National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
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Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   540                                        
?                                            
A   21     1                           1      
C   3                                        
D   27                                        
E   54                                        
F   15                                        
G   66                                        
H   21             1                          
I   9                                        
K   27                                        
L   63                   2                    
M   9                                   1    
N   18                                        
P   24                                        
Q   21                                        
R   30                                        
S   30                                        
T   21                                        
V   63     1             1               2    
W   3                                        
Y   15                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Lithuania 266 A 234 234
1 Lithuania 267 T 234 234
2 Lithuania 268 G 234 234
3 Lithuania 269 G 234 234
4 Lithuania 270 A 234 234
5 Lithuania 271 G 234 234
6 Lithuania 272 A 234 234
7 Lithuania 273 G 234 234
8 Lithuania 274 C 234 234
9 Lithuania 275 C 234 234
10 Lithuania 276 T 234 234
11 Lithuania 277 T 234 234
12 Lithuania 278 G 234 234
13 Lithuania 279 T 234 234
14 Lithuania 280 C 234 234
15 Lithuania 281 C 234 234
16 Lithuania 282 C 234 234
17 Lithuania 283 T 234 234
18 Lithuania 284 G 234 234
19 Lithuania 285 G 234 234
20 Lithuania 286 T 234 234
21 Lithuania 287 T 234 234
22 Lithuania 288 T 234 234
23 Lithuania 289 C 234 234
24 Lithuania 290 A 234 234
25 Lithuania 291 A 234 233
26 Lithuania 292 C 234 233
27 Lithuania 293 G 234 234
28 Lithuania 294 A 234 234
29 Lithuania 295 G 234 234
30 Lithuania 296 A 234 233
31 Lithuania 297 A 234 233
32 Lithuania 298 A 234 233
33 Lithuania 299 A 234 233
34 Lithuania 300 C 234 234
35 Lithuania 301 A 234 234
36 Lithuania 302 C 234 234
37 Lithuania 303 A 234 234
38 Lithuania 304 C 234 234
39 Lithuania 305 G 234 234
40 Lithuania 306 T 234 234
41 Lithuania 307 C 234 234
42 Lithuania 308 C 234 234
43 Lithuania 309 A 234 234
44 Lithuania 310 A 234 234
45 Lithuania 311 C 234 234
46 Lithuania 312 T 234 234
47 Lithuania 313 C 234 234
48 Lithuania 314 A 234 234
49 Lithuania 315 G 234 234
50 Lithuania 316 T 234 234
51 Lithuania 317 T 234 234
52 Lithuania 318 T 234 234
53 Lithuania 319 G 234 234
54 Lithuania 320 C 234 234
55 Lithuania 321 C 234 234
56 Lithuania 322 T 234 234
57 Lithuania 323 G 234 234
58 Lithuania 324 T 234 234
59 Lithuania 325 T 234 234
60 Lithuania 326 T 234 234
61 Lithuania 327 T 234 234
62 Lithuania 328 A 234 234
63 Lithuania 329 C 234 234
64 Lithuania 330 A 234 234
65 Lithuania 331 G 234 234
66 Lithuania 332 G 234 234
67 Lithuania 333 T 234 234
68 Lithuania 334 T 234 234
69 Lithuania 335 C 234 234
70 Lithuania 336 G 234 234
71 Lithuania 337 C 234 234
72 Lithuania 338 G 234 234
73 Lithuania 339 A 234 234
74 Lithuania 340 C 234 234
75 Lithuania 341 G 234 234
76 Lithuania 342 T 234 234
77 Lithuania 343 G 234 234
78 Lithuania 344 C 234 234
79 Lithuania 345 T 234 234
80 Lithuania 346 C 234 234
81 Lithuania 347 G 234 234
82 Lithuania 348 T 234 234
83 Lithuania 349 A 234 234
84 Lithuania 350 C 234 234
85 Lithuania 351 G 234 234
86 Lithuania 352 T 234 234
87 Lithuania 353 G 234 234
88 Lithuania 354 G 234 234
89 Lithuania 355 C 234 234
90 Lithuania 356 T 234 234
91 Lithuania 357 T 234 234
92 Lithuania 358 T 234 234
93 Lithuania 359 G 234 234
94 Lithuania 360 G 234 234
95 Lithuania 361 A 234 234
96 Lithuania 362 G 234 234
97 Lithuania 363 A 234 234
98 Lithuania 364 C 234 234
99 Lithuania 365 T 234 234
100 Lithuania 366 C 234 234
101 Lithuania 367 C 234 234
102 Lithuania 368 G T 234 233 Val35Leu
103 Lithuania 369 T 234 234
104 Lithuania 370 G 234 234
105 Lithuania 371 G 234 234
106 Lithuania 372 A 234 234
107 Lithuania 373 G 234 234
108 Lithuania 374 G 234 234
109 Lithuania 375 A 234 234
110 Lithuania 376 G 234 234
111 Lithuania 377 G 234 234
112 Lithuania 378 T 234 234
113 Lithuania 379 C 234 234
114 Lithuania 380 T 234 234
115 Lithuania 381 T 234 234
116 Lithuania 382 A 234 234
117 Lithuania 383 T 234 234
118 Lithuania 384 C 234 234
119 Lithuania 385 A 234 234
120 Lithuania 386 G 234 234
121 Lithuania 387 A 234 234
122 Lithuania 388 G 234 234
123 Lithuania 389 G 234 234
124 Lithuania 390 C 234 234
125 Lithuania 391 A 234 234
126 Lithuania 392 C 234 234
127 Lithuania 393 G 234 234
128 Lithuania 394 T 234 234
129 Lithuania 395 C 234 234
130 Lithuania 396 A 234 234
131 Lithuania 397 A 234 234
132 Lithuania 398 C 234 234
133 Lithuania 399 A 234 234
134 Lithuania 400 T 234 234
135 Lithuania 401 C 235 235
136 Lithuania 402 T 235 235
137 Lithuania 403 T 235 235
138 Lithuania 404 A 235 235
139 Lithuania 405 A 235 235
140 Lithuania 406 A 235 235
141 Lithuania 407 G 235 235
142 Lithuania 408 A 235 235
143 Lithuania 409 T 235 235
144 Lithuania 410 G 235 235
145 Lithuania 411 G 235 235
146 Lithuania 412 C 235 235
147 Lithuania 413 A 235 235
148 Lithuania 414 C 235 235
149 Lithuania 415 T 235 235
150 Lithuania 416 T 235 235
151 Lithuania 417 G 235 235
152 Lithuania 418 T 235 235
153 Lithuania 419 G 235 235
154 Lithuania 420 G 235 235
155 Lithuania 421 C 235 235
156 Lithuania 422 T 235 235
157 Lithuania 423 T 235 235
158 Lithuania 424 A 235 235
159 Lithuania 425 G 235 235
160 Lithuania 426 T 235 235
161 Lithuania 427 A 235 235
162 Lithuania 428 G 235 235
163 Lithuania 429 A 235 235
164 Lithuania 430 A 235 235
165 Lithuania 431 G 235 235
166 Lithuania 432 T 235 235
167 Lithuania 433 T 235 235
168 Lithuania 434 G 235 235
169 Lithuania 435 A 235 235
170 Lithuania 436 A 235 235
171 Lithuania 437 A 235 235
172 Lithuania 438 A 235 235
173 Lithuania 439 A 235 235
174 Lithuania 440 G 235 235
175 Lithuania 441 G 235 235
176 Lithuania 442 C 235 235
177 Lithuania 443 G 235 235
178 Lithuania 444 T 235 235
179 Lithuania 445 T C 235 167 Val60Val
180 Lithuania 446 T 235 235
181 Lithuania 447 T 235 235
182 Lithuania 448 G 235 235
183 Lithuania 449 C 235 235
184 Lithuania 450 C 235 235
185 Lithuania 451 T 235 235
186 Lithuania 452 C 235 235
187 Lithuania 453 A 235 235
188 Lithuania 454 A 235 235
189 Lithuania 455 C 235 235
190 Lithuania 456 T 235 235
191 Lithuania 457 T 235 235
192 Lithuania 458 G 235 235
193 Lithuania 459 A 235 235
194 Lithuania 460 A 235 235
195 Lithuania 461 C 235 235
196 Lithuania 462 A 235 235
197 Lithuania 463 G 235 235
198 Lithuania 464 C 235 235
199 Lithuania 465 C 235 235
200 Lithuania 466 C 235 235
201 Lithuania 467 T 235 235
202 Lithuania 468 A 235 235
203 Lithuania 469 T 235 235
204 Lithuania 470 G 235 235
205 Lithuania 471 T 235 235
206 Lithuania 472 G 235 235
207 Lithuania 473 T 235 235
208 Lithuania 474 T 235 235
209 Lithuania 475 C 235 235
210 Lithuania 476 A 235 235
211 Lithuania 477 T 235 235
212 Lithuania 478 C 235 235
213 Lithuania 479 A 235 235
214 Lithuania 480 A 235 235
215 Lithuania 481 A 235 235
216 Lithuania 482 C 235 235
217 Lithuania 483 G 235 235
218 Lithuania 484 T 235 235
219 Lithuania 485 T 235 235
220 Lithuania 486 C 235 235
221 Lithuania 487 G 235 235
222 Lithuania 488 G 235 235
223 Lithuania 489 A 235 235
224 Lithuania 490 T 235 235
225 Lithuania 491 G 235 235
226 Lithuania 492 C 235 235
227 Lithuania 493 T 235 235
228 Lithuania 494 C 235 235
229 Lithuania 495 G 235 235
230 Lithuania 496 A 235 235
231 Lithuania 497 A 235 235
232 Lithuania 498 C 235 235
233 Lithuania 499 T 235 235
234 Lithuania 500 G 235 235
235 Lithuania 501 C 235 235
236 Lithuania 502 A 235 235
237 Lithuania 503 C 235 235
238 Lithuania 504 C 235 235
239 Lithuania 505 T 235 235
240 Lithuania 506 C 235 235
241 Lithuania 507 A 235 235
242 Lithuania 508 T 235 235
243 Lithuania 509 G 235 235
244 Lithuania 510 G 235 235
245 Lithuania 511 T 235 235
246 Lithuania 512 C 234 234
247 Lithuania 513 A 234 234
248 Lithuania 514 T C 235 234 His83His
249 Lithuania 515 G 235 235
250 Lithuania 516 T A 235 234 Val84Asp
251 Lithuania 517 T 235 235
252 Lithuania 518 A G 235 234 Met85Val
253 Lithuania 519 T 235 235
254 Lithuania 520 G 235 235
255 Lithuania 521 G 235 235
256 Lithuania 522 T 235 235
257 Lithuania 523 T 235 235
258 Lithuania 524 G 235 235
259 Lithuania 525 A 235 235
260 Lithuania 526 G 235 235
261 Lithuania 527 C T 235 234 Leu88Leu
262 Lithuania 528 T 235 235
263 Lithuania 529 G 235 235
264 Lithuania 530 G 235 235
265 Lithuania 531 T 235 235
266 Lithuania 532 A 235 235
267 Lithuania 533 G 235 235
268 Lithuania 534 C 235 235
269 Lithuania 535 A 235 235
270 Lithuania 536 G 235 235
271 Lithuania 537 A 235 235
272 Lithuania 538 A 235 235
273 Lithuania 539 C 235 235
274 Lithuania 540 T 235 235
275 Lithuania 541 C 235 235
276 Lithuania 542 G 235 235
277 Lithuania 543 A 235 235
278 Lithuania 544 A 235 235
279 Lithuania 545 G 235 235
280 Lithuania 546 G 235 235
281 Lithuania 547 C 235 235
282 Lithuania 548 A 235 235
283 Lithuania 549 T 235 235
284 Lithuania 550 T 235 234
285 Lithuania 551 C 235 234
286 Lithuania 552 A 235 234
287 Lithuania 553 G 235 234
288 Lithuania 554 T 235 234
289 Lithuania 555 A 235 235
290 Lithuania 556 C 235 235
291 Lithuania 557 G 235 235
292 Lithuania 558 G 235 235
293 Lithuania 559 T 235 235
294 Lithuania 560 C 235 235
295 Lithuania 561 G 235 235
296 Lithuania 562 T 235 235
297 Lithuania 563 A 235 235
298 Lithuania 564 G 235 235
299 Lithuania 565 T 235 235
300 Lithuania 566 G 235 235
301 Lithuania 567 G 235 235
302 Lithuania 568 T 235 235
303 Lithuania 569 G 235 235
304 Lithuania 570 A 235 235
305 Lithuania 571 G 235 235
306 Lithuania 572 A 235 235
307 Lithuania 573 C 235 235
308 Lithuania 574 A 235 235
309 Lithuania 575 C 235 235
310 Lithuania 576 T 235 235
311 Lithuania 577 T 235 235
312 Lithuania 578 G 235 234
313 Lithuania 579 G 235 234
314 Lithuania 580 T 235 234
315 Lithuania 581 G 235 234
316 Lithuania 582 T 235 234
317 Lithuania 583 C 235 234
318 Lithuania 584 C 235 234
319 Lithuania 585 T 235 234
320 Lithuania 586 T 235 234
321 Lithuania 587 G 235 234
322 Lithuania 588 T 235 234
323 Lithuania 589 C 235 235
324 Lithuania 590 C 235 235
325 Lithuania 591 C 235 235
326 Lithuania 592 T 235 235
327 Lithuania 593 C 235 235
328 Lithuania 594 A 235 235
329 Lithuania 595 T 235 235
330 Lithuania 596 G 235 235
331 Lithuania 597 T 235 235
332 Lithuania 598 G 235 235
333 Lithuania 599 G 235 235
334 Lithuania 600 G 235 235
335 Lithuania 601 C 235 235
336 Lithuania 602 G 235 235
337 Lithuania 603 A 235 235
338 Lithuania 604 A 235 235
339 Lithuania 605 A 235 235
340 Lithuania 606 T 235 235
341 Lithuania 607 A 235 235
342 Lithuania 608 C 235 235
343 Lithuania 609 C 235 235
344 Lithuania 610 A 235 235
345 Lithuania 611 G 235 235
346 Lithuania 612 T 235 235
347 Lithuania 613 G 235 235
348 Lithuania 614 G 235 235
349 Lithuania 615 C A 235 234 Ala117Asp
350 Lithuania 616 T 235 235
351 Lithuania 617 T 235 235
352 Lithuania 618 A 235 235
353 Lithuania 619 C 235 235
354 Lithuania 620 C 235 235
355 Lithuania 621 G 235 235
356 Lithuania 622 C 235 235
357 Lithuania 623 A 235 235
358 Lithuania 624 A 235 235
359 Lithuania 625 G 235 235
360 Lithuania 626 G 235 235
361 Lithuania 627 T 235 235
362 Lithuania 628 T 235 235
363 Lithuania 629 C 235 235
364 Lithuania 630 T 235 235
365 Lithuania 631 T 235 235
366 Lithuania 632 C 235 235
367 Lithuania 633 T 235 235
368 Lithuania 634 T 235 235
369 Lithuania 635 C 235 235
370 Lithuania 636 G 235 235
371 Lithuania 637 T 235 235
372 Lithuania 638 A 235 235
373 Lithuania 639 A 235 235
374 Lithuania 640 G 235 235
375 Lithuania 641 A 235 235
376 Lithuania 642 A 235 235
377 Lithuania 643 C 235 235
378 Lithuania 644 G 235 235
379 Lithuania 645 G 235 235
380 Lithuania 646 T 235 235
381 Lithuania 647 A 235 235
382 Lithuania 648 A 235 235
383 Lithuania 649 T 235 235
384 Lithuania 650 A 235 235
385 Lithuania 651 A 235 235
386 Lithuania 652 A 235 235
387 Lithuania 653 G 235 235
388 Lithuania 654 G 235 235
389 Lithuania 655 A 235 235
390 Lithuania 656 G A 235 234 Ala131Thr
391 Lithuania 657 C 235 235
392 Lithuania 658 T 235 235
393 Lithuania 659 G 235 235
394 Lithuania 660 G 235 235
395 Lithuania 661 T 235 235
396 Lithuania 662 G 235 235
397 Lithuania 663 G 235 235
398 Lithuania 664 C 235 235
399 Lithuania 665 C 235 235
400 Lithuania 666 A 235 235
401 Lithuania 667 T 235 235
402 Lithuania 668 A 235 235
403 Lithuania 669 G 235 235
404 Lithuania 670 T 235 235
405 Lithuania 671 T 235 235
406 Lithuania 672 A 235 235
407 Lithuania 673 C 235 235
408 Lithuania 674 G 235 235
409 Lithuania 675 G 235 235
410 Lithuania 676 C 235 235
411 Lithuania 677 G 235 235
412 Lithuania 678 C 235 235
413 Lithuania 679 C 235 235
414 Lithuania 680 G 235 235
415 Lithuania 681 A 235 235
416 Lithuania 682 T 235 235
417 Lithuania 683 C T 235 234 Leu140Leu
418 Lithuania 684 T 235 235
419 Lithuania 685 A 235 235
420 Lithuania 686 A 235 235
421 Lithuania 687 A 235 235
422 Lithuania 688 G 235 235
423 Lithuania 689 T 235 235
424 Lithuania 690 C 235 235
425 Lithuania 691 A 235 235
426 Lithuania 692 T 235 235
427 Lithuania 693 T 235 235
428 Lithuania 694 T 235 235
429 Lithuania 695 G 235 235
430 Lithuania 696 A 235 235
431 Lithuania 697 C 235 235
432 Lithuania 698 T 235 235
433 Lithuania 699 T 235 235
434 Lithuania 700 A 235 235
435 Lithuania 701 G 235 235
436 Lithuania 702 G 235 235
437 Lithuania 703 C 235 235
438 Lithuania 704 G 235 235
439 Lithuania 705 A 235 235
440 Lithuania 706 C 235 235
441 Lithuania 707 G 235 235
442 Lithuania 708 A 235 235
443 Lithuania 709 G 235 235
444 Lithuania 710 C 235 235
445 Lithuania 711 T 235 235
446 Lithuania 712 T 235 235
447 Lithuania 713 G 235 235
448 Lithuania 714 G 235 235
449 Lithuania 715 C 235 235
450 Lithuania 716 A 235 235
451 Lithuania 717 C 235 235
452 Lithuania 718 T 235 235
453 Lithuania 719 G 235 235
454 Lithuania 720 A 235 235
455 Lithuania 721 T 235 235
456 Lithuania 722 C 235 235
457 Lithuania 723 C 235 235
458 Lithuania 724 T 235 235
459 Lithuania 725 T 235 235
460 Lithuania 726 A 235 235
461 Lithuania 727 T 235 235
462 Lithuania 728 G 235 235
463 Lithuania 729 A 235 235
464 Lithuania 730 A 235 235
465 Lithuania 731 G 235 235
466 Lithuania 732 A 235 235
467 Lithuania 733 T 235 235
468 Lithuania 734 T 235 235
469 Lithuania 735 T 235 235
470 Lithuania 736 T 235 235
471 Lithuania 737 C 235 235
472 Lithuania 738 A 235 235
473 Lithuania 739 A 235 235
474 Lithuania 740 G 235 235
475 Lithuania 741 A 235 235
476 Lithuania 742 A 235 235
477 Lithuania 743 A 235 235
478 Lithuania 744 A 235 235
479 Lithuania 745 C 235 235
480 Lithuania 746 T 235 235
481 Lithuania 747 G 235 235
482 Lithuania 748 G 235 235
483 Lithuania 749 A 235 235
484 Lithuania 750 A 235 235
485 Lithuania 751 C 235 235
486 Lithuania 752 A 235 235
487 Lithuania 753 C 235 235
488 Lithuania 754 T 235 235
489 Lithuania 755 A 235 235
490 Lithuania 756 A 235 235
491 Lithuania 757 A 235 235
492 Lithuania 758 C 235 235
493 Lithuania 759 A 235 235
494 Lithuania 760 T 235 235
495 Lithuania 761 A 235 235
496 Lithuania 762 G 235 235
497 Lithuania 763 C 235 235
498 Lithuania 764 A 235 235
499 Lithuania 765 G 235 235
500 Lithuania 766 T 235 235
501 Lithuania 767 G 235 235
502 Lithuania 768 G 235 235
503 Lithuania 769 T 235 235
504 Lithuania 770 G 235 235
505 Lithuania 771 T 235 235
506 Lithuania 772 T C 235 231 Val169Val
507 Lithuania 773 A 235 235
508 Lithuania 774 C 235 235
509 Lithuania 775 C 235 235
510 Lithuania 776 C 235 235
511 Lithuania 777 G 235 235
512 Lithuania 778 T 235 235
513 Lithuania 779 G 235 235
514 Lithuania 780 A 235 235
515 Lithuania 781 A 235 235
516 Lithuania 782 C 235 235
517 Lithuania 783 T 235 235
518 Lithuania 784 C 235 235
519 Lithuania 785 A 235 235
520 Lithuania 786 T 235 235
521 Lithuania 787 G 235 235
522 Lithuania 788 C 235 235
523 Lithuania 789 G 235 235
524 Lithuania 790 T 235 235
525 Lithuania 791 G 235 235
526 Lithuania 792 A 235 235
527 Lithuania 793 G 235 235
528 Lithuania 794 C 235 235
529 Lithuania 795 T 235 235
530 Lithuania 796 T 235 235
531 Lithuania 797 A 235 235
532 Lithuania 798 A 235 235
533 Lithuania 799 C 235 235
534 Lithuania 800 G 235 235
535 Lithuania 801 G 235 235
536 Lithuania 802 A 235 235
537 Lithuania 803 G 235 235
538 Lithuania 804 G 235 235
539 Lithuania 805 G 235 235