National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   416                                        
?                                            
A   38 2                             1   2    
C   39   2                           1        
D   21     3 1     1                          
E   12                                        
F   15                                        
G   39           1                            
H   9             2                          
I   12                                        
K   24                                        
L   24         1         3                    
M   12                   1               1    
N   21                                        
P   24                         1              
Q   18                           2            
R   6   1                         1          
S   18                               1        
T   39               5                 1      
V   27               1                   4    
W   3                                        
Y   15                                       1

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Belgium 13026 C 3696 3696
1 Belgium 13027 T 3696 3696
2 Belgium 13028 G 3696 3696
3 Belgium 13029 G 3696 3696
4 Belgium 13030 T 3699 3699
5 Belgium 13031 A 3699 3699
6 Belgium 13032 A 3699 3699
7 Belgium 13033 T 3699 3699
8 Belgium 13034 G T 3699 3698 Ala4257Ser
9 Belgium 13035 C T 3699 3698 Ala4257Val
10 Belgium 13036 A 3699 3699
11 Belgium 13037 A 3699 3699
12 Belgium 13038 C T 3699 3698 Thr4258Ile
13 Belgium 13039 A 3699 3699
14 Belgium 13040 G 3699 3699
15 Belgium 13041 A 3699 3699
16 Belgium 13042 A 3699 3699
17 Belgium 13043 G 3699 3699
18 Belgium 13044 T 3699 3699
19 Belgium 13045 G T 3699 3696 Val4260Val
20 Belgium 13046 C 3699 3699
21 Belgium 13047 C 3699 3699
22 Belgium 13048 T 3699 3699
23 Belgium 13049 G 3699 3699
24 Belgium 13050 C 3699 3699
25 Belgium 13051 C T 3699 3698 Ala4262Ala
26 Belgium 13052 A 3699 3699
27 Belgium 13053 A 3699 3699
28 Belgium 13054 T 3699 3699
29 Belgium 13055 T 3699 3699
30 Belgium 13056 C 3699 3699
31 Belgium 13057 A 3699 3699
32 Belgium 13058 A 3699 3699
33 Belgium 13059 C T 3699 3698 Thr4265Ile
34 Belgium 13060 T 3699 3699
35 Belgium 13061 G 3699 3699
36 Belgium 13062 T 3699 3699
37 Belgium 13063 A 3699 3699
38 Belgium 13064 T 3699 3699
39 Belgium 13065 T 3699 3699
40 Belgium 13066 A 3699 3699
41 Belgium 13067 T 3699 3699
42 Belgium 13068 C 3699 3699
43 Belgium 13069 T 3699 3699
44 Belgium 13070 T 3699 3699
45 Belgium 13071 T 3699 3699
46 Belgium 13072 C 3699 3699
47 Belgium 13073 T 3699 3699
48 Belgium 13074 G 3699 3699
49 Belgium 13075 T 3699 3699
50 Belgium 13076 G 3699 3699
51 Belgium 13077 C 3699 3699
52 Belgium 13078 T 3699 3699
53 Belgium 13079 T 3699 3699
54 Belgium 13080 T 3699 3699
55 Belgium 13081 T 3699 3699
56 Belgium 13082 G 3699 3699
57 Belgium 13083 C 3699 3699
58 Belgium 13084 T 3699 3699
59 Belgium 13085 G 3699 3699
60 Belgium 13086 T 3699 3699
61 Belgium 13087 A 3699 3699
62 Belgium 13088 G 3699 3699
63 Belgium 13089 A 3699 3699
64 Belgium 13090 T 3699 3699
65 Belgium 13091 G 3699 3699
66 Belgium 13092 C 3699 3699
67 Belgium 13093 T 3699 3699
68 Belgium 13094 G 3699 3699
69 Belgium 13095 C 3699 3699
70 Belgium 13096 T 3699 3699
71 Belgium 13097 A 3699 3699
72 Belgium 13098 A 3699 3699
73 Belgium 13099 A 3699 3699
74 Belgium 13100 G 3699 3699
75 Belgium 13101 C 3699 3699
76 Belgium 13102 T C 3699 3698 Ala4279Ala
77 Belgium 13103 T 3699 3699
78 Belgium 13104 A 3699 3699
79 Belgium 13105 C 3699 3699
80 Belgium 13106 A 3699 3699
81 Belgium 13107 A 3699 3699
82 Belgium 13108 A 3699 3699
83 Belgium 13109 G 3699 3699
84 Belgium 13110 A 3699 3699
85 Belgium 13111 T C 3699 3698 Asp4282Asp
86 Belgium 13112 T 3699 3699
87 Belgium 13113 A 3699 3699
88 Belgium 13114 T 3699 3699
89 Belgium 13115 C 3699 3699
90 Belgium 13116 T 3699 3699
91 Belgium 13117 A 3699 3699
92 Belgium 13118 G 3699 3699
93 Belgium 13119 C T 3697 3694 Ala4285Val
94 Belgium 13120 T 3697 3697
95 Belgium 13121 A 3697 3697
96 Belgium 13122 G 3697 3697
97 Belgium 13123 T 3697 3697
98 Belgium 13124 G 3697 3697
99 Belgium 13125 G 3697 3697
100 Belgium 13126 G A 3697 3696 Gly4287Gly
101 Belgium 13127 G 3697 3697
102 Belgium 13128 G 3697 3697
103 Belgium 13129 A 3697 3697
104 Belgium 13130 C 3697 3697
105 Belgium 13131 A 3697 3697
106 Belgium 13132 A G 3697 3696 Gln4289Gln
107 Belgium 13133 C 3696 3696
108 Belgium 13134 C 3696 3696
109 Belgium 13135 A 3696 3696
110 Belgium 13136 A 3696 3696
111 Belgium 13137 T 3695 3695
112 Belgium 13138 C 3695 3695
113 Belgium 13139 A 3695 3695
114 Belgium 13140 C 3695 3695
115 Belgium 13141 T 3695 3695
116 Belgium 13142 A 3695 3695
117 Belgium 13143 A 3695 3695
118 Belgium 13144 T 3695 3695
119 Belgium 13145 T 3695 3695
120 Belgium 13146 G 3695 3695
121 Belgium 13147 T 3695 3695
122 Belgium 13148 G 3695 3695
123 Belgium 13149 T 3695 3695
124 Belgium 13150 T 3695 3695
125 Belgium 13151 A 3695 3695
126 Belgium 13152 A 3695 3695
127 Belgium 13153 G 3695 3695
128 Belgium 13154 A 3695 3695
129 Belgium 13155 T 3695 3695
130 Belgium 13156 G 3695 3695
131 Belgium 13157 T 3695 3695
132 Belgium 13158 T 3695 3695
133 Belgium 13159 G 3695 3695
134 Belgium 13160 T 3695 3695
135 Belgium 13161 G 3695 3695
136 Belgium 13162 T 3695 3695
137 Belgium 13163 A 3695 3695
138 Belgium 13164 C 3695 3695
139 Belgium 13165 A 3695 3695
140 Belgium 13166 C 3695 3695
141 Belgium 13167 A 3695 3695
142 Belgium 13168 C 3695 3695
143 Belgium 13169 A 3695 3695
144 Belgium 13170 C 3695 3695
145 Belgium 13171 T 3695 3695
146 Belgium 13172 G 3695 3695
147 Belgium 13173 G 3695 3695
148 Belgium 13174 T 3695 3695
149 Belgium 13175 A 3695 3695
150 Belgium 13176 C T 3695 3692 Thr4304Ile
151 Belgium 13177 T 3695 3695
152 Belgium 13178 G 3695 3695
153 Belgium 13179 G 3695 3695
154 Belgium 13180 T 3695 3695
155 Belgium 13181 C 3695 3695
156 Belgium 13182 A 3695 3695
157 Belgium 13183 G 3695 3695
158 Belgium 13184 G 3695 3695
159 Belgium 13185 C 3695 3695
160 Belgium 13186 A 3695 3695
161 Belgium 13187 A 3695 3695
162 Belgium 13188 T 3695 3695
163 Belgium 13189 A 3695 3695
164 Belgium 13190 A 3695 3695
165 Belgium 13191 C 3695 3695
166 Belgium 13192 A 3695 3695
167 Belgium 13193 G 3695 3695
168 Belgium 13194 T 3695 3695
169 Belgium 13195 T C 3695 3694 Val4310Val
170 Belgium 13196 A 3695 3695
171 Belgium 13197 C 3695 3695
172 Belgium 13198 A 3695 3695
173 Belgium 13199 C 3695 3695
174 Belgium 13200 C 3695 3695
175 Belgium 13201 G 3695 3695
176 Belgium 13202 G 3695 3695
177 Belgium 13203 A 3695 3695
178 Belgium 13204 A 3695 3695
179 Belgium 13205 G 3695 3695
180 Belgium 13206 C 3695 3695
181 Belgium 13207 C 3695 3695
182 Belgium 13208 A 3695 3695
183 Belgium 13209 A 3695 3695
184 Belgium 13210 T 3695 3695
185 Belgium 13211 A G 3695 3694 Met4316Val
186 Belgium 13212 T 3695 3695
187 Belgium 13213 G 3695 3695
188 Belgium 13214 G 3695 3695
189 Belgium 13215 A 3695 3695
190 Belgium 13216 T G,C 3695 3693 Asp4317Glu-p.Asp4317Asp
191 Belgium 13217 C 3695 3695
192 Belgium 13218 A 3695 3695
193 Belgium 13219 A 3695 3695
194 Belgium 13220 G 3695 3695
195 Belgium 13221 A 3695 3695
196 Belgium 13222 A 3695 3695
197 Belgium 13223 T 3695 3695
198 Belgium 13224 C 3695 3695
199 Belgium 13225 C T 3695 3694 Ser4320Ser
200 Belgium 13226 T 3695 3695
201 Belgium 13227 T 3695 3695
202 Belgium 13228 T 3695 3695
203 Belgium 13229 G 3695 3695
204 Belgium 13230 G 3695 3695
205 Belgium 13231 T 3695 3695
206 Belgium 13232 G 3695 3695
207 Belgium 13233 G 3695 3695
208 Belgium 13234 T 3695 3695
209 Belgium 13235 G 3695 3695
210 Belgium 13236 C 3695 3695
211 Belgium 13237 A 3695 3695
212 Belgium 13238 T 3695 3695
213 Belgium 13239 C 3695 3695
214 Belgium 13240 G 3695 3695
215 Belgium 13241 T 3695 3695
216 Belgium 13242 G 3695 3695
217 Belgium 13243 T 3695 3695
218 Belgium 13244 T 3695 3695
219 Belgium 13245 G 3695 3695
220 Belgium 13246 T 3695 3695
221 Belgium 13247 C 3695 3695
222 Belgium 13248 T 3695 3695
223 Belgium 13249 G T 3695 3688 Leu4328Leu
224 Belgium 13250 T 3695 3695
225 Belgium 13251 A 3695 3695
226 Belgium 13252 C 3695 3695
227 Belgium 13253 T 3695 3695
228 Belgium 13254 G 3695 3695
229 Belgium 13255 C 3695 3695
230 Belgium 13256 C 3695 3695
231 Belgium 13257 G 3695 3695
232 Belgium 13258 T C 3695 3664 Arg4331Arg
233 Belgium 13259 T 3695 3695
234 Belgium 13260 G 3695 3695
235 Belgium 13261 C T 3695 3657 Cys4332Cys
236 Belgium 13262 C 3695 3695
237 Belgium 13263 A 3695 3695
238 Belgium 13264 C T 3695 3694 His4333His
239 Belgium 13265 A 3695 3695
240 Belgium 13266 T 3695 3695
241 Belgium 13267 A 3695 3695
242 Belgium 13268 G 3695 3695
243 Belgium 13269 A 3695 3695
244 Belgium 13270 T 3695 3695
245 Belgium 13271 C 3695 3695
246 Belgium 13272 A 3695 3695
247 Belgium 13273 T C 3695 3692 His4336His
248 Belgium 13274 C 3695 3695
249 Belgium 13275 C 3695 3695
250 Belgium 13276 A 3695 3695
251 Belgium 13277 A 3695 3695
252 Belgium 13278 A 3695 3695
253 Belgium 13279 T 3695 3695
254 Belgium 13280 C 3695 3695
255 Belgium 13281 C 3695 3695
256 Belgium 13282 T 3695 3695
257 Belgium 13283 A 3695 3695
258 Belgium 13284 A 3695 3695
259 Belgium 13285 A 3695 3695
260 Belgium 13286 G 3695 3695
261 Belgium 13287 G 3695 3695
262 Belgium 13288 A 3695 3695
263 Belgium 13289 T 3695 3695
264 Belgium 13290 T 3695 3695
265 Belgium 13291 T 3695 3695
266 Belgium 13292 T 3695 3695
267 Belgium 13293 G 3695 3695
268 Belgium 13294 T 3695 3695
269 Belgium 13295 G 3695 3695
270 Belgium 13296 A 3695 3695
271 Belgium 13297 C T 3695 3694 Asp4344Asp
272 Belgium 13298 T 3695 3695
273 Belgium 13299 T 3695 3695
274 Belgium 13300 A 3695 3695
275 Belgium 13301 A 3695 3695
276 Belgium 13302 A 3695 3695
277 Belgium 13303 A 3695 3695
278 Belgium 13304 G 3695 3695
279 Belgium 13305 G 3695 3695
280 Belgium 13306 T 3695 3695
281 Belgium 13307 A 3695 3695
282 Belgium 13308 A 3695 3695
283 Belgium 13309 G 3695 3695
284 Belgium 13310 T 3695 3695
285 Belgium 13311 A 3695 3695
286 Belgium 13312 T 3695 3695
287 Belgium 13313 G 3695 3695
288 Belgium 13314 T 3695 3695
289 Belgium 13315 A 3695 3695
290 Belgium 13316 C 3695 3695
291 Belgium 13317 A 3695 3695
292 Belgium 13318 A G 3695 3694 Gln4351Gln
293 Belgium 13319 A 3695 3695
294 Belgium 13320 T 3695 3695
295 Belgium 13321 A 3695 3695
296 Belgium 13322 C 3695 3695
297 Belgium 13323 C 3695 3695
298 Belgium 13324 T 3695 3695
299 Belgium 13325 A 3696 3696
300 Belgium 13326 C T 3696 3695 Thr4354Ile
301 Belgium 13327 A 3696 3696
302 Belgium 13328 A 3696 3696
303 Belgium 13329 C 3696 3696
304 Belgium 13330 T 3696 3696
305 Belgium 13331 T 3696 3696
306 Belgium 13332 G 3696 3696
307 Belgium 13333 T 3696 3696
308 Belgium 13334 G 3696 3696
309 Belgium 13335 C 3696 3695
310 Belgium 13336 T 3696 3696
311 Belgium 13337 A 3696 3696
312 Belgium 13338 A 3696 3696
313 Belgium 13339 T 3696 3696
314 Belgium 13340 G 3696 3696
315 Belgium 13341 A 3696 3696
316 Belgium 13342 C 3696 3696
317 Belgium 13343 C 3696 3696
318 Belgium 13344 C 3696 3696
319 Belgium 13345 T 3696 3696
320 Belgium 13346 G 3696 3696
321 Belgium 13347 T 3696 3696
322 Belgium 13348 G 3696 3696
323 Belgium 13349 G 3696 3696
324 Belgium 13350 G 3696 3696
325 Belgium 13351 T 3696 3696
326 Belgium 13352 T 3696 3696
327 Belgium 13353 T 3696 3696
328 Belgium 13354 T 3696 3696
329 Belgium 13355 A 3696 3696
330 Belgium 13356 C T 3696 3695 Thr4364Ile
331 Belgium 13357 A G 3696 3695 Thr4364Thr
332 Belgium 13358 C 3696 3696
333 Belgium 13359 T 3696 3696
334 Belgium 13360 T 3696 3696
335 Belgium 13361 A 3696 3696
336 Belgium 13362 A 3696 3696
337 Belgium 13363 A 3696 3696
338 Belgium 13364 A 3683 3683
339 Belgium 13365 A 3683 3683
340 Belgium 13366 C 3683 3683
341 Belgium 13367 A 3683 3683
342 Belgium 13368 C 3683 3683
343 Belgium 13369 A 3683 3683
344 Belgium 13370 G 3683 3683
345 Belgium 13371 T 3683 3683
346 Belgium 13372 C T 3683 3681 Val4369Val
347 Belgium 13373 T 3683 3683
348 Belgium 13374 G 3683 3683
349 Belgium 13375 T 3683 3683
350 Belgium 13376 A 3683 3683
351 Belgium 13377 C 3683 3683
352 Belgium 13378 C 3683 3683
353 Belgium 13379 G A 3668 3667 Val4372Ile
354 Belgium 13380 T 3668 3668
355 Belgium 13381 C T 3668 3667 Val4372Val
356 Belgium 13382 T 3668 3668
357 Belgium 13383 G 3668 3668
358 Belgium 13384 C T 3668 3667 Cys4373Cys
359 Belgium 13385 G 3668 3668
360 Belgium 13386 G 3668 3668
361 Belgium 13387 T 3668 3668
362 Belgium 13388 A C 3668 3667 Met4375Leu
363 Belgium 13389 T 3668 3668
364 Belgium 13390 G 3668 3668
365 Belgium 13391 T 3668 3668
366 Belgium 13392 G 3668 3668
367 Belgium 13393 G 3668 3668
368 Belgium 13394 A 3668 3668
369 Belgium 13395 A 3668 3668
370 Belgium 13396 A 3668 3668
371 Belgium 13397 G 3668 3668
372 Belgium 13398 G 3668 3668
373 Belgium 13399 T 3668 3668
374 Belgium 13400 T 3668 3668
375 Belgium 13401 A 3668 3668
376 Belgium 13402 T C 3668 3666 Tyr4379Tyr
377 Belgium 13403 G 3668 3668
378 Belgium 13404 G 3668 3668
379 Belgium 13405 C 3668 3668
380 Belgium 13406 T 3668 3668
381 Belgium 13407 G 3668 3668
382 Belgium 13408 T 3668 3668
383 Belgium 13409 A 3668 3668
384 Belgium 13410 G 3668 3668
385 Belgium 13411 T 3668 3668
386 Belgium 13412 T 3668 3668
387 Belgium 13413 G C 3668 3667 Cys4383Ser
388 Belgium 13414 T 3668 3668
389 Belgium 13415 G C 3668 3667 Asp4384His
390 Belgium 13416 A 3668 3668
391 Belgium 13417 T 3668 3668
392 Belgium 13418 C 3668 3668
393 Belgium 13419 A 3668 3668
394 Belgium 13420 A 3668 3668
395 Belgium 13421 C T 3668 3667 Leu4386Phe
396 Belgium 13422 T 3668 3668
397 Belgium 13423 C T,A 3668 3666 Leu4386Leu-p.Leu4386Leu
398 Belgium 13424 C T 3668 3667 Arg4387Cys
399 Belgium 13425 G 3668 3668
400 Belgium 13426 C 3668 3668
401 Belgium 13427 G 3668 3668
402 Belgium 13428 A 3668 3668
403 Belgium 13429 A 3668 3668
404 Belgium 13430 C 3668 3668
405 Belgium 13431 C 3668 3668
406 Belgium 13432 C T 3668 3667 Pro4389Pro
407 Belgium 13433 A 3668 3668
408 Belgium 13434 T 3668 3668
409 Belgium 13435 G 3668 3668
410 Belgium 13436 C 3668 3668
411 Belgium 13437 T 3668 3668
412 Belgium 13438 T 3668 3668
413 Belgium 13439 C 3667 3667
414 Belgium 13440 A 3667 3667
415 Belgium 13441 G 3667 3667