National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   416                                        
?                                            
A   38                                   1    
C   39                                        
D   21                                        
E   12                                        
F   15                                        
G   39                                        
H   9                                        
I   12                                        
K   24                                        
L   24                                        
M   12                                        
N   21                                        
P   24                                        
Q   18                                        
R   6                                        
S   18                                        
T   39                                        
V   27                                        
W   3                                        
Y   15                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Algeria 13026 C 18 18
1 Algeria 13027 T 18 18
2 Algeria 13028 G 18 18
3 Algeria 13029 G 18 18
4 Algeria 13030 T 18 18
5 Algeria 13031 A 18 18
6 Algeria 13032 A 18 18
7 Algeria 13033 T 18 18
8 Algeria 13034 G 18 18
9 Algeria 13035 C 18 18
10 Algeria 13036 A 18 18
11 Algeria 13037 A 18 18
12 Algeria 13038 C 18 18
13 Algeria 13039 A 18 18
14 Algeria 13040 G 18 18
15 Algeria 13041 A 18 18
16 Algeria 13042 A 18 18
17 Algeria 13043 G 18 18
18 Algeria 13044 T 18 18
19 Algeria 13045 G 18 18
20 Algeria 13046 C 18 18
21 Algeria 13047 C 18 18
22 Algeria 13048 T 18 18
23 Algeria 13049 G 18 18
24 Algeria 13050 C 18 18
25 Algeria 13051 C 18 18
26 Algeria 13052 A 18 18
27 Algeria 13053 A 18 18
28 Algeria 13054 T 18 18
29 Algeria 13055 T 18 18
30 Algeria 13056 C 18 18
31 Algeria 13057 A 18 18
32 Algeria 13058 A 18 18
33 Algeria 13059 C 18 18
34 Algeria 13060 T 18 18
35 Algeria 13061 G 18 18
36 Algeria 13062 T 18 18
37 Algeria 13063 A 18 18
38 Algeria 13064 T 18 18
39 Algeria 13065 T 18 18
40 Algeria 13066 A 18 18
41 Algeria 13067 T 18 18
42 Algeria 13068 C 18 18
43 Algeria 13069 T 18 18
44 Algeria 13070 T 18 18
45 Algeria 13071 T 18 18
46 Algeria 13072 C 18 18
47 Algeria 13073 T 18 18
48 Algeria 13074 G 18 18
49 Algeria 13075 T 18 18
50 Algeria 13076 G 18 18
51 Algeria 13077 C 18 18
52 Algeria 13078 T 18 18
53 Algeria 13079 T 18 18
54 Algeria 13080 T 18 18
55 Algeria 13081 T 18 18
56 Algeria 13082 G 18 18
57 Algeria 13083 C 18 18
58 Algeria 13084 T 18 18
59 Algeria 13085 G 18 18
60 Algeria 13086 T 18 18
61 Algeria 13087 A 18 18
62 Algeria 13088 G 18 18
63 Algeria 13089 A 18 18
64 Algeria 13090 T 18 18
65 Algeria 13091 G 18 18
66 Algeria 13092 C 18 18
67 Algeria 13093 T 18 18
68 Algeria 13094 G 18 18
69 Algeria 13095 C 18 18
70 Algeria 13096 T 18 18
71 Algeria 13097 A 18 18
72 Algeria 13098 A 18 18
73 Algeria 13099 A 18 18
74 Algeria 13100 G 18 18
75 Algeria 13101 C 18 18
76 Algeria 13102 T 18 18
77 Algeria 13103 T 18 18
78 Algeria 13104 A 18 18
79 Algeria 13105 C 18 18
80 Algeria 13106 A 18 18
81 Algeria 13107 A 18 18
82 Algeria 13108 A 18 18
83 Algeria 13109 G 18 18
84 Algeria 13110 A 18 18
85 Algeria 13111 T 18 18
86 Algeria 13112 T 18 18
87 Algeria 13113 A 18 18
88 Algeria 13114 T 18 18
89 Algeria 13115 C 18 18
90 Algeria 13116 T 18 18
91 Algeria 13117 A 18 18
92 Algeria 13118 G 18 18
93 Algeria 13119 C 18 18
94 Algeria 13120 T 18 18
95 Algeria 13121 A 18 18
96 Algeria 13122 G 18 18
97 Algeria 13123 T 18 18
98 Algeria 13124 G 18 18
99 Algeria 13125 G 18 18
100 Algeria 13126 G 18 18
101 Algeria 13127 G 18 18
102 Algeria 13128 G 18 18
103 Algeria 13129 A 18 18
104 Algeria 13130 C 18 18
105 Algeria 13131 A 18 18
106 Algeria 13132 A 18 18
107 Algeria 13133 C 18 18
108 Algeria 13134 C 18 18
109 Algeria 13135 A 18 18
110 Algeria 13136 A 18 18
111 Algeria 13137 T 18 18
112 Algeria 13138 C 18 18
113 Algeria 13139 A 18 18
114 Algeria 13140 C 18 18
115 Algeria 13141 T 18 18
116 Algeria 13142 A 18 18
117 Algeria 13143 A 18 18
118 Algeria 13144 T 18 18
119 Algeria 13145 T 18 18
120 Algeria 13146 G 18 18
121 Algeria 13147 T 18 18
122 Algeria 13148 G 18 18
123 Algeria 13149 T 18 18
124 Algeria 13150 T 18 18
125 Algeria 13151 A 18 18
126 Algeria 13152 A 18 18
127 Algeria 13153 G 18 18
128 Algeria 13154 A 18 18
129 Algeria 13155 T 18 18
130 Algeria 13156 G 18 18
131 Algeria 13157 T 18 18
132 Algeria 13158 T 18 18
133 Algeria 13159 G 18 18
134 Algeria 13160 T 18 18
135 Algeria 13161 G 18 18
136 Algeria 13162 T 18 18
137 Algeria 13163 A 18 18
138 Algeria 13164 C 18 18
139 Algeria 13165 A 18 18
140 Algeria 13166 C 18 18
141 Algeria 13167 A 18 18
142 Algeria 13168 C 18 18
143 Algeria 13169 A 18 18
144 Algeria 13170 C 18 18
145 Algeria 13171 T 18 18
146 Algeria 13172 G 18 18
147 Algeria 13173 G 18 18
148 Algeria 13174 T 18 18
149 Algeria 13175 A 18 18
150 Algeria 13176 C 18 18
151 Algeria 13177 T 18 18
152 Algeria 13178 G 18 18
153 Algeria 13179 G 18 18
154 Algeria 13180 T 18 18
155 Algeria 13181 C 18 18
156 Algeria 13182 A 18 18
157 Algeria 13183 G 18 18
158 Algeria 13184 G 18 18
159 Algeria 13185 C 18 18
160 Algeria 13186 A 18 18
161 Algeria 13187 A 18 18
162 Algeria 13188 T 18 18
163 Algeria 13189 A 18 18
164 Algeria 13190 A 18 18
165 Algeria 13191 C 18 18
166 Algeria 13192 A 18 18
167 Algeria 13193 G 18 18
168 Algeria 13194 T 18 18
169 Algeria 13195 T 18 18
170 Algeria 13196 A 18 18
171 Algeria 13197 C 18 18
172 Algeria 13198 A 18 18
173 Algeria 13199 C 18 18
174 Algeria 13200 C 18 18
175 Algeria 13201 G 18 18
176 Algeria 13202 G 18 18
177 Algeria 13203 A 18 18
178 Algeria 13204 A 18 18
179 Algeria 13205 G 18 18
180 Algeria 13206 C 18 18
181 Algeria 13207 C 18 18
182 Algeria 13208 A 18 18
183 Algeria 13209 A 18 18
184 Algeria 13210 T 18 18
185 Algeria 13211 A 18 18
186 Algeria 13212 T 18 18
187 Algeria 13213 G 18 18
188 Algeria 13214 G 18 18
189 Algeria 13215 A 18 18
190 Algeria 13216 T 18 18
191 Algeria 13217 C 18 18
192 Algeria 13218 A 18 18
193 Algeria 13219 A 18 18
194 Algeria 13220 G 18 18
195 Algeria 13221 A 18 18
196 Algeria 13222 A 18 18
197 Algeria 13223 T 18 18
198 Algeria 13224 C 18 18
199 Algeria 13225 C 18 18
200 Algeria 13226 T 18 18
201 Algeria 13227 T 18 18
202 Algeria 13228 T 18 18
203 Algeria 13229 G 18 18
204 Algeria 13230 G 18 18
205 Algeria 13231 T 18 18
206 Algeria 13232 G 18 18
207 Algeria 13233 G 18 18
208 Algeria 13234 T 18 18
209 Algeria 13235 G 18 18
210 Algeria 13236 C 18 18
211 Algeria 13237 A 18 18
212 Algeria 13238 T 18 18
213 Algeria 13239 C 18 18
214 Algeria 13240 G 18 18
215 Algeria 13241 T 18 18
216 Algeria 13242 G 18 18
217 Algeria 13243 T 18 18
218 Algeria 13244 T 18 18
219 Algeria 13245 G 18 18
220 Algeria 13246 T 18 18
221 Algeria 13247 C 18 18
222 Algeria 13248 T 18 18
223 Algeria 13249 G 18 18
224 Algeria 13250 T 18 18
225 Algeria 13251 A 18 18
226 Algeria 13252 C 18 18
227 Algeria 13253 T 18 18
228 Algeria 13254 G 18 18
229 Algeria 13255 C 18 18
230 Algeria 13256 C 18 18
231 Algeria 13257 G 18 18
232 Algeria 13258 T 18 18
233 Algeria 13259 T 18 18
234 Algeria 13260 G 18 18
235 Algeria 13261 C 18 18
236 Algeria 13262 C 18 18
237 Algeria 13263 A 18 18
238 Algeria 13264 C 18 18
239 Algeria 13265 A 18 18
240 Algeria 13266 T 18 18
241 Algeria 13267 A 18 18
242 Algeria 13268 G 18 18
243 Algeria 13269 A 18 18
244 Algeria 13270 T 18 18
245 Algeria 13271 C 18 18
246 Algeria 13272 A 18 18
247 Algeria 13273 T 18 18
248 Algeria 13274 C 18 18
249 Algeria 13275 C 18 18
250 Algeria 13276 A 18 18
251 Algeria 13277 A 18 18
252 Algeria 13278 A 18 18
253 Algeria 13279 T 18 18
254 Algeria 13280 C 18 18
255 Algeria 13281 C 18 18
256 Algeria 13282 T 18 18
257 Algeria 13283 A 18 18
258 Algeria 13284 A 18 18
259 Algeria 13285 A 18 18
260 Algeria 13286 G 18 18
261 Algeria 13287 G 18 18
262 Algeria 13288 A 18 18
263 Algeria 13289 T 18 18
264 Algeria 13290 T 18 18
265 Algeria 13291 T 18 18
266 Algeria 13292 T 18 18
267 Algeria 13293 G 18 18
268 Algeria 13294 T 18 18
269 Algeria 13295 G 18 18
270 Algeria 13296 A 18 18
271 Algeria 13297 C 18 18
272 Algeria 13298 T 18 18
273 Algeria 13299 T 18 18
274 Algeria 13300 A 18 18
275 Algeria 13301 A 18 18
276 Algeria 13302 A 18 18
277 Algeria 13303 A 18 18
278 Algeria 13304 G 18 18
279 Algeria 13305 G 18 18
280 Algeria 13306 T 18 18
281 Algeria 13307 A 18 18
282 Algeria 13308 A 18 18
283 Algeria 13309 G 18 18
284 Algeria 13310 T 18 18
285 Algeria 13311 A 18 18
286 Algeria 13312 T 18 18
287 Algeria 13313 G 18 18
288 Algeria 13314 T 18 18
289 Algeria 13315 A 18 18
290 Algeria 13316 C 18 18
291 Algeria 13317 A 18 18
292 Algeria 13318 A 18 18
293 Algeria 13319 A 18 18
294 Algeria 13320 T 18 18
295 Algeria 13321 A 18 18
296 Algeria 13322 C 18 18
297 Algeria 13323 C 18 18
298 Algeria 13324 T 18 18
299 Algeria 13325 A 18 18
300 Algeria 13326 C 18 18
301 Algeria 13327 A 18 18
302 Algeria 13328 A 18 18
303 Algeria 13329 C 18 18
304 Algeria 13330 T 18 18
305 Algeria 13331 T 18 18
306 Algeria 13332 G 18 18
307 Algeria 13333 T 18 18
308 Algeria 13334 G 18 18
309 Algeria 13335 C T 18 17 Ala4357Val
310 Algeria 13336 T 18 18
311 Algeria 13337 A 18 18
312 Algeria 13338 A 18 18
313 Algeria 13339 T 18 18
314 Algeria 13340 G 18 18
315 Algeria 13341 A 18 18
316 Algeria 13342 C 18 18
317 Algeria 13343 C 18 18
318 Algeria 13344 C 18 18
319 Algeria 13345 T 18 18
320 Algeria 13346 G 18 18
321 Algeria 13347 T 18 18
322 Algeria 13348 G 18 18
323 Algeria 13349 G 18 18
324 Algeria 13350 G 18 18
325 Algeria 13351 T 18 18
326 Algeria 13352 T 18 18
327 Algeria 13353 T 18 18
328 Algeria 13354 T 18 18
329 Algeria 13355 A 18 18
330 Algeria 13356 C 18 18
331 Algeria 13357 A 18 18
332 Algeria 13358 C 18 18
333 Algeria 13359 T 18 18
334 Algeria 13360 T 18 18
335 Algeria 13361 A 18 18
336 Algeria 13362 A 18 18
337 Algeria 13363 A 18 18
338 Algeria 13364 A 18 18
339 Algeria 13365 A 18 18
340 Algeria 13366 C 18 18
341 Algeria 13367 A 18 18
342 Algeria 13368 C 18 18
343 Algeria 13369 A 18 18
344 Algeria 13370 G 18 18
345 Algeria 13371 T 18 18
346 Algeria 13372 C 18 18
347 Algeria 13373 T 18 18
348 Algeria 13374 G 18 18
349 Algeria 13375 T 18 18
350 Algeria 13376 A 18 18
351 Algeria 13377 C 18 18
352 Algeria 13378 C 18 18
353 Algeria 13379 G 18 18
354 Algeria 13380 T 18 18
355 Algeria 13381 C 18 18
356 Algeria 13382 T 18 18
357 Algeria 13383 G 18 18
358 Algeria 13384 C 18 18
359 Algeria 13385 G 18 18
360 Algeria 13386 G 18 18
361 Algeria 13387 T 18 18
362 Algeria 13388 A 18 18
363 Algeria 13389 T 18 18
364 Algeria 13390 G 18 18
365 Algeria 13391 T 18 18
366 Algeria 13392 G 18 18
367 Algeria 13393 G 18 18
368 Algeria 13394 A 18 18
369 Algeria 13395 A 18 18
370 Algeria 13396 A 18 18
371 Algeria 13397 G 18 18
372 Algeria 13398 G 18 18
373 Algeria 13399 T 18 18
374 Algeria 13400 T 18 18
375 Algeria 13401 A 17 17
376 Algeria 13402 T 17 17
377 Algeria 13403 G 17 17
378 Algeria 13404 G 17 17
379 Algeria 13405 C 17 17
380 Algeria 13406 T 17 17
381 Algeria 13407 G 17 17
382 Algeria 13408 T 17 17
383 Algeria 13409 A 17 17
384 Algeria 13410 G 17 17
385 Algeria 13411 T 17 17
386 Algeria 13412 T 17 17
387 Algeria 13413 G 17 17
388 Algeria 13414 T 17 17
389 Algeria 13415 G 17 17
390 Algeria 13416 A 17 17
391 Algeria 13417 T 17 17
392 Algeria 13418 C 17 17
393 Algeria 13419 A 17 17
394 Algeria 13420 A 17 17
395 Algeria 13421 C 17 17
396 Algeria 13422 T 17 17
397 Algeria 13423 C 17 17
398 Algeria 13424 C 17 17
399 Algeria 13425 G 17 17
400 Algeria 13426 C 17 17
401 Algeria 13427 G 17 17
402 Algeria 13428 A 17 17
403 Algeria 13429 A 17 17
404 Algeria 13430 C 17 17
405 Algeria 13431 C 17 17
406 Algeria 13432 C 17 17
407 Algeria 13433 A 17 17
408 Algeria 13434 T 17 17
409 Algeria 13435 G 17 17
410 Algeria 13436 C 17 17
411 Algeria 13437 T 17 17
412 Algeria 13438 T 17 17
413 Algeria 13439 C 17 17
414 Algeria 13440 A 17 17
415 Algeria 13441 G 17 17