National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   540                                        
?                                            
A   21                                 1      
C   3                                        
D   27                                        
E   54                                        
F   15                                        
G   66                                        
H   21                                        
I   9                                        
K   27                                        
L   63                                        
M   9                                        
N   18                                        
P   24                                        
Q   21                                        
R   30                                        
S   30                                        
T   21                                        
V   63                                        
W   3                                        
Y   15                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Philippines 266 A 33 33
1 Philippines 267 T 33 33
2 Philippines 268 G 33 33
3 Philippines 269 G 33 33
4 Philippines 270 A 33 33
5 Philippines 271 G 33 33
6 Philippines 272 A 33 33
7 Philippines 273 G 33 33
8 Philippines 274 C 33 33
9 Philippines 275 C 33 33
10 Philippines 276 T 33 33
11 Philippines 277 T 33 33
12 Philippines 278 G 33 33
13 Philippines 279 T 33 33
14 Philippines 280 C 33 33
15 Philippines 281 C 33 33
16 Philippines 282 C 33 33
17 Philippines 283 T 33 33
18 Philippines 284 G 33 33
19 Philippines 285 G 33 33
20 Philippines 286 T 33 33
21 Philippines 287 T 33 33
22 Philippines 288 T 33 33
23 Philippines 289 C 33 33
24 Philippines 290 A 33 33
25 Philippines 291 A 33 33
26 Philippines 292 C 33 33
27 Philippines 293 G 33 33
28 Philippines 294 A 33 33
29 Philippines 295 G 33 33
30 Philippines 296 A 33 33
31 Philippines 297 A 33 33
32 Philippines 298 A 33 33
33 Philippines 299 A 33 33
34 Philippines 300 C 33 33
35 Philippines 301 A 33 33
36 Philippines 302 C 33 33
37 Philippines 303 A 33 33
38 Philippines 304 C 33 33
39 Philippines 305 G 33 33
40 Philippines 306 T 33 33
41 Philippines 307 C 33 33
42 Philippines 308 C 33 33
43 Philippines 309 A 33 32
44 Philippines 310 A 33 32
45 Philippines 311 C 33 32
46 Philippines 312 T 33 32
47 Philippines 313 C 33 32
48 Philippines 314 A 33 32
49 Philippines 315 G 33 32
50 Philippines 316 T 33 32
51 Philippines 317 T 33 32
52 Philippines 318 T 33 32
53 Philippines 319 G 33 32
54 Philippines 320 C 33 32
55 Philippines 321 C 33 33
56 Philippines 322 T 33 33
57 Philippines 323 G 33 33
58 Philippines 324 T 33 33
59 Philippines 325 T 33 33
60 Philippines 326 T 33 33
61 Philippines 327 T 33 33
62 Philippines 328 A 33 33
63 Philippines 329 C 33 33
64 Philippines 330 A 33 33
65 Philippines 331 G 33 33
66 Philippines 332 G 33 33
67 Philippines 333 T 33 33
68 Philippines 334 T 33 33
69 Philippines 335 C 33 33
70 Philippines 336 G 33 33
71 Philippines 337 C 33 33
72 Philippines 338 G 33 33
73 Philippines 339 A 33 33
74 Philippines 340 C 33 33
75 Philippines 341 G 33 33
76 Philippines 342 T 33 33
77 Philippines 343 G 33 33
78 Philippines 344 C 33 33
79 Philippines 345 T 33 33
80 Philippines 346 C 33 33
81 Philippines 347 G 33 33
82 Philippines 348 T 33 33
83 Philippines 349 A 33 33
84 Philippines 350 C 33 33
85 Philippines 351 G 33 33
86 Philippines 352 T 33 33
87 Philippines 353 G 33 33
88 Philippines 354 G 33 33
89 Philippines 355 C 33 33
90 Philippines 356 T 33 33
91 Philippines 357 T 33 33
92 Philippines 358 T 33 33
93 Philippines 359 G 33 33
94 Philippines 360 G 33 33
95 Philippines 361 A 33 33
96 Philippines 362 G 33 33
97 Philippines 363 A 33 33
98 Philippines 364 C 33 33
99 Philippines 365 T 33 33
100 Philippines 366 C 33 33
101 Philippines 367 C 33 33
102 Philippines 368 G 33 33
103 Philippines 369 T 33 33
104 Philippines 370 G 33 33
105 Philippines 371 G 33 33
106 Philippines 372 A 33 33
107 Philippines 373 G 33 33
108 Philippines 374 G 33 33
109 Philippines 375 A 33 33
110 Philippines 376 G 33 33
111 Philippines 377 G 33 33
112 Philippines 378 T 33 33
113 Philippines 379 C 33 33
114 Philippines 380 T 33 33
115 Philippines 381 T 33 33
116 Philippines 382 A 33 33
117 Philippines 383 T 33 33
118 Philippines 384 C 33 33
119 Philippines 385 A 33 33
120 Philippines 386 G 32 32
121 Philippines 387 A 32 32
122 Philippines 388 G 32 32
123 Philippines 389 G 32 32
124 Philippines 390 C 32 32
125 Philippines 391 A 32 32
126 Philippines 392 C 32 32
127 Philippines 393 G 32 32
128 Philippines 394 T 32 32
129 Philippines 395 C 32 32
130 Philippines 396 A 32 32
131 Philippines 397 A 32 32
132 Philippines 398 C 32 32
133 Philippines 399 A 32 32
134 Philippines 400 T 32 32
135 Philippines 401 C 32 32
136 Philippines 402 T 32 32
137 Philippines 403 T 32 32
138 Philippines 404 A 32 32
139 Philippines 405 A 32 32
140 Philippines 406 A 32 32
141 Philippines 407 G 32 32
142 Philippines 408 A 32 32
143 Philippines 409 T 32 32
144 Philippines 410 G 32 32
145 Philippines 411 G 32 32
146 Philippines 412 C 32 32
147 Philippines 413 A 32 32
148 Philippines 414 C 32 32
149 Philippines 415 T 32 32
150 Philippines 416 T 32 32
151 Philippines 417 G 32 32
152 Philippines 418 T 32 32
153 Philippines 419 G 32 32
154 Philippines 420 G 32 32
155 Philippines 421 C 32 32
156 Philippines 422 T 32 32
157 Philippines 423 T 32 32
158 Philippines 424 A 32 32
159 Philippines 425 G 32 32
160 Philippines 426 T 32 32
161 Philippines 427 A 32 32
162 Philippines 428 G 32 32
163 Philippines 429 A 32 32
164 Philippines 430 A 32 32
165 Philippines 431 G 32 32
166 Philippines 432 T 32 32
167 Philippines 433 T 32 32
168 Philippines 434 G 32 32
169 Philippines 435 A 32 32
170 Philippines 436 A 32 32
171 Philippines 437 A 32 32
172 Philippines 438 A 32 32
173 Philippines 439 A 32 32
174 Philippines 440 G 32 32
175 Philippines 441 G 32 32
176 Philippines 442 C 32 32
177 Philippines 443 G 32 32
178 Philippines 444 T 32 32
179 Philippines 445 T 32 32
180 Philippines 446 T 32 32
181 Philippines 447 T 32 32
182 Philippines 448 G 32 32
183 Philippines 449 C 32 32
184 Philippines 450 C 32 32
185 Philippines 451 T 32 32
186 Philippines 452 C 32 32
187 Philippines 453 A 32 32
188 Philippines 454 A 32 32
189 Philippines 455 C 32 32
190 Philippines 456 T 32 32
191 Philippines 457 T 32 32
192 Philippines 458 G 32 32
193 Philippines 459 A 32 32
194 Philippines 460 A 32 32
195 Philippines 461 C 32 32
196 Philippines 462 A 32 32
197 Philippines 463 G 32 32
198 Philippines 464 C 32 32
199 Philippines 465 C 32 32
200 Philippines 466 C 32 32
201 Philippines 467 T 32 32
202 Philippines 468 A 32 32
203 Philippines 469 T 32 32
204 Philippines 470 G 32 32
205 Philippines 471 T 32 32
206 Philippines 472 G 32 32
207 Philippines 473 T 32 32
208 Philippines 474 T 32 32
209 Philippines 475 C 32 32
210 Philippines 476 A 32 32
211 Philippines 477 T 32 32
212 Philippines 478 C 32 32
213 Philippines 479 A 32 32
214 Philippines 480 A 32 32
215 Philippines 481 A 32 32
216 Philippines 482 C 32 32
217 Philippines 483 G 32 32
218 Philippines 484 T 32 32
219 Philippines 485 T 32 32
220 Philippines 486 C 32 32
221 Philippines 487 G 32 32
222 Philippines 488 G 32 32
223 Philippines 489 A 32 32
224 Philippines 490 T 32 32
225 Philippines 491 G 32 32
226 Philippines 492 C 32 32
227 Philippines 493 T 32 32
228 Philippines 494 C 32 32
229 Philippines 495 G 32 32
230 Philippines 496 A 32 32
231 Philippines 497 A 32 32
232 Philippines 498 C 32 32
233 Philippines 499 T 32 32
234 Philippines 500 G 32 32
235 Philippines 501 C 32 32
236 Philippines 502 A 32 32
237 Philippines 503 C 32 32
238 Philippines 504 C 32 32
239 Philippines 505 T 32 32
240 Philippines 506 C 32 32
241 Philippines 507 A 32 32
242 Philippines 508 T 32 32
243 Philippines 509 G 32 32
244 Philippines 510 G 32 32
245 Philippines 511 T 32 32
246 Philippines 512 C 32 32
247 Philippines 513 A 32 32
248 Philippines 514 T 32 32
249 Philippines 515 G 32 32
250 Philippines 516 T 32 32
251 Philippines 517 T 32 32
252 Philippines 518 A 32 32
253 Philippines 519 T 32 32
254 Philippines 520 G 32 32
255 Philippines 521 G 32 32
256 Philippines 522 T 32 32
257 Philippines 523 T 32 32
258 Philippines 524 G 32 32
259 Philippines 525 A 32 32
260 Philippines 526 G 32 32
261 Philippines 527 C 32 32
262 Philippines 528 T 32 32
263 Philippines 529 G 32 32
264 Philippines 530 G 32 32
265 Philippines 531 T 32 32
266 Philippines 532 A 32 32
267 Philippines 533 G 32 32
268 Philippines 534 C 32 32
269 Philippines 535 A 32 32
270 Philippines 536 G 32 32
271 Philippines 537 A 32 32
272 Philippines 538 A 32 32
273 Philippines 539 C 32 32
274 Philippines 540 T 32 32
275 Philippines 541 C 32 32
276 Philippines 542 G 32 32
277 Philippines 543 A 32 32
278 Philippines 544 A 32 32
279 Philippines 545 G 32 32
280 Philippines 546 G 32 32
281 Philippines 547 C 32 32
282 Philippines 548 A 32 32
283 Philippines 549 T 32 32
284 Philippines 550 T 32 32
285 Philippines 551 C 32 32
286 Philippines 552 A 32 32
287 Philippines 553 G 32 32
288 Philippines 554 T 32 32
289 Philippines 555 A 32 32
290 Philippines 556 C 32 32
291 Philippines 557 G 32 32
292 Philippines 558 G 32 32
293 Philippines 559 T 32 32
294 Philippines 560 C 32 32
295 Philippines 561 G 32 32
296 Philippines 562 T 32 32
297 Philippines 563 A 32 32
298 Philippines 564 G 32 32
299 Philippines 565 T 32 32
300 Philippines 566 G 32 32
301 Philippines 567 G 32 32
302 Philippines 568 T 32 32
303 Philippines 569 G 32 32
304 Philippines 570 A 32 32
305 Philippines 571 G 32 32
306 Philippines 572 A 32 32
307 Philippines 573 C 32 32
308 Philippines 574 A 32 32
309 Philippines 575 C 32 32
310 Philippines 576 T 32 32
311 Philippines 577 T 32 32
312 Philippines 578 G 32 32
313 Philippines 579 G 32 32
314 Philippines 580 T 32 32
315 Philippines 581 G 32 32
316 Philippines 582 T 32 32
317 Philippines 583 C 32 32
318 Philippines 584 C 32 32
319 Philippines 585 T 32 32
320 Philippines 586 T 32 32
321 Philippines 587 G 32 32
322 Philippines 588 T 32 32
323 Philippines 589 C 32 32
324 Philippines 590 C 32 32
325 Philippines 591 C 32 32
326 Philippines 592 T 32 32
327 Philippines 593 C 32 32
328 Philippines 594 A 32 32
329 Philippines 595 T 32 32
330 Philippines 596 G 32 32
331 Philippines 597 T 32 32
332 Philippines 598 G 32 32
333 Philippines 599 G 32 32
334 Philippines 600 G 32 32
335 Philippines 601 C 32 32
336 Philippines 602 G 32 32
337 Philippines 603 A 32 32
338 Philippines 604 A 32 32
339 Philippines 605 A 32 32
340 Philippines 606 T 32 32
341 Philippines 607 A 32 32
342 Philippines 608 C 32 32
343 Philippines 609 C 32 32
344 Philippines 610 A 32 32
345 Philippines 611 G 32 32
346 Philippines 612 T 32 32
347 Philippines 613 G 32 32
348 Philippines 614 G 32 32
349 Philippines 615 C 32 32
350 Philippines 616 T 32 32
351 Philippines 617 T 32 32
352 Philippines 618 A 32 32
353 Philippines 619 C 32 32
354 Philippines 620 C 32 32
355 Philippines 621 G 32 32
356 Philippines 622 C 32 32
357 Philippines 623 A 32 32
358 Philippines 624 A 32 32
359 Philippines 625 G 32 32
360 Philippines 626 G 32 32
361 Philippines 627 T 32 32
362 Philippines 628 T 32 32
363 Philippines 629 C 32 32
364 Philippines 630 T 32 32
365 Philippines 631 T 32 32
366 Philippines 632 C 32 32
367 Philippines 633 T 32 32
368 Philippines 634 T 32 32
369 Philippines 635 C 32 32
370 Philippines 636 G 32 32
371 Philippines 637 T 32 32
372 Philippines 638 A 32 32
373 Philippines 639 A 32 32
374 Philippines 640 G 32 32
375 Philippines 641 A 32 32
376 Philippines 642 A 32 32
377 Philippines 643 C 32 32
378 Philippines 644 G 32 32
379 Philippines 645 G 32 32
380 Philippines 646 T 32 32
381 Philippines 647 A 32 32
382 Philippines 648 A 32 32
383 Philippines 649 T 32 32
384 Philippines 650 A 32 32
385 Philippines 651 A 32 32
386 Philippines 652 A 32 32
387 Philippines 653 G 32 32
388 Philippines 654 G 32 32
389 Philippines 655 A 32 32
390 Philippines 656 G A 32 31 Ala131Thr
391 Philippines 657 C 32 32
392 Philippines 658 T 32 32
393 Philippines 659 G 32 32
394 Philippines 660 G 32 32
395 Philippines 661 T 32 32
396 Philippines 662 G 32 32
397 Philippines 663 G 32 32
398 Philippines 664 C 32 32
399 Philippines 665 C 36 36
400 Philippines 666 A 36 36
401 Philippines 667 T 36 36
402 Philippines 668 A 36 36
403 Philippines 669 G 36 36
404 Philippines 670 T 36 36
405 Philippines 671 T 36 36
406 Philippines 672 A 36 36
407 Philippines 673 C 36 36
408 Philippines 674 G 36 36
409 Philippines 675 G 36 36
410 Philippines 676 C 36 36
411 Philippines 677 G 36 36
412 Philippines 678 C 36 36
413 Philippines 679 C 36 36
414 Philippines 680 G 36 36
415 Philippines 681 A 36 36
416 Philippines 682 T 36 36
417 Philippines 683 C 36 36
418 Philippines 684 T 36 36
419 Philippines 685 A 36 36
420 Philippines 686 A 36 36
421 Philippines 687 A 36 36
422 Philippines 688 G 36 36
423 Philippines 689 T 36 36
424 Philippines 690 C 36 36
425 Philippines 691 A 36 36
426 Philippines 692 T 36 36
427 Philippines 693 T 36 36
428 Philippines 694 T 36 36
429 Philippines 695 G 36 36
430 Philippines 696 A 36 36
431 Philippines 697 C 36 36
432 Philippines 698 T 36 36
433 Philippines 699 T 36 36
434 Philippines 700 A 36 36
435 Philippines 701 G 36 36
436 Philippines 702 G 36 36
437 Philippines 703 C 36 36
438 Philippines 704 G 36 36
439 Philippines 705 A 36 36
440 Philippines 706 C 36 36
441 Philippines 707 G 36 36
442 Philippines 708 A 36 36
443 Philippines 709 G 36 36
444 Philippines 710 C 36 36
445 Philippines 711 T 36 36
446 Philippines 712 T 36 36
447 Philippines 713 G 36 36
448 Philippines 714 G 36 36
449 Philippines 715 C 36 36
450 Philippines 716 A 36 36
451 Philippines 717 C 36 36
452 Philippines 718 T 36 36
453 Philippines 719 G 36 36
454 Philippines 720 A 36 36
455 Philippines 721 T 36 36
456 Philippines 722 C 36 36
457 Philippines 723 C 36 36
458 Philippines 724 T 36 36
459 Philippines 725 T 36 36
460 Philippines 726 A 36 36
461 Philippines 727 T 36 36
462 Philippines 728 G 36 36
463 Philippines 729 A 36 36
464 Philippines 730 A 36 36
465 Philippines 731 G 36 36
466 Philippines 732 A 36 36
467 Philippines 733 T 36 36
468 Philippines 734 T 36 36
469 Philippines 735 T 36 36
470 Philippines 736 T 36 36
471 Philippines 737 C 36 36
472 Philippines 738 A 36 36
473 Philippines 739 A 36 36
474 Philippines 740 G 36 36
475 Philippines 741 A 36 36
476 Philippines 742 A 36 36
477 Philippines 743 A 36 36
478 Philippines 744 A 36 36
479 Philippines 745 C 36 36
480 Philippines 746 T 36 36
481 Philippines 747 G 36 36
482 Philippines 748 G 36 36
483 Philippines 749 A 36 36
484 Philippines 750 A 36 36
485 Philippines 751 C 36 36
486 Philippines 752 A 36 36
487 Philippines 753 C 36 36
488 Philippines 754 T 36 36
489 Philippines 755 A 36 36
490 Philippines 756 A 36 36
491 Philippines 757 A 36 36
492 Philippines 758 C 36 36
493 Philippines 759 A 36 36
494 Philippines 760 T 36 36
495 Philippines 761 A 36 36
496 Philippines 762 G 36 36
497 Philippines 763 C 36 36
498 Philippines 764 A 36 36
499 Philippines 765 G 36 36
500 Philippines 766 T 36 36
501 Philippines 767 G 36 36
502 Philippines 768 G 36 36
503 Philippines 769 T 36 36
504 Philippines 770 G 36 36
505 Philippines 771 T 36 36
506 Philippines 772 T 36 36
507 Philippines 773 A 36 36
508 Philippines 774 C 36 36
509 Philippines 775 C 36 36
510 Philippines 776 C 36 36
511 Philippines 777 G 36 36
512 Philippines 778 T 36 36
513 Philippines 779 G 36 36
514 Philippines 780 A 36 36
515 Philippines 781 A 36 36
516 Philippines 782 C 36 36
517 Philippines 783 T 36 36
518 Philippines 784 C 36 36
519 Philippines 785 A 36 36
520 Philippines 786 T 36 36
521 Philippines 787 G 36 36
522 Philippines 788 C 36 36
523 Philippines 789 G 36 36
524 Philippines 790 T 36 36
525 Philippines 791 G 36 36
526 Philippines 792 A 36 36
527 Philippines 793 G 36 36
528 Philippines 794 C 36 36
529 Philippines 795 T 36 36
530 Philippines 796 T 36 36
531 Philippines 797 A 36 36
532 Philippines 798 A 36 36
533 Philippines 799 C 36 36
534 Philippines 800 G 36 36
535 Philippines 801 G 36 36
536 Philippines 802 A 36 36
537 Philippines 803 G 36 36
538 Philippines 804 G 36 36
539 Philippines 805 G 36 36