National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   416                                        
?                                            
A   38                                        
C   39                                        
D   21                                        
E   12                                        
F   15                                        
G   39                                        
H   9                                        
I   12                                        
K   24                                        
L   24                                        
M   12                                        
N   21                                        
P   24                               1        
Q   18                                        
R   6                                        
S   18                                        
T   39                                        
V   27                                        
W   3                                        
Y   15                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Kazakhstan 13026 C 53 53
1 Kazakhstan 13027 T 53 53
2 Kazakhstan 13028 G 53 53
3 Kazakhstan 13029 G 53 53
4 Kazakhstan 13030 T 53 53
5 Kazakhstan 13031 A 53 53
6 Kazakhstan 13032 A 53 53
7 Kazakhstan 13033 T 53 53
8 Kazakhstan 13034 G 53 53
9 Kazakhstan 13035 C 53 53
10 Kazakhstan 13036 A 53 53
11 Kazakhstan 13037 A 53 53
12 Kazakhstan 13038 C 53 53
13 Kazakhstan 13039 A 53 53
14 Kazakhstan 13040 G 53 53
15 Kazakhstan 13041 A 53 53
16 Kazakhstan 13042 A 53 53
17 Kazakhstan 13043 G 53 53
18 Kazakhstan 13044 T 53 53
19 Kazakhstan 13045 G 53 53
20 Kazakhstan 13046 C T 53 52 Pro4261Ser
21 Kazakhstan 13047 C 53 53
22 Kazakhstan 13048 T 53 53
23 Kazakhstan 13049 G 53 53
24 Kazakhstan 13050 C 53 53
25 Kazakhstan 13051 C 53 53
26 Kazakhstan 13052 A 53 53
27 Kazakhstan 13053 A 53 53
28 Kazakhstan 13054 T 53 53
29 Kazakhstan 13055 T 53 53
30 Kazakhstan 13056 C 53 53
31 Kazakhstan 13057 A 53 53
32 Kazakhstan 13058 A 53 53
33 Kazakhstan 13059 C 53 53
34 Kazakhstan 13060 T 53 53
35 Kazakhstan 13061 G 53 53
36 Kazakhstan 13062 T 53 53
37 Kazakhstan 13063 A 53 53
38 Kazakhstan 13064 T 53 53
39 Kazakhstan 13065 T 53 53
40 Kazakhstan 13066 A 53 53
41 Kazakhstan 13067 T 53 53
42 Kazakhstan 13068 C 53 53
43 Kazakhstan 13069 T 53 53
44 Kazakhstan 13070 T 53 53
45 Kazakhstan 13071 T 53 53
46 Kazakhstan 13072 C 53 53
47 Kazakhstan 13073 T 53 53
48 Kazakhstan 13074 G 53 53
49 Kazakhstan 13075 T 53 53
50 Kazakhstan 13076 G 53 53
51 Kazakhstan 13077 C 53 53
52 Kazakhstan 13078 T 53 53
53 Kazakhstan 13079 T 53 53
54 Kazakhstan 13080 T 53 53
55 Kazakhstan 13081 T 53 53
56 Kazakhstan 13082 G 53 53
57 Kazakhstan 13083 C 53 53
58 Kazakhstan 13084 T 53 53
59 Kazakhstan 13085 G 53 53
60 Kazakhstan 13086 T 53 53
61 Kazakhstan 13087 A 53 53
62 Kazakhstan 13088 G 53 53
63 Kazakhstan 13089 A 53 53
64 Kazakhstan 13090 T 53 53
65 Kazakhstan 13091 G 53 53
66 Kazakhstan 13092 C 53 53
67 Kazakhstan 13093 T 53 53
68 Kazakhstan 13094 G 53 53
69 Kazakhstan 13095 C 53 53
70 Kazakhstan 13096 T 53 53
71 Kazakhstan 13097 A 53 53
72 Kazakhstan 13098 A 53 53
73 Kazakhstan 13099 A 53 53
74 Kazakhstan 13100 G 53 53
75 Kazakhstan 13101 C 53 53
76 Kazakhstan 13102 T 53 53
77 Kazakhstan 13103 T 53 53
78 Kazakhstan 13104 A 53 53
79 Kazakhstan 13105 C 53 53
80 Kazakhstan 13106 A 53 53
81 Kazakhstan 13107 A 53 53
82 Kazakhstan 13108 A 53 53
83 Kazakhstan 13109 G 53 53
84 Kazakhstan 13110 A 53 53
85 Kazakhstan 13111 T 53 53
86 Kazakhstan 13112 T 53 53
87 Kazakhstan 13113 A 53 53
88 Kazakhstan 13114 T 53 53
89 Kazakhstan 13115 C 53 53
90 Kazakhstan 13116 T 53 53
91 Kazakhstan 13117 A 53 53
92 Kazakhstan 13118 G 53 53
93 Kazakhstan 13119 C 53 53
94 Kazakhstan 13120 T 53 53
95 Kazakhstan 13121 A 53 53
96 Kazakhstan 13122 G 53 53
97 Kazakhstan 13123 T 53 53
98 Kazakhstan 13124 G 53 53
99 Kazakhstan 13125 G 53 53
100 Kazakhstan 13126 G 53 53
101 Kazakhstan 13127 G 53 53
102 Kazakhstan 13128 G 53 53
103 Kazakhstan 13129 A 53 53
104 Kazakhstan 13130 C 53 53
105 Kazakhstan 13131 A 53 53
106 Kazakhstan 13132 A 53 53
107 Kazakhstan 13133 C 53 53
108 Kazakhstan 13134 C 53 53
109 Kazakhstan 13135 A 53 53
110 Kazakhstan 13136 A 53 53
111 Kazakhstan 13137 T 53 53
112 Kazakhstan 13138 C 53 53
113 Kazakhstan 13139 A 53 53
114 Kazakhstan 13140 C 53 53
115 Kazakhstan 13141 T 53 53
116 Kazakhstan 13142 A 53 53
117 Kazakhstan 13143 A 53 53
118 Kazakhstan 13144 T 53 53
119 Kazakhstan 13145 T 53 53
120 Kazakhstan 13146 G 53 53
121 Kazakhstan 13147 T 53 53
122 Kazakhstan 13148 G 53 53
123 Kazakhstan 13149 T 53 53
124 Kazakhstan 13150 T 53 53
125 Kazakhstan 13151 A 53 53
126 Kazakhstan 13152 A 53 53
127 Kazakhstan 13153 G 53 53
128 Kazakhstan 13154 A 53 53
129 Kazakhstan 13155 T 53 53
130 Kazakhstan 13156 G 53 53
131 Kazakhstan 13157 T 53 53
132 Kazakhstan 13158 T 53 53
133 Kazakhstan 13159 G 53 53
134 Kazakhstan 13160 T 53 53
135 Kazakhstan 13161 G 53 53
136 Kazakhstan 13162 T 53 53
137 Kazakhstan 13163 A 53 53
138 Kazakhstan 13164 C 53 53
139 Kazakhstan 13165 A 53 53
140 Kazakhstan 13166 C 53 53
141 Kazakhstan 13167 A 53 53
142 Kazakhstan 13168 C 53 53
143 Kazakhstan 13169 A 53 53
144 Kazakhstan 13170 C 53 53
145 Kazakhstan 13171 T 53 53
146 Kazakhstan 13172 G 53 53
147 Kazakhstan 13173 G 53 53
148 Kazakhstan 13174 T 53 53
149 Kazakhstan 13175 A 53 53
150 Kazakhstan 13176 C 53 53
151 Kazakhstan 13177 T 53 53
152 Kazakhstan 13178 G 53 53
153 Kazakhstan 13179 G 53 53
154 Kazakhstan 13180 T 53 53
155 Kazakhstan 13181 C 53 53
156 Kazakhstan 13182 A 53 53
157 Kazakhstan 13183 G 53 53
158 Kazakhstan 13184 G 53 53
159 Kazakhstan 13185 C 53 53
160 Kazakhstan 13186 A 53 53
161 Kazakhstan 13187 A 53 53
162 Kazakhstan 13188 T 53 53
163 Kazakhstan 13189 A 53 53
164 Kazakhstan 13190 A 53 53
165 Kazakhstan 13191 C 53 53
166 Kazakhstan 13192 A 53 53
167 Kazakhstan 13193 G 53 53
168 Kazakhstan 13194 T 53 53
169 Kazakhstan 13195 T 53 53
170 Kazakhstan 13196 A 53 53
171 Kazakhstan 13197 C 53 53
172 Kazakhstan 13198 A 53 53
173 Kazakhstan 13199 C 53 53
174 Kazakhstan 13200 C 53 53
175 Kazakhstan 13201 G 53 53
176 Kazakhstan 13202 G 53 53
177 Kazakhstan 13203 A 53 53
178 Kazakhstan 13204 A 53 53
179 Kazakhstan 13205 G 53 53
180 Kazakhstan 13206 C 53 53
181 Kazakhstan 13207 C 53 53
182 Kazakhstan 13208 A 53 53
183 Kazakhstan 13209 A 53 53
184 Kazakhstan 13210 T 53 53
185 Kazakhstan 13211 A 53 53
186 Kazakhstan 13212 T 53 53
187 Kazakhstan 13213 G 53 53
188 Kazakhstan 13214 G 53 53
189 Kazakhstan 13215 A 53 53
190 Kazakhstan 13216 T 53 53
191 Kazakhstan 13217 C 53 53
192 Kazakhstan 13218 A 53 53
193 Kazakhstan 13219 A 53 53
194 Kazakhstan 13220 G 53 53
195 Kazakhstan 13221 A 53 53
196 Kazakhstan 13222 A 53 53
197 Kazakhstan 13223 T 53 53
198 Kazakhstan 13224 C 53 53
199 Kazakhstan 13225 C 53 53
200 Kazakhstan 13226 T 53 53
201 Kazakhstan 13227 T 53 53
202 Kazakhstan 13228 T 53 53
203 Kazakhstan 13229 G 53 53
204 Kazakhstan 13230 G 53 53
205 Kazakhstan 13231 T 53 53
206 Kazakhstan 13232 G 53 53
207 Kazakhstan 13233 G 53 53
208 Kazakhstan 13234 T 53 53
209 Kazakhstan 13235 G 53 53
210 Kazakhstan 13236 C 53 53
211 Kazakhstan 13237 A 53 53
212 Kazakhstan 13238 T 53 53
213 Kazakhstan 13239 C 53 53
214 Kazakhstan 13240 G 53 53
215 Kazakhstan 13241 T 53 53
216 Kazakhstan 13242 G 53 53
217 Kazakhstan 13243 T 53 53
218 Kazakhstan 13244 T 53 53
219 Kazakhstan 13245 G 53 53
220 Kazakhstan 13246 T 53 53
221 Kazakhstan 13247 C 53 53
222 Kazakhstan 13248 T 53 53
223 Kazakhstan 13249 G 53 53
224 Kazakhstan 13250 T 53 53
225 Kazakhstan 13251 A 53 53
226 Kazakhstan 13252 C 53 53
227 Kazakhstan 13253 T 53 53
228 Kazakhstan 13254 G 53 53
229 Kazakhstan 13255 C 53 53
230 Kazakhstan 13256 C 53 53
231 Kazakhstan 13257 G 53 53
232 Kazakhstan 13258 T 53 53
233 Kazakhstan 13259 T 53 53
234 Kazakhstan 13260 G 53 53
235 Kazakhstan 13261 C 53 53
236 Kazakhstan 13262 C 53 53
237 Kazakhstan 13263 A 53 53
238 Kazakhstan 13264 C 53 53
239 Kazakhstan 13265 A 53 53
240 Kazakhstan 13266 T 53 53
241 Kazakhstan 13267 A 53 53
242 Kazakhstan 13268 G 53 53
243 Kazakhstan 13269 A 53 53
244 Kazakhstan 13270 T 53 53
245 Kazakhstan 13271 C 53 53
246 Kazakhstan 13272 A 53 53
247 Kazakhstan 13273 T 53 53
248 Kazakhstan 13274 C 53 53
249 Kazakhstan 13275 C 53 53
250 Kazakhstan 13276 A 53 53
251 Kazakhstan 13277 A 53 53
252 Kazakhstan 13278 A 53 53
253 Kazakhstan 13279 T 53 53
254 Kazakhstan 13280 C 53 53
255 Kazakhstan 13281 C 53 53
256 Kazakhstan 13282 T 53 53
257 Kazakhstan 13283 A 53 53
258 Kazakhstan 13284 A 53 53
259 Kazakhstan 13285 A 53 53
260 Kazakhstan 13286 G 53 53
261 Kazakhstan 13287 G 53 53
262 Kazakhstan 13288 A 53 53
263 Kazakhstan 13289 T 53 53
264 Kazakhstan 13290 T 53 53
265 Kazakhstan 13291 T 53 53
266 Kazakhstan 13292 T 53 53
267 Kazakhstan 13293 G 53 53
268 Kazakhstan 13294 T 53 53
269 Kazakhstan 13295 G 53 53
270 Kazakhstan 13296 A 53 53
271 Kazakhstan 13297 C 53 53
272 Kazakhstan 13298 T 53 53
273 Kazakhstan 13299 T 53 53
274 Kazakhstan 13300 A 53 53
275 Kazakhstan 13301 A 53 53
276 Kazakhstan 13302 A 53 53
277 Kazakhstan 13303 A 53 53
278 Kazakhstan 13304 G 53 53
279 Kazakhstan 13305 G 53 53
280 Kazakhstan 13306 T 53 53
281 Kazakhstan 13307 A 53 53
282 Kazakhstan 13308 A 53 53
283 Kazakhstan 13309 G 53 53
284 Kazakhstan 13310 T 53 53
285 Kazakhstan 13311 A 53 53
286 Kazakhstan 13312 T 53 53
287 Kazakhstan 13313 G 53 53
288 Kazakhstan 13314 T 53 53
289 Kazakhstan 13315 A 53 53
290 Kazakhstan 13316 C 53 53
291 Kazakhstan 13317 A 53 53
292 Kazakhstan 13318 A 53 53
293 Kazakhstan 13319 A 53 53
294 Kazakhstan 13320 T 53 53
295 Kazakhstan 13321 A 53 53
296 Kazakhstan 13322 C 53 53
297 Kazakhstan 13323 C 53 53
298 Kazakhstan 13324 T 53 53
299 Kazakhstan 13325 A 53 53
300 Kazakhstan 13326 C 53 53
301 Kazakhstan 13327 A 53 53
302 Kazakhstan 13328 A 53 53
303 Kazakhstan 13329 C 53 53
304 Kazakhstan 13330 T 53 53
305 Kazakhstan 13331 T 53 53
306 Kazakhstan 13332 G 53 53
307 Kazakhstan 13333 T 53 53
308 Kazakhstan 13334 G 53 53
309 Kazakhstan 13335 C 53 53
310 Kazakhstan 13336 T 53 53
311 Kazakhstan 13337 A 53 53
312 Kazakhstan 13338 A 53 53
313 Kazakhstan 13339 T 53 53
314 Kazakhstan 13340 G 53 53
315 Kazakhstan 13341 A 53 53
316 Kazakhstan 13342 C 53 53
317 Kazakhstan 13343 C 53 53
318 Kazakhstan 13344 C 53 53
319 Kazakhstan 13345 T 53 53
320 Kazakhstan 13346 G 53 53
321 Kazakhstan 13347 T 53 53
322 Kazakhstan 13348 G 53 53
323 Kazakhstan 13349 G 53 53
324 Kazakhstan 13350 G 53 53
325 Kazakhstan 13351 T 53 53
326 Kazakhstan 13352 T 53 53
327 Kazakhstan 13353 T 53 53
328 Kazakhstan 13354 T 53 53
329 Kazakhstan 13355 A 53 53
330 Kazakhstan 13356 C 53 53
331 Kazakhstan 13357 A 53 53
332 Kazakhstan 13358 C 53 53
333 Kazakhstan 13359 T 53 53
334 Kazakhstan 13360 T 53 53
335 Kazakhstan 13361 A 53 53
336 Kazakhstan 13362 A 53 53
337 Kazakhstan 13363 A 53 53
338 Kazakhstan 13364 A 53 53
339 Kazakhstan 13365 A 53 53
340 Kazakhstan 13366 C 53 53
341 Kazakhstan 13367 A 53 53
342 Kazakhstan 13368 C 53 53
343 Kazakhstan 13369 A 53 53
344 Kazakhstan 13370 G 53 53
345 Kazakhstan 13371 T 53 53
346 Kazakhstan 13372 C 53 53
347 Kazakhstan 13373 T 53 53
348 Kazakhstan 13374 G 53 53
349 Kazakhstan 13375 T 53 53
350 Kazakhstan 13376 A 53 53
351 Kazakhstan 13377 C 53 53
352 Kazakhstan 13378 C 53 53
353 Kazakhstan 13379 G 53 53
354 Kazakhstan 13380 T 53 53
355 Kazakhstan 13381 C 53 53
356 Kazakhstan 13382 T 53 53
357 Kazakhstan 13383 G 53 53
358 Kazakhstan 13384 C 53 53
359 Kazakhstan 13385 G 53 53
360 Kazakhstan 13386 G 53 53
361 Kazakhstan 13387 T 53 53
362 Kazakhstan 13388 A 53 53
363 Kazakhstan 13389 T 53 53
364 Kazakhstan 13390 G 53 53
365 Kazakhstan 13391 T 53 53
366 Kazakhstan 13392 G 53 53
367 Kazakhstan 13393 G 53 53
368 Kazakhstan 13394 A 53 53
369 Kazakhstan 13395 A 53 53
370 Kazakhstan 13396 A 53 53
371 Kazakhstan 13397 G 53 53
372 Kazakhstan 13398 G 53 53
373 Kazakhstan 13399 T 53 53
374 Kazakhstan 13400 T 53 53
375 Kazakhstan 13401 A 53 53
376 Kazakhstan 13402 T 53 53
377 Kazakhstan 13403 G 53 53
378 Kazakhstan 13404 G 53 53
379 Kazakhstan 13405 C 53 53
380 Kazakhstan 13406 T 53 53
381 Kazakhstan 13407 G 53 53
382 Kazakhstan 13408 T 53 53
383 Kazakhstan 13409 A 53 53
384 Kazakhstan 13410 G 53 53
385 Kazakhstan 13411 T 53 53
386 Kazakhstan 13412 T 53 53
387 Kazakhstan 13413 G 53 53
388 Kazakhstan 13414 T 53 53
389 Kazakhstan 13415 G 53 53
390 Kazakhstan 13416 A 53 53
391 Kazakhstan 13417 T 53 53
392 Kazakhstan 13418 C 53 53
393 Kazakhstan 13419 A 53 53
394 Kazakhstan 13420 A 53 53
395 Kazakhstan 13421 C 53 53
396 Kazakhstan 13422 T 53 53
397 Kazakhstan 13423 C 53 53
398 Kazakhstan 13424 C 53 53
399 Kazakhstan 13425 G 53 53
400 Kazakhstan 13426 C 53 53
401 Kazakhstan 13427 G 53 53
402 Kazakhstan 13428 A 53 53
403 Kazakhstan 13429 A 53 53
404 Kazakhstan 13430 C 53 53
405 Kazakhstan 13431 C 53 53
406 Kazakhstan 13432 C 53 53
407 Kazakhstan 13433 A 53 53
408 Kazakhstan 13434 T 53 53
409 Kazakhstan 13435 G 53 53
410 Kazakhstan 13436 C 53 53
411 Kazakhstan 13437 T 53 53
412 Kazakhstan 13438 T 53 53
413 Kazakhstan 13439 C 53 53
414 Kazakhstan 13440 A 53 53
415 Kazakhstan 13441 G 53 53