National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   540                                        
?                                            
A   21                               1        
C   3                                        
D   27                                        
E   54       1   1                            
F   15                                        
G   66           2                            
H   21                             1          
I   9                                        
K   27                       1                
L   63                   3                    
M   9                                        
N   18                               1        
P   24                                        
Q   21                                        
R   30   1                         1          
S   30                                        
T   21 1                                      
V   63                                   3    
W   3                                        
Y   15                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Poland 266 A 434 434
1 Poland 267 T 434 434
2 Poland 268 G 434 434
3 Poland 269 G 434 434
4 Poland 270 A 434 434
5 Poland 271 G 434 434
6 Poland 272 A 434 434
7 Poland 273 G 434 434
8 Poland 274 C 434 434
9 Poland 275 C 434 434
10 Poland 276 T 434 434
11 Poland 277 T 434 434
12 Poland 278 G 434 434
13 Poland 279 T 434 434
14 Poland 280 C 434 434
15 Poland 281 C 434 434
16 Poland 282 C 434 434
17 Poland 283 T 434 434
18 Poland 284 G 434 434
19 Poland 285 G 434 434
20 Poland 286 T 434 434
21 Poland 287 T 434 434
22 Poland 288 T 434 434
23 Poland 289 C 434 434
24 Poland 290 A 434 434
25 Poland 291 A 434 434
26 Poland 292 C 434 434
27 Poland 293 G 434 434
28 Poland 294 A 434 434
29 Poland 295 G 434 434
30 Poland 296 A 434 434
31 Poland 297 A 434 434
32 Poland 298 A 434 434
33 Poland 299 A 434 434
34 Poland 300 C 434 434
35 Poland 301 A 434 434
36 Poland 302 C 434 434
37 Poland 303 A 434 434
38 Poland 304 C 434 434
39 Poland 305 G 434 434
40 Poland 306 T 434 434
41 Poland 307 C 434 434
42 Poland 308 C 434 434
43 Poland 309 A 434 434
44 Poland 310 A 434 434
45 Poland 311 C 434 434
46 Poland 312 T 434 434
47 Poland 313 C T 434 432 Leu16Leu
48 Poland 314 A 434 434
49 Poland 315 G 434 434
50 Poland 316 T 434 434
51 Poland 317 T 434 434
52 Poland 318 T 434 434
53 Poland 319 G 434 434
54 Poland 320 C 434 434
55 Poland 321 C 434 434
56 Poland 322 T 434 434
57 Poland 323 G 434 434
58 Poland 324 T 434 434
59 Poland 325 T 434 434
60 Poland 326 T 434 434
61 Poland 327 T 434 434
62 Poland 328 A 434 434
63 Poland 329 C 434 434
64 Poland 330 A 434 434
65 Poland 331 G 434 434
66 Poland 332 G 434 434
67 Poland 333 T 434 434
68 Poland 334 T 434 434
69 Poland 335 C T 434 433 Arg24Cys
70 Poland 336 G 434 434
71 Poland 337 C T 434 426 Arg24Arg
72 Poland 338 G 434 434
73 Poland 339 A 434 434
74 Poland 340 C 434 434
75 Poland 341 G 434 434
76 Poland 342 T 434 434
77 Poland 343 G 434 434
78 Poland 344 C 434 434
79 Poland 345 T 434 434
80 Poland 346 C 434 434
81 Poland 347 G 434 434
82 Poland 348 T 434 434
83 Poland 349 A 434 434
84 Poland 350 C 434 434
85 Poland 351 G 434 434
86 Poland 352 T 434 434
87 Poland 353 G 434 434
88 Poland 354 G 434 434
89 Poland 355 C 434 434
90 Poland 356 T 434 434
91 Poland 357 T 434 434
92 Poland 358 T 434 434
93 Poland 359 G 434 434
94 Poland 360 G 434 434
95 Poland 361 A 434 434
96 Poland 362 G 434 434
97 Poland 363 A 434 434
98 Poland 364 C 434 434
99 Poland 365 T 434 434
100 Poland 366 C 434 434
101 Poland 367 C 434 434
102 Poland 368 G 434 434
103 Poland 369 T 434 434
104 Poland 370 G 434 434
105 Poland 371 G 434 434
106 Poland 372 A 434 434
107 Poland 373 G 434 434
108 Poland 374 G 434 434
109 Poland 375 A 434 434
110 Poland 376 G 434 434
111 Poland 377 G 434 434
112 Poland 378 T 434 434
113 Poland 379 C 434 434
114 Poland 380 T 434 434
115 Poland 381 T 434 434
116 Poland 382 A 434 434
117 Poland 383 T 434 434
118 Poland 384 C 434 434
119 Poland 385 A 434 434
120 Poland 386 G 434 434
121 Poland 387 A 434 434
122 Poland 388 G 434 434
123 Poland 389 G 434 434
124 Poland 390 C 434 434
125 Poland 391 A 434 434
126 Poland 392 C 434 434
127 Poland 393 G 434 434
128 Poland 394 T 434 434
129 Poland 395 C 434 434
130 Poland 396 A 434 434
131 Poland 397 A 434 434
132 Poland 398 C 434 434
133 Poland 399 A 434 434
134 Poland 400 T 434 434
135 Poland 401 C 434 434
136 Poland 402 T 434 434
137 Poland 403 T 434 434
138 Poland 404 A 434 434
139 Poland 405 A 434 434
140 Poland 406 A 434 434
141 Poland 407 G 434 434
142 Poland 408 A 434 434
143 Poland 409 T 434 434
144 Poland 410 G 434 434
145 Poland 411 G 434 434
146 Poland 412 C 434 434
147 Poland 413 A 434 434
148 Poland 414 C 434 434
149 Poland 415 T 434 434
150 Poland 416 T 434 434
151 Poland 417 G 434 434
152 Poland 418 T 434 434
153 Poland 419 G 434 434
154 Poland 420 G 434 434
155 Poland 421 C 434 434
156 Poland 422 T 434 434
157 Poland 423 T 434 434
158 Poland 424 A 434 434
159 Poland 425 G 434 434
160 Poland 426 T 434 434
161 Poland 427 A 434 434
162 Poland 428 G 434 434
163 Poland 429 A 434 434
164 Poland 430 A 434 434
165 Poland 431 G 434 434
166 Poland 432 T 434 434
167 Poland 433 T 434 434
168 Poland 434 G 434 434
169 Poland 435 A G 434 433 Glu57Gly
170 Poland 436 A 434 434
171 Poland 437 A 434 434
172 Poland 438 A 434 434
173 Poland 439 A 434 434
174 Poland 440 G 434 434
175 Poland 441 G 434 434
176 Poland 442 C 434 434
177 Poland 443 G 434 434
178 Poland 444 T 434 434
179 Poland 445 T C 434 422 Val60Val
180 Poland 446 T 434 434
181 Poland 447 T 434 434
182 Poland 448 G 434 434
183 Poland 449 C 434 434
184 Poland 450 C 434 434
185 Poland 451 T 434 434
186 Poland 452 C 434 434
187 Poland 453 A 434 434
188 Poland 454 A 434 434
189 Poland 455 C 434 434
190 Poland 456 T 434 434
191 Poland 457 T 434 434
192 Poland 458 G 434 434
193 Poland 459 A 434 434
194 Poland 460 A 434 434
195 Poland 461 C 434 434
196 Poland 462 A 434 434
197 Poland 463 G 434 434
198 Poland 464 C 434 434
199 Poland 465 C 434 434
200 Poland 466 C 434 434
201 Poland 467 T 434 434
202 Poland 468 A 434 434
203 Poland 469 T 434 434
204 Poland 470 G 434 434
205 Poland 471 T 434 434
206 Poland 472 G 434 434
207 Poland 473 T 434 434
208 Poland 474 T 434 434
209 Poland 475 C 434 434
210 Poland 476 A 434 434
211 Poland 477 T 434 434
212 Poland 478 C 434 434
213 Poland 479 A 434 434
214 Poland 480 A 434 434
215 Poland 481 A 434 434
216 Poland 482 C 434 434
217 Poland 483 G 434 434
218 Poland 484 T 434 434
219 Poland 485 T 434 434
220 Poland 486 C 434 434
221 Poland 487 G 434 434
222 Poland 488 G 434 434
223 Poland 489 A 434 434
224 Poland 490 T 434 434
225 Poland 491 G 434 434
226 Poland 492 C 434 434
227 Poland 493 T 434 434
228 Poland 494 C 434 434
229 Poland 495 G 434 434
230 Poland 496 A 434 434
231 Poland 497 A 434 434
232 Poland 498 C 434 434
233 Poland 499 T 434 434
234 Poland 500 G 434 434
235 Poland 501 C 434 434
236 Poland 502 A 434 434
237 Poland 503 C 434 434
238 Poland 504 C 434 434
239 Poland 505 T 433 433
240 Poland 506 C 433 433
241 Poland 507 A 433 433
242 Poland 508 T 433 433
243 Poland 509 G 433 433
244 Poland 510 G 433 433
245 Poland 511 T C 433 432 Gly82Gly
246 Poland 512 C 433 433
247 Poland 513 A G 433 432 His83Arg
248 Poland 514 T 433 433
249 Poland 515 G 433 433
250 Poland 516 T 433 433
251 Poland 517 T 433 433
252 Poland 518 A 433 433
253 Poland 519 T 433 433
254 Poland 520 G 433 433
255 Poland 521 G 433 433
256 Poland 522 T 433 433
257 Poland 523 T 433 433
258 Poland 524 G 433 433
259 Poland 525 A 433 433
260 Poland 526 G 433 433
261 Poland 527 C 433 433
262 Poland 528 T 433 433
263 Poland 529 G T 433 432 Leu88Leu
264 Poland 530 G 433 433
265 Poland 531 T 433 433
266 Poland 532 A 433 433
267 Poland 533 G 433 433
268 Poland 534 C 433 433
269 Poland 535 A 433 433
270 Poland 536 G 433 433
271 Poland 537 A 433 433
272 Poland 538 A 433 433
273 Poland 539 C 433 433
274 Poland 540 T 433 433
275 Poland 541 C T 433 430 Leu92Leu
276 Poland 542 G 433 433
277 Poland 543 A 433 433
278 Poland 544 A G 433 404 Glu93Glu
279 Poland 545 G 433 433
280 Poland 546 G 433 433
281 Poland 547 C 433 433
282 Poland 548 A 433 433
283 Poland 549 T 433 433
284 Poland 550 T 433 433
285 Poland 551 C 433 433
286 Poland 552 A 433 433
287 Poland 553 G 433 433
288 Poland 554 T 433 433
289 Poland 555 A 433 433
290 Poland 556 C 433 433
291 Poland 557 G 433 433
292 Poland 558 G 433 433
293 Poland 559 T 433 433
294 Poland 560 C 433 433
295 Poland 561 G 433 433
296 Poland 562 T 433 433
297 Poland 563 A 433 433
298 Poland 564 G 433 433
299 Poland 565 T 434 434
300 Poland 566 G 434 434
301 Poland 567 G 434 434
302 Poland 568 T 434 434
303 Poland 569 G 434 434
304 Poland 570 A 434 434
305 Poland 571 G 434 434
306 Poland 572 A 434 434
307 Poland 573 C 434 434
308 Poland 574 A 434 434
309 Poland 575 C 434 434
310 Poland 576 T 434 434
311 Poland 577 T 434 434
312 Poland 578 G 434 434
313 Poland 579 G 434 434
314 Poland 580 T 434 434
315 Poland 581 G 434 434
316 Poland 582 T 434 434
317 Poland 583 C T 434 433 Val106Val
318 Poland 584 C 434 434
319 Poland 585 T 434 434
320 Poland 586 T 434 434
321 Poland 587 G 434 434
322 Poland 588 T 434 434
323 Poland 589 C 434 434
324 Poland 590 C 434 434
325 Poland 591 C 434 434
326 Poland 592 T 434 434
327 Poland 593 C 434 434
328 Poland 594 A 434 434
329 Poland 595 T 434 434
330 Poland 596 G 434 434
331 Poland 597 T 434 434
332 Poland 598 G 434 434
333 Poland 599 G 434 434
334 Poland 600 G 434 434
335 Poland 601 C 434 434
336 Poland 602 G 434 434
337 Poland 603 A 434 434
338 Poland 604 A 434 434
339 Poland 605 A 434 434
340 Poland 606 T 434 434
341 Poland 607 A 434 434
342 Poland 608 C 434 434
343 Poland 609 C 434 434
344 Poland 610 A 434 434
345 Poland 611 G 434 434
346 Poland 612 T 434 434
347 Poland 613 G 434 434
348 Poland 614 G T 434 430 Ala117Ser
349 Poland 615 C 434 434
350 Poland 616 T 434 434
351 Poland 617 T 434 434
352 Poland 618 A 434 434
353 Poland 619 C 434 434
354 Poland 620 C 434 434
355 Poland 621 G 434 434
356 Poland 622 C 434 434
357 Poland 623 A 434 434
358 Poland 624 A 434 434
359 Poland 625 G T 434 433 Lys120Asn
360 Poland 626 G 434 434
361 Poland 627 T 434 434
362 Poland 628 T 434 434
363 Poland 629 C 434 434
364 Poland 630 T 434 434
365 Poland 631 T 434 434
366 Poland 632 C 434 434
367 Poland 633 T 434 434
368 Poland 634 T 434 434
369 Poland 635 C 434 433
370 Poland 636 G 434 434
371 Poland 637 T 434 434
372 Poland 638 A 434 434
373 Poland 639 A 434 434
374 Poland 640 G 434 434
375 Poland 641 A 434 434
376 Poland 642 A G 434 426 Asn126Ser
377 Poland 643 C 434 434
378 Poland 644 G 434 434
379 Poland 645 G 434 434
380 Poland 646 T 434 434
381 Poland 647 A 434 434
382 Poland 648 A 434 434
383 Poland 649 T 434 434
384 Poland 650 A 434 434
385 Poland 651 A 434 434
386 Poland 652 A 434 434
387 Poland 653 G 434 434
388 Poland 654 G 434 434
389 Poland 655 A 434 434
390 Poland 656 G 434 434
391 Poland 657 C 434 434
392 Poland 658 T 434 434
393 Poland 659 G 434 434
394 Poland 660 G 434 434
395 Poland 661 T 434 434
396 Poland 662 G 434 434
397 Poland 663 G 434 434
398 Poland 664 C 434 434
399 Poland 665 C 434 434
400 Poland 666 A 434 434
401 Poland 667 T 434 434
402 Poland 668 A 434 434
403 Poland 669 G 434 434
404 Poland 670 T 434 434
405 Poland 671 T 434 434
406 Poland 672 A 434 434
407 Poland 673 C 434 434
408 Poland 674 G 434 434
409 Poland 675 G 434 434
410 Poland 676 C 434 434
411 Poland 677 G 434 434
412 Poland 678 C 434 434
413 Poland 679 C 434 434
414 Poland 680 G 434 434
415 Poland 681 A 434 434
416 Poland 682 T 434 434
417 Poland 683 C 434 434
418 Poland 684 T 434 434
419 Poland 685 A 434 434
420 Poland 686 A 434 434
421 Poland 687 A 434 434
422 Poland 688 G 434 434
423 Poland 689 T 434 434
424 Poland 690 C 434 434
425 Poland 691 A 434 434
426 Poland 692 T 434 434
427 Poland 693 T 434 434
428 Poland 694 T 434 434
429 Poland 695 G 434 434
430 Poland 696 A 434 434
431 Poland 697 C 434 434
432 Poland 698 T 434 434
433 Poland 699 T 434 434
434 Poland 700 A 434 434
435 Poland 701 G 434 434
436 Poland 702 G 434 434
437 Poland 703 C 434 434
438 Poland 704 G 434 434
439 Poland 705 A 434 434
440 Poland 706 C 434 434
441 Poland 707 G 434 434
442 Poland 708 A 434 434
443 Poland 709 G 434 434
444 Poland 710 C 434 434
445 Poland 711 T 434 434
446 Poland 712 T 434 434
447 Poland 713 G 434 434
448 Poland 714 G 434 434
449 Poland 715 C 434 434
450 Poland 716 A 434 434
451 Poland 717 C 434 434
452 Poland 718 T 434 434
453 Poland 719 G 434 434
454 Poland 720 A 434 434
455 Poland 721 T 434 434
456 Poland 722 C 434 434
457 Poland 723 C 434 434
458 Poland 724 T 434 434
459 Poland 725 T 434 434
460 Poland 726 A 434 434
461 Poland 727 T 434 434
462 Poland 728 G 434 434
463 Poland 729 A 434 434
464 Poland 730 A 434 434
465 Poland 731 G 434 434
466 Poland 732 A 434 434
467 Poland 733 T 434 434
468 Poland 734 T 434 434
469 Poland 735 T 434 434
470 Poland 736 T 434 434
471 Poland 737 C 434 434
472 Poland 738 A 434 434
473 Poland 739 A 434 434
474 Poland 740 G 434 434
475 Poland 741 A 434 434
476 Poland 742 A 434 434
477 Poland 743 A 434 434
478 Poland 744 A 434 434
479 Poland 745 C 434 434
480 Poland 746 T 434 434
481 Poland 747 G 434 434
482 Poland 748 G 434 434
483 Poland 749 A 434 434
484 Poland 750 A 434 434
485 Poland 751 C 434 434
486 Poland 752 A 434 434
487 Poland 753 C 434 434
488 Poland 754 T 434 434
489 Poland 755 A 434 434
490 Poland 756 A 434 434
491 Poland 757 A 434 434
492 Poland 758 C 434 434
493 Poland 759 A 434 434
494 Poland 760 T 434 434
495 Poland 761 A 434 434
496 Poland 762 G 434 434
497 Poland 763 C 434 434
498 Poland 764 A 434 434
499 Poland 765 G 434 434
500 Poland 766 T 434 434
501 Poland 767 G 434 434
502 Poland 768 G 434 434
503 Poland 769 T 434 434
504 Poland 770 G 434 434
505 Poland 771 T 434 434
506 Poland 772 T C 434 408 Val169Val
507 Poland 773 A G 434 433 Thr170Ala
508 Poland 774 C 434 434
509 Poland 775 C 434 434
510 Poland 776 C 434 434
511 Poland 777 G 434 434
512 Poland 778 T 434 434
513 Poland 779 G 434 434
514 Poland 780 A 434 434
515 Poland 781 A 434 434
516 Poland 782 C 434 434
517 Poland 783 T 434 434
518 Poland 784 C 434 434
519 Poland 785 A 434 434
520 Poland 786 T 434 434
521 Poland 787 G 434 434
522 Poland 788 C 434 434
523 Poland 789 G 434 434
524 Poland 790 T 434 434
525 Poland 791 G 434 434
526 Poland 792 A 434 434
527 Poland 793 G 434 434
528 Poland 794 C 434 434
529 Poland 795 T 434 434
530 Poland 796 T 434 434
531 Poland 797 A 434 434
532 Poland 798 A 434 434
533 Poland 799 C 434 434
534 Poland 800 G 434 434
535 Poland 801 G 434 434
536 Poland 802 A C 434 433 Gly179Gly
537 Poland 803 G 434 434
538 Poland 804 G 434 434
539 Poland 805 G 432 432