National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   416                                        
?                                            
A   38                                        
C   39                                        
D   21                                        
E   12                                        
F   15                                        
G   39                                        
H   9                                        
I   12                                        
K   24                                        
L   24                                        
M   12                                        
N   21                                        
P   24                                        
Q   18                                        
R   6                                        
S   18                                        
T   39                                        
V   27                                        
W   3                                        
Y   15                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Iraq 13026 C 31 31
1 Iraq 13027 T 31 31
2 Iraq 13028 G 31 31
3 Iraq 13029 G 31 31
4 Iraq 13030 T 31 31
5 Iraq 13031 A 31 31
6 Iraq 13032 A 31 31
7 Iraq 13033 T 31 31
8 Iraq 13034 G 31 31
9 Iraq 13035 C 31 31
10 Iraq 13036 A 31 31
11 Iraq 13037 A 31 31
12 Iraq 13038 C 31 31
13 Iraq 13039 A 31 31
14 Iraq 13040 G 31 31
15 Iraq 13041 A 31 31
16 Iraq 13042 A 31 31
17 Iraq 13043 G 31 31
18 Iraq 13044 T 31 31
19 Iraq 13045 G 31 31
20 Iraq 13046 C 31 31
21 Iraq 13047 C 31 31
22 Iraq 13048 T 31 31
23 Iraq 13049 G 31 31
24 Iraq 13050 C 31 31
25 Iraq 13051 C 31 31
26 Iraq 13052 A 31 31
27 Iraq 13053 A 31 31
28 Iraq 13054 T 31 31
29 Iraq 13055 T 31 31
30 Iraq 13056 C 31 31
31 Iraq 13057 A 31 31
32 Iraq 13058 A 31 31
33 Iraq 13059 C 31 31
34 Iraq 13060 T 31 31
35 Iraq 13061 G 31 31
36 Iraq 13062 T 31 31
37 Iraq 13063 A 31 31
38 Iraq 13064 T 31 31
39 Iraq 13065 T 31 31
40 Iraq 13066 A 31 31
41 Iraq 13067 T 31 31
42 Iraq 13068 C 31 31
43 Iraq 13069 T 31 31
44 Iraq 13070 T 31 31
45 Iraq 13071 T 31 31
46 Iraq 13072 C 31 31
47 Iraq 13073 T 31 31
48 Iraq 13074 G 31 31
49 Iraq 13075 T 31 31
50 Iraq 13076 G 31 31
51 Iraq 13077 C 31 31
52 Iraq 13078 T 31 31
53 Iraq 13079 T 31 31
54 Iraq 13080 T 31 31
55 Iraq 13081 T 31 31
56 Iraq 13082 G 31 31
57 Iraq 13083 C 31 31
58 Iraq 13084 T 31 31
59 Iraq 13085 G 31 31
60 Iraq 13086 T 31 31
61 Iraq 13087 A 31 31
62 Iraq 13088 G 31 31
63 Iraq 13089 A 31 31
64 Iraq 13090 T 31 31
65 Iraq 13091 G 31 31
66 Iraq 13092 C 31 31
67 Iraq 13093 T 31 31
68 Iraq 13094 G 31 31
69 Iraq 13095 C 31 31
70 Iraq 13096 T 31 31
71 Iraq 13097 A 31 31
72 Iraq 13098 A 31 31
73 Iraq 13099 A 31 31
74 Iraq 13100 G 31 31
75 Iraq 13101 C 31 31
76 Iraq 13102 T 31 31
77 Iraq 13103 T 31 31
78 Iraq 13104 A 31 31
79 Iraq 13105 C 31 31
80 Iraq 13106 A 31 31
81 Iraq 13107 A 31 31
82 Iraq 13108 A 31 31
83 Iraq 13109 G 31 31
84 Iraq 13110 A 31 31
85 Iraq 13111 T 31 31
86 Iraq 13112 T 31 31
87 Iraq 13113 A 31 31
88 Iraq 13114 T 31 31
89 Iraq 13115 C 31 31
90 Iraq 13116 T 31 31
91 Iraq 13117 A 31 31
92 Iraq 13118 G 31 31
93 Iraq 13119 C 31 31
94 Iraq 13120 T 31 31
95 Iraq 13121 A 31 31
96 Iraq 13122 G 31 31
97 Iraq 13123 T 31 31
98 Iraq 13124 G 31 31
99 Iraq 13125 G 31 31
100 Iraq 13126 G 31 31
101 Iraq 13127 G 31 31
102 Iraq 13128 G 31 31
103 Iraq 13129 A 31 31
104 Iraq 13130 C 31 31
105 Iraq 13131 A 31 31
106 Iraq 13132 A 31 31
107 Iraq 13133 C 31 31
108 Iraq 13134 C 31 31
109 Iraq 13135 A 31 31
110 Iraq 13136 A 31 31
111 Iraq 13137 T 31 31
112 Iraq 13138 C 31 31
113 Iraq 13139 A 31 31
114 Iraq 13140 C 31 31
115 Iraq 13141 T 31 31
116 Iraq 13142 A 31 31
117 Iraq 13143 A 31 31
118 Iraq 13144 T 31 31
119 Iraq 13145 T 31 31
120 Iraq 13146 G 31 31
121 Iraq 13147 T 31 31
122 Iraq 13148 G 31 31
123 Iraq 13149 T 31 31
124 Iraq 13150 T 31 31
125 Iraq 13151 A 31 31
126 Iraq 13152 A 31 31
127 Iraq 13153 G 31 31
128 Iraq 13154 A 31 31
129 Iraq 13155 T 31 31
130 Iraq 13156 G 31 31
131 Iraq 13157 T 31 31
132 Iraq 13158 T 31 31
133 Iraq 13159 G 31 31
134 Iraq 13160 T 31 31
135 Iraq 13161 G 31 31
136 Iraq 13162 T 31 31
137 Iraq 13163 A 31 31
138 Iraq 13164 C 31 31
139 Iraq 13165 A 31 31
140 Iraq 13166 C 31 31
141 Iraq 13167 A 31 31
142 Iraq 13168 C 31 31
143 Iraq 13169 A 31 31
144 Iraq 13170 C 31 31
145 Iraq 13171 T 31 31
146 Iraq 13172 G 31 31
147 Iraq 13173 G 31 31
148 Iraq 13174 T 31 31
149 Iraq 13175 A 31 31
150 Iraq 13176 C 31 31
151 Iraq 13177 T 31 31
152 Iraq 13178 G 31 31
153 Iraq 13179 G 31 31
154 Iraq 13180 T 31 31
155 Iraq 13181 C 31 31
156 Iraq 13182 A 31 31
157 Iraq 13183 G 31 31
158 Iraq 13184 G 31 31
159 Iraq 13185 C 31 31
160 Iraq 13186 A 31 31
161 Iraq 13187 A 31 31
162 Iraq 13188 T 31 31
163 Iraq 13189 A 31 31
164 Iraq 13190 A 31 31
165 Iraq 13191 C 31 31
166 Iraq 13192 A 31 31
167 Iraq 13193 G 31 31
168 Iraq 13194 T 31 31
169 Iraq 13195 T 31 31
170 Iraq 13196 A 31 31
171 Iraq 13197 C 31 31
172 Iraq 13198 A 31 31
173 Iraq 13199 C 31 31
174 Iraq 13200 C 31 31
175 Iraq 13201 G 31 31
176 Iraq 13202 G 31 31
177 Iraq 13203 A 31 31
178 Iraq 13204 A 31 31
179 Iraq 13205 G 31 31
180 Iraq 13206 C 31 31
181 Iraq 13207 C 31 31
182 Iraq 13208 A 31 31
183 Iraq 13209 A 31 31
184 Iraq 13210 T 31 31
185 Iraq 13211 A 31 31
186 Iraq 13212 T 31 31
187 Iraq 13213 G 31 31
188 Iraq 13214 G 31 31
189 Iraq 13215 A 31 31
190 Iraq 13216 T 31 31
191 Iraq 13217 C 31 31
192 Iraq 13218 A 31 31
193 Iraq 13219 A 31 31
194 Iraq 13220 G 31 31
195 Iraq 13221 A 31 31
196 Iraq 13222 A 31 31
197 Iraq 13223 T 31 31
198 Iraq 13224 C 31 31
199 Iraq 13225 C 31 31
200 Iraq 13226 T 31 31
201 Iraq 13227 T 31 31
202 Iraq 13228 T 31 31
203 Iraq 13229 G 31 31
204 Iraq 13230 G 31 31
205 Iraq 13231 T 31 31
206 Iraq 13232 G 31 31
207 Iraq 13233 G 31 31
208 Iraq 13234 T 31 31
209 Iraq 13235 G 31 31
210 Iraq 13236 C 31 31
211 Iraq 13237 A 31 31
212 Iraq 13238 T 31 31
213 Iraq 13239 C 31 31
214 Iraq 13240 G 31 31
215 Iraq 13241 T 31 31
216 Iraq 13242 G 31 31
217 Iraq 13243 T 31 31
218 Iraq 13244 T 31 31
219 Iraq 13245 G 31 31
220 Iraq 13246 T 31 31
221 Iraq 13247 C 31 31
222 Iraq 13248 T 31 31
223 Iraq 13249 G 31 31
224 Iraq 13250 T 31 31
225 Iraq 13251 A 31 31
226 Iraq 13252 C 31 31
227 Iraq 13253 T 31 31
228 Iraq 13254 G 31 31
229 Iraq 13255 C 31 31
230 Iraq 13256 C 31 31
231 Iraq 13257 G 31 31
232 Iraq 13258 T 31 31
233 Iraq 13259 T 31 31
234 Iraq 13260 G 31 31
235 Iraq 13261 C 31 31
236 Iraq 13262 C 31 31
237 Iraq 13263 A 31 31
238 Iraq 13264 C 31 31
239 Iraq 13265 A 31 31
240 Iraq 13266 T 31 31
241 Iraq 13267 A 31 31
242 Iraq 13268 G 31 31
243 Iraq 13269 A 31 31
244 Iraq 13270 T 31 31
245 Iraq 13271 C 31 31
246 Iraq 13272 A 31 31
247 Iraq 13273 T 31 31
248 Iraq 13274 C 31 31
249 Iraq 13275 C 31 31
250 Iraq 13276 A 31 31
251 Iraq 13277 A 31 31
252 Iraq 13278 A 31 31
253 Iraq 13279 T 31 31
254 Iraq 13280 C 31 31
255 Iraq 13281 C 31 31
256 Iraq 13282 T 31 31
257 Iraq 13283 A 31 31
258 Iraq 13284 A 31 31
259 Iraq 13285 A 31 31
260 Iraq 13286 G 31 31
261 Iraq 13287 G 31 31
262 Iraq 13288 A 31 31
263 Iraq 13289 T 31 31
264 Iraq 13290 T 31 31
265 Iraq 13291 T 31 31
266 Iraq 13292 T 31 31
267 Iraq 13293 G 31 31
268 Iraq 13294 T 31 31
269 Iraq 13295 G 31 31
270 Iraq 13296 A 31 31
271 Iraq 13297 C 31 31
272 Iraq 13298 T 31 31
273 Iraq 13299 T 31 31
274 Iraq 13300 A 31 31
275 Iraq 13301 A 31 31
276 Iraq 13302 A 31 31
277 Iraq 13303 A 31 31
278 Iraq 13304 G 31 31
279 Iraq 13305 G 31 31
280 Iraq 13306 T 31 31
281 Iraq 13307 A 31 31
282 Iraq 13308 A 31 31
283 Iraq 13309 G 31 31
284 Iraq 13310 T 31 31
285 Iraq 13311 A 31 31
286 Iraq 13312 T 31 31
287 Iraq 13313 G 31 31
288 Iraq 13314 T 31 31
289 Iraq 13315 A 31 31
290 Iraq 13316 C 31 31
291 Iraq 13317 A 31 31
292 Iraq 13318 A 31 31
293 Iraq 13319 A 31 31
294 Iraq 13320 T 31 31
295 Iraq 13321 A 31 31
296 Iraq 13322 C 31 31
297 Iraq 13323 C 31 31
298 Iraq 13324 T 31 31
299 Iraq 13325 A 31 31
300 Iraq 13326 C 31 31
301 Iraq 13327 A 31 31
302 Iraq 13328 A 31 31
303 Iraq 13329 C 31 31
304 Iraq 13330 T 31 31
305 Iraq 13331 T 31 31
306 Iraq 13332 G 31 31
307 Iraq 13333 T 31 31
308 Iraq 13334 G 31 31
309 Iraq 13335 C 31 31
310 Iraq 13336 T 31 31
311 Iraq 13337 A 31 31
312 Iraq 13338 A 31 31
313 Iraq 13339 T 31 31
314 Iraq 13340 G 31 31
315 Iraq 13341 A 31 31
316 Iraq 13342 C 31 31
317 Iraq 13343 C 31 31
318 Iraq 13344 C 31 31
319 Iraq 13345 T 31 31
320 Iraq 13346 G 31 31
321 Iraq 13347 T 31 31
322 Iraq 13348 G 31 31
323 Iraq 13349 G 31 31
324 Iraq 13350 G 31 31
325 Iraq 13351 T 31 31
326 Iraq 13352 T 31 31
327 Iraq 13353 T 31 31
328 Iraq 13354 T 31 31
329 Iraq 13355 A 31 31
330 Iraq 13356 C 31 31
331 Iraq 13357 A 31 31
332 Iraq 13358 C 31 31
333 Iraq 13359 T 31 31
334 Iraq 13360 T 31 31
335 Iraq 13361 A 31 31
336 Iraq 13362 A 31 31
337 Iraq 13363 A 31 31
338 Iraq 13364 A 31 31
339 Iraq 13365 A 31 31
340 Iraq 13366 C 31 31
341 Iraq 13367 A 31 31
342 Iraq 13368 C 31 31
343 Iraq 13369 A 31 31
344 Iraq 13370 G 31 31
345 Iraq 13371 T 31 31
346 Iraq 13372 C 31 31
347 Iraq 13373 T 31 31
348 Iraq 13374 G 31 31
349 Iraq 13375 T 31 31
350 Iraq 13376 A 31 31
351 Iraq 13377 C 31 31
352 Iraq 13378 C 31 31
353 Iraq 13379 G 31 31
354 Iraq 13380 T 31 31
355 Iraq 13381 C 31 31
356 Iraq 13382 T 31 31
357 Iraq 13383 G 31 31
358 Iraq 13384 C 31 31
359 Iraq 13385 G 31 31
360 Iraq 13386 G 31 31
361 Iraq 13387 T 31 31
362 Iraq 13388 A 31 31
363 Iraq 13389 T 31 31
364 Iraq 13390 G 31 31
365 Iraq 13391 T 31 31
366 Iraq 13392 G 31 31
367 Iraq 13393 G 31 31
368 Iraq 13394 A 31 31
369 Iraq 13395 A 31 31
370 Iraq 13396 A 31 31
371 Iraq 13397 G 31 31
372 Iraq 13398 G 31 31
373 Iraq 13399 T 31 31
374 Iraq 13400 T 31 31
375 Iraq 13401 A 31 31
376 Iraq 13402 T 31 31
377 Iraq 13403 G 31 31
378 Iraq 13404 G 31 31
379 Iraq 13405 C 31 31
380 Iraq 13406 T 31 31
381 Iraq 13407 G 31 31
382 Iraq 13408 T 31 31
383 Iraq 13409 A 31 31
384 Iraq 13410 G 31 31
385 Iraq 13411 T 31 31
386 Iraq 13412 T 31 31
387 Iraq 13413 G 31 31
388 Iraq 13414 T 31 31
389 Iraq 13415 G 31 31
390 Iraq 13416 A 31 31
391 Iraq 13417 T 31 31
392 Iraq 13418 C 31 31
393 Iraq 13419 A 31 31
394 Iraq 13420 A 31 31
395 Iraq 13421 C 31 31
396 Iraq 13422 T 31 31
397 Iraq 13423 C 31 31
398 Iraq 13424 C 31 31
399 Iraq 13425 G 31 31
400 Iraq 13426 C 31 31
401 Iraq 13427 G 31 31
402 Iraq 13428 A 31 31
403 Iraq 13429 A 31 31
404 Iraq 13430 C 31 31
405 Iraq 13431 C 31 31
406 Iraq 13432 C 31 31
407 Iraq 13433 A 31 31
408 Iraq 13434 T 31 31
409 Iraq 13435 G 31 31
410 Iraq 13436 C 31 31
411 Iraq 13437 T 31 31
412 Iraq 13438 T 31 31
413 Iraq 13439 C 31 31
414 Iraq 13440 A 31 31
415 Iraq 13441 G 31 31