National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   416                                        
?                                            
A   38                                   1    
C   39                                        
D   21                                        
E   12                                        
F   15                                        
G   39                                        
H   9                                        
I   12                                        
K   24                                        
L   24                                        
M   12                                        
N   21                                        
P   24                                        
Q   18                                        
R   6                                        
S   18                                        
T   39                                        
V   27                                        
W   3                                        
Y   15                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Hungary 13026 C 278 278
1 Hungary 13027 T 278 278
2 Hungary 13028 G 278 278
3 Hungary 13029 G 278 278
4 Hungary 13030 T 278 278
5 Hungary 13031 A 278 278
6 Hungary 13032 A 278 278
7 Hungary 13033 T 278 278
8 Hungary 13034 G 278 278
9 Hungary 13035 C 278 278
10 Hungary 13036 A 278 278
11 Hungary 13037 A 278 278
12 Hungary 13038 C 278 278
13 Hungary 13039 A 278 278
14 Hungary 13040 G 278 278
15 Hungary 13041 A 278 278
16 Hungary 13042 A 278 278
17 Hungary 13043 G 278 278
18 Hungary 13044 T 278 278
19 Hungary 13045 G 278 278
20 Hungary 13046 C 278 278
21 Hungary 13047 C 278 278
22 Hungary 13048 T 278 278
23 Hungary 13049 G 278 278
24 Hungary 13050 C 278 278
25 Hungary 13051 C 278 278
26 Hungary 13052 A 278 278
27 Hungary 13053 A 278 278
28 Hungary 13054 T 278 278
29 Hungary 13055 T 278 278
30 Hungary 13056 C 278 278
31 Hungary 13057 A 278 278
32 Hungary 13058 A 278 278
33 Hungary 13059 C 278 278
34 Hungary 13060 T 278 278
35 Hungary 13061 G 278 278
36 Hungary 13062 T 278 278
37 Hungary 13063 A 278 278
38 Hungary 13064 T 278 278
39 Hungary 13065 T 278 278
40 Hungary 13066 A 278 278
41 Hungary 13067 T 278 278
42 Hungary 13068 C 278 278
43 Hungary 13069 T 278 278
44 Hungary 13070 T 278 278
45 Hungary 13071 T 278 278
46 Hungary 13072 C 278 278
47 Hungary 13073 T 278 278
48 Hungary 13074 G 278 278
49 Hungary 13075 T 278 278
50 Hungary 13076 G 278 278
51 Hungary 13077 C 278 278
52 Hungary 13078 T 278 278
53 Hungary 13079 T 278 278
54 Hungary 13080 T 278 278
55 Hungary 13081 T 278 278
56 Hungary 13082 G 278 278
57 Hungary 13083 C 278 278
58 Hungary 13084 T 278 278
59 Hungary 13085 G 278 278
60 Hungary 13086 T 278 278
61 Hungary 13087 A 278 278
62 Hungary 13088 G 278 278
63 Hungary 13089 A 278 278
64 Hungary 13090 T 278 278
65 Hungary 13091 G 278 278
66 Hungary 13092 C 278 278
67 Hungary 13093 T 278 278
68 Hungary 13094 G 278 278
69 Hungary 13095 C 278 278
70 Hungary 13096 T 278 278
71 Hungary 13097 A 278 278
72 Hungary 13098 A 278 278
73 Hungary 13099 A 278 278
74 Hungary 13100 G 278 278
75 Hungary 13101 C 278 278
76 Hungary 13102 T 278 278
77 Hungary 13103 T 278 278
78 Hungary 13104 A 278 278
79 Hungary 13105 C 278 278
80 Hungary 13106 A 278 278
81 Hungary 13107 A 278 278
82 Hungary 13108 A 278 278
83 Hungary 13109 G 278 278
84 Hungary 13110 A 278 278
85 Hungary 13111 T 278 278
86 Hungary 13112 T 278 278
87 Hungary 13113 A 278 278
88 Hungary 13114 T 278 278
89 Hungary 13115 C 278 278
90 Hungary 13116 T 278 278
91 Hungary 13117 A 278 278
92 Hungary 13118 G 278 278
93 Hungary 13119 C T 278 277 Ala4285Val
94 Hungary 13120 T 278 278
95 Hungary 13121 A 278 278
96 Hungary 13122 G 278 278
97 Hungary 13123 T 278 278
98 Hungary 13124 G 278 278
99 Hungary 13125 G 278 278
100 Hungary 13126 G 278 278
101 Hungary 13127 G 278 278
102 Hungary 13128 G 278 278
103 Hungary 13129 A 278 278
104 Hungary 13130 C 278 278
105 Hungary 13131 A 278 278
106 Hungary 13132 A 278 278
107 Hungary 13133 C 278 278
108 Hungary 13134 C 278 278
109 Hungary 13135 A 278 278
110 Hungary 13136 A 278 278
111 Hungary 13137 T 278 278
112 Hungary 13138 C 278 278
113 Hungary 13139 A 278 278
114 Hungary 13140 C 278 278
115 Hungary 13141 T 278 278
116 Hungary 13142 A 278 278
117 Hungary 13143 A 278 278
118 Hungary 13144 T 278 278
119 Hungary 13145 T 278 278
120 Hungary 13146 G 278 278
121 Hungary 13147 T 278 278
122 Hungary 13148 G 278 278
123 Hungary 13149 T 278 278
124 Hungary 13150 T 278 278
125 Hungary 13151 A 278 278
126 Hungary 13152 A 278 278
127 Hungary 13153 G 278 278
128 Hungary 13154 A 278 278
129 Hungary 13155 T 278 278
130 Hungary 13156 G 278 278
131 Hungary 13157 T 278 278
132 Hungary 13158 T 278 278
133 Hungary 13159 G 278 278
134 Hungary 13160 T 278 278
135 Hungary 13161 G 278 278
136 Hungary 13162 T 278 278
137 Hungary 13163 A 278 278
138 Hungary 13164 C 278 278
139 Hungary 13165 A 278 278
140 Hungary 13166 C 278 278
141 Hungary 13167 A 278 278
142 Hungary 13168 C 278 278
143 Hungary 13169 A 278 278
144 Hungary 13170 C 278 278
145 Hungary 13171 T 278 278
146 Hungary 13172 G 278 278
147 Hungary 13173 G 278 278
148 Hungary 13174 T 278 278
149 Hungary 13175 A 278 278
150 Hungary 13176 C 278 278
151 Hungary 13177 T 278 278
152 Hungary 13178 G 278 278
153 Hungary 13179 G 278 278
154 Hungary 13180 T 278 278
155 Hungary 13181 C 278 278
156 Hungary 13182 A 278 278
157 Hungary 13183 G 278 278
158 Hungary 13184 G 278 278
159 Hungary 13185 C 278 278
160 Hungary 13186 A 278 278
161 Hungary 13187 A 278 278
162 Hungary 13188 T 278 278
163 Hungary 13189 A 278 278
164 Hungary 13190 A 278 278
165 Hungary 13191 C 278 278
166 Hungary 13192 A 278 278
167 Hungary 13193 G 278 278
168 Hungary 13194 T 278 278
169 Hungary 13195 T 278 278
170 Hungary 13196 A 278 278
171 Hungary 13197 C 278 278
172 Hungary 13198 A 278 278
173 Hungary 13199 C 278 278
174 Hungary 13200 C 278 278
175 Hungary 13201 G 278 278
176 Hungary 13202 G 278 278
177 Hungary 13203 A 278 278
178 Hungary 13204 A 278 278
179 Hungary 13205 G 278 278
180 Hungary 13206 C 278 278
181 Hungary 13207 C 278 278
182 Hungary 13208 A 278 278
183 Hungary 13209 A 278 278
184 Hungary 13210 T 278 278
185 Hungary 13211 A 278 278
186 Hungary 13212 T 278 278
187 Hungary 13213 G 278 278
188 Hungary 13214 G 278 278
189 Hungary 13215 A 278 278
190 Hungary 13216 T 278 278
191 Hungary 13217 C 278 278
192 Hungary 13218 A 278 278
193 Hungary 13219 A 278 278
194 Hungary 13220 G 278 278
195 Hungary 13221 A 278 278
196 Hungary 13222 A 278 278
197 Hungary 13223 T 278 278
198 Hungary 13224 C 278 278
199 Hungary 13225 C 278 278
200 Hungary 13226 T 278 278
201 Hungary 13227 T 278 278
202 Hungary 13228 T 278 278
203 Hungary 13229 G 278 278
204 Hungary 13230 G 278 278
205 Hungary 13231 T 278 278
206 Hungary 13232 G 278 278
207 Hungary 13233 G 278 278
208 Hungary 13234 T 278 278
209 Hungary 13235 G 278 278
210 Hungary 13236 C 278 278
211 Hungary 13237 A 278 278
212 Hungary 13238 T 278 278
213 Hungary 13239 C 278 278
214 Hungary 13240 G 278 278
215 Hungary 13241 T 278 278
216 Hungary 13242 G 278 278
217 Hungary 13243 T 278 278
218 Hungary 13244 T 278 278
219 Hungary 13245 G 278 278
220 Hungary 13246 T 278 278
221 Hungary 13247 C 278 278
222 Hungary 13248 T 278 278
223 Hungary 13249 G 278 278
224 Hungary 13250 T 278 278
225 Hungary 13251 A 278 278
226 Hungary 13252 C 278 278
227 Hungary 13253 T 278 278
228 Hungary 13254 G 278 278
229 Hungary 13255 C 278 278
230 Hungary 13256 C 278 278
231 Hungary 13257 G 278 278
232 Hungary 13258 T 278 278
233 Hungary 13259 T 278 278
234 Hungary 13260 G 278 278
235 Hungary 13261 C 278 278
236 Hungary 13262 C 278 278
237 Hungary 13263 A 278 278
238 Hungary 13264 C 278 278
239 Hungary 13265 A 278 278
240 Hungary 13266 T 278 278
241 Hungary 13267 A 278 278
242 Hungary 13268 G 278 278
243 Hungary 13269 A 278 278
244 Hungary 13270 T 278 278
245 Hungary 13271 C 278 278
246 Hungary 13272 A 278 278
247 Hungary 13273 T 278 278
248 Hungary 13274 C 278 278
249 Hungary 13275 C 278 278
250 Hungary 13276 A 278 278
251 Hungary 13277 A 278 278
252 Hungary 13278 A 278 278
253 Hungary 13279 T 278 278
254 Hungary 13280 C 278 278
255 Hungary 13281 C 278 278
256 Hungary 13282 T 278 278
257 Hungary 13283 A 278 278
258 Hungary 13284 A 278 278
259 Hungary 13285 A 278 278
260 Hungary 13286 G 278 278
261 Hungary 13287 G 278 278
262 Hungary 13288 A 278 278
263 Hungary 13289 T 278 278
264 Hungary 13290 T 278 278
265 Hungary 13291 T 278 278
266 Hungary 13292 T 278 278
267 Hungary 13293 G 278 278
268 Hungary 13294 T 278 278
269 Hungary 13295 G 278 278
270 Hungary 13296 A 278 278
271 Hungary 13297 C 278 278
272 Hungary 13298 T 278 278
273 Hungary 13299 T 278 278
274 Hungary 13300 A 278 278
275 Hungary 13301 A 278 278
276 Hungary 13302 A 278 278
277 Hungary 13303 A 278 278
278 Hungary 13304 G 278 278
279 Hungary 13305 G 278 278
280 Hungary 13306 T 278 278
281 Hungary 13307 A 278 278
282 Hungary 13308 A 278 278
283 Hungary 13309 G 278 278
284 Hungary 13310 T 278 278
285 Hungary 13311 A 278 278
286 Hungary 13312 T 278 278
287 Hungary 13313 G 278 278
288 Hungary 13314 T 278 278
289 Hungary 13315 A 278 278
290 Hungary 13316 C 278 278
291 Hungary 13317 A 278 278
292 Hungary 13318 A 278 278
293 Hungary 13319 A 278 278
294 Hungary 13320 T 278 278
295 Hungary 13321 A 278 278
296 Hungary 13322 C 278 278
297 Hungary 13323 C 278 278
298 Hungary 13324 T 278 278
299 Hungary 13325 A 278 278
300 Hungary 13326 C 278 278
301 Hungary 13327 A 278 278
302 Hungary 13328 A 278 278
303 Hungary 13329 C 278 278
304 Hungary 13330 T 278 278
305 Hungary 13331 T 278 278
306 Hungary 13332 G 278 278
307 Hungary 13333 T 278 278
308 Hungary 13334 G 278 278
309 Hungary 13335 C 278 278
310 Hungary 13336 T 278 278
311 Hungary 13337 A 278 278
312 Hungary 13338 A 278 278
313 Hungary 13339 T 278 278
314 Hungary 13340 G 278 278
315 Hungary 13341 A 278 278
316 Hungary 13342 C 278 278
317 Hungary 13343 C 278 278
318 Hungary 13344 C 278 278
319 Hungary 13345 T 278 278
320 Hungary 13346 G 278 278
321 Hungary 13347 T 278 278
322 Hungary 13348 G 278 278
323 Hungary 13349 G 278 278
324 Hungary 13350 G 278 278
325 Hungary 13351 T 278 278
326 Hungary 13352 T 278 278
327 Hungary 13353 T 278 278
328 Hungary 13354 T 278 278
329 Hungary 13355 A 278 278
330 Hungary 13356 C 278 278
331 Hungary 13357 A 278 278
332 Hungary 13358 C 278 278
333 Hungary 13359 T 278 278
334 Hungary 13360 T 278 278
335 Hungary 13361 A 278 278
336 Hungary 13362 A 278 278
337 Hungary 13363 A 278 278
338 Hungary 13364 A 278 278
339 Hungary 13365 A 278 278
340 Hungary 13366 C 278 278
341 Hungary 13367 A 278 278
342 Hungary 13368 C 278 278
343 Hungary 13369 A 278 278
344 Hungary 13370 G 278 278
345 Hungary 13371 T 278 278
346 Hungary 13372 C 278 278
347 Hungary 13373 T 278 278
348 Hungary 13374 G 278 278
349 Hungary 13375 T 278 278
350 Hungary 13376 A 278 278
351 Hungary 13377 C 278 278
352 Hungary 13378 C 278 278
353 Hungary 13379 G 278 278
354 Hungary 13380 T 278 278
355 Hungary 13381 C 278 278
356 Hungary 13382 T 278 278
357 Hungary 13383 G 278 278
358 Hungary 13384 C 278 278
359 Hungary 13385 G 278 278
360 Hungary 13386 G 278 278
361 Hungary 13387 T 278 278
362 Hungary 13388 A 278 278
363 Hungary 13389 T 278 278
364 Hungary 13390 G 278 278
365 Hungary 13391 T 278 278
366 Hungary 13392 G 278 278
367 Hungary 13393 G 278 278
368 Hungary 13394 A 278 278
369 Hungary 13395 A 278 278
370 Hungary 13396 A 278 278
371 Hungary 13397 G 278 278
372 Hungary 13398 G 278 278
373 Hungary 13399 T 278 278
374 Hungary 13400 T 278 278
375 Hungary 13401 A 278 278
376 Hungary 13402 T 278 278
377 Hungary 13403 G 278 278
378 Hungary 13404 G 278 278
379 Hungary 13405 C 278 278
380 Hungary 13406 T 278 278
381 Hungary 13407 G 278 278
382 Hungary 13408 T 278 278
383 Hungary 13409 A 278 278
384 Hungary 13410 G 278 278
385 Hungary 13411 T 278 278
386 Hungary 13412 T 278 278
387 Hungary 13413 G 278 278
388 Hungary 13414 T 278 278
389 Hungary 13415 G 278 278
390 Hungary 13416 A 278 278
391 Hungary 13417 T 278 278
392 Hungary 13418 C 278 278
393 Hungary 13419 A 278 278
394 Hungary 13420 A 278 278
395 Hungary 13421 C 278 278
396 Hungary 13422 T 278 278
397 Hungary 13423 C 278 278
398 Hungary 13424 C 278 278
399 Hungary 13425 G 278 278
400 Hungary 13426 C 278 278
401 Hungary 13427 G 278 278
402 Hungary 13428 A 278 278
403 Hungary 13429 A 278 278
404 Hungary 13430 C 278 278
405 Hungary 13431 C 278 278
406 Hungary 13432 C 278 278
407 Hungary 13433 A 278 278
408 Hungary 13434 T 278 278
409 Hungary 13435 G 278 278
410 Hungary 13436 C 278 278
411 Hungary 13437 T 278 278
412 Hungary 13438 T 278 278
413 Hungary 13439 C 278 278
414 Hungary 13440 A 278 278
415 Hungary 13441 G 278 278