National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   540                                        
?                                            
A   21                                        
C   3                                        
D   27                                        
E   54                                        
F   15                                        
G   66                                        
H   21                                        
I   9                                        
K   27                                        
L   63                   1                    
M   9                                        
N   18                                        
P   24                                        
Q   21                             1          
R   30                                        
S   30                                        
T   21                                        
V   63                   1                    
W   3                                        
Y   15                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Lebanon 266 A 23 23
1 Lebanon 267 T 23 23
2 Lebanon 268 G 23 23
3 Lebanon 269 G 23 23
4 Lebanon 270 A 23 23
5 Lebanon 271 G 23 23
6 Lebanon 272 A 23 23
7 Lebanon 273 G 23 23
8 Lebanon 274 C 23 23
9 Lebanon 275 C 23 23
10 Lebanon 276 T 23 23
11 Lebanon 277 T 23 23
12 Lebanon 278 G 23 23
13 Lebanon 279 T 23 23
14 Lebanon 280 C 23 23
15 Lebanon 281 C 23 23
16 Lebanon 282 C 23 23
17 Lebanon 283 T 23 23
18 Lebanon 284 G 23 23
19 Lebanon 285 G 23 23
20 Lebanon 286 T 23 23
21 Lebanon 287 T 23 23
22 Lebanon 288 T 23 23
23 Lebanon 289 C 23 23
24 Lebanon 290 A 23 23
25 Lebanon 291 A 23 23
26 Lebanon 292 C 23 23
27 Lebanon 293 G 23 23
28 Lebanon 294 A 23 23
29 Lebanon 295 G 23 23
30 Lebanon 296 A 23 23
31 Lebanon 297 A 23 23
32 Lebanon 298 A 23 23
33 Lebanon 299 A 23 23
34 Lebanon 300 C 23 23
35 Lebanon 301 A 23 23
36 Lebanon 302 C 23 23
37 Lebanon 303 A 23 23
38 Lebanon 304 C 23 23
39 Lebanon 305 G 23 23
40 Lebanon 306 T 23 23
41 Lebanon 307 C 23 23
42 Lebanon 308 C 23 23
43 Lebanon 309 A 23 23
44 Lebanon 310 A 23 23
45 Lebanon 311 C 23 23
46 Lebanon 312 T 23 23
47 Lebanon 313 C T 23 22 Leu16Leu
48 Lebanon 314 A 23 23
49 Lebanon 315 G 23 23
50 Lebanon 316 T 23 23
51 Lebanon 317 T 23 23
52 Lebanon 318 T 23 23
53 Lebanon 319 G 23 23
54 Lebanon 320 C 23 23
55 Lebanon 321 C 23 23
56 Lebanon 322 T 23 23
57 Lebanon 323 G 23 23
58 Lebanon 324 T 23 23
59 Lebanon 325 T 23 23
60 Lebanon 326 T 23 23
61 Lebanon 327 T 23 23
62 Lebanon 328 A 23 23
63 Lebanon 329 C 23 23
64 Lebanon 330 A G 23 22 Gln22Arg
65 Lebanon 331 G 23 23
66 Lebanon 332 G 23 23
67 Lebanon 333 T 23 23
68 Lebanon 334 T 23 23
69 Lebanon 335 C 23 23
70 Lebanon 336 G 23 23
71 Lebanon 337 C 23 23
72 Lebanon 338 G 23 23
73 Lebanon 339 A 23 23
74 Lebanon 340 C 23 23
75 Lebanon 341 G 23 23
76 Lebanon 342 T 23 23
77 Lebanon 343 G 23 23
78 Lebanon 344 C 23 23
79 Lebanon 345 T 23 23
80 Lebanon 346 C 23 23
81 Lebanon 347 G 23 23
82 Lebanon 348 T 23 23
83 Lebanon 349 A 23 23
84 Lebanon 350 C 23 23
85 Lebanon 351 G 23 23
86 Lebanon 352 T 23 23
87 Lebanon 353 G 23 23
88 Lebanon 354 G 23 23
89 Lebanon 355 C 23 23
90 Lebanon 356 T 23 23
91 Lebanon 357 T 23 23
92 Lebanon 358 T 23 23
93 Lebanon 359 G 23 23
94 Lebanon 360 G 23 23
95 Lebanon 361 A 23 23
96 Lebanon 362 G 23 23
97 Lebanon 363 A 23 23
98 Lebanon 364 C 23 23
99 Lebanon 365 T 23 23
100 Lebanon 366 C 23 23
101 Lebanon 367 C 23 23
102 Lebanon 368 G 23 23
103 Lebanon 369 T 23 23
104 Lebanon 370 G 23 23
105 Lebanon 371 G 23 23
106 Lebanon 372 A 23 23
107 Lebanon 373 G 23 23
108 Lebanon 374 G 23 23
109 Lebanon 375 A 23 23
110 Lebanon 376 G 23 23
111 Lebanon 377 G 23 23
112 Lebanon 378 T 23 23
113 Lebanon 379 C 23 23
114 Lebanon 380 T 23 23
115 Lebanon 381 T 23 23
116 Lebanon 382 A 23 23
117 Lebanon 383 T 23 23
118 Lebanon 384 C 23 23
119 Lebanon 385 A 23 23
120 Lebanon 386 G 23 23
121 Lebanon 387 A 23 23
122 Lebanon 388 G 23 23
123 Lebanon 389 G 23 23
124 Lebanon 390 C 23 23
125 Lebanon 391 A 23 23
126 Lebanon 392 C 23 23
127 Lebanon 393 G 23 23
128 Lebanon 394 T 23 23
129 Lebanon 395 C 23 23
130 Lebanon 396 A 23 23
131 Lebanon 397 A 23 23
132 Lebanon 398 C 23 23
133 Lebanon 399 A 23 23
134 Lebanon 400 T 23 23
135 Lebanon 401 C 23 23
136 Lebanon 402 T 23 23
137 Lebanon 403 T 23 23
138 Lebanon 404 A 23 23
139 Lebanon 405 A 23 23
140 Lebanon 406 A 23 23
141 Lebanon 407 G 23 23
142 Lebanon 408 A 23 23
143 Lebanon 409 T 23 23
144 Lebanon 410 G 23 23
145 Lebanon 411 G 23 23
146 Lebanon 412 C 23 23
147 Lebanon 413 A 23 23
148 Lebanon 414 C 23 23
149 Lebanon 415 T 23 23
150 Lebanon 416 T 23 23
151 Lebanon 417 G 23 23
152 Lebanon 418 T 23 23
153 Lebanon 419 G 23 23
154 Lebanon 420 G 23 23
155 Lebanon 421 C 23 23
156 Lebanon 422 T 23 23
157 Lebanon 423 T 23 23
158 Lebanon 424 A 23 23
159 Lebanon 425 G T 23 22 Val54Leu
160 Lebanon 426 T 23 23
161 Lebanon 427 A 23 23
162 Lebanon 428 G 23 23
163 Lebanon 429 A 23 23
164 Lebanon 430 A 23 23
165 Lebanon 431 G 23 23
166 Lebanon 432 T 23 23
167 Lebanon 433 T 23 23
168 Lebanon 434 G 23 23
169 Lebanon 435 A 23 23
170 Lebanon 436 A 23 23
171 Lebanon 437 A 23 23
172 Lebanon 438 A 23 23
173 Lebanon 439 A 23 23
174 Lebanon 440 G 23 23
175 Lebanon 441 G 23 23
176 Lebanon 442 C 23 23
177 Lebanon 443 G 23 23
178 Lebanon 444 T 23 23
179 Lebanon 445 T 23 23
180 Lebanon 446 T 23 23
181 Lebanon 447 T 23 23
182 Lebanon 448 G 23 23
183 Lebanon 449 C 23 23
184 Lebanon 450 C 23 23
185 Lebanon 451 T 23 23
186 Lebanon 452 C 23 23
187 Lebanon 453 A 23 23
188 Lebanon 454 A 23 23
189 Lebanon 455 C 23 23
190 Lebanon 456 T 23 23
191 Lebanon 457 T 23 23
192 Lebanon 458 G 23 23
193 Lebanon 459 A 23 23
194 Lebanon 460 A 23 23
195 Lebanon 461 C 23 23
196 Lebanon 462 A 23 23
197 Lebanon 463 G 23 23
198 Lebanon 464 C 23 23
199 Lebanon 465 C 23 23
200 Lebanon 466 C 23 23
201 Lebanon 467 T 23 23
202 Lebanon 468 A 23 23
203 Lebanon 469 T 23 23
204 Lebanon 470 G 23 23
205 Lebanon 471 T 23 23
206 Lebanon 472 G 23 23
207 Lebanon 473 T 23 23
208 Lebanon 474 T 23 23
209 Lebanon 475 C 23 23
210 Lebanon 476 A 23 23
211 Lebanon 477 T 23 23
212 Lebanon 478 C 23 23
213 Lebanon 479 A 23 23
214 Lebanon 480 A 23 23
215 Lebanon 481 A 23 23
216 Lebanon 482 C 23 23
217 Lebanon 483 G 23 23
218 Lebanon 484 T 23 23
219 Lebanon 485 T 23 23
220 Lebanon 486 C 23 23
221 Lebanon 487 G 23 23
222 Lebanon 488 G 23 23
223 Lebanon 489 A 23 23
224 Lebanon 490 T 23 23
225 Lebanon 491 G 23 23
226 Lebanon 492 C 23 23
227 Lebanon 493 T 23 23
228 Lebanon 494 C 23 23
229 Lebanon 495 G 23 23
230 Lebanon 496 A 23 23
231 Lebanon 497 A 23 23
232 Lebanon 498 C 23 23
233 Lebanon 499 T 23 23
234 Lebanon 500 G 23 23
235 Lebanon 501 C 23 23
236 Lebanon 502 A 23 23
237 Lebanon 503 C 23 23
238 Lebanon 504 C 23 23
239 Lebanon 505 T 23 23
240 Lebanon 506 C 23 23
241 Lebanon 507 A 23 23
242 Lebanon 508 T 23 23
243 Lebanon 509 G 23 23
244 Lebanon 510 G 23 23
245 Lebanon 511 T 23 23
246 Lebanon 512 C 23 23
247 Lebanon 513 A 23 23
248 Lebanon 514 T 23 23
249 Lebanon 515 G 23 23
250 Lebanon 516 T 23 23
251 Lebanon 517 T 23 23
252 Lebanon 518 A 23 23
253 Lebanon 519 T 23 23
254 Lebanon 520 G 23 23
255 Lebanon 521 G 23 23
256 Lebanon 522 T 23 23
257 Lebanon 523 T 23 23
258 Lebanon 524 G 23 23
259 Lebanon 525 A 23 23
260 Lebanon 526 G 23 23
261 Lebanon 527 C 23 23
262 Lebanon 528 T 23 23
263 Lebanon 529 G 23 23
264 Lebanon 530 G 23 23
265 Lebanon 531 T 23 23
266 Lebanon 532 A 23 23
267 Lebanon 533 G 23 23
268 Lebanon 534 C 23 23
269 Lebanon 535 A 23 23
270 Lebanon 536 G 23 23
271 Lebanon 537 A 23 23
272 Lebanon 538 A 23 23
273 Lebanon 539 C 23 23
274 Lebanon 540 T 23 23
275 Lebanon 541 C 23 23
276 Lebanon 542 G 23 23
277 Lebanon 543 A 23 23
278 Lebanon 544 A 23 23
279 Lebanon 545 G 23 23
280 Lebanon 546 G 23 23
281 Lebanon 547 C 23 23
282 Lebanon 548 A 23 23
283 Lebanon 549 T 23 23
284 Lebanon 550 T 23 23
285 Lebanon 551 C 23 23
286 Lebanon 552 A 23 23
287 Lebanon 553 G 23 23
288 Lebanon 554 T 23 23
289 Lebanon 555 A 23 23
290 Lebanon 556 C 23 23
291 Lebanon 557 G 23 23
292 Lebanon 558 G 23 23
293 Lebanon 559 T 23 23
294 Lebanon 560 C 23 23
295 Lebanon 561 G 23 23
296 Lebanon 562 T 23 23
297 Lebanon 563 A 23 23
298 Lebanon 564 G 23 23
299 Lebanon 565 T 23 23
300 Lebanon 566 G 23 23
301 Lebanon 567 G 23 23
302 Lebanon 568 T 23 23
303 Lebanon 569 G 23 23
304 Lebanon 570 A 23 23
305 Lebanon 571 G 23 23
306 Lebanon 572 A 23 23
307 Lebanon 573 C 23 23
308 Lebanon 574 A 23 23
309 Lebanon 575 C 23 23
310 Lebanon 576 T 23 23
311 Lebanon 577 T 23 23
312 Lebanon 578 G 23 23
313 Lebanon 579 G 23 23
314 Lebanon 580 T 23 23
315 Lebanon 581 G 23 23
316 Lebanon 582 T 23 23
317 Lebanon 583 C 23 23
318 Lebanon 584 C 23 23
319 Lebanon 585 T 23 23
320 Lebanon 586 T 23 23
321 Lebanon 587 G 23 23
322 Lebanon 588 T 23 23
323 Lebanon 589 C 23 23
324 Lebanon 590 C 23 23
325 Lebanon 591 C 23 23
326 Lebanon 592 T 23 23
327 Lebanon 593 C 23 23
328 Lebanon 594 A 23 23
329 Lebanon 595 T 23 23
330 Lebanon 596 G 23 23
331 Lebanon 597 T 23 23
332 Lebanon 598 G 23 23
333 Lebanon 599 G 23 23
334 Lebanon 600 G 23 23
335 Lebanon 601 C 23 23
336 Lebanon 602 G 23 23
337 Lebanon 603 A 23 23
338 Lebanon 604 A 23 23
339 Lebanon 605 A 23 23
340 Lebanon 606 T 23 23
341 Lebanon 607 A 23 23
342 Lebanon 608 C 23 23
343 Lebanon 609 C 23 23
344 Lebanon 610 A 23 23
345 Lebanon 611 G 23 23
346 Lebanon 612 T 23 23
347 Lebanon 613 G 23 23
348 Lebanon 614 G 23 23
349 Lebanon 615 C 23 23
350 Lebanon 616 T 23 23
351 Lebanon 617 T 23 23
352 Lebanon 618 A 23 23
353 Lebanon 619 C 23 23
354 Lebanon 620 C 23 23
355 Lebanon 621 G 23 23
356 Lebanon 622 C 23 23
357 Lebanon 623 A 23 23
358 Lebanon 624 A 23 23
359 Lebanon 625 G 23 23
360 Lebanon 626 G 23 23
361 Lebanon 627 T 23 23
362 Lebanon 628 T 23 23
363 Lebanon 629 C 23 23
364 Lebanon 630 T 23 23
365 Lebanon 631 T 23 23
366 Lebanon 632 C 23 23
367 Lebanon 633 T 23 23
368 Lebanon 634 T 23 23
369 Lebanon 635 C 23 23
370 Lebanon 636 G 23 23
371 Lebanon 637 T 23 23
372 Lebanon 638 A 23 23
373 Lebanon 639 A 23 23
374 Lebanon 640 G 23 23
375 Lebanon 641 A 23 23
376 Lebanon 642 A 23 23
377 Lebanon 643 C 23 23
378 Lebanon 644 G 23 23
379 Lebanon 645 G 23 23
380 Lebanon 646 T 23 23
381 Lebanon 647 A 23 23
382 Lebanon 648 A 23 23
383 Lebanon 649 T 23 23
384 Lebanon 650 A 23 23
385 Lebanon 651 A 23 23
386 Lebanon 652 A 23 23
387 Lebanon 653 G 23 23
388 Lebanon 654 G 23 23
389 Lebanon 655 A 23 23
390 Lebanon 656 G 23 23
391 Lebanon 657 C 23 23
392 Lebanon 658 T 23 23
393 Lebanon 659 G 23 23
394 Lebanon 660 G 23 23
395 Lebanon 661 T 23 23
396 Lebanon 662 G 23 23
397 Lebanon 663 G 23 23
398 Lebanon 664 C 23 23
399 Lebanon 665 C 23 23
400 Lebanon 666 A 23 23
401 Lebanon 667 T 23 23
402 Lebanon 668 A 23 23
403 Lebanon 669 G 23 23
404 Lebanon 670 T 23 23
405 Lebanon 671 T 23 23
406 Lebanon 672 A 23 23
407 Lebanon 673 C 23 23
408 Lebanon 674 G 23 23
409 Lebanon 675 G 23 23
410 Lebanon 676 C 23 23
411 Lebanon 677 G 23 23
412 Lebanon 678 C 23 23
413 Lebanon 679 C 23 23
414 Lebanon 680 G 23 23
415 Lebanon 681 A 23 23
416 Lebanon 682 T 23 23
417 Lebanon 683 C 23 23
418 Lebanon 684 T 23 23
419 Lebanon 685 A 23 23
420 Lebanon 686 A 23 23
421 Lebanon 687 A 23 23
422 Lebanon 688 G 23 23
423 Lebanon 689 T 23 23
424 Lebanon 690 C 23 23
425 Lebanon 691 A 23 23
426 Lebanon 692 T 23 23
427 Lebanon 693 T 23 23
428 Lebanon 694 T 23 23
429 Lebanon 695 G 23 23
430 Lebanon 696 A 23 23
431 Lebanon 697 C 23 23
432 Lebanon 698 T 23 23
433 Lebanon 699 T 23 23
434 Lebanon 700 A 23 23
435 Lebanon 701 G 23 23
436 Lebanon 702 G 23 23
437 Lebanon 703 C 23 23
438 Lebanon 704 G 23 23
439 Lebanon 705 A 23 23
440 Lebanon 706 C 23 23
441 Lebanon 707 G 23 23
442 Lebanon 708 A 23 23
443 Lebanon 709 G 23 23
444 Lebanon 710 C 23 23
445 Lebanon 711 T 23 23
446 Lebanon 712 T 23 23
447 Lebanon 713 G 23 23
448 Lebanon 714 G 23 23
449 Lebanon 715 C 23 23
450 Lebanon 716 A 23 23
451 Lebanon 717 C 23 23
452 Lebanon 718 T 23 23
453 Lebanon 719 G 23 23
454 Lebanon 720 A 23 23
455 Lebanon 721 T 23 23
456 Lebanon 722 C 23 23
457 Lebanon 723 C 23 23
458 Lebanon 724 T 23 23
459 Lebanon 725 T 23 23
460 Lebanon 726 A 23 23
461 Lebanon 727 T 23 23
462 Lebanon 728 G 23 23
463 Lebanon 729 A 23 23
464 Lebanon 730 A 23 23
465 Lebanon 731 G 23 23
466 Lebanon 732 A 23 23
467 Lebanon 733 T 23 23
468 Lebanon 734 T 23 23
469 Lebanon 735 T 23 23
470 Lebanon 736 T 23 23
471 Lebanon 737 C 23 23
472 Lebanon 738 A 23 23
473 Lebanon 739 A 23 23
474 Lebanon 740 G 23 23
475 Lebanon 741 A 23 23
476 Lebanon 742 A 23 23
477 Lebanon 743 A 23 23
478 Lebanon 744 A 23 23
479 Lebanon 745 C 23 23
480 Lebanon 746 T 23 23
481 Lebanon 747 G 23 23
482 Lebanon 748 G 23 23
483 Lebanon 749 A 23 23
484 Lebanon 750 A 23 23
485 Lebanon 751 C 23 23
486 Lebanon 752 A 23 23
487 Lebanon 753 C 23 23
488 Lebanon 754 T 23 23
489 Lebanon 755 A 23 23
490 Lebanon 756 A 23 23
491 Lebanon 757 A 23 23
492 Lebanon 758 C 23 23
493 Lebanon 759 A 23 23
494 Lebanon 760 T 23 23
495 Lebanon 761 A 23 23
496 Lebanon 762 G 23 23
497 Lebanon 763 C 23 23
498 Lebanon 764 A 23 23
499 Lebanon 765 G 23 23
500 Lebanon 766 T 23 23
501 Lebanon 767 G 23 23
502 Lebanon 768 G 23 23
503 Lebanon 769 T 23 23
504 Lebanon 770 G 23 23
505 Lebanon 771 T 23 23
506 Lebanon 772 T 23 23
507 Lebanon 773 A 23 23
508 Lebanon 774 C 23 23
509 Lebanon 775 C 23 23
510 Lebanon 776 C 23 23
511 Lebanon 777 G 23 23
512 Lebanon 778 T 23 23
513 Lebanon 779 G 23 23
514 Lebanon 780 A 23 23
515 Lebanon 781 A 23 23
516 Lebanon 782 C 23 23
517 Lebanon 783 T 23 23
518 Lebanon 784 C 23 23
519 Lebanon 785 A 23 23
520 Lebanon 786 T 23 23
521 Lebanon 787 G 23 23
522 Lebanon 788 C 23 23
523 Lebanon 789 G 23 23
524 Lebanon 790 T 23 23
525 Lebanon 791 G 23 23
526 Lebanon 792 A 23 23
527 Lebanon 793 G 23 23
528 Lebanon 794 C 23 23
529 Lebanon 795 T 23 23
530 Lebanon 796 T 23 23
531 Lebanon 797 A 23 23
532 Lebanon 798 A 23 23
533 Lebanon 799 C 23 23
534 Lebanon 800 G 23 23
535 Lebanon 801 G 23 23
536 Lebanon 802 A 23 23
537 Lebanon 803 G 23 23
538 Lebanon 804 G 23 23
539 Lebanon 805 G 23 23