National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   416                                        
?                                            
A   38 1                                 1    
C   39   2                                    
D   21 1     1               1                
E   12                                        
F   15                                        
G   39                                        
H   9                           1            
I   12                                        
K   24                 1                      
L   24                   2       1            
M   12                                        
N   21                                        
P   24 1                 1           2        
Q   18                                        
R   6                             1          
S   18                               1        
T   39               2       1                
V   27 1                                 3    
W   3                                        
Y   15                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Iceland 13026 C 4137 4137
1 Iceland 13027 T 4137 4137
2 Iceland 13028 G 4146 4146
3 Iceland 13029 G 4146 4146
4 Iceland 13030 T 4146 4146
5 Iceland 13031 A 4146 4146
6 Iceland 13032 A 4146 4146
7 Iceland 13033 T 4146 4146
8 Iceland 13034 G 4146 4146
9 Iceland 13035 C 4146 4146
10 Iceland 13036 A 4146 4146
11 Iceland 13037 A 4146 4146
12 Iceland 13038 C 4146 4146
13 Iceland 13039 A 4146 4146
14 Iceland 13040 G 4146 4146
15 Iceland 13041 A 4146 4146
16 Iceland 13042 A 4146 4146
17 Iceland 13043 G 4146 4146
18 Iceland 13044 T C 4146 4145 Val4260Ala
19 Iceland 13045 G 4146 4146
20 Iceland 13046 C T 4146 4145 Pro4261Ser
21 Iceland 13047 C 4146 4146
22 Iceland 13048 T 4146 4146
23 Iceland 13049 G 4146 4146
24 Iceland 13050 C 4146 4146
25 Iceland 13051 C T 4146 4144 Ala4262Ala
26 Iceland 13052 A 4146 4146
27 Iceland 13053 A 4146 4146
28 Iceland 13054 T 4146 4146
29 Iceland 13055 T 4146 4146
30 Iceland 13056 C 4146 4146
31 Iceland 13057 A 4146 4146
32 Iceland 13058 A 4146 4146
33 Iceland 13059 C T 4146 4144 Thr4265Ile
34 Iceland 13060 T 4146 4146
35 Iceland 13061 G 4146 4146
36 Iceland 13062 T 4146 4146
37 Iceland 13063 A 4146 4146
38 Iceland 13064 T 4146 4146
39 Iceland 13065 T 4146 4146
40 Iceland 13066 A 4146 4146
41 Iceland 13067 T 4146 4146
42 Iceland 13068 C 4146 4146
43 Iceland 13069 T 4146 4146
44 Iceland 13070 T 4146 4146
45 Iceland 13071 T 4146 4146
46 Iceland 13072 C 4146 4146
47 Iceland 13073 T 4146 4146
48 Iceland 13074 G 4146 4146
49 Iceland 13075 T 4140 4140
50 Iceland 13076 G 4140 4140
51 Iceland 13077 C 4140 4140
52 Iceland 13078 T 4140 4140
53 Iceland 13079 T 4140 4140
54 Iceland 13080 T 4140 4140
55 Iceland 13081 T 4140 4140
56 Iceland 13082 G 4140 4140
57 Iceland 13083 C 4140 4140
58 Iceland 13084 T 4140 4140
59 Iceland 13085 G 4140 4140
60 Iceland 13086 T 4140 4140
61 Iceland 13087 A 4140 4140
62 Iceland 13088 G 4140 4140
63 Iceland 13089 A 4140 4139
64 Iceland 13090 T 4140 4140
65 Iceland 13091 G 4140 4140
66 Iceland 13092 C 4140 4140
67 Iceland 13093 T 4140 4140
68 Iceland 13094 G 4139 4139
69 Iceland 13095 C 4139 4138
70 Iceland 13096 T 4139 4139
71 Iceland 13097 A 4135 4132
72 Iceland 13098 A 4135 4132
73 Iceland 13099 A G 4135 4126 Lys4278Lys
74 Iceland 13100 G 4135 4132
75 Iceland 13101 C 4135 4133
76 Iceland 13102 T 4135 4132
77 Iceland 13103 T 4135 4133
78 Iceland 13104 A 4135 4133
79 Iceland 13105 C 4135 4133
80 Iceland 13106 A 4135 4133
81 Iceland 13107 A 4135 4133
82 Iceland 13108 A 4135 4131
83 Iceland 13109 G 4135 4133
84 Iceland 13110 A 4135 4133
85 Iceland 13111 T 4134 4132
86 Iceland 13112 T 4134 4132
87 Iceland 13113 A 4134 4132
88 Iceland 13114 T 4134 4132
89 Iceland 13115 C 4134 4132
90 Iceland 13116 T A 4134 4124 Leu4284Gln
91 Iceland 13117 A 4134 4132
92 Iceland 13118 G 4134 4132
93 Iceland 13119 C 4134 4132
94 Iceland 13120 T 4134 4133
95 Iceland 13121 A 4134 4133
96 Iceland 13122 G 4134 4133
97 Iceland 13123 T 4134 4111
98 Iceland 13124 G 4134 4112
99 Iceland 13125 G 4134 4133
100 Iceland 13126 G 4134 4132
101 Iceland 13127 G 4134 4133
102 Iceland 13128 G 4134 4133
103 Iceland 13129 A 4133 4132
104 Iceland 13130 C 4133 4132
105 Iceland 13131 A 4133 4133
106 Iceland 13132 A 4133 4133
107 Iceland 13133 C 4133 4133
108 Iceland 13134 C 4133 4133
109 Iceland 13135 A 4133 4133
110 Iceland 13136 A 4133 4133
111 Iceland 13137 T 4133 4133
112 Iceland 13138 C 4133 4133
113 Iceland 13139 A 4133 4133
114 Iceland 13140 C 4133 4133
115 Iceland 13141 T 4133 4133
116 Iceland 13142 A 4133 4133
117 Iceland 13143 A 4133 4133
118 Iceland 13144 T 4133 4133
119 Iceland 13145 T 4133 4133
120 Iceland 13146 G 4133 4133
121 Iceland 13147 T 4133 4133
122 Iceland 13148 G 4133 4133
123 Iceland 13149 T 4133 4133
124 Iceland 13150 T 4133 4133
125 Iceland 13151 A 4133 4133
126 Iceland 13152 A 4133 4133
127 Iceland 13153 G 4133 4133
128 Iceland 13154 A 4133 4133
129 Iceland 13155 T 4133 4133
130 Iceland 13156 G 4133 4133
131 Iceland 13157 T 4133 4130
132 Iceland 13158 T 4133 4130
133 Iceland 13159 G 4133 4130
134 Iceland 13160 T 4133 4130
135 Iceland 13161 G 4133 4130
136 Iceland 13162 T 4133 4130
137 Iceland 13163 A 4133 4130
138 Iceland 13164 C 4133 4130
139 Iceland 13165 A 4133 4130
140 Iceland 13166 C 4133 4130
141 Iceland 13167 A 4133 4129
142 Iceland 13168 C 4133 4130
143 Iceland 13169 A 4133 4130
144 Iceland 13170 C 4134 4130
145 Iceland 13171 T 4134 4132
146 Iceland 13172 G 4134 4132
147 Iceland 13173 G 4134 4132
148 Iceland 13174 T 4134 4131
149 Iceland 13175 A 4134 4132
150 Iceland 13176 C 4134 4132
151 Iceland 13177 T 4134 4132
152 Iceland 13178 G 4134 4132
153 Iceland 13179 G 4134 4132
154 Iceland 13180 T 4134 4132
155 Iceland 13181 C 4134 4132
156 Iceland 13182 A 4134 4132
157 Iceland 13183 G 4134 4133
158 Iceland 13184 G 4134 4133
159 Iceland 13185 C 4134 4133
160 Iceland 13186 A 4134 4133
161 Iceland 13187 A 4134 4133
162 Iceland 13188 T 4134 4133
163 Iceland 13189 A 4134 4133
164 Iceland 13190 A 4134 4134
165 Iceland 13191 C 4134 4133
166 Iceland 13192 A 4134 4133
167 Iceland 13193 G 4134 4133
168 Iceland 13194 T 4134 4133
169 Iceland 13195 T 4134 4134
170 Iceland 13196 A 4134 4134
171 Iceland 13197 C 4134 4134
172 Iceland 13198 A 4134 4133
173 Iceland 13199 C 4134 4134
174 Iceland 13200 C 4134 4134
175 Iceland 13201 G 4134 4133
176 Iceland 13202 G 4134 4133
177 Iceland 13203 A 4134 4134
178 Iceland 13204 A 4134 4134
179 Iceland 13205 G 4134 4134
180 Iceland 13206 C 4134 4134
181 Iceland 13207 C 4134 4134
182 Iceland 13208 A 4134 4134
183 Iceland 13209 A 4134 4134
184 Iceland 13210 T 4134 4134
185 Iceland 13211 A 4134 4134
186 Iceland 13212 T 4134 4134
187 Iceland 13213 G 4134 4134
188 Iceland 13214 G 4134 4134
189 Iceland 13215 A 4134 4134
190 Iceland 13216 T G 4134 4133 Asp4317Glu
191 Iceland 13217 C 4134 4134
192 Iceland 13218 A 4134 4134
193 Iceland 13219 A 4134 4134
194 Iceland 13220 G 4134 4134
195 Iceland 13221 A 4133 4133
196 Iceland 13222 A 4133 4133
197 Iceland 13223 T 4133 4133
198 Iceland 13224 C 4133 4132
199 Iceland 13225 C T 4133 4132 Ser4320Ser
200 Iceland 13226 T 4133 4133
201 Iceland 13227 T 4133 4133
202 Iceland 13228 T 4133 4132
203 Iceland 13229 G 4133 4132
204 Iceland 13230 G 4133 4132
205 Iceland 13231 T 4133 4132
206 Iceland 13232 G 4133 4132
207 Iceland 13233 G 4133 4132
208 Iceland 13234 T 4133 4132
209 Iceland 13235 G 4133 4132
210 Iceland 13236 C 4133 4132
211 Iceland 13237 A 4133 4132
212 Iceland 13238 T 4133 4132
213 Iceland 13239 C 4133 4132
214 Iceland 13240 G 4133 4132
215 Iceland 13241 T 4133 4132
216 Iceland 13242 G 4133 4132
217 Iceland 13243 T 4133 4132
218 Iceland 13244 T 4133 4132
219 Iceland 13245 G 4133 4131
220 Iceland 13246 T 4133 4132
221 Iceland 13247 C T 4133 4129 Leu4328Leu
222 Iceland 13248 T 4133 4131
223 Iceland 13249 G 4133 4131
224 Iceland 13250 T 4137 4136
225 Iceland 13251 A 4137 4136
226 Iceland 13252 C 4137 4136
227 Iceland 13253 T 4137 4136
228 Iceland 13254 G 4137 4136
229 Iceland 13255 C 4137 4137
230 Iceland 13256 C 4137 4137
231 Iceland 13257 G 4137 4137
232 Iceland 13258 T 4137 4137
233 Iceland 13259 T 4137 4137
234 Iceland 13260 G 4137 4137
235 Iceland 13261 C T 4137 4135 Cys4332Cys
236 Iceland 13262 C 4137 4137
237 Iceland 13263 A 4137 4136
238 Iceland 13264 C 4137 4137
239 Iceland 13265 A 4137 4137
240 Iceland 13266 T 4137 4137
241 Iceland 13267 A 4137 4137
242 Iceland 13268 G A 4137 4135 Asp4335Asn
243 Iceland 13269 A 4137 4136
244 Iceland 13270 T 4137 4136
245 Iceland 13271 C 4137 4136
246 Iceland 13272 A 4137 4137
247 Iceland 13273 T G 4137 4136 His4336Gln
248 Iceland 13274 C 4137 4136
249 Iceland 13275 C 4137 4137
250 Iceland 13276 A 4137 4137
251 Iceland 13277 A 4137 4137
252 Iceland 13278 A 4137 4137
253 Iceland 13279 T 4137 4137
254 Iceland 13280 C T 4137 4136 Pro4339Ser
255 Iceland 13281 C 4137 4137
256 Iceland 13282 T 4137 4137
257 Iceland 13283 A 4137 4137
258 Iceland 13284 A 4137 4137
259 Iceland 13285 A 4137 4137
260 Iceland 13286 G 4137 4137
261 Iceland 13287 G 4137 4137
262 Iceland 13288 A 4137 4137
263 Iceland 13289 T 4137 4137
264 Iceland 13290 T 4137 4137
265 Iceland 13291 T 4137 4137
266 Iceland 13292 T 4137 4137
267 Iceland 13293 G 4137 4137
268 Iceland 13294 T 4137 4136
269 Iceland 13295 G 4137 4135
270 Iceland 13296 A C 4137 4135 Asp4344Ala
271 Iceland 13297 C 4137 4136
272 Iceland 13298 T 4137 4136
273 Iceland 13299 T 4137 4136
274 Iceland 13300 A 4137 4136
275 Iceland 13301 A 4137 4136
276 Iceland 13302 A 4137 4136
277 Iceland 13303 A 4137 4136
278 Iceland 13304 G 4137 4136
279 Iceland 13305 G 4137 4136
280 Iceland 13306 T 4137 4136
281 Iceland 13307 A 4137 4135
282 Iceland 13308 A 4137 4136
283 Iceland 13309 G 4137 4136
284 Iceland 13310 T 4137 4136
285 Iceland 13311 A 4137 4136
286 Iceland 13312 T 4137 4136
287 Iceland 13313 G 4137 4136
288 Iceland 13314 T 4137 4135
289 Iceland 13315 A 4137 4135
290 Iceland 13316 C 4137 4135
291 Iceland 13317 A 4137 4134
292 Iceland 13318 A 4137 4135
293 Iceland 13319 A 4137 4135
294 Iceland 13320 T 4139 4139
295 Iceland 13321 A 4139 4139
296 Iceland 13322 C G 4139 4138 Pro4353Ala
297 Iceland 13323 C 4139 4139
298 Iceland 13324 T 4139 4139
299 Iceland 13325 A 4139 4139
300 Iceland 13326 C 4139 4139
301 Iceland 13327 A 4139 4139
302 Iceland 13328 A 4139 4139
303 Iceland 13329 C T 4139 4136 Thr4355Ile
304 Iceland 13330 T 4139 4139
305 Iceland 13331 T 4139 4139
306 Iceland 13332 G 4139 4139
307 Iceland 13333 T C 4139 4138 Cys4356Cys
308 Iceland 13334 G 4139 4139
309 Iceland 13335 C T 4139 4137 Ala4357Val
310 Iceland 13336 T 4139 4138
311 Iceland 13337 A 4139 4139
312 Iceland 13338 A 4139 4139
313 Iceland 13339 T 4139 4139
314 Iceland 13340 G 4139 4139
315 Iceland 13341 A 4139 4139
316 Iceland 13342 C 4139 4139
317 Iceland 13343 C 4139 4139
318 Iceland 13344 C 4136 4136
319 Iceland 13345 T 4142 4142
320 Iceland 13346 G 4142 4142
321 Iceland 13347 T 4142 4142
322 Iceland 13348 G T 4142 4141 Val4361Val
323 Iceland 13349 G 4142 4142
324 Iceland 13350 G 4143 4142
325 Iceland 13351 T 4143 4142
326 Iceland 13352 T 4143 4143
327 Iceland 13353 T 4143 4143
328 Iceland 13354 T 4143 4143
329 Iceland 13355 A 4143 4143
330 Iceland 13356 C 4143 4143
331 Iceland 13357 A 4143 4143
332 Iceland 13358 C 4143 4143
333 Iceland 13359 T 4143 4143
334 Iceland 13360 T C 4143 4141 Leu4365Leu
335 Iceland 13361 A 4143 4143
336 Iceland 13362 A 4143 4143
337 Iceland 13363 A 4143 4143
338 Iceland 13364 A 4143 4143
339 Iceland 13365 A 4143 4143
340 Iceland 13366 C 4143 4143
341 Iceland 13367 A 4143 4143
342 Iceland 13368 C 4143 4143
343 Iceland 13369 A 4143 4143
344 Iceland 13370 G 4143 4143
345 Iceland 13371 T 4143 4143
346 Iceland 13372 C T 4143 4137 Val4369Val
347 Iceland 13373 T 4143 4143
348 Iceland 13374 G 4143 4143
349 Iceland 13375 T 4143 4143
350 Iceland 13376 A 4143 4143
351 Iceland 13377 C A 4143 4142 Thr4371Asn
352 Iceland 13378 C 4142 4142
353 Iceland 13379 G 4101 4101
354 Iceland 13380 T 4101 4101
355 Iceland 13381 C T 4101 4100 Val4372Val
356 Iceland 13382 T 4101 4101
357 Iceland 13383 G 4101 4101
358 Iceland 13384 C 4101 4101
359 Iceland 13385 G 4101 4101
360 Iceland 13386 G 4101 4101
361 Iceland 13387 T 4101 4101
362 Iceland 13388 A 4101 4101
363 Iceland 13389 T 4101 4101
364 Iceland 13390 G 4101 4101
365 Iceland 13391 T 4101 4101
366 Iceland 13392 G 4101 4101
367 Iceland 13393 G 4101 4101
368 Iceland 13394 A 4101 4101
369 Iceland 13395 A 4101 4101
370 Iceland 13396 A 4101 4101
371 Iceland 13397 G 4101 4101
372 Iceland 13398 G 4101 4101
373 Iceland 13399 T 4101 4101
374 Iceland 13400 T 4101 4101
375 Iceland 13401 A 4005 4003
376 Iceland 13402 T 3984 3981
377 Iceland 13403 G 3980 3976
378 Iceland 13404 G 3975 3967
379 Iceland 13405 C 3975 3968
380 Iceland 13406 T 3975 3971
381 Iceland 13407 G 3973 3969
382 Iceland 13408 T 3972 3966
383 Iceland 13409 A 3972 3965
384 Iceland 13410 G 3972 3967
385 Iceland 13411 T 3972 3966
386 Iceland 13412 T 3972 3967
387 Iceland 13413 G 3972 3966
388 Iceland 13414 T 3972 3968
389 Iceland 13415 G 3972 3967
390 Iceland 13416 A 3972 3967
391 Iceland 13417 T 3972 3969
392 Iceland 13418 C 3972 3969
393 Iceland 13419 A 3972 3967
394 Iceland 13420 A 3972 3970
395 Iceland 13421 C 3970 3967
396 Iceland 13422 T 3970 3967
397 Iceland 13423 C 3970 3969
398 Iceland 13424 C 3970 3968
399 Iceland 13425 G 3969 3968
400 Iceland 13426 C T 3969 3966 Arg4387Arg
401 Iceland 13427 G 3969 3965
402 Iceland 13428 A 3969 3967
403 Iceland 13429 A 3969 3967
404 Iceland 13430 C 3969 3966
405 Iceland 13431 C T 3968 3965 Pro4389Leu
406 Iceland 13432 C 3968 3966
407 Iceland 13433 A 3968 3966
408 Iceland 13434 T 3968 3968
409 Iceland 13435 G 3968 3968
410 Iceland 13436 C 3968 3968
411 Iceland 13437 T 3968 3968
412 Iceland 13438 T 3968 3968
413 Iceland 13439 C 3968 3967
414 Iceland 13440 A 3967 3967
415 Iceland 13441 G 3967 3967