265 Uzbekistan 13291 T <*> 2 2
266 Uzbekistan 13292 T <*> 2 2
267 Uzbekistan 13293 G <*> 2 2
268 Uzbekistan 13294 T <*> 2 2
269 Uzbekistan 13295 G <*> 2 2
270 Uzbekistan 13296 A <*> 2 2
271 Uzbekistan 13297 C <*> 2 2
272 Uzbekistan 13298 T <*> 2 2
273 Uzbekistan 13299 T <*> 2 2
274 Uzbekistan 13300 A <*> 2 2
275 Uzbekistan 13301 A <*> 2 2
276 Uzbekistan 13302 A <*> 2 2
277 Uzbekistan 13303 A <*> 2 2
278 Uzbekistan 13304 G <*> 2 2
279 Uzbekistan 13305 G <*> 2 2
280 Uzbekistan 13306 T <*> 2 2
281 Uzbekistan 13307 A <*> 2 2
282 Uzbekistan 13308 A <*> 2 2
283 Uzbekistan 13309 G <*> 2 2
284 Uzbekistan 13310 T <*> 2 2
285 Uzbekistan 13311 A <*> 2 2
286 Uzbekistan 13312 T <*> 2 2
287 Uzbekistan 13313 G <*> 2 2
288 Uzbekistan 13314 T <*> 2 2
289 Uzbekistan 13315 A <*> 2 2
290 Uzbekistan 13316 C <*> 2 2
291 Uzbekistan 13317 A <*> 2 2
292 Uzbekistan 13318 A <*> 2 2
293 Uzbekistan 13319 A <*> 2 2
294 Uzbekistan 13320 T <*> 2 2
295 Uzbekistan 13321 A <*> 2 2
296 Uzbekistan 13322 C <*> 2 2
297 Uzbekistan 13323 C <*> 2 2
298 Uzbekistan 13324 T <*> 2 2
299 Uzbekistan 13325 A <*> 2 2
300 Uzbekistan 13326 C <*> 2 2
301 Uzbekistan 13327 A <*> 2 2
302 Uzbekistan 13328 A <*> 2 2
303 Uzbekistan 13329 C <*> 2 2
304 Uzbekistan 13330 T <*> 2 2
305 Uzbekistan 13331 T <*> 2 2
306 Uzbekistan 13332 G <*> 2 2
307 Uzbekistan 13333 T <*> 2 2
308 Uzbekistan 13334 G <*> 2 2
309 Uzbekistan 13335 C <*> 2 2
310 Uzbekistan 13336 T <*> 2 2
311 Uzbekistan 13337 A <*> 2 2
312 Uzbekistan 13338 A <*> 2 2
313 Uzbekistan 13339 T <*> 2 2
314 Uzbekistan 13340 G <*> 2 2
315 Uzbekistan 13341 A <*> 2 2
316 Uzbekistan 13342 C <*> 2 2
317 Uzbekistan 13343 C <*> 2 2
318 Uzbekistan 13344 C <*> 2 2
319 Uzbekistan 13345 T <*> 2 2
320 Uzbekistan 13346 G <*> 2 2
321 Uzbekistan 13347 T <*> 2 2
322 Uzbekistan 13348 G <*> 2 2
323 Uzbekistan 13349 G <*> 2 2
324 Uzbekistan 13350 G <*> 2 2
325 Uzbekistan 13351 T <*> 2 2
326 Uzbekistan 13352 T <*> 2 2
327 Uzbekistan 13353 T <*> 2 2
328 Uzbekistan 13354 T <*> 2 2
329 Uzbekistan 13355 A <*> 2 2
330 Uzbekistan 13356 C <*> 2 2
331 Uzbekistan 13357 A <*> 2 2
332 Uzbekistan 13358 C <*> 2 2
333 Uzbekistan 13359 T <*> 2 2
334 Uzbekistan 13360 T <*> 2 2
335 Uzbekistan 13361 A <*> 2 2
336 Uzbekistan 13362 A <*> 2 2
337 Uzbekistan 13363 A <*> 2 2
338 Uzbekistan 13364 A <*> 2 2
339 Uzbekistan 13365 A <*> 2 2
340 Uzbekistan 13366 C <*> 2 2
341 Uzbekistan 13367 A <*> 2 2
342 Uzbekistan 13368 C <*> 2 2
343 Uzbekistan 13369 A <*> 2 2
344 Uzbekistan 13370 G <*> 2 2
345 Uzbekistan 13371 T <*> 2 2
346 Uzbekistan 13372 C <*> 2 2
347 Uzbekistan 13373 T <*> 2 2
348 Uzbekistan 13374 G <*> 2 2
349 Uzbekistan 13375 T <*> 2 2
350 Uzbekistan 13376 A <*> 2 2
351 Uzbekistan 13377 C <*> 2 2
352 Uzbekistan 13378 C <*> 2 2
353 Uzbekistan 13379 G <*> 2 2
354 Uzbekistan 13380 T <*> 2 2
355 Uzbekistan 13381 C <*> 2 2
356 Uzbekistan 13382 T <*> 2 2
357 Uzbekistan 13383 G <*> 2 2
358 Uzbekistan 13384 C <*> 2 2
359 Uzbekistan 13385 G <*> 2 2
360 Uzbekistan 13386 G <*> 2 2
361 Uzbekistan 13387 T <*> 2 2
362 Uzbekistan 13388 A <*> 2 2
363 Uzbekistan 13389 T <*> 2 2
364 Uzbekistan 13390 G <*> 2 2
365 Uzbekistan 13391 T <*> 2 2
366 Uzbekistan 13392 G <*> 2 2
367 Uzbekistan 13393 G <*> 2 2
368 Uzbekistan 13394 A <*> 2 2
369 Uzbekistan 13395 A <*> 2 2
370 Uzbekistan 13396 A <*> 2 2
371 Uzbekistan 13397 G <*> 2 2
372 Uzbekistan 13398 G <*> 2 2
373 Uzbekistan 13399 T <*> 2 2
374 Uzbekistan 13400 T <*> 2 2
375 Uzbekistan 13401 A <*> 2 2
376 Uzbekistan 13402 T <*> 2 2
377 Uzbekistan 13403 G <*> 2 2
378 Uzbekistan 13404 G <*> 2 2
379 Uzbekistan 13405 C <*> 2 2
380 Uzbekistan 13406 T <*> 2 2
381 Uzbekistan 13407 G <*> 2 2
382 Uzbekistan 13408 T <*> 2 2
383 Uzbekistan 13409 A <*> 2 2
384 Uzbekistan 13410 G <*> 2 2
385 Uzbekistan 13411 T <*> 2 2
386 Uzbekistan 13412 T <*> 2 2
387 Uzbekistan 13413 G <*> 2 2
388 Uzbekistan 13414 T <*> 2 2
389 Uzbekistan 13415 G <*> 2 2
390 Uzbekistan 13416 A <*> 2 2
391 Uzbekistan 13417 T <*> 2 2
392 Uzbekistan 13418 C <*> 2 2
393 Uzbekistan 13419 A <*> 2 2
394 Uzbekistan 13420 A <*> 2 2
395 Uzbekistan 13421 C <*> 2 2
396 Uzbekistan 13422 T <*> 2 2
397 Uzbekistan 13423 C <*> 2 2
398 Uzbekistan 13424 C <*> 2 2
399 Uzbekistan 13425 G <*> 2 2
400 Uzbekistan 13426 C <*> 2 2
401 Uzbekistan 13427 G <*> 2 2
402 Uzbekistan 13428 A <*> 2 2
403 Uzbekistan 13429 A <*> 2 2
404 Uzbekistan 13430 C <*> 2 2
405 Uzbekistan 13431 C <*> 2 2
406 Uzbekistan 13432 C <*> 2 2
407 Uzbekistan 13433 A <*> 2 2
408 Uzbekistan 13434 T <*> 2 2
409 Uzbekistan 13435 G <*> 2 2
410 Uzbekistan 13436 C <*> 2 2
411 Uzbekistan 13437 T <*> 2 2
412 Uzbekistan 13438 T <*> 2 2
413 Uzbekistan 13439 C <*> 2 2
414 Uzbekistan 13440 A <*> 2 2
415 Uzbekistan 13441 G <*> 2 2