National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   416                                        
?                                            
A   38                                        
C   39                                        
D   21                                        
E   12                                        
F   15                                        
G   39                                        
H   9                                        
I   12                                        
K   24                                        
L   24                                        
M   12                                        
N   21                                        
P   24                                        
Q   18                                        
R   6                                        
S   18                                        
T   39                                        
V   27                                        
W   3                                        
Y   15                                       1

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 CotedIvoire 13026 C 65 65
1 CotedIvoire 13027 T 65 65
2 CotedIvoire 13028 G 65 65
3 CotedIvoire 13029 G 65 65
4 CotedIvoire 13030 T 65 65
5 CotedIvoire 13031 A 65 65
6 CotedIvoire 13032 A 65 65
7 CotedIvoire 13033 T 65 65
8 CotedIvoire 13034 G 65 65
9 CotedIvoire 13035 C 65 65
10 CotedIvoire 13036 A 65 65
11 CotedIvoire 13037 A 65 65
12 CotedIvoire 13038 C 65 65
13 CotedIvoire 13039 A 65 65
14 CotedIvoire 13040 G 65 65
15 CotedIvoire 13041 A 65 65
16 CotedIvoire 13042 A 65 65
17 CotedIvoire 13043 G 65 65
18 CotedIvoire 13044 T 65 65
19 CotedIvoire 13045 G 65 65
20 CotedIvoire 13046 C 65 65
21 CotedIvoire 13047 C 65 65
22 CotedIvoire 13048 T 65 65
23 CotedIvoire 13049 G 65 65
24 CotedIvoire 13050 C 65 65
25 CotedIvoire 13051 C 65 65
26 CotedIvoire 13052 A 65 65
27 CotedIvoire 13053 A 65 65
28 CotedIvoire 13054 T 65 65
29 CotedIvoire 13055 T 65 65
30 CotedIvoire 13056 C 65 65
31 CotedIvoire 13057 A 65 65
32 CotedIvoire 13058 A 65 65
33 CotedIvoire 13059 C 65 65
34 CotedIvoire 13060 T 65 65
35 CotedIvoire 13061 G 65 65
36 CotedIvoire 13062 T 65 65
37 CotedIvoire 13063 A 65 65
38 CotedIvoire 13064 T 65 65
39 CotedIvoire 13065 T 65 65
40 CotedIvoire 13066 A 65 65
41 CotedIvoire 13067 T 65 65
42 CotedIvoire 13068 C 65 65
43 CotedIvoire 13069 T 65 65
44 CotedIvoire 13070 T 65 65
45 CotedIvoire 13071 T 65 65
46 CotedIvoire 13072 C 65 65
47 CotedIvoire 13073 T 65 65
48 CotedIvoire 13074 G 65 65
49 CotedIvoire 13075 T 65 65
50 CotedIvoire 13076 G 65 65
51 CotedIvoire 13077 C 65 65
52 CotedIvoire 13078 T 65 65
53 CotedIvoire 13079 T 65 65
54 CotedIvoire 13080 T 65 65
55 CotedIvoire 13081 T 65 65
56 CotedIvoire 13082 G 65 65
57 CotedIvoire 13083 C 65 65
58 CotedIvoire 13084 T 65 65
59 CotedIvoire 13085 G 65 65
60 CotedIvoire 13086 T 65 65
61 CotedIvoire 13087 A 65 65
62 CotedIvoire 13088 G 65 65
63 CotedIvoire 13089 A 65 65
64 CotedIvoire 13090 T 65 65
65 CotedIvoire 13091 G 65 65
66 CotedIvoire 13092 C 65 65
67 CotedIvoire 13093 T 65 65
68 CotedIvoire 13094 G 65 65
69 CotedIvoire 13095 C 65 65
70 CotedIvoire 13096 T 65 65
71 CotedIvoire 13097 A 65 65
72 CotedIvoire 13098 A 65 65
73 CotedIvoire 13099 A 65 65
74 CotedIvoire 13100 G 65 65
75 CotedIvoire 13101 C 65 65
76 CotedIvoire 13102 T 65 65
77 CotedIvoire 13103 T 65 65
78 CotedIvoire 13104 A 65 65
79 CotedIvoire 13105 C 65 65
80 CotedIvoire 13106 A 65 65
81 CotedIvoire 13107 A 65 65
82 CotedIvoire 13108 A 65 65
83 CotedIvoire 13109 G 65 65
84 CotedIvoire 13110 A 65 65
85 CotedIvoire 13111 T 65 65
86 CotedIvoire 13112 T 65 65
87 CotedIvoire 13113 A 65 65
88 CotedIvoire 13114 T 65 65
89 CotedIvoire 13115 C 65 65
90 CotedIvoire 13116 T 65 65
91 CotedIvoire 13117 A 65 65
92 CotedIvoire 13118 G 65 65
93 CotedIvoire 13119 C 65 65
94 CotedIvoire 13120 T 65 65
95 CotedIvoire 13121 A 65 65
96 CotedIvoire 13122 G 65 65
97 CotedIvoire 13123 T 65 65
98 CotedIvoire 13124 G 65 60
99 CotedIvoire 13125 G 65 65
100 CotedIvoire 13126 G 65 65
101 CotedIvoire 13127 G 65 65
102 CotedIvoire 13128 G 65 56
103 CotedIvoire 13129 A 65 65
104 CotedIvoire 13130 C 65 65
105 CotedIvoire 13131 A 65 65
106 CotedIvoire 13132 A 65 65
107 CotedIvoire 13133 C 65 65
108 CotedIvoire 13134 C 65 65
109 CotedIvoire 13135 A 65 65
110 CotedIvoire 13136 A 65 65
111 CotedIvoire 13137 T 65 65
112 CotedIvoire 13138 C 65 65
113 CotedIvoire 13139 A 65 65
114 CotedIvoire 13140 C 65 65
115 CotedIvoire 13141 T 65 65
116 CotedIvoire 13142 A 65 65
117 CotedIvoire 13143 A 65 65
118 CotedIvoire 13144 T 65 65
119 CotedIvoire 13145 T 65 65
120 CotedIvoire 13146 G 65 65
121 CotedIvoire 13147 T 65 65
122 CotedIvoire 13148 G 65 65
123 CotedIvoire 13149 T 65 65
124 CotedIvoire 13150 T 65 65
125 CotedIvoire 13151 A 65 65
126 CotedIvoire 13152 A 65 65
127 CotedIvoire 13153 G 65 65
128 CotedIvoire 13154 A 65 65
129 CotedIvoire 13155 T 65 65
130 CotedIvoire 13156 G 65 65
131 CotedIvoire 13157 T 65 65
132 CotedIvoire 13158 T 65 65
133 CotedIvoire 13159 G 65 65
134 CotedIvoire 13160 T 65 65
135 CotedIvoire 13161 G 65 65
136 CotedIvoire 13162 T 65 65
137 CotedIvoire 13163 A 65 65
138 CotedIvoire 13164 C 65 65
139 CotedIvoire 13165 A 65 65
140 CotedIvoire 13166 C 65 65
141 CotedIvoire 13167 A 65 65
142 CotedIvoire 13168 C 65 65
143 CotedIvoire 13169 A 65 65
144 CotedIvoire 13170 C 65 65
145 CotedIvoire 13171 T 65 65
146 CotedIvoire 13172 G 65 65
147 CotedIvoire 13173 G 65 65
148 CotedIvoire 13174 T 65 65
149 CotedIvoire 13175 A 65 65
150 CotedIvoire 13176 C 65 65
151 CotedIvoire 13177 T 65 65
152 CotedIvoire 13178 G 65 65
153 CotedIvoire 13179 G 65 65
154 CotedIvoire 13180 T 65 65
155 CotedIvoire 13181 C 65 65
156 CotedIvoire 13182 A 65 65
157 CotedIvoire 13183 G 65 65
158 CotedIvoire 13184 G 65 65
159 CotedIvoire 13185 C 65 65
160 CotedIvoire 13186 A 65 65
161 CotedIvoire 13187 A 65 65
162 CotedIvoire 13188 T 65 65
163 CotedIvoire 13189 A 65 65
164 CotedIvoire 13190 A 65 65
165 CotedIvoire 13191 C 65 65
166 CotedIvoire 13192 A 65 65
167 CotedIvoire 13193 G 65 65
168 CotedIvoire 13194 T 65 65
169 CotedIvoire 13195 T 65 65
170 CotedIvoire 13196 A 65 65
171 CotedIvoire 13197 C 65 65
172 CotedIvoire 13198 A 65 65
173 CotedIvoire 13199 C 65 65
174 CotedIvoire 13200 C 65 65
175 CotedIvoire 13201 G 65 65
176 CotedIvoire 13202 G 65 65
177 CotedIvoire 13203 A 65 65
178 CotedIvoire 13204 A 65 65
179 CotedIvoire 13205 G 65 65
180 CotedIvoire 13206 C 65 65
181 CotedIvoire 13207 C 65 65
182 CotedIvoire 13208 A 65 65
183 CotedIvoire 13209 A 65 65
184 CotedIvoire 13210 T 65 65
185 CotedIvoire 13211 A 65 65
186 CotedIvoire 13212 T 65 65
187 CotedIvoire 13213 G 65 65
188 CotedIvoire 13214 G 65 65
189 CotedIvoire 13215 A 65 65
190 CotedIvoire 13216 T 65 65
191 CotedIvoire 13217 C 65 65
192 CotedIvoire 13218 A 65 65
193 CotedIvoire 13219 A 65 65
194 CotedIvoire 13220 G 65 65
195 CotedIvoire 13221 A 65 65
196 CotedIvoire 13222 A 65 65
197 CotedIvoire 13223 T 65 65
198 CotedIvoire 13224 C 65 65
199 CotedIvoire 13225 C 65 65
200 CotedIvoire 13226 T 65 65
201 CotedIvoire 13227 T 65 65
202 CotedIvoire 13228 T 65 65
203 CotedIvoire 13229 G 65 65
204 CotedIvoire 13230 G 65 65
205 CotedIvoire 13231 T 65 65
206 CotedIvoire 13232 G 65 65
207 CotedIvoire 13233 G 65 65
208 CotedIvoire 13234 T 65 65
209 CotedIvoire 13235 G 65 65
210 CotedIvoire 13236 C 65 65
211 CotedIvoire 13237 A 65 65
212 CotedIvoire 13238 T 65 65
213 CotedIvoire 13239 C 65 65
214 CotedIvoire 13240 G 65 65
215 CotedIvoire 13241 T 65 65
216 CotedIvoire 13242 G 65 65
217 CotedIvoire 13243 T 65 65
218 CotedIvoire 13244 T 65 65
219 CotedIvoire 13245 G 65 65
220 CotedIvoire 13246 T 65 65
221 CotedIvoire 13247 C 65 65
222 CotedIvoire 13248 T 65 65
223 CotedIvoire 13249 G 65 65
224 CotedIvoire 13250 T 65 65
225 CotedIvoire 13251 A 65 65
226 CotedIvoire 13252 C T 65 61 Tyr4329Tyr
227 CotedIvoire 13253 T 65 65
228 CotedIvoire 13254 G 65 65
229 CotedIvoire 13255 C 65 65
230 CotedIvoire 13256 C 65 65
231 CotedIvoire 13257 G 65 65
232 CotedIvoire 13258 T 65 65
233 CotedIvoire 13259 T 65 65
234 CotedIvoire 13260 G 65 65
235 CotedIvoire 13261 C 65 65
236 CotedIvoire 13262 C 65 65
237 CotedIvoire 13263 A 65 65
238 CotedIvoire 13264 C 65 65
239 CotedIvoire 13265 A 65 65
240 CotedIvoire 13266 T 65 65
241 CotedIvoire 13267 A 65 65
242 CotedIvoire 13268 G 65 65
243 CotedIvoire 13269 A 65 65
244 CotedIvoire 13270 T 65 65
245 CotedIvoire 13271 C 65 65
246 CotedIvoire 13272 A 65 65
247 CotedIvoire 13273 T 65 65
248 CotedIvoire 13274 C 65 65
249 CotedIvoire 13275 C 65 65
250 CotedIvoire 13276 A 65 65
251 CotedIvoire 13277 A 65 65
252 CotedIvoire 13278 A 65 65
253 CotedIvoire 13279 T 65 65
254 CotedIvoire 13280 C 65 65
255 CotedIvoire 13281 C 65 65
256 CotedIvoire 13282 T 65 65
257 CotedIvoire 13283 A 65 65
258 CotedIvoire 13284 A 65 65
259 CotedIvoire 13285 A 65 65
260 CotedIvoire 13286 G 65 65
261 CotedIvoire 13287 G 65 65
262 CotedIvoire 13288 A 65 65
263 CotedIvoire 13289 T 65 65
264 CotedIvoire 13290 T 65 65
265 CotedIvoire 13291 T 65 65
266 CotedIvoire 13292 T 65 65
267 CotedIvoire 13293 G 65 65
268 CotedIvoire 13294 T 65 65
269 CotedIvoire 13295 G 65 65
270 CotedIvoire 13296 A 65 65
271 CotedIvoire 13297 C 65 65
272 CotedIvoire 13298 T 65 65
273 CotedIvoire 13299 T 65 65
274 CotedIvoire 13300 A 65 65
275 CotedIvoire 13301 A 65 65
276 CotedIvoire 13302 A 65 65
277 CotedIvoire 13303 A 65 65
278 CotedIvoire 13304 G 65 65
279 CotedIvoire 13305 G 65 65
280 CotedIvoire 13306 T 65 65
281 CotedIvoire 13307 A 65 65
282 CotedIvoire 13308 A 65 65
283 CotedIvoire 13309 G 65 65
284 CotedIvoire 13310 T 65 65
285 CotedIvoire 13311 A 65 65
286 CotedIvoire 13312 T 65 65
287 CotedIvoire 13313 G 65 65
288 CotedIvoire 13314 T 65 65
289 CotedIvoire 13315 A 65 65
290 CotedIvoire 13316 C 65 65
291 CotedIvoire 13317 A 65 65
292 CotedIvoire 13318 A 65 65
293 CotedIvoire 13319 A 65 65
294 CotedIvoire 13320 T 65 65
295 CotedIvoire 13321 A 65 65
296 CotedIvoire 13322 C 65 65
297 CotedIvoire 13323 C 65 65
298 CotedIvoire 13324 T 65 65
299 CotedIvoire 13325 A 65 65
300 CotedIvoire 13326 C 65 65
301 CotedIvoire 13327 A 65 65
302 CotedIvoire 13328 A 65 65
303 CotedIvoire 13329 C 65 65
304 CotedIvoire 13330 T 65 65
305 CotedIvoire 13331 T 65 65
306 CotedIvoire 13332 G 65 65
307 CotedIvoire 13333 T 65 65
308 CotedIvoire 13334 G 65 65
309 CotedIvoire 13335 C 65 65
310 CotedIvoire 13336 T 65 65
311 CotedIvoire 13337 A 65 65
312 CotedIvoire 13338 A 65 65
313 CotedIvoire 13339 T 65 65
314 CotedIvoire 13340 G 65 65
315 CotedIvoire 13341 A 65 65
316 CotedIvoire 13342 C 65 65
317 CotedIvoire 13343 C 65 65
318 CotedIvoire 13344 C 65 65
319 CotedIvoire 13345 T 65 65
320 CotedIvoire 13346 G 65 65
321 CotedIvoire 13347 T 65 65
322 CotedIvoire 13348 G 65 65
323 CotedIvoire 13349 G 65 65
324 CotedIvoire 13350 G 65 65
325 CotedIvoire 13351 T 65 65
326 CotedIvoire 13352 T 65 65
327 CotedIvoire 13353 T 65 65
328 CotedIvoire 13354 T 65 65
329 CotedIvoire 13355 A 65 65
330 CotedIvoire 13356 C 65 65
331 CotedIvoire 13357 A 65 65
332 CotedIvoire 13358 C 65 65
333 CotedIvoire 13359 T 65 65
334 CotedIvoire 13360 T 65 65
335 CotedIvoire 13361 A 65 65
336 CotedIvoire 13362 A 65 65
337 CotedIvoire 13363 A 65 65
338 CotedIvoire 13364 A 65 65
339 CotedIvoire 13365 A 65 65
340 CotedIvoire 13366 C 65 65
341 CotedIvoire 13367 A 65 65
342 CotedIvoire 13368 C 65 65
343 CotedIvoire 13369 A 65 65
344 CotedIvoire 13370 G 65 65
345 CotedIvoire 13371 T 65 65
346 CotedIvoire 13372 C 65 65
347 CotedIvoire 13373 T 65 65
348 CotedIvoire 13374 G 65 65
349 CotedIvoire 13375 T 65 65
350 CotedIvoire 13376 A 65 65
351 CotedIvoire 13377 C 65 65
352 CotedIvoire 13378 C 65 65
353 CotedIvoire 13379 G 51 51
354 CotedIvoire 13380 T 51 51
355 CotedIvoire 13381 C 51 51
356 CotedIvoire 13382 T 51 51
357 CotedIvoire 13383 G 51 51
358 CotedIvoire 13384 C 51 51
359 CotedIvoire 13385 G 51 51
360 CotedIvoire 13386 G 51 51
361 CotedIvoire 13387 T 51 51
362 CotedIvoire 13388 A 51 51
363 CotedIvoire 13389 T 51 51
364 CotedIvoire 13390 G 51 51
365 CotedIvoire 13391 T 51 51
366 CotedIvoire 13392 G 51 51
367 CotedIvoire 13393 G 51 51
368 CotedIvoire 13394 A 51 51
369 CotedIvoire 13395 A 51 51
370 CotedIvoire 13396 A 51 51
371 CotedIvoire 13397 G 51 51
372 CotedIvoire 13398 G 51 51
373 CotedIvoire 13399 T 51 51
374 CotedIvoire 13400 T 51 51
375 CotedIvoire 13401 A 51 51
376 CotedIvoire 13402 T 51 51
377 CotedIvoire 13403 G 51 51
378 CotedIvoire 13404 G 51 51
379 CotedIvoire 13405 C 51 51
380 CotedIvoire 13406 T 51 51
381 CotedIvoire 13407 G 51 51
382 CotedIvoire 13408 T 51 51
383 CotedIvoire 13409 A 51 51
384 CotedIvoire 13410 G 51 51
385 CotedIvoire 13411 T 51 51
386 CotedIvoire 13412 T 51 51
387 CotedIvoire 13413 G 51 51
388 CotedIvoire 13414 T 51 51
389 CotedIvoire 13415 G 51 51
390 CotedIvoire 13416 A 51 51
391 CotedIvoire 13417 T 51 51
392 CotedIvoire 13418 C 51 51
393 CotedIvoire 13419 A 51 51
394 CotedIvoire 13420 A 51 51
395 CotedIvoire 13421 C 51 51
396 CotedIvoire 13422 T 51 51
397 CotedIvoire 13423 C 51 51
398 CotedIvoire 13424 C 51 51
399 CotedIvoire 13425 G 51 51
400 CotedIvoire 13426 C 51 51
401 CotedIvoire 13427 G 51 51
402 CotedIvoire 13428 A 51 51
403 CotedIvoire 13429 A 51 51
404 CotedIvoire 13430 C 51 51
405 CotedIvoire 13431 C 51 51
406 CotedIvoire 13432 C 51 51
407 CotedIvoire 13433 A 51 51
408 CotedIvoire 13434 T 51 51
409 CotedIvoire 13435 G 51 51
410 CotedIvoire 13436 C 51 51
411 CotedIvoire 13437 T 51 51
412 CotedIvoire 13438 T 51 51
413 CotedIvoire 13439 C 51 51
414 CotedIvoire 13440 A 51 51
415 CotedIvoire 13441 G 51 51