National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   416                                        
?                                            
A   38                                        
C   39                                        
D   21                                        
E   12                                        
F   15                                        
G   39                                        
H   9                                        
I   12                                        
K   24                                        
L   24                                        
M   12                                        
N   21                                        
P   24                         1              
Q   18                                        
R   6                                        
S   18                                        
T   39                                        
V   27                                        
W   3                                        
Y   15                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Taiwan 13026 C 150 150
1 Taiwan 13027 T 150 150
2 Taiwan 13028 G 150 150
3 Taiwan 13029 G 150 150
4 Taiwan 13030 T 150 150
5 Taiwan 13031 A 150 150
6 Taiwan 13032 A 150 150
7 Taiwan 13033 T 150 150
8 Taiwan 13034 G 150 150
9 Taiwan 13035 C 150 150
10 Taiwan 13036 A 150 150
11 Taiwan 13037 A 150 150
12 Taiwan 13038 C 150 150
13 Taiwan 13039 A 150 150
14 Taiwan 13040 G 150 150
15 Taiwan 13041 A 150 150
16 Taiwan 13042 A 150 150
17 Taiwan 13043 G 150 150
18 Taiwan 13044 T 150 150
19 Taiwan 13045 G 150 150
20 Taiwan 13046 C 150 150
21 Taiwan 13047 C 150 150
22 Taiwan 13048 T 150 150
23 Taiwan 13049 G 150 150
24 Taiwan 13050 C 150 150
25 Taiwan 13051 C 150 150
26 Taiwan 13052 A 150 150
27 Taiwan 13053 A 150 150
28 Taiwan 13054 T 150 150
29 Taiwan 13055 T 150 150
30 Taiwan 13056 C 150 150
31 Taiwan 13057 A 150 150
32 Taiwan 13058 A 150 150
33 Taiwan 13059 C 150 150
34 Taiwan 13060 T 150 150
35 Taiwan 13061 G 150 150
36 Taiwan 13062 T 150 150
37 Taiwan 13063 A 150 150
38 Taiwan 13064 T 150 150
39 Taiwan 13065 T 150 150
40 Taiwan 13066 A 150 150
41 Taiwan 13067 T 150 150
42 Taiwan 13068 C 150 150
43 Taiwan 13069 T 150 150
44 Taiwan 13070 T 150 150
45 Taiwan 13071 T 150 150
46 Taiwan 13072 C 150 150
47 Taiwan 13073 T 150 150
48 Taiwan 13074 G 150 150
49 Taiwan 13075 T 150 150
50 Taiwan 13076 G 150 150
51 Taiwan 13077 C 150 150
52 Taiwan 13078 T 150 150
53 Taiwan 13079 T 150 150
54 Taiwan 13080 T 150 150
55 Taiwan 13081 T 150 150
56 Taiwan 13082 G 150 150
57 Taiwan 13083 C 150 150
58 Taiwan 13084 T 150 150
59 Taiwan 13085 G 150 150
60 Taiwan 13086 T 150 150
61 Taiwan 13087 A 150 150
62 Taiwan 13088 G 150 150
63 Taiwan 13089 A 150 150
64 Taiwan 13090 T 150 150
65 Taiwan 13091 G 150 150
66 Taiwan 13092 C 150 150
67 Taiwan 13093 T 150 150
68 Taiwan 13094 G 150 150
69 Taiwan 13095 C 150 150
70 Taiwan 13096 T 150 150
71 Taiwan 13097 A 150 150
72 Taiwan 13098 A 150 150
73 Taiwan 13099 A 150 150
74 Taiwan 13100 G 150 150
75 Taiwan 13101 C 150 150
76 Taiwan 13102 T 150 150
77 Taiwan 13103 T 150 150
78 Taiwan 13104 A 150 150
79 Taiwan 13105 C 150 150
80 Taiwan 13106 A 150 150
81 Taiwan 13107 A 150 150
82 Taiwan 13108 A 150 150
83 Taiwan 13109 G 150 150
84 Taiwan 13110 A 150 150
85 Taiwan 13111 T 150 150
86 Taiwan 13112 T 150 150
87 Taiwan 13113 A 150 150
88 Taiwan 13114 T 150 150
89 Taiwan 13115 C 150 150
90 Taiwan 13116 T 150 150
91 Taiwan 13117 A 150 150
92 Taiwan 13118 G 150 150
93 Taiwan 13119 C 150 150
94 Taiwan 13120 T 150 150
95 Taiwan 13121 A 150 150
96 Taiwan 13122 G 150 150
97 Taiwan 13123 T 150 150
98 Taiwan 13124 G 150 150
99 Taiwan 13125 G 150 150
100 Taiwan 13126 G 150 150
101 Taiwan 13127 G 150 150
102 Taiwan 13128 G 150 150
103 Taiwan 13129 A 150 150
104 Taiwan 13130 C 150 150
105 Taiwan 13131 A 150 150
106 Taiwan 13132 A 150 150
107 Taiwan 13133 C 150 150
108 Taiwan 13134 C 150 150
109 Taiwan 13135 A 150 150
110 Taiwan 13136 A 150 150
111 Taiwan 13137 T 150 150
112 Taiwan 13138 C 150 150
113 Taiwan 13139 A 150 150
114 Taiwan 13140 C 150 150
115 Taiwan 13141 T 150 150
116 Taiwan 13142 A 150 150
117 Taiwan 13143 A 150 150
118 Taiwan 13144 T 150 150
119 Taiwan 13145 T 150 150
120 Taiwan 13146 G 150 150
121 Taiwan 13147 T 150 150
122 Taiwan 13148 G 150 150
123 Taiwan 13149 T 150 150
124 Taiwan 13150 T 150 150
125 Taiwan 13151 A 150 150
126 Taiwan 13152 A 150 150
127 Taiwan 13153 G 150 150
128 Taiwan 13154 A 150 150
129 Taiwan 13155 T 150 150
130 Taiwan 13156 G 150 150
131 Taiwan 13157 T 150 150
132 Taiwan 13158 T 150 150
133 Taiwan 13159 G 150 150
134 Taiwan 13160 T 150 150
135 Taiwan 13161 G 150 150
136 Taiwan 13162 T 150 150
137 Taiwan 13163 A 150 150
138 Taiwan 13164 C 150 150
139 Taiwan 13165 A 150 150
140 Taiwan 13166 C 150 150
141 Taiwan 13167 A 150 150
142 Taiwan 13168 C 150 150
143 Taiwan 13169 A 150 150
144 Taiwan 13170 C 150 150
145 Taiwan 13171 T 150 150
146 Taiwan 13172 G 150 150
147 Taiwan 13173 G 150 150
148 Taiwan 13174 T 150 150
149 Taiwan 13175 A 150 150
150 Taiwan 13176 C 150 150
151 Taiwan 13177 T 150 150
152 Taiwan 13178 G 150 150
153 Taiwan 13179 G 150 150
154 Taiwan 13180 T 150 150
155 Taiwan 13181 C 150 150
156 Taiwan 13182 A 150 150
157 Taiwan 13183 G 150 150
158 Taiwan 13184 G 150 150
159 Taiwan 13185 C 150 150
160 Taiwan 13186 A 150 150
161 Taiwan 13187 A 150 150
162 Taiwan 13188 T 150 150
163 Taiwan 13189 A 150 150
164 Taiwan 13190 A 150 150
165 Taiwan 13191 C 150 150
166 Taiwan 13192 A 150 150
167 Taiwan 13193 G 150 150
168 Taiwan 13194 T 150 150
169 Taiwan 13195 T 150 150
170 Taiwan 13196 A 150 150
171 Taiwan 13197 C 150 150
172 Taiwan 13198 A 150 150
173 Taiwan 13199 C 150 150
174 Taiwan 13200 C 150 150
175 Taiwan 13201 G 150 150
176 Taiwan 13202 G 150 150
177 Taiwan 13203 A 150 150
178 Taiwan 13204 A 150 150
179 Taiwan 13205 G 150 150
180 Taiwan 13206 C 150 150
181 Taiwan 13207 C 150 150
182 Taiwan 13208 A 150 150
183 Taiwan 13209 A 150 150
184 Taiwan 13210 T 150 150
185 Taiwan 13211 A 150 150
186 Taiwan 13212 T 150 150
187 Taiwan 13213 G 150 150
188 Taiwan 13214 G 150 150
189 Taiwan 13215 A 150 150
190 Taiwan 13216 T 150 150
191 Taiwan 13217 C 150 150
192 Taiwan 13218 A 150 150
193 Taiwan 13219 A 150 150
194 Taiwan 13220 G 150 150
195 Taiwan 13221 A 150 150
196 Taiwan 13222 A 150 150
197 Taiwan 13223 T 150 150
198 Taiwan 13224 C 150 150
199 Taiwan 13225 C 150 150
200 Taiwan 13226 T 150 150
201 Taiwan 13227 T 150 150
202 Taiwan 13228 T 150 150
203 Taiwan 13229 G 150 150
204 Taiwan 13230 G 150 150
205 Taiwan 13231 T 150 150
206 Taiwan 13232 G 150 150
207 Taiwan 13233 G 150 150
208 Taiwan 13234 T 150 150
209 Taiwan 13235 G 150 150
210 Taiwan 13236 C 150 150
211 Taiwan 13237 A 150 150
212 Taiwan 13238 T 150 150
213 Taiwan 13239 C 150 150
214 Taiwan 13240 G 150 150
215 Taiwan 13241 T 150 150
216 Taiwan 13242 G 150 150
217 Taiwan 13243 T 150 150
218 Taiwan 13244 T 150 150
219 Taiwan 13245 G 150 150
220 Taiwan 13246 T 150 150
221 Taiwan 13247 C 150 150
222 Taiwan 13248 T 150 150
223 Taiwan 13249 G 150 150
224 Taiwan 13250 T 150 150
225 Taiwan 13251 A 150 150
226 Taiwan 13252 C 150 150
227 Taiwan 13253 T 150 150
228 Taiwan 13254 G 150 150
229 Taiwan 13255 C 150 150
230 Taiwan 13256 C 150 150
231 Taiwan 13257 G 150 150
232 Taiwan 13258 T 150 150
233 Taiwan 13259 T 150 150
234 Taiwan 13260 G 150 150
235 Taiwan 13261 C 150 150
236 Taiwan 13262 C 150 150
237 Taiwan 13263 A 150 150
238 Taiwan 13264 C 150 150
239 Taiwan 13265 A 150 150
240 Taiwan 13266 T 150 150
241 Taiwan 13267 A 150 150
242 Taiwan 13268 G 150 150
243 Taiwan 13269 A 150 150
244 Taiwan 13270 T 150 150
245 Taiwan 13271 C 150 150
246 Taiwan 13272 A 150 150
247 Taiwan 13273 T 150 150
248 Taiwan 13274 C 150 150
249 Taiwan 13275 C 150 150
250 Taiwan 13276 A 150 150
251 Taiwan 13277 A 150 150
252 Taiwan 13278 A 150 150
253 Taiwan 13279 T 150 150
254 Taiwan 13280 C 150 150
255 Taiwan 13281 C 150 150
256 Taiwan 13282 T 150 150
257 Taiwan 13283 A 150 150
258 Taiwan 13284 A 150 150
259 Taiwan 13285 A 150 150
260 Taiwan 13286 G 150 150
261 Taiwan 13287 G 150 150
262 Taiwan 13288 A 150 150
263 Taiwan 13289 T 150 150
264 Taiwan 13290 T 150 150
265 Taiwan 13291 T 150 150
266 Taiwan 13292 T 150 150
267 Taiwan 13293 G 150 150
268 Taiwan 13294 T 150 150
269 Taiwan 13295 G 150 150
270 Taiwan 13296 A 150 150
271 Taiwan 13297 C 150 150
272 Taiwan 13298 T 150 150
273 Taiwan 13299 T 150 150
274 Taiwan 13300 A 150 150
275 Taiwan 13301 A 150 150
276 Taiwan 13302 A 150 150
277 Taiwan 13303 A 150 150
278 Taiwan 13304 G 150 150
279 Taiwan 13305 G 150 150
280 Taiwan 13306 T 150 150
281 Taiwan 13307 A 150 150
282 Taiwan 13308 A 150 150
283 Taiwan 13309 G 150 150
284 Taiwan 13310 T 150 150
285 Taiwan 13311 A 150 150
286 Taiwan 13312 T 150 150
287 Taiwan 13313 G 150 150
288 Taiwan 13314 T 150 150
289 Taiwan 13315 A 150 150
290 Taiwan 13316 C 150 150
291 Taiwan 13317 A 150 150
292 Taiwan 13318 A 150 150
293 Taiwan 13319 A 150 150
294 Taiwan 13320 T 150 150
295 Taiwan 13321 A 150 150
296 Taiwan 13322 C 150 150
297 Taiwan 13323 C 150 150
298 Taiwan 13324 T 150 150
299 Taiwan 13325 A 150 150
300 Taiwan 13326 C 150 150
301 Taiwan 13327 A 150 150
302 Taiwan 13328 A 150 150
303 Taiwan 13329 C 150 150
304 Taiwan 13330 T 150 150
305 Taiwan 13331 T 150 150
306 Taiwan 13332 G 150 150
307 Taiwan 13333 T 150 150
308 Taiwan 13334 G 150 150
309 Taiwan 13335 C 150 150
310 Taiwan 13336 T 150 150
311 Taiwan 13337 A 150 150
312 Taiwan 13338 A 150 150
313 Taiwan 13339 T 150 150
314 Taiwan 13340 G 150 150
315 Taiwan 13341 A 150 150
316 Taiwan 13342 C 150 150
317 Taiwan 13343 C 150 150
318 Taiwan 13344 C 150 150
319 Taiwan 13345 T 150 150
320 Taiwan 13346 G 150 150
321 Taiwan 13347 T 150 150
322 Taiwan 13348 G 150 150
323 Taiwan 13349 G 150 150
324 Taiwan 13350 G 150 150
325 Taiwan 13351 T 150 150
326 Taiwan 13352 T 150 150
327 Taiwan 13353 T 150 150
328 Taiwan 13354 T 150 150
329 Taiwan 13355 A 150 150
330 Taiwan 13356 C 150 150
331 Taiwan 13357 A 150 150
332 Taiwan 13358 C 150 150
333 Taiwan 13359 T 150 150
334 Taiwan 13360 T 150 150
335 Taiwan 13361 A 150 150
336 Taiwan 13362 A 150 150
337 Taiwan 13363 A 150 150
338 Taiwan 13364 A 150 150
339 Taiwan 13365 A 150 150
340 Taiwan 13366 C 150 150
341 Taiwan 13367 A 150 150
342 Taiwan 13368 C 150 150
343 Taiwan 13369 A 150 150
344 Taiwan 13370 G 150 150
345 Taiwan 13371 T 150 150
346 Taiwan 13372 C 150 150
347 Taiwan 13373 T 150 150
348 Taiwan 13374 G 150 150
349 Taiwan 13375 T 150 150
350 Taiwan 13376 A 150 150
351 Taiwan 13377 C 150 150
352 Taiwan 13378 C 150 150
353 Taiwan 13379 G 150 150
354 Taiwan 13380 T 150 150
355 Taiwan 13381 C 150 150
356 Taiwan 13382 T 150 150
357 Taiwan 13383 G 150 150
358 Taiwan 13384 C 150 150
359 Taiwan 13385 G 150 150
360 Taiwan 13386 G 150 150
361 Taiwan 13387 T 150 150
362 Taiwan 13388 A 150 150
363 Taiwan 13389 T 150 150
364 Taiwan 13390 G 150 150
365 Taiwan 13391 T 150 150
366 Taiwan 13392 G 150 150
367 Taiwan 13393 G 150 150
368 Taiwan 13394 A 150 150
369 Taiwan 13395 A 150 150
370 Taiwan 13396 A 150 150
371 Taiwan 13397 G 150 150
372 Taiwan 13398 G 150 150
373 Taiwan 13399 T 150 150
374 Taiwan 13400 T 150 150
375 Taiwan 13401 A 150 150
376 Taiwan 13402 T 150 150
377 Taiwan 13403 G 150 150
378 Taiwan 13404 G 150 150
379 Taiwan 13405 C 150 150
380 Taiwan 13406 T 150 150
381 Taiwan 13407 G 150 150
382 Taiwan 13408 T 150 150
383 Taiwan 13409 A 150 150
384 Taiwan 13410 G 150 150
385 Taiwan 13411 T 150 150
386 Taiwan 13412 T 150 150
387 Taiwan 13413 G 150 150
388 Taiwan 13414 T 150 150
389 Taiwan 13415 G 150 150
390 Taiwan 13416 A 150 150
391 Taiwan 13417 T 150 150
392 Taiwan 13418 C 150 150
393 Taiwan 13419 A 150 150
394 Taiwan 13420 A 150 150
395 Taiwan 13421 C 150 150
396 Taiwan 13422 T 150 150
397 Taiwan 13423 C 150 150
398 Taiwan 13424 C 150 150
399 Taiwan 13425 G 150 150
400 Taiwan 13426 C 150 150
401 Taiwan 13427 G 150 150
402 Taiwan 13428 A 150 150
403 Taiwan 13429 A 150 150
404 Taiwan 13430 C 150 150
405 Taiwan 13431 C 150 150
406 Taiwan 13432 C T 150 149 Pro4389Pro
407 Taiwan 13433 A 150 150
408 Taiwan 13434 T 150 150
409 Taiwan 13435 G 150 150
410 Taiwan 13436 C 150 150
411 Taiwan 13437 T 150 150
412 Taiwan 13438 T 150 150
413 Taiwan 13439 C 150 150
414 Taiwan 13440 A 150 150
415 Taiwan 13441 G 150 150