National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   416                                        
?                                            
A   38                                        
C   39                                        
D   21                                        
E   12                                        
F   15                                        
G   39                                        
H   9                                        
I   12                                        
K   24                                        
L   24                                        
M   12                                        
N   21                                        
P   24                                        
Q   18                                        
R   6                                        
S   18                                        
T   39                                        
V   27                                        
W   3                                        
Y   15                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Bulgaria 13026 C 15 15
1 Bulgaria 13027 T 15 15
2 Bulgaria 13028 G 15 15
3 Bulgaria 13029 G 15 15
4 Bulgaria 13030 T 15 15
5 Bulgaria 13031 A 15 15
6 Bulgaria 13032 A 15 15
7 Bulgaria 13033 T 15 15
8 Bulgaria 13034 G 15 15
9 Bulgaria 13035 C 15 15
10 Bulgaria 13036 A 15 15
11 Bulgaria 13037 A 15 15
12 Bulgaria 13038 C 15 15
13 Bulgaria 13039 A 15 15
14 Bulgaria 13040 G 15 15
15 Bulgaria 13041 A 15 15
16 Bulgaria 13042 A 15 15
17 Bulgaria 13043 G 15 15
18 Bulgaria 13044 T 15 15
19 Bulgaria 13045 G 15 15
20 Bulgaria 13046 C 15 15
21 Bulgaria 13047 C 15 15
22 Bulgaria 13048 T 15 15
23 Bulgaria 13049 G 15 15
24 Bulgaria 13050 C 15 15
25 Bulgaria 13051 C 15 15
26 Bulgaria 13052 A 15 15
27 Bulgaria 13053 A 15 15
28 Bulgaria 13054 T 15 15
29 Bulgaria 13055 T 15 15
30 Bulgaria 13056 C 15 15
31 Bulgaria 13057 A 15 15
32 Bulgaria 13058 A 15 15
33 Bulgaria 13059 C 15 15
34 Bulgaria 13060 T 15 15
35 Bulgaria 13061 G 15 15
36 Bulgaria 13062 T 15 15
37 Bulgaria 13063 A 15 15
38 Bulgaria 13064 T 15 15
39 Bulgaria 13065 T 15 15
40 Bulgaria 13066 A 15 15
41 Bulgaria 13067 T 15 15
42 Bulgaria 13068 C 15 15
43 Bulgaria 13069 T 15 15
44 Bulgaria 13070 T 15 15
45 Bulgaria 13071 T 15 15
46 Bulgaria 13072 C 15 15
47 Bulgaria 13073 T 15 15
48 Bulgaria 13074 G 15 15
49 Bulgaria 13075 T 15 15
50 Bulgaria 13076 G 15 15
51 Bulgaria 13077 C 15 15
52 Bulgaria 13078 T 15 15
53 Bulgaria 13079 T 15 15
54 Bulgaria 13080 T 15 15
55 Bulgaria 13081 T 15 15
56 Bulgaria 13082 G 15 15
57 Bulgaria 13083 C 15 15
58 Bulgaria 13084 T 15 15
59 Bulgaria 13085 G 15 15
60 Bulgaria 13086 T 15 15
61 Bulgaria 13087 A 15 15
62 Bulgaria 13088 G 15 15
63 Bulgaria 13089 A 15 15
64 Bulgaria 13090 T 15 15
65 Bulgaria 13091 G 15 15
66 Bulgaria 13092 C 15 15
67 Bulgaria 13093 T 15 15
68 Bulgaria 13094 G 15 15
69 Bulgaria 13095 C 15 15
70 Bulgaria 13096 T 15 15
71 Bulgaria 13097 A 15 15
72 Bulgaria 13098 A 15 15
73 Bulgaria 13099 A 15 15
74 Bulgaria 13100 G 15 15
75 Bulgaria 13101 C 15 15
76 Bulgaria 13102 T 15 15
77 Bulgaria 13103 T 15 15
78 Bulgaria 13104 A 15 15
79 Bulgaria 13105 C 15 15
80 Bulgaria 13106 A 15 15
81 Bulgaria 13107 A 15 15
82 Bulgaria 13108 A 15 15
83 Bulgaria 13109 G 15 15
84 Bulgaria 13110 A 15 15
85 Bulgaria 13111 T 15 15
86 Bulgaria 13112 T 15 15
87 Bulgaria 13113 A 15 15
88 Bulgaria 13114 T 15 15
89 Bulgaria 13115 C 15 15
90 Bulgaria 13116 T 15 15
91 Bulgaria 13117 A 15 15
92 Bulgaria 13118 G 15 15
93 Bulgaria 13119 C 15 15
94 Bulgaria 13120 T 15 15
95 Bulgaria 13121 A 15 15
96 Bulgaria 13122 G 15 15
97 Bulgaria 13123 T 15 15
98 Bulgaria 13124 G 15 15
99 Bulgaria 13125 G 15 15
100 Bulgaria 13126 G 15 15
101 Bulgaria 13127 G 15 15
102 Bulgaria 13128 G 15 15
103 Bulgaria 13129 A 15 15
104 Bulgaria 13130 C 15 15
105 Bulgaria 13131 A 15 15
106 Bulgaria 13132 A 15 15
107 Bulgaria 13133 C 15 15
108 Bulgaria 13134 C 15 15
109 Bulgaria 13135 A 15 15
110 Bulgaria 13136 A 15 15
111 Bulgaria 13137 T 15 15
112 Bulgaria 13138 C 15 15
113 Bulgaria 13139 A 15 15
114 Bulgaria 13140 C 15 15
115 Bulgaria 13141 T 15 15
116 Bulgaria 13142 A 15 15
117 Bulgaria 13143 A 15 15
118 Bulgaria 13144 T 15 15
119 Bulgaria 13145 T 15 15
120 Bulgaria 13146 G 15 15
121 Bulgaria 13147 T 15 15
122 Bulgaria 13148 G 15 15
123 Bulgaria 13149 T 15 15
124 Bulgaria 13150 T 15 15
125 Bulgaria 13151 A 15 15
126 Bulgaria 13152 A 15 15
127 Bulgaria 13153 G 15 15
128 Bulgaria 13154 A 15 15
129 Bulgaria 13155 T 15 15
130 Bulgaria 13156 G 15 15
131 Bulgaria 13157 T 15 15
132 Bulgaria 13158 T 15 15
133 Bulgaria 13159 G 15 15
134 Bulgaria 13160 T 15 15
135 Bulgaria 13161 G 15 15
136 Bulgaria 13162 T 15 15
137 Bulgaria 13163 A 15 15
138 Bulgaria 13164 C 15 15
139 Bulgaria 13165 A 15 15
140 Bulgaria 13166 C 15 15
141 Bulgaria 13167 A 15 15
142 Bulgaria 13168 C 15 15
143 Bulgaria 13169 A 15 15
144 Bulgaria 13170 C 15 15
145 Bulgaria 13171 T 15 15
146 Bulgaria 13172 G 15 15
147 Bulgaria 13173 G 15 15
148 Bulgaria 13174 T 15 15
149 Bulgaria 13175 A 15 15
150 Bulgaria 13176 C 15 15
151 Bulgaria 13177 T 15 15
152 Bulgaria 13178 G 15 15
153 Bulgaria 13179 G 15 15
154 Bulgaria 13180 T 15 15
155 Bulgaria 13181 C 15 15
156 Bulgaria 13182 A 15 15
157 Bulgaria 13183 G 15 15
158 Bulgaria 13184 G 15 15
159 Bulgaria 13185 C 15 15
160 Bulgaria 13186 A 15 15
161 Bulgaria 13187 A 15 15
162 Bulgaria 13188 T 15 15
163 Bulgaria 13189 A 15 15
164 Bulgaria 13190 A 15 15
165 Bulgaria 13191 C 15 15
166 Bulgaria 13192 A 15 15
167 Bulgaria 13193 G 15 15
168 Bulgaria 13194 T 15 15
169 Bulgaria 13195 T 15 15
170 Bulgaria 13196 A 15 15
171 Bulgaria 13197 C 15 15
172 Bulgaria 13198 A 15 15
173 Bulgaria 13199 C 15 15
174 Bulgaria 13200 C 15 15
175 Bulgaria 13201 G 15 15
176 Bulgaria 13202 G 15 15
177 Bulgaria 13203 A 15 15
178 Bulgaria 13204 A 15 15
179 Bulgaria 13205 G 15 15
180 Bulgaria 13206 C 15 15
181 Bulgaria 13207 C 15 15
182 Bulgaria 13208 A 15 15
183 Bulgaria 13209 A 15 15
184 Bulgaria 13210 T 15 15
185 Bulgaria 13211 A 15 15
186 Bulgaria 13212 T 15 15
187 Bulgaria 13213 G 15 15
188 Bulgaria 13214 G 15 15
189 Bulgaria 13215 A 15 15
190 Bulgaria 13216 T 15 15
191 Bulgaria 13217 C 15 15
192 Bulgaria 13218 A 15 15
193 Bulgaria 13219 A 15 15
194 Bulgaria 13220 G 15 15
195 Bulgaria 13221 A 15 15
196 Bulgaria 13222 A 15 15
197 Bulgaria 13223 T 15 15
198 Bulgaria 13224 C 15 15
199 Bulgaria 13225 C 15 15
200 Bulgaria 13226 T 15 15
201 Bulgaria 13227 T 15 15
202 Bulgaria 13228 T 15 15
203 Bulgaria 13229 G 15 15
204 Bulgaria 13230 G 15 15
205 Bulgaria 13231 T 15 15
206 Bulgaria 13232 G 15 15
207 Bulgaria 13233 G 15 15
208 Bulgaria 13234 T 15 15
209 Bulgaria 13235 G 15 15
210 Bulgaria 13236 C 15 15
211 Bulgaria 13237 A 15 15
212 Bulgaria 13238 T 15 15
213 Bulgaria 13239 C 15 15
214 Bulgaria 13240 G 15 15
215 Bulgaria 13241 T 15 15
216 Bulgaria 13242 G 15 15
217 Bulgaria 13243 T 15 15
218 Bulgaria 13244 T 15 15
219 Bulgaria 13245 G 15 15
220 Bulgaria 13246 T 15 15
221 Bulgaria 13247 C 15 15
222 Bulgaria 13248 T 15 15
223 Bulgaria 13249 G 15 15
224 Bulgaria 13250 T 15 15
225 Bulgaria 13251 A 15 15
226 Bulgaria 13252 C 15 15
227 Bulgaria 13253 T 15 15
228 Bulgaria 13254 G 15 15
229 Bulgaria 13255 C 15 15
230 Bulgaria 13256 C 15 15
231 Bulgaria 13257 G 15 15
232 Bulgaria 13258 T 15 15
233 Bulgaria 13259 T 15 15
234 Bulgaria 13260 G 15 15
235 Bulgaria 13261 C 15 15
236 Bulgaria 13262 C 15 15
237 Bulgaria 13263 A 15 15
238 Bulgaria 13264 C 15 15
239 Bulgaria 13265 A 15 15
240 Bulgaria 13266 T 15 15
241 Bulgaria 13267 A 15 15
242 Bulgaria 13268 G 15 15
243 Bulgaria 13269 A 15 15
244 Bulgaria 13270 T 15 15
245 Bulgaria 13271 C 15 15
246 Bulgaria 13272 A 15 15
247 Bulgaria 13273 T 15 15
248 Bulgaria 13274 C 15 15
249 Bulgaria 13275 C 15 15
250 Bulgaria 13276 A 15 15
251 Bulgaria 13277 A 15 15
252 Bulgaria 13278 A 15 15
253 Bulgaria 13279 T 15 15
254 Bulgaria 13280 C 15 15
255 Bulgaria 13281 C 15 15
256 Bulgaria 13282 T 15 15
257 Bulgaria 13283 A 15 15
258 Bulgaria 13284 A 15 15
259 Bulgaria 13285 A 15 15
260 Bulgaria 13286 G 15 15
261 Bulgaria 13287 G 15 15
262 Bulgaria 13288 A 15 15
263 Bulgaria 13289 T 15 15
264 Bulgaria 13290 T 15 15
265 Bulgaria 13291 T 15 15
266 Bulgaria 13292 T 15 15
267 Bulgaria 13293 G 15 15
268 Bulgaria 13294 T 15 15
269 Bulgaria 13295 G 15 15
270 Bulgaria 13296 A 15 15
271 Bulgaria 13297 C 15 15
272 Bulgaria 13298 T 15 15
273 Bulgaria 13299 T 15 15
274 Bulgaria 13300 A 15 15
275 Bulgaria 13301 A 15 15
276 Bulgaria 13302 A 15 15
277 Bulgaria 13303 A 15 15
278 Bulgaria 13304 G 15 15
279 Bulgaria 13305 G 15 15
280 Bulgaria 13306 T 15 15
281 Bulgaria 13307 A 15 15
282 Bulgaria 13308 A 15 15
283 Bulgaria 13309 G 15 15
284 Bulgaria 13310 T 15 15
285 Bulgaria 13311 A 15 15
286 Bulgaria 13312 T 15 15
287 Bulgaria 13313 G 15 15
288 Bulgaria 13314 T 15 15
289 Bulgaria 13315 A 15 15
290 Bulgaria 13316 C 15 15
291 Bulgaria 13317 A 15 15
292 Bulgaria 13318 A 15 15
293 Bulgaria 13319 A 15 15
294 Bulgaria 13320 T 15 15
295 Bulgaria 13321 A 15 15
296 Bulgaria 13322 C 15 15
297 Bulgaria 13323 C 15 15
298 Bulgaria 13324 T 15 15
299 Bulgaria 13325 A 15 15
300 Bulgaria 13326 C 15 15
301 Bulgaria 13327 A 15 15
302 Bulgaria 13328 A 15 15
303 Bulgaria 13329 C 15 15
304 Bulgaria 13330 T 15 15
305 Bulgaria 13331 T 15 15
306 Bulgaria 13332 G 15 15
307 Bulgaria 13333 T 15 15
308 Bulgaria 13334 G 15 15
309 Bulgaria 13335 C 15 15
310 Bulgaria 13336 T 15 15
311 Bulgaria 13337 A 15 15
312 Bulgaria 13338 A 15 15
313 Bulgaria 13339 T 15 15
314 Bulgaria 13340 G 15 15
315 Bulgaria 13341 A 15 15
316 Bulgaria 13342 C 15 15
317 Bulgaria 13343 C 15 15
318 Bulgaria 13344 C 15 15
319 Bulgaria 13345 T 15 15
320 Bulgaria 13346 G 15 15
321 Bulgaria 13347 T 15 15
322 Bulgaria 13348 G 15 15
323 Bulgaria 13349 G 15 15
324 Bulgaria 13350 G 15 15
325 Bulgaria 13351 T 15 15
326 Bulgaria 13352 T 15 15
327 Bulgaria 13353 T 15 15
328 Bulgaria 13354 T 15 15
329 Bulgaria 13355 A 15 15
330 Bulgaria 13356 C 15 15
331 Bulgaria 13357 A 15 15
332 Bulgaria 13358 C 15 15
333 Bulgaria 13359 T 15 15
334 Bulgaria 13360 T 15 15
335 Bulgaria 13361 A 15 15
336 Bulgaria 13362 A 15 15
337 Bulgaria 13363 A 15 15
338 Bulgaria 13364 A 15 15
339 Bulgaria 13365 A 15 15
340 Bulgaria 13366 C 15 15
341 Bulgaria 13367 A 15 15
342 Bulgaria 13368 C 15 15
343 Bulgaria 13369 A 15 15
344 Bulgaria 13370 G 15 15
345 Bulgaria 13371 T 15 15
346 Bulgaria 13372 C 15 15
347 Bulgaria 13373 T 15 15
348 Bulgaria 13374 G 15 15
349 Bulgaria 13375 T 15 15
350 Bulgaria 13376 A 15 15
351 Bulgaria 13377 C 15 15
352 Bulgaria 13378 C 15 15
353 Bulgaria 13379 G 15 15
354 Bulgaria 13380 T 15 15
355 Bulgaria 13381 C 15 15
356 Bulgaria 13382 T 15 15
357 Bulgaria 13383 G 15 15
358 Bulgaria 13384 C 15 15
359 Bulgaria 13385 G 15 15
360 Bulgaria 13386 G 15 15
361 Bulgaria 13387 T 15 15
362 Bulgaria 13388 A 15 15
363 Bulgaria 13389 T 15 15
364 Bulgaria 13390 G 15 15
365 Bulgaria 13391 T 15 15
366 Bulgaria 13392 G 15 15
367 Bulgaria 13393 G 15 15
368 Bulgaria 13394 A 15 15
369 Bulgaria 13395 A 15 15
370 Bulgaria 13396 A 15 15
371 Bulgaria 13397 G 15 15
372 Bulgaria 13398 G 15 15
373 Bulgaria 13399 T 15 15
374 Bulgaria 13400 T 15 15
375 Bulgaria 13401 A 15 15
376 Bulgaria 13402 T 15 15
377 Bulgaria 13403 G 15 15
378 Bulgaria 13404 G 15 15
379 Bulgaria 13405 C 15 15
380 Bulgaria 13406 T 15 15
381 Bulgaria 13407 G 15 15
382 Bulgaria 13408 T 15 15
383 Bulgaria 13409 A 15 15
384 Bulgaria 13410 G 15 15
385 Bulgaria 13411 T 15 15
386 Bulgaria 13412 T 15 15
387 Bulgaria 13413 G 15 15
388 Bulgaria 13414 T 15 15
389 Bulgaria 13415 G 15 15
390 Bulgaria 13416 A 15 15
391 Bulgaria 13417 T 15 15
392 Bulgaria 13418 C 15 15
393 Bulgaria 13419 A 15 15
394 Bulgaria 13420 A 15 15
395 Bulgaria 13421 C 15 15
396 Bulgaria 13422 T 15 15
397 Bulgaria 13423 C 15 15
398 Bulgaria 13424 C 15 15
399 Bulgaria 13425 G 15 15
400 Bulgaria 13426 C 15 15
401 Bulgaria 13427 G 15 15
402 Bulgaria 13428 A 15 15
403 Bulgaria 13429 A 15 15
404 Bulgaria 13430 C 15 15
405 Bulgaria 13431 C 15 15
406 Bulgaria 13432 C 15 15
407 Bulgaria 13433 A 15 15
408 Bulgaria 13434 T 15 15
409 Bulgaria 13435 G 15 15
410 Bulgaria 13436 C 15 15
411 Bulgaria 13437 T 15 15
412 Bulgaria 13438 T 15 15
413 Bulgaria 13439 C 15 15
414 Bulgaria 13440 A 15 15
415 Bulgaria 13441 G 15 15