National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   540                                        
?                                            
A   21                                        
C   3                                        
D   27                                        
E   54     1                                  
F   15                                        
G   66     1                                  
H   21                                        
I   9                                        
K   27                                        
L   63                   1                    
M   9                                        
N   18                                        
P   24                                        
Q   21                                        
R   30                                        
S   30                                        
T   21                                        
V   63                                        
W   3                                        
Y   15                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Myanmar 266 A 41 41
1 Myanmar 267 T 41 41
2 Myanmar 268 G 41 41
3 Myanmar 269 G 41 41
4 Myanmar 270 A 41 41
5 Myanmar 271 G 41 41
6 Myanmar 272 A 41 41
7 Myanmar 273 G 41 41
8 Myanmar 274 C 41 41
9 Myanmar 275 C 41 41
10 Myanmar 276 T 41 41
11 Myanmar 277 T 41 41
12 Myanmar 278 G 41 41
13 Myanmar 279 T 41 41
14 Myanmar 280 C 41 41
15 Myanmar 281 C 41 41
16 Myanmar 282 C 41 41
17 Myanmar 283 T 41 41
18 Myanmar 284 G 41 41
19 Myanmar 285 G A 41 40 Gly7Asp
20 Myanmar 286 T 41 41
21 Myanmar 287 T 41 41
22 Myanmar 288 T 41 41
23 Myanmar 289 C 41 41
24 Myanmar 290 A 41 41
25 Myanmar 291 A 41 41
26 Myanmar 292 C 41 41
27 Myanmar 293 G 41 41
28 Myanmar 294 A 41 41
29 Myanmar 295 G 41 41
30 Myanmar 296 A 41 41
31 Myanmar 297 A 41 41
32 Myanmar 298 A 41 41
33 Myanmar 299 A 41 41
34 Myanmar 300 C 41 41
35 Myanmar 301 A 41 41
36 Myanmar 302 C 41 41
37 Myanmar 303 A 41 41
38 Myanmar 304 C 41 41
39 Myanmar 305 G 41 41
40 Myanmar 306 T 41 41
41 Myanmar 307 C 41 41
42 Myanmar 308 C 41 41
43 Myanmar 309 A 41 41
44 Myanmar 310 A 41 41
45 Myanmar 311 C 41 41
46 Myanmar 312 T 41 41
47 Myanmar 313 C 41 41
48 Myanmar 314 A 41 41
49 Myanmar 315 G 41 41
50 Myanmar 316 T 41 41
51 Myanmar 317 T 41 41
52 Myanmar 318 T 41 41
53 Myanmar 319 G 41 41
54 Myanmar 320 C 41 41
55 Myanmar 321 C 41 41
56 Myanmar 322 T 41 41
57 Myanmar 323 G 41 41
58 Myanmar 324 T 41 41
59 Myanmar 325 T 41 41
60 Myanmar 326 T 41 41
61 Myanmar 327 T 41 41
62 Myanmar 328 A 41 41
63 Myanmar 329 C 41 41
64 Myanmar 330 A 41 41
65 Myanmar 331 G 41 41
66 Myanmar 332 G 41 41
67 Myanmar 333 T 41 41
68 Myanmar 334 T 41 41
69 Myanmar 335 C 41 41
70 Myanmar 336 G 41 41
71 Myanmar 337 C 41 41
72 Myanmar 338 G 41 41
73 Myanmar 339 A 41 41
74 Myanmar 340 C 41 41
75 Myanmar 341 G 41 41
76 Myanmar 342 T 41 41
77 Myanmar 343 G 41 41
78 Myanmar 344 C 41 41
79 Myanmar 345 T 41 41
80 Myanmar 346 C 41 41
81 Myanmar 347 G 41 41
82 Myanmar 348 T 41 41
83 Myanmar 349 A 41 41
84 Myanmar 350 C 41 41
85 Myanmar 351 G 41 41
86 Myanmar 352 T 41 41
87 Myanmar 353 G 41 41
88 Myanmar 354 G 41 41
89 Myanmar 355 C 41 41
90 Myanmar 356 T 41 41
91 Myanmar 357 T 41 41
92 Myanmar 358 T 41 41
93 Myanmar 359 G 41 41
94 Myanmar 360 G 41 41
95 Myanmar 361 A 41 41
96 Myanmar 362 G 41 41
97 Myanmar 363 A 41 41
98 Myanmar 364 C 41 41
99 Myanmar 365 T 41 41
100 Myanmar 366 C 41 41
101 Myanmar 367 C 41 41
102 Myanmar 368 G 41 41
103 Myanmar 369 T 41 41
104 Myanmar 370 G 41 41
105 Myanmar 371 G 41 41
106 Myanmar 372 A 41 41
107 Myanmar 373 G T 41 40 Glu36Asp
108 Myanmar 374 G 41 41
109 Myanmar 375 A 41 41
110 Myanmar 376 G 41 41
111 Myanmar 377 G 41 41
112 Myanmar 378 T 41 41
113 Myanmar 379 C 41 41
114 Myanmar 380 T 41 41
115 Myanmar 381 T 41 41
116 Myanmar 382 A 41 41
117 Myanmar 383 T 41 41
118 Myanmar 384 C 41 41
119 Myanmar 385 A 41 41
120 Myanmar 386 G 41 41
121 Myanmar 387 A 41 41
122 Myanmar 388 G 41 41
123 Myanmar 389 G 41 41
124 Myanmar 390 C 41 41
125 Myanmar 391 A 41 41
126 Myanmar 392 C 41 41
127 Myanmar 393 G 41 41
128 Myanmar 394 T 41 41
129 Myanmar 395 C 41 41
130 Myanmar 396 A 41 41
131 Myanmar 397 A 41 41
132 Myanmar 398 C 41 41
133 Myanmar 399 A 41 41
134 Myanmar 400 T 41 41
135 Myanmar 401 C 41 41
136 Myanmar 402 T 41 41
137 Myanmar 403 T 41 41
138 Myanmar 404 A 41 41
139 Myanmar 405 A 41 41
140 Myanmar 406 A 41 41
141 Myanmar 407 G 41 41
142 Myanmar 408 A 41 41
143 Myanmar 409 T 41 41
144 Myanmar 410 G 41 41
145 Myanmar 411 G 41 41
146 Myanmar 412 C 41 41
147 Myanmar 413 A 41 41
148 Myanmar 414 C 41 41
149 Myanmar 415 T 41 41
150 Myanmar 416 T 41 41
151 Myanmar 417 G 41 41
152 Myanmar 418 T 41 41
153 Myanmar 419 G 41 41
154 Myanmar 420 G 41 41
155 Myanmar 421 C 41 41
156 Myanmar 422 T 41 41
157 Myanmar 423 T 41 41
158 Myanmar 424 A 41 41
159 Myanmar 425 G 41 41
160 Myanmar 426 T 41 41
161 Myanmar 427 A 41 41
162 Myanmar 428 G 41 41
163 Myanmar 429 A 41 41
164 Myanmar 430 A 41 41
165 Myanmar 431 G 41 41
166 Myanmar 432 T 41 41
167 Myanmar 433 T 41 41
168 Myanmar 434 G 41 41
169 Myanmar 435 A 41 41
170 Myanmar 436 A 41 41
171 Myanmar 437 A 41 41
172 Myanmar 438 A 41 41
173 Myanmar 439 A 41 41
174 Myanmar 440 G 41 41
175 Myanmar 441 G 41 41
176 Myanmar 442 C 41 41
177 Myanmar 443 G 41 41
178 Myanmar 444 T 41 41
179 Myanmar 445 T 41 41
180 Myanmar 446 T 41 41
181 Myanmar 447 T 41 41
182 Myanmar 448 G 41 41
183 Myanmar 449 C 41 41
184 Myanmar 450 C 41 41
185 Myanmar 451 T 41 41
186 Myanmar 452 C 41 41
187 Myanmar 453 A 41 41
188 Myanmar 454 A 41 41
189 Myanmar 455 C 41 41
190 Myanmar 456 T 41 41
191 Myanmar 457 T 41 41
192 Myanmar 458 G 41 41
193 Myanmar 459 A 41 41
194 Myanmar 460 A 41 41
195 Myanmar 461 C 41 41
196 Myanmar 462 A 41 41
197 Myanmar 463 G 41 41
198 Myanmar 464 C 41 41
199 Myanmar 465 C 41 41
200 Myanmar 466 C 41 41
201 Myanmar 467 T 41 41
202 Myanmar 468 A 41 41
203 Myanmar 469 T 41 41
204 Myanmar 470 G 41 41
205 Myanmar 471 T 41 41
206 Myanmar 472 G 41 41
207 Myanmar 473 T 41 41
208 Myanmar 474 T 41 41
209 Myanmar 475 C 41 41
210 Myanmar 476 A 41 41
211 Myanmar 477 T 41 41
212 Myanmar 478 C 41 41
213 Myanmar 479 A 41 41
214 Myanmar 480 A 41 41
215 Myanmar 481 A 41 41
216 Myanmar 482 C 41 41
217 Myanmar 483 G 41 41
218 Myanmar 484 T 41 41
219 Myanmar 485 T 41 41
220 Myanmar 486 C 41 41
221 Myanmar 487 G 41 41
222 Myanmar 488 G 41 41
223 Myanmar 489 A 41 41
224 Myanmar 490 T 41 41
225 Myanmar 491 G 41 41
226 Myanmar 492 C 41 41
227 Myanmar 493 T 41 41
228 Myanmar 494 C 41 41
229 Myanmar 495 G 41 41
230 Myanmar 496 A 41 41
231 Myanmar 497 A 41 41
232 Myanmar 498 C 41 41
233 Myanmar 499 T 41 41
234 Myanmar 500 G 41 41
235 Myanmar 501 C 41 41
236 Myanmar 502 A 41 41
237 Myanmar 503 C 41 41
238 Myanmar 504 C 41 41
239 Myanmar 505 T 41 41
240 Myanmar 506 C 41 41
241 Myanmar 507 A 41 41
242 Myanmar 508 T 41 41
243 Myanmar 509 G 41 41
244 Myanmar 510 G 41 41
245 Myanmar 511 T 41 41
246 Myanmar 512 C 41 41
247 Myanmar 513 A 41 41
248 Myanmar 514 T 41 41
249 Myanmar 515 G 41 41
250 Myanmar 516 T 41 41
251 Myanmar 517 T 41 41
252 Myanmar 518 A 41 41
253 Myanmar 519 T 41 41
254 Myanmar 520 G 41 41
255 Myanmar 521 G 41 41
256 Myanmar 522 T 41 41
257 Myanmar 523 T 41 41
258 Myanmar 524 G 41 41
259 Myanmar 525 A 41 41
260 Myanmar 526 G 41 41
261 Myanmar 527 C 41 41
262 Myanmar 528 T 41 41
263 Myanmar 529 G 41 41
264 Myanmar 530 G 41 41
265 Myanmar 531 T 41 41
266 Myanmar 532 A 41 41
267 Myanmar 533 G 41 41
268 Myanmar 534 C 41 41
269 Myanmar 535 A 41 41
270 Myanmar 536 G 41 41
271 Myanmar 537 A 41 41
272 Myanmar 538 A 41 41
273 Myanmar 539 C 41 41
274 Myanmar 540 T 41 41
275 Myanmar 541 C 41 41
276 Myanmar 542 G 41 41
277 Myanmar 543 A 41 41
278 Myanmar 544 A 41 41
279 Myanmar 545 G 41 41
280 Myanmar 546 G 41 41
281 Myanmar 547 C 41 41
282 Myanmar 548 A 41 41
283 Myanmar 549 T 41 41
284 Myanmar 550 T 41 41
285 Myanmar 551 C 41 41
286 Myanmar 552 A 41 41
287 Myanmar 553 G 41 41
288 Myanmar 554 T 41 41
289 Myanmar 555 A 41 41
290 Myanmar 556 C 41 41
291 Myanmar 557 G 41 41
292 Myanmar 558 G 41 41
293 Myanmar 559 T 41 41
294 Myanmar 560 C 41 41
295 Myanmar 561 G 41 41
296 Myanmar 562 T 41 41
297 Myanmar 563 A 41 41
298 Myanmar 564 G 41 41
299 Myanmar 565 T 41 41
300 Myanmar 566 G 41 41
301 Myanmar 567 G 41 41
302 Myanmar 568 T 41 41
303 Myanmar 569 G 41 41
304 Myanmar 570 A 41 41
305 Myanmar 571 G 41 41
306 Myanmar 572 A 41 41
307 Myanmar 573 C 41 41
308 Myanmar 574 A 41 41
309 Myanmar 575 C 41 41
310 Myanmar 576 T 41 41
311 Myanmar 577 T 41 41
312 Myanmar 578 G 41 41
313 Myanmar 579 G 41 41
314 Myanmar 580 T 41 41
315 Myanmar 581 G 41 41
316 Myanmar 582 T 41 41
317 Myanmar 583 C 41 41
318 Myanmar 584 C 41 41
319 Myanmar 585 T 41 41
320 Myanmar 586 T 41 41
321 Myanmar 587 G 41 41
322 Myanmar 588 T 41 41
323 Myanmar 589 C 41 41
324 Myanmar 590 C 41 41
325 Myanmar 591 C 41 41
326 Myanmar 592 T 41 41
327 Myanmar 593 C 41 41
328 Myanmar 594 A 41 41
329 Myanmar 595 T 41 41
330 Myanmar 596 G 41 41
331 Myanmar 597 T 41 41
332 Myanmar 598 G 41 41
333 Myanmar 599 G 41 41
334 Myanmar 600 G 41 41
335 Myanmar 601 C 41 41
336 Myanmar 602 G 41 41
337 Myanmar 603 A 41 41
338 Myanmar 604 A 41 41
339 Myanmar 605 A 41 41
340 Myanmar 606 T 41 41
341 Myanmar 607 A 41 41
342 Myanmar 608 C 41 41
343 Myanmar 609 C 41 41
344 Myanmar 610 A 41 41
345 Myanmar 611 G 41 41
346 Myanmar 612 T 41 41
347 Myanmar 613 G 41 41
348 Myanmar 614 G 41 41
349 Myanmar 615 C 41 41
350 Myanmar 616 T 41 41
351 Myanmar 617 T 41 41
352 Myanmar 618 A 41 41
353 Myanmar 619 C 41 41
354 Myanmar 620 C 41 41
355 Myanmar 621 G 41 41
356 Myanmar 622 C 41 41
357 Myanmar 623 A 41 41
358 Myanmar 624 A 41 41
359 Myanmar 625 G 41 41
360 Myanmar 626 G 41 41
361 Myanmar 627 T 41 41
362 Myanmar 628 T 41 41
363 Myanmar 629 C 41 41
364 Myanmar 630 T 41 41
365 Myanmar 631 T 41 41
366 Myanmar 632 C 41 41
367 Myanmar 633 T 41 41
368 Myanmar 634 T 41 41
369 Myanmar 635 C 41 41
370 Myanmar 636 G 41 41
371 Myanmar 637 T 41 41
372 Myanmar 638 A 41 41
373 Myanmar 639 A 41 41
374 Myanmar 640 G 41 41
375 Myanmar 641 A 41 41
376 Myanmar 642 A 41 41
377 Myanmar 643 C 41 41
378 Myanmar 644 G 41 41
379 Myanmar 645 G 41 41
380 Myanmar 646 T 41 41
381 Myanmar 647 A 41 41
382 Myanmar 648 A 41 41
383 Myanmar 649 T 41 41
384 Myanmar 650 A 41 41
385 Myanmar 651 A 41 41
386 Myanmar 652 A 41 41
387 Myanmar 653 G 41 41
388 Myanmar 654 G 41 41
389 Myanmar 655 A 41 41
390 Myanmar 656 G 41 41
391 Myanmar 657 C 41 41
392 Myanmar 658 T 41 41
393 Myanmar 659 G 41 41
394 Myanmar 660 G 41 41
395 Myanmar 661 T 41 41
396 Myanmar 662 G 41 41
397 Myanmar 663 G 41 41
398 Myanmar 664 C 41 41
399 Myanmar 665 C 41 41
400 Myanmar 666 A 41 41
401 Myanmar 667 T 41 41
402 Myanmar 668 A 41 41
403 Myanmar 669 G 41 41
404 Myanmar 670 T 41 41
405 Myanmar 671 T 41 41
406 Myanmar 672 A 41 41
407 Myanmar 673 C 41 41
408 Myanmar 674 G 41 41
409 Myanmar 675 G 41 41
410 Myanmar 676 C 41 41
411 Myanmar 677 G 41 41
412 Myanmar 678 C 41 41
413 Myanmar 679 C 41 41
414 Myanmar 680 G 41 41
415 Myanmar 681 A 41 41
416 Myanmar 682 T 41 41
417 Myanmar 683 C 41 41
418 Myanmar 684 T 41 41
419 Myanmar 685 A 41 41
420 Myanmar 686 A 41 41
421 Myanmar 687 A 41 41
422 Myanmar 688 G 41 41
423 Myanmar 689 T 41 41
424 Myanmar 690 C 41 41
425 Myanmar 691 A 41 41
426 Myanmar 692 T 41 41
427 Myanmar 693 T 41 41
428 Myanmar 694 T 41 41
429 Myanmar 695 G 41 41
430 Myanmar 696 A 41 41
431 Myanmar 697 C 41 41
432 Myanmar 698 T 41 41
433 Myanmar 699 T 41 41
434 Myanmar 700 A 41 41
435 Myanmar 701 G 41 41
436 Myanmar 702 G 41 41
437 Myanmar 703 C 41 41
438 Myanmar 704 G 41 41
439 Myanmar 705 A 41 41
440 Myanmar 706 C 41 41
441 Myanmar 707 G 41 41
442 Myanmar 708 A 41 41
443 Myanmar 709 G 41 41
444 Myanmar 710 C 41 41
445 Myanmar 711 T 41 41
446 Myanmar 712 T 41 41
447 Myanmar 713 G 41 41
448 Myanmar 714 G 41 41
449 Myanmar 715 C 41 41
450 Myanmar 716 A 41 41
451 Myanmar 717 C 41 41
452 Myanmar 718 T 41 41
453 Myanmar 719 G 41 41
454 Myanmar 720 A 41 41
455 Myanmar 721 T 41 41
456 Myanmar 722 C 41 41
457 Myanmar 723 C 41 41
458 Myanmar 724 T 41 41
459 Myanmar 725 T 41 41
460 Myanmar 726 A 41 41
461 Myanmar 727 T 41 41
462 Myanmar 728 G 41 41
463 Myanmar 729 A 41 41
464 Myanmar 730 A 41 41
465 Myanmar 731 G 41 41
466 Myanmar 732 A 41 41
467 Myanmar 733 T 41 41
468 Myanmar 734 T 41 41
469 Myanmar 735 T 41 41
470 Myanmar 736 T 41 41
471 Myanmar 737 C 41 41
472 Myanmar 738 A 41 41
473 Myanmar 739 A 41 41
474 Myanmar 740 G 41 41
475 Myanmar 741 A 41 41
476 Myanmar 742 A 41 41
477 Myanmar 743 A 41 41
478 Myanmar 744 A 41 41
479 Myanmar 745 C 41 41
480 Myanmar 746 T 41 41
481 Myanmar 747 G 41 41
482 Myanmar 748 G 41 41
483 Myanmar 749 A 41 41
484 Myanmar 750 A 41 41
485 Myanmar 751 C 41 41
486 Myanmar 752 A 41 41
487 Myanmar 753 C 41 41
488 Myanmar 754 T 41 41
489 Myanmar 755 A 41 41
490 Myanmar 756 A 41 41
491 Myanmar 757 A 41 41
492 Myanmar 758 C 41 41
493 Myanmar 759 A 41 41
494 Myanmar 760 T 41 41
495 Myanmar 761 A 41 41
496 Myanmar 762 G 41 41
497 Myanmar 763 C 41 41
498 Myanmar 764 A 41 41
499 Myanmar 765 G 41 41
500 Myanmar 766 T 41 41
501 Myanmar 767 G 41 41
502 Myanmar 768 G 41 41
503 Myanmar 769 T 41 41
504 Myanmar 770 G 41 41
505 Myanmar 771 T 41 41
506 Myanmar 772 T 41 41
507 Myanmar 773 A 41 41
508 Myanmar 774 C 41 41
509 Myanmar 775 C 41 41
510 Myanmar 776 C 41 41
511 Myanmar 777 G 41 41
512 Myanmar 778 T 41 41
513 Myanmar 779 G 41 41
514 Myanmar 780 A 41 41
515 Myanmar 781 A 41 41
516 Myanmar 782 C 41 41
517 Myanmar 783 T 41 41
518 Myanmar 784 C T 41 38 Leu173Leu
519 Myanmar 785 A 41 41
520 Myanmar 786 T 41 41
521 Myanmar 787 G 41 41
522 Myanmar 788 C 41 41
523 Myanmar 789 G 41 41
524 Myanmar 790 T 41 41
525 Myanmar 791 G 41 41
526 Myanmar 792 A 41 41
527 Myanmar 793 G 41 41
528 Myanmar 794 C 41 41
529 Myanmar 795 T 41 41
530 Myanmar 796 T 41 41
531 Myanmar 797 A 41 41
532 Myanmar 798 A 41 41
533 Myanmar 799 C 41 41
534 Myanmar 800 G 41 41
535 Myanmar 801 G 41 41
536 Myanmar 802 A 41 41
537 Myanmar 803 G 41 41
538 Myanmar 804 G 41 41
539 Myanmar 805 G 41 41