National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   416                                        
?                                            
A   38 1   1                         1        
C   39   1                                    
D   21     2                                  
E   12                                        
F   15                                        
G   39                                        
H   9                                        
I   12                                        
K   24                                        
L   24         1         1                    
M   12                                        
N   21                                        
P   24                               1        
Q   18                                        
R   6                                        
S   18                                        
T   39               1                        
V   27                                   2    
W   3                                        
Y   15                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 South_Korea 13026 C 1630 1630
1 South_Korea 13027 T 1630 1630
2 South_Korea 13028 G 1630 1630
3 South_Korea 13029 G 1630 1630
4 South_Korea 13030 T 1630 1630
5 South_Korea 13031 A 1630 1630
6 South_Korea 13032 A 1630 1630
7 South_Korea 13033 T 1630 1630
8 South_Korea 13034 G 1630 1630
9 South_Korea 13035 C 1630 1630
10 South_Korea 13036 A 1630 1630
11 South_Korea 13037 A 1630 1630
12 South_Korea 13038 C 1630 1630
13 South_Korea 13039 A 1630 1630
14 South_Korea 13040 G 1630 1630
15 South_Korea 13041 A 1630 1630
16 South_Korea 13042 A 1630 1630
17 South_Korea 13043 G 1630 1630
18 South_Korea 13044 T 1630 1630
19 South_Korea 13045 G 1630 1630
20 South_Korea 13046 C 1630 1630
21 South_Korea 13047 C 1630 1630
22 South_Korea 13048 T 1630 1630
23 South_Korea 13049 G 1630 1630
24 South_Korea 13050 C A 1630 1629 Ala4262Asp
25 South_Korea 13051 C T 1630 1628 Ala4262Ala
26 South_Korea 13052 A 1630 1630
27 South_Korea 13053 A 1630 1630
28 South_Korea 13054 T 1630 1630
29 South_Korea 13055 T 1630 1630
30 South_Korea 13056 C 1630 1630
31 South_Korea 13057 A 1630 1630
32 South_Korea 13058 A 1630 1630
33 South_Korea 13059 C T 1630 1627 Thr4265Ile
34 South_Korea 13060 T 1630 1630
35 South_Korea 13061 G 1630 1630
36 South_Korea 13062 T 1630 1630
37 South_Korea 13063 A 1630 1630
38 South_Korea 13064 T 1630 1630
39 South_Korea 13065 T 1630 1630
40 South_Korea 13066 A 1630 1630
41 South_Korea 13067 T 1630 1630
42 South_Korea 13068 C 1630 1630
43 South_Korea 13069 T 1630 1630
44 South_Korea 13070 T 1630 1630
45 South_Korea 13071 T 1630 1630
46 South_Korea 13072 C 1630 1630
47 South_Korea 13073 T 1630 1630
48 South_Korea 13074 G 1630 1630
49 South_Korea 13075 T 1630 1630
50 South_Korea 13076 G T 1630 1629 Ala4271Ser
51 South_Korea 13077 C 1630 1630
52 South_Korea 13078 T 1630 1630
53 South_Korea 13079 T 1630 1630
54 South_Korea 13080 T 1630 1630
55 South_Korea 13081 T 1630 1630
56 South_Korea 13082 G 1630 1630
57 South_Korea 13083 C 1630 1630
58 South_Korea 13084 T 1630 1630
59 South_Korea 13085 G 1630 1630
60 South_Korea 13086 T 1630 1630
61 South_Korea 13087 A 1630 1630
62 South_Korea 13088 G 1630 1630
63 South_Korea 13089 A 1630 1630
64 South_Korea 13090 T 1630 1630
65 South_Korea 13091 G 1630 1630
66 South_Korea 13092 C 1630 1630
67 South_Korea 13093 T 1630 1630
68 South_Korea 13094 G 1630 1630
69 South_Korea 13095 C 1630 1630
70 South_Korea 13096 T 1630 1630
71 South_Korea 13097 A 1630 1630
72 South_Korea 13098 A 1630 1630
73 South_Korea 13099 A 1630 1630
74 South_Korea 13100 G 1630 1630
75 South_Korea 13101 C 1630 1630
76 South_Korea 13102 T 1630 1630
77 South_Korea 13103 T 1630 1630
78 South_Korea 13104 A 1630 1630
79 South_Korea 13105 C 1630 1630
80 South_Korea 13106 A 1630 1630
81 South_Korea 13107 A 1630 1630
82 South_Korea 13108 A 1630 1630
83 South_Korea 13109 G 1630 1630
84 South_Korea 13110 A 1630 1630
85 South_Korea 13111 T 1630 1630
86 South_Korea 13112 T 1630 1630
87 South_Korea 13113 A 1630 1630
88 South_Korea 13114 T 1630 1630
89 South_Korea 13115 C T 1630 1629 Leu4284Leu
90 South_Korea 13116 T 1630 1630
91 South_Korea 13117 A 1630 1630
92 South_Korea 13118 G 1630 1630
93 South_Korea 13119 C 1630 1630
94 South_Korea 13120 T 1630 1630
95 South_Korea 13121 A 1630 1630
96 South_Korea 13122 G 1630 1630
97 South_Korea 13123 T 1630 1630
98 South_Korea 13124 G 1630 1630
99 South_Korea 13125 G 1630 1630
100 South_Korea 13126 G 1630 1630
101 South_Korea 13127 G 1630 1630
102 South_Korea 13128 G 1630 1630
103 South_Korea 13129 A 1630 1630
104 South_Korea 13130 C 1630 1630
105 South_Korea 13131 A 1630 1630
106 South_Korea 13132 A 1630 1630
107 South_Korea 13133 C 1630 1630
108 South_Korea 13134 C 1630 1630
109 South_Korea 13135 A 1630 1630
110 South_Korea 13136 A 1630 1630
111 South_Korea 13137 T 1630 1630
112 South_Korea 13138 C 1630 1630
113 South_Korea 13139 A 1630 1630
114 South_Korea 13140 C 1630 1630
115 South_Korea 13141 T 1630 1630
116 South_Korea 13142 A 1630 1630
117 South_Korea 13143 A 1630 1630
118 South_Korea 13144 T 1630 1630
119 South_Korea 13145 T 1630 1630
120 South_Korea 13146 G 1630 1630
121 South_Korea 13147 T C 1630 1629 Cys4294Cys
122 South_Korea 13148 G 1630 1630
123 South_Korea 13149 T 1630 1630
124 South_Korea 13150 T 1630 1630
125 South_Korea 13151 A 1630 1630
126 South_Korea 13152 A 1630 1629
127 South_Korea 13153 G 1630 1630
128 South_Korea 13154 A 1630 1630
129 South_Korea 13155 T 1630 1630
130 South_Korea 13156 G 1630 1630
131 South_Korea 13157 T 1630 1630
132 South_Korea 13158 T 1630 1630
133 South_Korea 13159 G 1630 1630
134 South_Korea 13160 T 1630 1630
135 South_Korea 13161 G 1630 1630
136 South_Korea 13162 T 1630 1630
137 South_Korea 13163 A 1630 1630
138 South_Korea 13164 C 1630 1630
139 South_Korea 13165 A 1630 1630
140 South_Korea 13166 C 1630 1630
141 South_Korea 13167 A 1630 1630
142 South_Korea 13168 C 1630 1630
143 South_Korea 13169 A 1630 1630
144 South_Korea 13170 C 1630 1630
145 South_Korea 13171 T 1630 1630
146 South_Korea 13172 G 1630 1630
147 South_Korea 13173 G 1630 1630
148 South_Korea 13174 T 1630 1630
149 South_Korea 13175 A 1630 1630
150 South_Korea 13176 C 1630 1630
151 South_Korea 13177 T 1630 1630
152 South_Korea 13178 G 1630 1630
153 South_Korea 13179 G 1630 1630
154 South_Korea 13180 T 1630 1630
155 South_Korea 13181 C 1630 1630
156 South_Korea 13182 A 1630 1630
157 South_Korea 13183 G 1630 1630
158 South_Korea 13184 G 1630 1630
159 South_Korea 13185 C 1630 1630
160 South_Korea 13186 A 1630 1630
161 South_Korea 13187 A 1630 1630
162 South_Korea 13188 T 1630 1630
163 South_Korea 13189 A 1630 1630
164 South_Korea 13190 A 1630 1630
165 South_Korea 13191 C 1630 1630
166 South_Korea 13192 A 1630 1630
167 South_Korea 13193 G 1630 1630
168 South_Korea 13194 T 1630 1630
169 South_Korea 13195 T 1630 1630
170 South_Korea 13196 A 1630 1630
171 South_Korea 13197 C 1630 1630
172 South_Korea 13198 A 1630 1630
173 South_Korea 13199 C 1630 1630
174 South_Korea 13200 C 1630 1630
175 South_Korea 13201 G 1630 1630
176 South_Korea 13202 G 1630 1630
177 South_Korea 13203 A 1630 1630
178 South_Korea 13204 A 1630 1630
179 South_Korea 13205 G 1630 1630
180 South_Korea 13206 C 1630 1630
181 South_Korea 13207 C 1630 1630
182 South_Korea 13208 A 1630 1630
183 South_Korea 13209 A 1630 1630
184 South_Korea 13210 T 1630 1630
185 South_Korea 13211 A 1630 1630
186 South_Korea 13212 T 1630 1630
187 South_Korea 13213 G 1630 1630
188 South_Korea 13214 G 1630 1630
189 South_Korea 13215 A 1630 1630
190 South_Korea 13216 T C 1630 1629 Asp4317Asp
191 South_Korea 13217 C 1630 1630
192 South_Korea 13218 A 1630 1630
193 South_Korea 13219 A 1630 1630
194 South_Korea 13220 G 1630 1630
195 South_Korea 13221 A 1630 1630
196 South_Korea 13222 A 1630 1630
197 South_Korea 13223 T 1630 1630
198 South_Korea 13224 C 1630 1630
199 South_Korea 13225 C 1630 1630
200 South_Korea 13226 T 1630 1630
201 South_Korea 13227 T 1630 1630
202 South_Korea 13228 T 1630 1630
203 South_Korea 13229 G 1630 1630
204 South_Korea 13230 G 1630 1630
205 South_Korea 13231 T 1630 1630
206 South_Korea 13232 G 1630 1630
207 South_Korea 13233 G 1630 1630
208 South_Korea 13234 T 1630 1630
209 South_Korea 13235 G 1630 1630
210 South_Korea 13236 C 1630 1630
211 South_Korea 13237 A 1630 1630
212 South_Korea 13238 T 1630 1630
213 South_Korea 13239 C 1630 1630
214 South_Korea 13240 G 1630 1630
215 South_Korea 13241 T 1630 1630
216 South_Korea 13242 G 1630 1630
217 South_Korea 13243 T 1630 1630
218 South_Korea 13244 T 1630 1630
219 South_Korea 13245 G 1630 1630
220 South_Korea 13246 T 1630 1630
221 South_Korea 13247 C 1630 1630
222 South_Korea 13248 T 1630 1630
223 South_Korea 13249 G 1630 1630
224 South_Korea 13250 T 1630 1630
225 South_Korea 13251 A 1630 1630
226 South_Korea 13252 C 1630 1630
227 South_Korea 13253 T 1630 1630
228 South_Korea 13254 G 1631 1631
229 South_Korea 13255 C 1631 1631
230 South_Korea 13256 C 1631 1631
231 South_Korea 13257 G 1632 1632
232 South_Korea 13258 T 1632 1632
233 South_Korea 13259 T 1632 1632
234 South_Korea 13260 G 1632 1632
235 South_Korea 13261 C 1632 1632
236 South_Korea 13262 C 1632 1632
237 South_Korea 13263 A 1632 1632
238 South_Korea 13264 C 1632 1632
239 South_Korea 13265 A 1632 1632
240 South_Korea 13266 T 1632 1632
241 South_Korea 13267 A 1632 1632
242 South_Korea 13268 G 1632 1632
243 South_Korea 13269 A 1632 1632
244 South_Korea 13270 T C 1632 1631 Asp4335Asp
245 South_Korea 13271 C 1632 1632
246 South_Korea 13272 A 1632 1632
247 South_Korea 13273 T 1632 1632
248 South_Korea 13274 C 1632 1632
249 South_Korea 13275 C 1632 1632
250 South_Korea 13276 A 1632 1632
251 South_Korea 13277 A 1632 1632
252 South_Korea 13278 A 1632 1632
253 South_Korea 13279 T 1632 1632
254 South_Korea 13280 C 1632 1632
255 South_Korea 13281 C 1632 1632
256 South_Korea 13282 T 1632 1632
257 South_Korea 13283 A 1632 1632
258 South_Korea 13284 A 1632 1632
259 South_Korea 13285 A 1632 1632
260 South_Korea 13286 G 1632 1632
261 South_Korea 13287 G 1632 1632
262 South_Korea 13288 A 1632 1632
263 South_Korea 13289 T 1632 1632
264 South_Korea 13290 T 1632 1632
265 South_Korea 13291 T 1632 1632
266 South_Korea 13292 T 1632 1632
267 South_Korea 13293 G 1632 1632
268 South_Korea 13294 T 1632 1632
269 South_Korea 13295 G 1632 1632
270 South_Korea 13296 A 1632 1632
271 South_Korea 13297 C 1632 1632
272 South_Korea 13298 T 1632 1632
273 South_Korea 13299 T 1632 1632
274 South_Korea 13300 A 1632 1632
275 South_Korea 13301 A 1632 1632
276 South_Korea 13302 A 1632 1632
277 South_Korea 13303 A 1632 1632
278 South_Korea 13304 G 1632 1632
279 South_Korea 13305 G 1632 1632
280 South_Korea 13306 T 1632 1632
281 South_Korea 13307 A 1632 1632
282 South_Korea 13308 A 1632 1632
283 South_Korea 13309 G 1632 1632
284 South_Korea 13310 T 1632 1632
285 South_Korea 13311 A 1632 1632
286 South_Korea 13312 T 1632 1632
287 South_Korea 13313 G 1632 1632
288 South_Korea 13314 T 1632 1632
289 South_Korea 13315 A G 1632 1631 Val4350Val
290 South_Korea 13316 C 1632 1632
291 South_Korea 13317 A 1632 1632
292 South_Korea 13318 A 1632 1632
293 South_Korea 13319 A 1632 1632
294 South_Korea 13320 T 1632 1632
295 South_Korea 13321 A 1632 1632
296 South_Korea 13322 C 1632 1632
297 South_Korea 13323 C 1632 1632
298 South_Korea 13324 T 1632 1632
299 South_Korea 13325 A 1632 1632
300 South_Korea 13326 C 1632 1632
301 South_Korea 13327 A 1632 1632
302 South_Korea 13328 A 1632 1632
303 South_Korea 13329 C 1632 1632
304 South_Korea 13330 T 1632 1632
305 South_Korea 13331 T 1632 1632
306 South_Korea 13332 G 1632 1632
307 South_Korea 13333 T 1632 1632
308 South_Korea 13334 G 1632 1632
309 South_Korea 13335 C 1632 1632
310 South_Korea 13336 T 1631 1631
311 South_Korea 13337 A 1631 1631
312 South_Korea 13338 A 1631 1631
313 South_Korea 13339 T 1631 1631
314 South_Korea 13340 G 1631 1631
315 South_Korea 13341 A 1631 1631
316 South_Korea 13342 C 1631 1631
317 South_Korea 13343 C T 1631 1630 Pro4360Ser
318 South_Korea 13344 C 1631 1631
319 South_Korea 13345 T 1631 1631
320 South_Korea 13346 G 1631 1631
321 South_Korea 13347 T 1631 1631
322 South_Korea 13348 G T 1631 1630 Val4361Val
323 South_Korea 13349 G 1631 1631
324 South_Korea 13350 G 1631 1631
325 South_Korea 13351 T 1631 1631
326 South_Korea 13352 T 1631 1631
327 South_Korea 13353 T 1630 1630
328 South_Korea 13354 T 1630 1630
329 South_Korea 13355 A 1630 1630
330 South_Korea 13356 C 1630 1630
331 South_Korea 13357 A 1630 1630
332 South_Korea 13358 C T 1630 1629 Leu4365Phe
333 South_Korea 13359 T 1630 1630
334 South_Korea 13360 T 1630 1630
335 South_Korea 13361 A 1630 1630
336 South_Korea 13362 A 1630 1630
337 South_Korea 13363 A 1630 1630
338 South_Korea 13364 A 1630 1630
339 South_Korea 13365 A 1630 1630
340 South_Korea 13366 C 1630 1630
341 South_Korea 13367 A 1630 1630
342 South_Korea 13368 C 1630 1630
343 South_Korea 13369 A 1630 1630
344 South_Korea 13370 G 1630 1630
345 South_Korea 13371 T 1630 1630
346 South_Korea 13372 C 1630 1630
347 South_Korea 13373 T 1630 1630
348 South_Korea 13374 G 1630 1630
349 South_Korea 13375 T 1630 1630
350 South_Korea 13376 A 1630 1630
351 South_Korea 13377 C 1630 1630
352 South_Korea 13378 C 1630 1630
353 South_Korea 13379 G 1630 1630
354 South_Korea 13380 T 1630 1630
355 South_Korea 13381 C 1630 1630
356 South_Korea 13382 T 1630 1630
357 South_Korea 13383 G 1630 1630
358 South_Korea 13384 C 1630 1630
359 South_Korea 13385 G 1630 1630
360 South_Korea 13386 G 1630 1630
361 South_Korea 13387 T 1630 1630
362 South_Korea 13388 A 1630 1630
363 South_Korea 13389 T 1630 1630
364 South_Korea 13390 G 1630 1630
365 South_Korea 13391 T 1630 1630
366 South_Korea 13392 G 1630 1630
367 South_Korea 13393 G 1630 1630
368 South_Korea 13394 A 1630 1630
369 South_Korea 13395 A 1630 1630
370 South_Korea 13396 A 1630 1630
371 South_Korea 13397 G 1630 1630
372 South_Korea 13398 G 1630 1630
373 South_Korea 13399 T 1630 1630
374 South_Korea 13400 T 1630 1630
375 South_Korea 13401 A 1630 1630
376 South_Korea 13402 T 1630 1630
377 South_Korea 13403 G 1630 1630
378 South_Korea 13404 G 1630 1630
379 South_Korea 13405 C 1630 1630
380 South_Korea 13406 T 1630 1630
381 South_Korea 13407 G 1630 1630
382 South_Korea 13408 T 1630 1630
383 South_Korea 13409 A 1630 1630
384 South_Korea 13410 G 1630 1630
385 South_Korea 13411 T 1630 1630
386 South_Korea 13412 T 1630 1630
387 South_Korea 13413 G 1630 1630
388 South_Korea 13414 T 1630 1630
389 South_Korea 13415 G 1630 1630
390 South_Korea 13416 A 1630 1630
391 South_Korea 13417 T 1630 1630
392 South_Korea 13418 C 1630 1630
393 South_Korea 13419 A 1630 1630
394 South_Korea 13420 A 1630 1630
395 South_Korea 13421 C 1630 1630
396 South_Korea 13422 T 1629 1629
397 South_Korea 13423 C 1629 1629
398 South_Korea 13424 C 1629 1629
399 South_Korea 13425 G 1629 1629
400 South_Korea 13426 C 1629 1629
401 South_Korea 13427 G 1629 1629
402 South_Korea 13428 A 1629 1629
403 South_Korea 13429 A 1629 1629
404 South_Korea 13430 C 1629 1629
405 South_Korea 13431 C 1629 1629
406 South_Korea 13432 C 1629 1629
407 South_Korea 13433 A 1629 1629
408 South_Korea 13434 T 1629 1629
409 South_Korea 13435 G 1629 1629
410 South_Korea 13436 C 1629 1629
411 South_Korea 13437 T 1629 1629
412 South_Korea 13438 T 1629 1629
413 South_Korea 13439 C 1629 1629
414 South_Korea 13440 A 1629 1629
415 South_Korea 13441 G 1629 1629