National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   416                                        
?                                            
A   38                                        
C   39                                        
D   21                                        
E   12                                        
F   15                                        
G   39                                        
H   9                                        
I   12                                        
K   24                                        
L   24                                        
M   12                                        
N   21                                        
P   24                                        
Q   18                                        
R   6   1                                    
S   18                                        
T   39                                        
V   27                                        
W   3                                        
Y   15                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Serbia 13026 C 147 147
1 Serbia 13027 T 147 147
2 Serbia 13028 G 147 147
3 Serbia 13029 G 147 147
4 Serbia 13030 T 147 147
5 Serbia 13031 A 147 147
6 Serbia 13032 A 147 147
7 Serbia 13033 T 147 147
8 Serbia 13034 G 147 147
9 Serbia 13035 C 147 147
10 Serbia 13036 A 147 147
11 Serbia 13037 A 147 147
12 Serbia 13038 C 147 147
13 Serbia 13039 A 147 147
14 Serbia 13040 G 147 147
15 Serbia 13041 A 147 147
16 Serbia 13042 A 147 147
17 Serbia 13043 G 147 147
18 Serbia 13044 T 147 147
19 Serbia 13045 G 147 147
20 Serbia 13046 C 147 147
21 Serbia 13047 C 147 147
22 Serbia 13048 T 147 147
23 Serbia 13049 G 147 147
24 Serbia 13050 C 147 147
25 Serbia 13051 C 147 147
26 Serbia 13052 A 147 147
27 Serbia 13053 A 147 147
28 Serbia 13054 T 147 147
29 Serbia 13055 T 147 147
30 Serbia 13056 C 147 147
31 Serbia 13057 A 147 147
32 Serbia 13058 A 147 147
33 Serbia 13059 C 147 147
34 Serbia 13060 T 147 147
35 Serbia 13061 G 147 147
36 Serbia 13062 T 147 147
37 Serbia 13063 A 147 147
38 Serbia 13064 T 147 147
39 Serbia 13065 T 147 147
40 Serbia 13066 A 147 147
41 Serbia 13067 T 147 147
42 Serbia 13068 C 147 147
43 Serbia 13069 T 147 147
44 Serbia 13070 T 147 147
45 Serbia 13071 T 147 147
46 Serbia 13072 C 147 147
47 Serbia 13073 T 147 147
48 Serbia 13074 G 147 147
49 Serbia 13075 T 147 147
50 Serbia 13076 G 147 147
51 Serbia 13077 C 147 147
52 Serbia 13078 T 147 147
53 Serbia 13079 T 147 147
54 Serbia 13080 T 147 147
55 Serbia 13081 T 147 147
56 Serbia 13082 G 147 147
57 Serbia 13083 C 147 147
58 Serbia 13084 T 147 147
59 Serbia 13085 G 147 147
60 Serbia 13086 T 147 147
61 Serbia 13087 A 147 147
62 Serbia 13088 G 147 147
63 Serbia 13089 A 147 147
64 Serbia 13090 T 147 147
65 Serbia 13091 G 147 147
66 Serbia 13092 C 147 147
67 Serbia 13093 T 147 147
68 Serbia 13094 G 147 147
69 Serbia 13095 C 147 147
70 Serbia 13096 T 147 147
71 Serbia 13097 A 147 147
72 Serbia 13098 A 147 147
73 Serbia 13099 A 147 147
74 Serbia 13100 G 147 147
75 Serbia 13101 C 147 147
76 Serbia 13102 T 147 147
77 Serbia 13103 T 147 147
78 Serbia 13104 A 147 147
79 Serbia 13105 C 147 147
80 Serbia 13106 A 147 147
81 Serbia 13107 A 147 147
82 Serbia 13108 A 147 147
83 Serbia 13109 G 147 147
84 Serbia 13110 A 147 147
85 Serbia 13111 T 147 147
86 Serbia 13112 T 147 147
87 Serbia 13113 A 147 147
88 Serbia 13114 T 147 147
89 Serbia 13115 C 147 147
90 Serbia 13116 T 147 147
91 Serbia 13117 A 147 147
92 Serbia 13118 G 147 147
93 Serbia 13119 C 147 147
94 Serbia 13120 T 147 147
95 Serbia 13121 A 147 147
96 Serbia 13122 G 147 147
97 Serbia 13123 T 147 147
98 Serbia 13124 G 147 147
99 Serbia 13125 G 147 147
100 Serbia 13126 G 147 147
101 Serbia 13127 G 147 147
102 Serbia 13128 G 147 147
103 Serbia 13129 A 147 147
104 Serbia 13130 C 147 147
105 Serbia 13131 A 147 147
106 Serbia 13132 A 147 147
107 Serbia 13133 C 147 147
108 Serbia 13134 C 147 147
109 Serbia 13135 A 147 147
110 Serbia 13136 A 147 147
111 Serbia 13137 T 147 147
112 Serbia 13138 C 147 147
113 Serbia 13139 A 147 147
114 Serbia 13140 C 147 147
115 Serbia 13141 T 147 147
116 Serbia 13142 A 147 147
117 Serbia 13143 A 147 147
118 Serbia 13144 T 147 147
119 Serbia 13145 T 147 147
120 Serbia 13146 G 147 147
121 Serbia 13147 T 147 147
122 Serbia 13148 G 147 147
123 Serbia 13149 T 147 147
124 Serbia 13150 T 147 147
125 Serbia 13151 A 147 147
126 Serbia 13152 A 147 147
127 Serbia 13153 G 147 147
128 Serbia 13154 A 147 147
129 Serbia 13155 T 147 147
130 Serbia 13156 G 147 147
131 Serbia 13157 T 147 147
132 Serbia 13158 T 147 147
133 Serbia 13159 G 147 147
134 Serbia 13160 T 147 147
135 Serbia 13161 G 147 147
136 Serbia 13162 T 147 147
137 Serbia 13163 A 147 147
138 Serbia 13164 C 147 147
139 Serbia 13165 A 147 147
140 Serbia 13166 C 147 147
141 Serbia 13167 A 147 147
142 Serbia 13168 C 147 147
143 Serbia 13169 A 147 147
144 Serbia 13170 C 147 147
145 Serbia 13171 T 147 147
146 Serbia 13172 G 147 147
147 Serbia 13173 G 147 147
148 Serbia 13174 T 147 147
149 Serbia 13175 A 147 147
150 Serbia 13176 C 147 147
151 Serbia 13177 T 147 147
152 Serbia 13178 G 147 147
153 Serbia 13179 G 147 147
154 Serbia 13180 T 147 147
155 Serbia 13181 C 147 147
156 Serbia 13182 A 147 147
157 Serbia 13183 G 147 147
158 Serbia 13184 G 147 147
159 Serbia 13185 C 147 147
160 Serbia 13186 A 147 147
161 Serbia 13187 A 147 147
162 Serbia 13188 T 147 147
163 Serbia 13189 A 147 147
164 Serbia 13190 A 147 147
165 Serbia 13191 C 147 147
166 Serbia 13192 A 147 147
167 Serbia 13193 G 147 147
168 Serbia 13194 T 147 147
169 Serbia 13195 T 147 147
170 Serbia 13196 A 147 147
171 Serbia 13197 C 147 147
172 Serbia 13198 A 147 147
173 Serbia 13199 C 147 147
174 Serbia 13200 C 147 147
175 Serbia 13201 G 147 147
176 Serbia 13202 G 147 147
177 Serbia 13203 A 147 147
178 Serbia 13204 A 147 147
179 Serbia 13205 G 147 147
180 Serbia 13206 C 147 147
181 Serbia 13207 C 147 147
182 Serbia 13208 A 147 147
183 Serbia 13209 A 147 147
184 Serbia 13210 T 147 147
185 Serbia 13211 A 147 147
186 Serbia 13212 T 147 147
187 Serbia 13213 G 147 147
188 Serbia 13214 G 147 147
189 Serbia 13215 A 147 147
190 Serbia 13216 T 147 147
191 Serbia 13217 C 147 147
192 Serbia 13218 A 147 147
193 Serbia 13219 A 147 147
194 Serbia 13220 G 147 147
195 Serbia 13221 A 147 147
196 Serbia 13222 A 147 147
197 Serbia 13223 T 147 147
198 Serbia 13224 C 147 147
199 Serbia 13225 C 147 147
200 Serbia 13226 T 147 147
201 Serbia 13227 T 147 147
202 Serbia 13228 T 147 147
203 Serbia 13229 G 147 147
204 Serbia 13230 G 147 147
205 Serbia 13231 T 147 147
206 Serbia 13232 G 147 147
207 Serbia 13233 G 147 147
208 Serbia 13234 T 147 147
209 Serbia 13235 G 147 147
210 Serbia 13236 C 147 147
211 Serbia 13237 A 147 147
212 Serbia 13238 T 147 147
213 Serbia 13239 C 147 147
214 Serbia 13240 G 147 147
215 Serbia 13241 T 147 147
216 Serbia 13242 G 147 147
217 Serbia 13243 T 147 147
218 Serbia 13244 T 147 147
219 Serbia 13245 G 147 147
220 Serbia 13246 T 147 147
221 Serbia 13247 C 147 147
222 Serbia 13248 T 147 147
223 Serbia 13249 G 147 147
224 Serbia 13250 T 147 147
225 Serbia 13251 A 147 147
226 Serbia 13252 C 147 147
227 Serbia 13253 T 147 147
228 Serbia 13254 G 147 147
229 Serbia 13255 C 147 147
230 Serbia 13256 C 147 147
231 Serbia 13257 G 147 147
232 Serbia 13258 T 147 147
233 Serbia 13259 T 147 147
234 Serbia 13260 G 147 147
235 Serbia 13261 C 147 147
236 Serbia 13262 C 147 147
237 Serbia 13263 A 147 147
238 Serbia 13264 C 147 147
239 Serbia 13265 A 147 147
240 Serbia 13266 T 147 147
241 Serbia 13267 A 147 147
242 Serbia 13268 G 147 147
243 Serbia 13269 A 147 147
244 Serbia 13270 T 147 147
245 Serbia 13271 C 147 147
246 Serbia 13272 A 147 147
247 Serbia 13273 T 147 147
248 Serbia 13274 C 147 147
249 Serbia 13275 C 147 147
250 Serbia 13276 A 147 147
251 Serbia 13277 A 147 147
252 Serbia 13278 A 147 147
253 Serbia 13279 T 147 147
254 Serbia 13280 C 147 147
255 Serbia 13281 C 147 147
256 Serbia 13282 T 147 147
257 Serbia 13283 A 147 147
258 Serbia 13284 A 147 147
259 Serbia 13285 A 147 147
260 Serbia 13286 G 147 147
261 Serbia 13287 G 147 147
262 Serbia 13288 A 147 147
263 Serbia 13289 T 147 147
264 Serbia 13290 T 147 147
265 Serbia 13291 T 147 147
266 Serbia 13292 T 147 147
267 Serbia 13293 G 147 147
268 Serbia 13294 T 147 147
269 Serbia 13295 G 147 147
270 Serbia 13296 A 147 147
271 Serbia 13297 C 147 147
272 Serbia 13298 T 147 147
273 Serbia 13299 T 147 147
274 Serbia 13300 A 147 147
275 Serbia 13301 A 147 147
276 Serbia 13302 A 147 147
277 Serbia 13303 A 147 147
278 Serbia 13304 G 147 147
279 Serbia 13305 G 147 147
280 Serbia 13306 T 147 147
281 Serbia 13307 A 147 147
282 Serbia 13308 A 147 147
283 Serbia 13309 G 147 147
284 Serbia 13310 T 147 147
285 Serbia 13311 A 147 147
286 Serbia 13312 T 147 147
287 Serbia 13313 G 147 147
288 Serbia 13314 T 147 147
289 Serbia 13315 A 147 147
290 Serbia 13316 C 147 147
291 Serbia 13317 A 147 147
292 Serbia 13318 A 147 147
293 Serbia 13319 A 147 147
294 Serbia 13320 T 147 147
295 Serbia 13321 A 147 147
296 Serbia 13322 C 147 147
297 Serbia 13323 C 147 147
298 Serbia 13324 T 147 147
299 Serbia 13325 A 147 147
300 Serbia 13326 C 147 147
301 Serbia 13327 A 147 147
302 Serbia 13328 A 147 147
303 Serbia 13329 C 147 147
304 Serbia 13330 T 147 147
305 Serbia 13331 T 147 147
306 Serbia 13332 G 147 147
307 Serbia 13333 T 147 147
308 Serbia 13334 G 147 147
309 Serbia 13335 C 147 147
310 Serbia 13336 T 147 147
311 Serbia 13337 A 147 147
312 Serbia 13338 A 147 147
313 Serbia 13339 T 147 147
314 Serbia 13340 G 147 147
315 Serbia 13341 A 147 147
316 Serbia 13342 C 147 147
317 Serbia 13343 C 147 147
318 Serbia 13344 C 147 147
319 Serbia 13345 T 147 147
320 Serbia 13346 G 147 147
321 Serbia 13347 T 147 147
322 Serbia 13348 G 147 147
323 Serbia 13349 G 147 147
324 Serbia 13350 G 147 147
325 Serbia 13351 T 147 147
326 Serbia 13352 T 147 147
327 Serbia 13353 T 147 147
328 Serbia 13354 T 147 147
329 Serbia 13355 A 147 147
330 Serbia 13356 C 147 147
331 Serbia 13357 A 147 147
332 Serbia 13358 C 147 147
333 Serbia 13359 T 147 147
334 Serbia 13360 T 147 147
335 Serbia 13361 A 147 147
336 Serbia 13362 A 147 147
337 Serbia 13363 A 147 147
338 Serbia 13364 A 147 147
339 Serbia 13365 A 147 147
340 Serbia 13366 C 147 147
341 Serbia 13367 A 147 147
342 Serbia 13368 C 147 147
343 Serbia 13369 A 147 147
344 Serbia 13370 G 147 147
345 Serbia 13371 T 147 147
346 Serbia 13372 C 147 147
347 Serbia 13373 T 147 147
348 Serbia 13374 G 147 147
349 Serbia 13375 T 147 147
350 Serbia 13376 A 147 147
351 Serbia 13377 C 147 147
352 Serbia 13378 C 147 147
353 Serbia 13379 G 147 147
354 Serbia 13380 T 147 147
355 Serbia 13381 C 147 147
356 Serbia 13382 T 147 147
357 Serbia 13383 G 147 147
358 Serbia 13384 C 147 147
359 Serbia 13385 G 147 147
360 Serbia 13386 G 147 147
361 Serbia 13387 T 147 147
362 Serbia 13388 A 147 147
363 Serbia 13389 T 147 147
364 Serbia 13390 G 147 147
365 Serbia 13391 T 147 147
366 Serbia 13392 G 147 147
367 Serbia 13393 G 147 147
368 Serbia 13394 A 147 147
369 Serbia 13395 A 147 147
370 Serbia 13396 A 147 147
371 Serbia 13397 G 147 147
372 Serbia 13398 G 147 147
373 Serbia 13399 T 147 147
374 Serbia 13400 T 147 147
375 Serbia 13401 A 147 147
376 Serbia 13402 T 147 147
377 Serbia 13403 G 147 147
378 Serbia 13404 G 147 147
379 Serbia 13405 C 147 147
380 Serbia 13406 T 147 147
381 Serbia 13407 G 147 147
382 Serbia 13408 T 147 147
383 Serbia 13409 A 147 147
384 Serbia 13410 G 147 147
385 Serbia 13411 T 147 147
386 Serbia 13412 T 147 147
387 Serbia 13413 G 147 147
388 Serbia 13414 T 147 147
389 Serbia 13415 G 147 147
390 Serbia 13416 A 147 147
391 Serbia 13417 T 147 147
392 Serbia 13418 C 147 147
393 Serbia 13419 A 147 147
394 Serbia 13420 A 147 147
395 Serbia 13421 C 147 147
396 Serbia 13422 T 147 147
397 Serbia 13423 C 147 147
398 Serbia 13424 C T 147 146 Arg4387Cys
399 Serbia 13425 G 147 147
400 Serbia 13426 C 147 147
401 Serbia 13427 G 147 147
402 Serbia 13428 A 147 147
403 Serbia 13429 A 147 147
404 Serbia 13430 C 147 147
405 Serbia 13431 C 147 147
406 Serbia 13432 C 147 147
407 Serbia 13433 A 147 147
408 Serbia 13434 T 147 147
409 Serbia 13435 G 147 147
410 Serbia 13436 C 147 147
411 Serbia 13437 T 147 147
412 Serbia 13438 T 147 147
413 Serbia 13439 C 147 147
414 Serbia 13440 A 147 147
415 Serbia 13441 G 147 147